BLASTX nr result
ID: Catharanthus23_contig00009217
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00009217
(1956 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 92 2e-38
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 92 2e-38
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 92 2e-38
ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer ar... 85 1e-34
ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, par... 96 7e-29
ref|XP_002317406.1| predicted protein [Populus trichocarpa] 62 3e-28
ref|XP_004509642.1| PREDICTED: genome polyprotein-like [Cicer ar... 78 5e-28
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part... 80 4e-25
ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Popu... 89 4e-25
gb|AAD37341.1|AF140604_5 reverse transcriptase [Cauliflower mosa... 69 6e-24
ref|XP_002318395.1| predicted protein [Populus trichocarpa] 89 1e-23
gb|AGT42056.1| reverse transcriptase [Cauliflower mosaic virus] ... 67 2e-23
sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Inclu... 67 3e-23
sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Inclu... 67 3e-23
gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus] 67 3e-23
gb|AGT42189.1| reverse transcriptase [Cauliflower mosaic virus] 67 3e-23
gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus] 67 3e-23
gb|AGT42147.1| reverse transcriptase [Cauliflower mosaic virus] ... 67 3e-23
gb|AGT42140.1| reverse transcriptase [Cauliflower mosaic virus] 67 3e-23
gb|AGT42112.1| reverse transcriptase [Cauliflower mosaic virus] 67 3e-23
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 91.7 bits (226), Expect(3) = 2e-38
Identities = 42/92 (45%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLS---NVIKEYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DILL S ++ +H +LL+ +++ +GIM+S +K +A ++ LGM GHY+PG ++
Sbjct: 1497 DILLFSGSHDDHHRLLNQFYDIVHSHGIMLSAKKSTIATDTIEFLGMIIKDGHYQPGKHV 1556
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIP 377
A+ELL FP++ L+ KQVQ+FLGI+NY+ +FIP
Sbjct: 1557 AQELLHFPDQQLSKKQVQQFLGIINYIRDFIP 1588
Score = 64.7 bits (156), Expect(3) = 2e-38
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 17/87 (19%)
Frame = +1
Query: 586 KKDYCGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAY------ 747
K+ +C ASG FK E +YH +K+IL VKY IKKF +HLI H FLI D S++
Sbjct: 1659 KRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEFHLISHTFLINMDNSSFPRIFDF 1718
Query: 748 -----------HSSTTVSQYSFEVHHI 795
+ T ++Y F V HI
Sbjct: 1719 KNKLLLDKQLLNLKTWFAKYDFTVQHI 1745
Score = 52.8 bits (125), Expect(3) = 2e-38
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +2
Query: 401 LTKMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQTLSARKRILQTDATDKY*GATLIEDL 580
L+ +L K PP W T A+ T K +N P K+ILQTDA+D+Y A L+E+
Sbjct: 1597 LSALLKKKPPEWNDDHTNAVTTLKKIAQNPPPKHQTHPTKKILQTDASDQYWSAVLLEEH 1656
Query: 581 DGKK 592
+GK+
Sbjct: 1657 NGKR 1660
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 91.7 bits (226), Expect(3) = 2e-38
Identities = 42/92 (45%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLS---NVIKEYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DILL S ++ +H +LL+ +++ +GIM+S +K +A ++ LGM GHY+PG ++
Sbjct: 1484 DILLFSGSHDDHHRLLNQFYDIVHSHGIMLSAKKSTIATDTIEFLGMIIKDGHYQPGKHV 1543
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIP 377
A+ELL FP++ L+ KQVQ+FLGI+NY+ +FIP
Sbjct: 1544 AQELLHFPDQQLSKKQVQQFLGIINYIRDFIP 1575
Score = 64.7 bits (156), Expect(3) = 2e-38
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 17/87 (19%)
Frame = +1
Query: 586 KKDYCGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAY------ 747
K+ +C ASG FK E +YH +K+IL VKY IKKF +HLI H FLI D S++
Sbjct: 1646 KRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEFHLISHTFLINMDNSSFPRIFDF 1705
Query: 748 -----------HSSTTVSQYSFEVHHI 795
+ T ++Y F V HI
Sbjct: 1706 KNKLLLDKQLLNLKTWFAKYDFTVQHI 1732
Score = 52.8 bits (125), Expect(3) = 2e-38
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +2
Query: 401 LTKMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQTLSARKRILQTDATDKY*GATLIEDL 580
L+ +L K PP W T A+ T K +N P K+ILQTDA+D+Y A L+E+
Sbjct: 1584 LSALLKKKPPEWNDDHTNAVTTLKKIAQNPPPKHQTHPTKKILQTDASDQYWSAVLLEEH 1643
Query: 581 DGKK 592
+GK+
Sbjct: 1644 NGKR 1647
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 91.7 bits (226), Expect(3) = 2e-38
Identities = 42/92 (45%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLS---NVIKEYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DILL S ++ +H +LL+ +++ +GIM+S +K +A ++ LGM GHY+PG ++
Sbjct: 1386 DILLFSGSHDDHHRLLNQFYDIVHSHGIMLSAKKSTIATDTIEFLGMIIKDGHYQPGKHV 1445
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIP 377
A+ELL FP++ L+ KQVQ+FLGI+NY+ +FIP
Sbjct: 1446 AQELLHFPDQQLSKKQVQQFLGIINYIRDFIP 1477
Score = 64.7 bits (156), Expect(3) = 2e-38
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 17/87 (19%)
Frame = +1
Query: 586 KKDYCGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAY------ 747
K+ +C ASG FK E +YH +K+IL VKY IKKF +HLI H FLI D S++
Sbjct: 1548 KRHFCAHASGQFKHSEKNYHVIYKEILTVKYGIKKFEFHLISHTFLINMDNSSFPRIFDF 1607
Query: 748 -----------HSSTTVSQYSFEVHHI 795
+ T ++Y F V HI
Sbjct: 1608 KNKLLLDKQLLNLKTWFAKYDFTVQHI 1634
Score = 52.8 bits (125), Expect(3) = 2e-38
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +2
Query: 401 LTKMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQTLSARKRILQTDATDKY*GATLIEDL 580
L+ +L K PP W T A+ T K +N P K+ILQTDA+D+Y A L+E+
Sbjct: 1486 LSALLKKKPPEWNDDHTNAVTTLKKIAQNPPPKHQTHPTKKILQTDASDQYWSAVLLEEH 1545
Query: 581 DGKK 592
+GK+
Sbjct: 1546 NGKR 1549
>ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 181
Score = 84.7 bits (208), Expect(3) = 1e-34
Identities = 39/79 (49%), Positives = 57/79 (72%)
Frame = +3
Query: 186 MVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYIAEELLKFPEENLTVKQVQRFLGIVNYL* 365
M+S++K LAQ + LG+ F QG ++P +IA+ELL FP+ENLT+KQ+Q+FLGI+NY+
Sbjct: 1 MLSKKKRQLAQTKIDFLGIHFSQGKFQPQPHIAQELLNFPDENLTIKQIQQFLGIINYIR 60
Query: 366 EFIPAQLKTFMPLLKCLAR 422
FIP K PL + L++
Sbjct: 61 NFIPKLAKYTSPLSQLLSK 79
Score = 58.5 bits (140), Expect(3) = 1e-34
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +1
Query: 589 KDYCGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHF 720
K YCG ASG FK+ E HYH+T+K+ LAVK I+ F++HL G+ F
Sbjct: 136 KHYCGHASGQFKEAEKHYHTTYKEALAVKLGIQNFDFHLRGYQF 179
Score = 53.1 bits (126), Expect(3) = 1e-34
Identities = 28/64 (43%), Positives = 38/64 (59%)
Frame = +2
Query: 401 LTKMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQTLSARKRILQTDATDKY*GATLIEDL 580
L+++LSK+P PW T+A+ K P L+ KRILQTDA+D Y G LIE++
Sbjct: 73 LSQLLSKNPSPWKPKHTEAVKALKRIAHTPPALKIPGNGKRILQTDASDHYWGTILIEEI 132
Query: 581 DGKK 592
G K
Sbjct: 133 KGIK 136
>ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, partial [Eutrema
salsugineum] gi|557097093|gb|ESQ37601.1| hypothetical
protein EUTSA_v100029341mg, partial [Eutrema
salsugineum]
Length = 735
Score = 95.9 bits (237), Expect(3) = 7e-29
Identities = 45/104 (43%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
Frame = +3
Query: 120 LVSTTYPEHLQLL---SNVIKEYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYIAEE 290
L+ T EH++ L +++EYGIM+S RKM++AQ ++ LGM+ +G + P ++A
Sbjct: 574 LLHTAEEEHIRSLRQFQGIVEEYGIMLSARKMIIAQPNIDFLGMQITEGRFTPQAHLATA 633
Query: 291 LLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPLLKCLAR 422
LL FP+ENLT +QVQ+FLG++NY+ +FIP + PL K L +
Sbjct: 634 LLDFPDENLTRRQVQQFLGVINYISDFIPQLSQITRPLQKMLTK 677
Score = 50.4 bits (119), Expect(3) = 7e-29
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 401 LTKMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQTLSARKRILQTDATD 547
L KML+K+PP W QT+A+ + K ++ +P L+ S RILQTDATD
Sbjct: 671 LQKMLTKNPPTWATKQTEAVKSLKREIQKLPPLKIPSTGLRILQTDATD 719
Score = 30.4 bits (67), Expect(3) = 7e-29
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 5 KWRVMPFDLKTAQSLFQK 58
+W V+PF LKTA SLFQ+
Sbjct: 548 QWNVLPFGLKTAPSLFQQ 565
>ref|XP_002317406.1| predicted protein [Populus trichocarpa]
Length = 409
Score = 62.4 bits (150), Expect(3) = 3e-28
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +1
Query: 598 CGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAY 747
CG+ SG FK+ E HYHS F +ILAVKY I+KF +HL +HF + + S++
Sbjct: 222 CGYKSGSFKESETHYHSIFMEILAVKYGIQKFEFHLAAYHFTVIMNYSSF 271
Score = 57.4 bits (137), Expect(3) = 3e-28
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = +2
Query: 377 RTVKDIHALTKMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQTLSARKRILQTDATDKY* 556
R + L ML KD PWT+ QTQA+ K+ +N+ L S RILQTDA D+Y
Sbjct: 148 RVAQMTRPLQLMLKKDADPWTEKQTQAVRQLKTTTQNLSTLVIPSTGHRILQTDANDQYW 207
Query: 557 GATLIEDLDGKKII 598
L+ED +G + I
Sbjct: 208 SVVLLEDKNGHRHI 221
Score = 55.1 bits (131), Expect(3) = 3e-28
Identities = 29/50 (58%), Positives = 33/50 (66%)
Frame = +3
Query: 255 GHYKPGTYIAEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
G Y PG +IAEEL KF + LT KQVQ+FLGIV YL FIP + PL
Sbjct: 107 GAYTPGAHIAEELQKFSDGPLTRKQVQQFLGIVQYLRNFIPRVAQMTRPL 156
>ref|XP_004509642.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 168
Score = 77.8 bits (190), Expect(3) = 5e-28
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 186 MVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYIAEELLKFPEENLTVKQVQRFLGIVNYL* 365
M+ ++K +AQ + LGM F QG Y+P ++A+ELL F +ENLTVKQ+Q+FLGI+NY+
Sbjct: 1 MLFEKKSHIAQIEIDFLGMHFSQGKYQPQPHVAKELLNFLDENLTVKQIQQFLGIINYIR 60
Query: 366 EFIPAQLKTFMPLLKCLAR 422
FIP + PL + L +
Sbjct: 61 NFIPRLARYTSPLSQLLRK 79
Score = 53.1 bits (126), Expect(3) = 5e-28
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +2
Query: 401 LTKMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQTLSARKRILQTDATDKY*GATLIEDL 580
L+++L K+PPPW T A+ K + P L+ KR LQTD +D Y GA LIE++
Sbjct: 73 LSQLLRKNPPPWDPKHTDAVKALKRIAQTPPALKIPRNGKRTLQTDVSDHYRGAVLIEEI 132
Query: 581 DGKK 592
+G K
Sbjct: 133 NGVK 136
Score = 43.1 bits (100), Expect(3) = 5e-28
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 589 KDYCGFASG*FKDLEIHYHSTFKKILAVKY 678
K YCG A G FK+ E HYH+T+K+ LAV Y
Sbjct: 136 KHYCGHACGQFKEAEKHYHTTYKEALAVNY 165
>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
gi|557090298|gb|ESQ31006.1| hypothetical protein
EUTSA_v10012231mg, partial [Eutrema salsugineum]
Length = 1904
Score = 77.0 bits (188), Expect(2) = 4e-25
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 17/87 (19%)
Frame = +1
Query: 586 KKDYCGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAYHS---- 753
K+ CG+ SG FKD E HYHST+K+ILAVK I+KF H++G HFLIE DMS++
Sbjct: 1553 KRSICGYKSGVFKDSEKHYHSTYKEILAVKRGIEKFESHIVGQHFLIEMDMSSFSKMIQF 1612
Query: 754 -------------STTVSQYSFEVHHI 795
++ SQ+ F+V HI
Sbjct: 1613 KQKILPQAQLLRWASWFSQWKFDVKHI 1639
Score = 67.0 bits (162), Expect(2) = 4e-25
Identities = 61/204 (29%), Positives = 89/204 (43%), Gaps = 5/204 (2%)
Frame = +2
Query: 2 YKWRVMPFDLKTAQSLFQKV*SGSSSPSFTQ-ISYILRYLVSLDYIP*ASPVTFQRY*GI 178
++W+VMPF LK A SLFQK + P + YI L+ I + + + + +
Sbjct: 1353 FQWKVMPFGLKVAPSLFQKAMTKIFEPILPNALVYIDDILLFSPDIDSHTRLLEKFHKIV 1412
Query: 179 WHYGVT---KKNGLGPAEC*FTRNGICARPLQARNLYC*RIVEIPRRKPYCQTGSTIPWY 349
YG+ KK +G E F I + ++ E P K +
Sbjct: 1413 QQYGIMLSEKKMAIGETEIDFIGMHISKGQYHLQPHIATQLNEFPDDKLSFKQVQQFLGV 1472
Query: 350 CELSLRIYSRTVKDIHALTKMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQTLSARKRIL 529
K L+ L KD PPW + T+A+ K + +P+L+ S KRIL
Sbjct: 1473 VNYMAEFIHGLAKYRSILSTQLKKDAPPWDERCTEAVKELKRISKTLPSLKIPSKGKRIL 1532
Query: 530 QTDATDKY*GATLIE-DLDGKKII 598
QTDA+D Y GA L+E D GK+ I
Sbjct: 1533 QTDASDCYWGAVLLEKDEKGKRSI 1556
Score = 80.1 bits (196), Expect = 3e-12
Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLSN---VIKEYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DILL S H +LL ++++YGIM+S++KM + + + +GM +G Y +I
Sbjct: 1390 DILLFSPDIDSHTRLLEKFHKIVQQYGIMLSEKKMAIGETEIDFIGMHISKGQYHLQPHI 1449
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFI 374
A +L +FP++ L+ KQVQ+FLG+VNY+ EFI
Sbjct: 1450 ATQLNEFPDDKLSFKQVQQFLGVVNYMAEFI 1480
>ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Populus trichocarpa]
gi|550326181|gb|ERP54440.1| hypothetical protein
POPTR_0012s01890g [Populus trichocarpa]
Length = 1153
Score = 88.6 bits (218), Expect(3) = 4e-25
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEH---LQLLSNVIKEYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
D+LL S H LQ + ++ ++GIM+S+ KM++ Q+ + LGM F G Y PGT+I
Sbjct: 1003 DVLLFSKDEESHATLLQQFAELVHQHGIMLSESKMLICQKEIEFLGMVFADGAYTPGTHI 1062
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
AEEL KF + L+ KQVQ+FLGIV YL FIP + PL
Sbjct: 1063 AEELQKFSDGPLSRKQVQQFLGIVQYLRNFIPRVAQMTRPL 1103
Score = 50.4 bits (119), Expect(3) = 4e-25
Identities = 26/59 (44%), Positives = 34/59 (57%)
Frame = +2
Query: 377 RTVKDIHALTKMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQTLSARKRILQTDATDKY 553
R + L ML KD PWT+ QT A+ K+ +N+P L S RILQTDA+D+Y
Sbjct: 1095 RVAQMTRPLQLMLKKDADPWTEKQTHAVRQLKTATQNLPALVIPSTGHRILQTDASDQY 1153
Score = 25.0 bits (53), Expect(3) = 4e-25
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 40 PIFVSKGMIRIVKPILHTNLVYIE 111
P+ K MI++ +P+L + VYI+
Sbjct: 979 PLLFQKAMIKVFEPMLPSAFVYID 1002
>gb|AAD37341.1|AF140604_5 reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 68.6 bits (166), Expect(4) = 6e-24
Identities = 36/101 (35%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLSNVIK---EYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DIL+ S T +HL ++ +++ ++GI++S++K L ++ ++ LG+E +G +KP +I
Sbjct: 399 DILVFSNTEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHI 458
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
E + KFP+ KQ+QRFLGI+ Y ++IP + PL
Sbjct: 459 LEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPL 499
Score = 50.1 bits (118), Expect(4) = 6e-24
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Frame = +1
Query: 598 CGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAYHS-------- 753
C +ASG FK E +YHS K+ LAV IKKF+ +L HFLI D + + S
Sbjct: 571 CRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 630
Query: 754 ----------STTVSQYSFEVHHI 795
+S YSF+V HI
Sbjct: 631 DSKLGRNIRWQAWLSHYSFDVEHI 654
Score = 30.8 bits (68), Expect(4) = 6e-24
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 KMLSKDPPPWTQAQTQAILT*KSRLRNIPNL-QTLSARKRILQTDATDKY*GATL 568
K+ P WT+ T + K L+ P L + L K I++TDA+D Y G L
Sbjct: 502 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHRPLPEEKLIIETDASDDYWGGML 556
Score = 30.0 bits (66), Expect(4) = 6e-24
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 2 YKWRVMPFDLKTAQSLFQK 58
Y+W V+PF LK A S+FQ+
Sbjct: 362 YEWNVVPFGLKQAPSIFQR 380
>ref|XP_002318395.1| predicted protein [Populus trichocarpa]
Length = 1497
Score = 88.6 bits (218), Expect(2) = 1e-23
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEH---LQLLSNVIKEYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
D+LL S H LQ + ++ ++GIM+S+ KM++ Q+ + LGM F G Y PGT+I
Sbjct: 1347 DVLLFSKDEESHATLLQQFAELVHQHGIMLSESKMLICQKEIEFLGMVFADGAYTPGTHI 1406
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
AEEL KF + L+ KQVQ+FLGIV YL FIP + PL
Sbjct: 1407 AEELQKFSDGPLSRKQVQQFLGIVQYLRNFIPRVAQMTRPL 1447
Score = 50.4 bits (119), Expect(2) = 1e-23
Identities = 26/59 (44%), Positives = 34/59 (57%)
Frame = +2
Query: 377 RTVKDIHALTKMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQTLSARKRILQTDATDKY 553
R + L ML KD PWT+ QT A+ K+ +N+P L S RILQTDA+D+Y
Sbjct: 1439 RVAQMTRPLQLMLKKDADPWTEKQTHAVRQLKTATQNLPALVIPSTGHRILQTDASDQY 1497
>gb|AGT42056.1| reverse transcriptase [Cauliflower mosaic virus]
gi|530722419|gb|AGT42084.1| reverse transcriptase
[Cauliflower mosaic virus]
Length = 675
Score = 66.6 bits (161), Expect(4) = 2e-23
Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLSNVIK---EYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DIL+ S +HL ++ +++ ++GI++S++K L ++ ++ LG+E +G +KP +I
Sbjct: 400 DILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHI 459
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
E + KFP+ KQ+QRFLGI+ Y ++IP + PL
Sbjct: 460 LEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPL 500
Score = 50.4 bits (119), Expect(4) = 2e-23
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Frame = +1
Query: 598 CGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAYHS-------- 753
C +ASG FK E +YHS K+ LAV IKKF+ +L HFLI D + + S
Sbjct: 572 CRYASGSFKTAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 631
Query: 754 ----------STTVSQYSFEVHHI 795
+S YSF+V HI
Sbjct: 632 DSKLGRNIRWQAWLSHYSFDVEHI 655
Score = 30.4 bits (67), Expect(4) = 2e-23
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 KMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQ-TLSARKRILQTDATDKY*GATL 568
K+ P WT+ T + K L+ P L L K I++TDA+D Y G L
Sbjct: 503 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGML 557
Score = 30.0 bits (66), Expect(4) = 2e-23
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 2 YKWRVMPFDLKTAQSLFQK 58
Y+W V+PF LK A S+FQ+
Sbjct: 363 YEWNVVPFGLKQAPSIFQR 381
>sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase gi|293185|gb|AAA62375.1| reverse
transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 66.6 bits (161), Expect(4) = 3e-23
Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLSNVIK---EYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DIL+ S +HL ++ +++ ++GI++S++K L ++ ++ LG+E +G +KP +I
Sbjct: 404 DILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHI 463
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
E + KFP+ KQ+QRFLGI+ Y ++IP + PL
Sbjct: 464 LEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPL 504
Score = 50.1 bits (118), Expect(4) = 3e-23
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Frame = +1
Query: 598 CGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAYHS-------- 753
C +ASG FK E +YHS K+ LAV IKKF+ +L HFLI D + + S
Sbjct: 576 CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 635
Query: 754 ----------STTVSQYSFEVHHI 795
+S YSF+V HI
Sbjct: 636 DSKLGRNIRWQAWLSHYSFDVEHI 659
Score = 30.4 bits (67), Expect(4) = 3e-23
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 KMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQ-TLSARKRILQTDATDKY*GATL 568
K+ P WT+ T + K L+ P L L K I++TDA+D Y G L
Sbjct: 507 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGML 561
Score = 30.0 bits (66), Expect(4) = 3e-23
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 2 YKWRVMPFDLKTAQSLFQK 58
Y+W V+PF LK A S+FQ+
Sbjct: 367 YEWNVVPFGLKQAPSIFQR 385
>sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
Length = 679
Score = 66.6 bits (161), Expect(4) = 3e-23
Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLSNVIK---EYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DIL+ S +HL ++ +++ ++GI++S++K L ++ ++ LG+E +G +KP +I
Sbjct: 404 DILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHI 463
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
E + KFP+ KQ+QRFLGI+ Y ++IP + PL
Sbjct: 464 LEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPL 504
Score = 50.1 bits (118), Expect(4) = 3e-23
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Frame = +1
Query: 598 CGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAYHS-------- 753
C +ASG FK E +YHS K+ LAV IKKF+ +L HFLI D + + S
Sbjct: 576 CRYASGSFKAAERNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 635
Query: 754 ----------STTVSQYSFEVHHI 795
+S YSF+V HI
Sbjct: 636 DSKLGRNIRWQAWLSHYSFDVEHI 659
Score = 30.4 bits (67), Expect(4) = 3e-23
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 KMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQ-TLSARKRILQTDATDKY*GATL 568
K+ P WT+ T + K L+ P L L K I++TDA+D Y G L
Sbjct: 507 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGML 561
Score = 30.0 bits (66), Expect(4) = 3e-23
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 2 YKWRVMPFDLKTAQSLFQK 58
Y+W V+PF LK A S+FQ+
Sbjct: 367 YEWNVVPFGLKQAPSIFQR 385
>gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 66.6 bits (161), Expect(4) = 3e-23
Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLSNVIK---EYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DIL+ S +HL ++ +++ ++GI++S++K L ++ ++ LG+E +G +KP +I
Sbjct: 404 DILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHI 463
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
E + KFP+ KQ+QRFLGI+ Y ++IP + PL
Sbjct: 464 LEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPL 504
Score = 50.1 bits (118), Expect(4) = 3e-23
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Frame = +1
Query: 598 CGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAYHS-------- 753
C +ASG FK E +YHS K+ LAV IKKF+ +L HFLI D + + S
Sbjct: 576 CRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 635
Query: 754 ----------STTVSQYSFEVHHI 795
+S YSF+V HI
Sbjct: 636 DSKLGRNIRWQAWLSHYSFDVEHI 659
Score = 30.4 bits (67), Expect(4) = 3e-23
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 KMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQ-TLSARKRILQTDATDKY*GATL 568
K+ P WT+ T + K L+ P L L K I++TDA+D Y G L
Sbjct: 507 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGML 561
Score = 30.0 bits (66), Expect(4) = 3e-23
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 2 YKWRVMPFDLKTAQSLFQK 58
Y+W V+PF LK A S+FQ+
Sbjct: 367 YEWNVVPFGLKQAPSIFQR 385
>gb|AGT42189.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 66.6 bits (161), Expect(4) = 3e-23
Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLSNVIK---EYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DIL+ S +HL ++ +++ ++GI++S++K L ++ ++ LG+E +G +KP +I
Sbjct: 400 DILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHI 459
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
E + KFP+ KQ+QRFLGI+ Y ++IP + PL
Sbjct: 460 LEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPL 500
Score = 50.1 bits (118), Expect(4) = 3e-23
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Frame = +1
Query: 598 CGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAYHS-------- 753
C +ASG FK E +YHS K+ LAV IKKF+ +L HFLI D + + S
Sbjct: 572 CRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 631
Query: 754 ----------STTVSQYSFEVHHI 795
+S YSF+V HI
Sbjct: 632 DSKLGRNIRWQAWLSHYSFDVEHI 655
Score = 30.4 bits (67), Expect(4) = 3e-23
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 KMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQ-TLSARKRILQTDATDKY*GATL 568
K+ P WT+ T + K L+ P L L K I++TDA+D Y G L
Sbjct: 503 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGML 557
Score = 30.0 bits (66), Expect(4) = 3e-23
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 2 YKWRVMPFDLKTAQSLFQK 58
Y+W V+PF LK A S+FQ+
Sbjct: 363 YEWNVVPFGLKQAPSIFQR 381
>gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 66.6 bits (161), Expect(4) = 3e-23
Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLSNVIK---EYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DIL+ S +HL ++ +++ ++GI++S++K L ++ ++ LG+E +G +KP +I
Sbjct: 400 DILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHI 459
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
E + KFP+ KQ+QRFLGI+ Y ++IP + PL
Sbjct: 460 LEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPL 500
Score = 50.1 bits (118), Expect(4) = 3e-23
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Frame = +1
Query: 598 CGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAYHS-------- 753
C +ASG FK E +YHS K+ LAV IKKF+ +L HFLI D + + S
Sbjct: 572 CRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 631
Query: 754 ----------STTVSQYSFEVHHI 795
+S YSF+V HI
Sbjct: 632 DSKLGRNIRWQAWLSHYSFDVEHI 655
Score = 30.4 bits (67), Expect(4) = 3e-23
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 KMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQ-TLSARKRILQTDATDKY*GATL 568
K+ P WT+ T + K L+ P L L K I++TDA+D Y G L
Sbjct: 503 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGML 557
Score = 30.0 bits (66), Expect(4) = 3e-23
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 2 YKWRVMPFDLKTAQSLFQK 58
Y+W V+PF LK A S+FQ+
Sbjct: 363 YEWNVVPFGLKQAPSIFQR 381
>gb|AGT42147.1| reverse transcriptase [Cauliflower mosaic virus]
gi|530722499|gb|AGT42154.1| reverse transcriptase
[Cauliflower mosaic virus]
Length = 675
Score = 66.6 bits (161), Expect(4) = 3e-23
Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLSNVIK---EYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DIL+ S +HL ++ +++ ++GI++S++K L ++ ++ LG+E +G +KP +I
Sbjct: 400 DILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHI 459
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
E + KFP+ KQ+QRFLGI+ Y ++IP + PL
Sbjct: 460 LEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPL 500
Score = 50.1 bits (118), Expect(4) = 3e-23
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Frame = +1
Query: 598 CGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAYHS-------- 753
C +ASG FK E +YHS K+ LAV IKKF+ +L HFLI D + + S
Sbjct: 572 CRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 631
Query: 754 ----------STTVSQYSFEVHHI 795
+S YSF+V HI
Sbjct: 632 DSKLGRNIRWQAWLSHYSFDVEHI 655
Score = 30.4 bits (67), Expect(4) = 3e-23
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 KMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQ-TLSARKRILQTDATDKY*GATL 568
K+ P WT+ T + K L+ P L L K I++TDA+D Y G L
Sbjct: 503 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGML 557
Score = 30.0 bits (66), Expect(4) = 3e-23
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 2 YKWRVMPFDLKTAQSLFQK 58
Y+W V+PF LK A S+FQ+
Sbjct: 363 YEWNVVPFGLKQAPSIFQR 381
>gb|AGT42140.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 66.6 bits (161), Expect(4) = 3e-23
Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLSNVIK---EYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DIL+ S +HL ++ +++ ++GI++S++K L ++ ++ LG+E +G +KP +I
Sbjct: 400 DILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHI 459
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
E + KFP+ KQ+QRFLGI+ Y ++IP + PL
Sbjct: 460 LEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPL 500
Score = 50.1 bits (118), Expect(4) = 3e-23
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Frame = +1
Query: 598 CGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAYHS-------- 753
C +ASG FK E +YHS K+ LAV IKKF+ +L HFLI D + + S
Sbjct: 572 CRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 631
Query: 754 ----------STTVSQYSFEVHHI 795
+S YSF+V HI
Sbjct: 632 DSKLGRNIRWQAWLSHYSFDVEHI 655
Score = 30.4 bits (67), Expect(4) = 3e-23
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 KMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQ-TLSARKRILQTDATDKY*GATL 568
K+ P WT+ T + K L+ P L L K I++TDA+D Y G L
Sbjct: 503 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGML 557
Score = 30.0 bits (66), Expect(4) = 3e-23
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 2 YKWRVMPFDLKTAQSLFQK 58
Y+W V+PF LK A S+FQ+
Sbjct: 363 YEWNVVPFGLKQAPSIFQR 381
>gb|AGT42112.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 66.6 bits (161), Expect(4) = 3e-23
Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 111 DILLVSTTYPEHLQLLSNVIK---EYGIMVSQRKMVLAQQSVSLLGMEFVQGHYKPGTYI 281
DIL+ S +HL ++ +++ ++GI++S++K L ++ ++ LG+E +G +KP +I
Sbjct: 400 DILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHI 459
Query: 282 AEELLKFPEENLTVKQVQRFLGIVNYL*EFIPAQLKTFMPL 404
E + KFP+ KQ+QRFLGI+ Y ++IP + PL
Sbjct: 460 LEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPL 500
Score = 50.1 bits (118), Expect(4) = 3e-23
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Frame = +1
Query: 598 CGFASG*FKDLEIHYHSTFKKILAVKYAIKKFNYHLIGHHFLIECDMSAYHS-------- 753
C +ASG FK E +YHS K+ LAV IKKF+ +L HFLI D + + S
Sbjct: 572 CRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKG 631
Query: 754 ----------STTVSQYSFEVHHI 795
+S YSF+V HI
Sbjct: 632 DSKLGRNIRWQAWLSHYSFDVEHI 655
Score = 30.4 bits (67), Expect(4) = 3e-23
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 KMLSKDPPPWTQAQTQAILT*KSRLRNIPNLQ-TLSARKRILQTDATDKY*GATL 568
K+ P WT+ T + K L+ P L L K I++TDA+D Y G L
Sbjct: 503 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGML 557
Score = 30.0 bits (66), Expect(4) = 3e-23
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 2 YKWRVMPFDLKTAQSLFQK 58
Y+W V+PF LK A S+FQ+
Sbjct: 363 YEWNVVPFGLKQAPSIFQR 381