BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00007998
         (1209 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, ch...   354   5e-95
ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protei...   346   1e-92
ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253...   345   3e-92
pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regul...   342   2e-91
gb|EOY02045.1| SsDNA-binding transcriptional regulator isoform 1...   338   3e-90
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm...   334   4e-89
ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding prote...   330   7e-88
ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Caps...   329   1e-87
gb|EMJ23674.1| hypothetical protein PRUPE_ppa009776mg [Prunus pe...   328   3e-87
ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Ar...   328   3e-87
ref|XP_006291681.1| hypothetical protein CARUB_v10017841mg [Caps...   327   5e-87
gb|ADL36850.1| WHY domain class transcription factor [Malus dome...   327   5e-87
gb|ESW25829.1| hypothetical protein PHAVU_003G068800g [Phaseolus...   326   1e-86
ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyra...   326   1e-86
ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding prote...   325   2e-86
ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citr...   325   2e-86
ref|NP_178377.2| single-stranded DNA-binding protein WHY3 [Arabi...   325   2e-86
gb|ESW25830.1| hypothetical protein PHAVU_003G068800g [Phaseolus...   325   3e-86
ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Popu...   323   9e-86
ref|NP_172893.1| single-stranded DNA-binding protein WHY1 [Arabi...   323   1e-85

>ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, chloroplastic [Solanum
           tuberosum] gi|75174555|sp|Q9LL85.1|WHY1_SOLTU RecName:
           Full=Single-stranded DNA-binding protein WHY1,
           chloroplastic; AltName: Full=DNA-binding protein p24;
           AltName: Full=PR-10a binding factor 2; Short=PBF-2;
           AltName: Full=Protein WHIRLY 1; Short=StWhy1; Flags:
           Precursor gi|9651810|gb|AAF91282.1|AF233342_1
           DNA-binding protein p24 [Solanum tuberosum]
          Length = 274

 Score =  354 bits (908), Expect = 5e-95
 Identities = 183/282 (64%), Positives = 208/282 (73%), Gaps = 5/282 (1%)
 Frame = +3

Query: 102 MLNLSLASSSMG--RLTIQNPNKQDLHQFHFQL---FPTFLFDTTNXXXXXXXXXXXXXX 266
           M N SL+ S      L +QNP K     F   +   F     +TT               
Sbjct: 1   MSNFSLSPSPTSGFSLNLQNPTKTSYLSFSSSINTIFAPLSSNTTKSFSGLTHKAALPRN 60

Query: 267 XXXXCRHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPP 446
               CRHSDYFE        +  P        QG S P+VFVGYSIYKGKAALTVEPR P
Sbjct: 61  LSLTCRHSDYFEPQQQQQQQQQQP--------QGASTPKVFVGYSIYKGKAALTVEPRSP 112

Query: 447 EFTPLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEF 626
           EF+PLDSGAFKLS+EG V+LQFAPAAGVRQYDWSRKQVFSLSVTE+G++ISLG KDSCEF
Sbjct: 113 EFSPLDSGAFKLSREGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEF 172

Query: 627 FHDPFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNS 806
           FHDP KG+SDEGRVRKVLK+EPLPDGSGHFFNLSVQNKL+NLDENIYIPVTKAEFAVL S
Sbjct: 173 FHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVS 232

Query: 807 AFNYVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           AFN+V+PYLLGW+T  +S KPED++R+N+ANPRSGA+LEW+R
Sbjct: 233 AFNFVMPYLLGWHTAVNSFKPEDASRSNNANPRSGAELEWNR 274


>ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protein WHY1,
           chloroplastic-like [Solanum lycopersicum]
          Length = 268

 Score =  346 bits (887), Expect = 1e-92
 Identities = 168/218 (77%), Positives = 187/218 (85%)
 Frame = +3

Query: 279 CRHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTP 458
           CRHSDYFE                    QG S P+VFVGYSIYKGKAALTVEPR PEF+P
Sbjct: 63  CRHSDYFEP------------QQQQQQLQGASTPKVFVGYSIYKGKAALTVEPRSPEFSP 110

Query: 459 LDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDP 638
           LDSGAFKLSKEG V+LQFAPAAGVRQYDWSRKQVFSLSVTE+G++ISLG KDSCEFFHDP
Sbjct: 111 LDSGAFKLSKEGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDP 170

Query: 639 FKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 818
            KG+SDEGRVRKVLK+EPLPDGSGHFFNLSVQNKL+NLDENIYIPVTKAEFAVL SAFN+
Sbjct: 171 NKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNF 230

Query: 819 VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           V+PYLLGW+T  +S KPED++R+N+ NPRSGA+LEW+R
Sbjct: 231 VMPYLLGWHTAVNSFKPEDASRSNNTNPRSGAELEWNR 268


>ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253653 [Vitis vinifera]
           gi|296086421|emb|CBI32010.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  345 bits (884), Expect = 3e-92
 Identities = 181/277 (65%), Positives = 209/277 (75%)
 Frame = +3

Query: 102 MLNLSLASSSMGRLTIQNPNKQDLHQFHFQLFPTFLFDTTNXXXXXXXXXXXXXXXXXXC 281
           M +L L SSS    TIQNP     H        + L  T+                   C
Sbjct: 1   MHHLHLLSSSF---TIQNPRLCPNHSLSSLHSSSPLSFTSRTPLLLSTTRHFRKKRSLQC 57

Query: 282 RHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 461
           R SDYF+        R  PNDSSF    G   PRVFVG+SIYKGKAALTVEP+ PEFTPL
Sbjct: 58  RQSDYFQQQNITR--RQPPNDSSFG---GALQPRVFVGHSIYKGKAALTVEPKAPEFTPL 112

Query: 462 DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 641
           DSGAFK+SKEGFVLLQFAPAAGVRQYDW RKQVFSLSVTE+G+LISLG ++SCEFFHDPF
Sbjct: 113 DSGAFKVSKEGFVLLQFAPAAGVRQYDWGRKQVFSLSVTEIGSLISLGARESCEFFHDPF 172

Query: 642 KGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYV 821
           KG+S+EG+VRKVLK+EPLPDGSGHFFNLSVQNKL+N+DENIYIPVT+AEFAVL SAFN++
Sbjct: 173 KGRSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNMDENIYIPVTRAEFAVLISAFNFI 232

Query: 822 LPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           +PYLLGW+ +A+SIKP+D++R N+ANPRSG D EWSR
Sbjct: 233 VPYLLGWHAYANSIKPDDTSRVNNANPRSG-DFEWSR 268


>pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regulator Pbf-2
           gi|157878743|pdb|1L3A|B Chain B, Structure Of The Plant
           Transcriptional Regulator Pbf-2 gi|157878744|pdb|1L3A|C
           Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 gi|157878745|pdb|1L3A|D Chain D,
           Structure Of The Plant Transcriptional Regulator Pbf-2
          Length = 227

 Score =  342 bits (876), Expect = 2e-91
 Identities = 167/216 (77%), Positives = 188/216 (87%)
 Frame = +3

Query: 282 RHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 461
           R SDYFE        +  P        QG S P+VFVGYSIYKGKAALTVEPR PEF+PL
Sbjct: 12  RGSDYFEPQQQQQQQQQQP--------QGASTPKVFVGYSIYKGKAALTVEPRSPEFSPL 63

Query: 462 DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 641
           DSGAFKLS+EG V+LQFAPAAGVRQYDWSRKQVFSLSVTE+G++ISLGTKDSCEFFHDP 
Sbjct: 64  DSGAFKLSREGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGTKDSCEFFHDPN 123

Query: 642 KGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYV 821
           KG+SDEGRVRKVLK+EPLPDGSGHFFNLSVQNKL+NLDENIYIPVTKAEFAVL SAFN+V
Sbjct: 124 KGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFV 183

Query: 822 LPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWS 929
           +PYLLGW+T  +S KPED++R+N+ANPRSGA+LEW+
Sbjct: 184 MPYLLGWHTAVNSFKPEDASRSNNANPRSGAELEWN 219


>gb|EOY02045.1| SsDNA-binding transcriptional regulator isoform 1 [Theobroma cacao]
          Length = 270

 Score =  338 bits (867), Expect = 3e-90
 Identities = 160/218 (73%), Positives = 188/218 (86%)
 Frame = +3

Query: 279 CRHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTP 458
           CR S+YF+        RFS + S+ S      PPR +VG+S+YKGKAALTVEPR PEF P
Sbjct: 58  CRQSEYFDQQQ-----RFSNSSSTASPPASGLPPRFYVGHSVYKGKAALTVEPRAPEFVP 112

Query: 459 LDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDP 638
           LDSGAFK+S+EGFVLLQFAPAAGVRQYDWSRKQVFSLSVTE+G LISLG ++SCEFFHDP
Sbjct: 113 LDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGALISLGARESCEFFHDP 172

Query: 639 FKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 818
           FKGKS+EG+VRKVLK+EPLPDGSGHFFNL VQN+L+NLDENIYIP+T+AEF VLNSAF++
Sbjct: 173 FKGKSEEGKVRKVLKVEPLPDGSGHFFNLGVQNRLLNLDENIYIPITRAEFTVLNSAFSF 232

Query: 819 VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           +LPYLLGW+ FA+SIKPE+++R N+ANPR G D EWSR
Sbjct: 233 ILPYLLGWHAFANSIKPEEASRVNNANPRYGGDYEWSR 270


>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
           gi|223540620|gb|EEF42183.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score =  334 bits (857), Expect = 4e-89
 Identities = 162/219 (73%), Positives = 188/219 (85%), Gaps = 1/219 (0%)
 Frame = +3

Query: 279 CRHSDYFEAXXXXXXX-RFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFT 455
           CR S++++         R S NDSSF+SQ   + PRV+VG+SIYKGKAALTVEPR PEF 
Sbjct: 53  CRQSEFYDQQQQKYNPSRPSSNDSSFASQSPAAVPRVYVGHSIYKGKAALTVEPRAPEFA 112

Query: 456 PLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHD 635
            LDSGAFK+++EGFVLLQFAPAAGVRQYDWSRKQVFSLSVTE+G +ISLG +DSCEFFHD
Sbjct: 113 ALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHD 172

Query: 636 PFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFN 815
           P KGKSDEG++RKVLK+EPLPDGSGHFFNLSVQNK +N+DE+IYIPVTKAEFAVL SAFN
Sbjct: 173 PNKGKSDEGKIRKVLKVEPLPDGSGHFFNLSVQNKPMNMDESIYIPVTKAEFAVLISAFN 232

Query: 816 YVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           Y+LPYLLGW+TFA+SIKP+ +   N+ANPR G D EWSR
Sbjct: 233 YILPYLLGWHTFANSIKPDLNGHMNNANPRFGGDYEWSR 271


>ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 270

 Score =  330 bits (846), Expect = 7e-88
 Identities = 168/276 (60%), Positives = 198/276 (71%), Gaps = 2/276 (0%)
 Frame = +3

Query: 111 LSLASSSMGRLTIQNPNKQDLHQFHFQLFPTFLFDTTNXXXXXXXXXXXXXXXXXXCRHS 290
           L L  S    + +QNPN       H       +F T +                  CR S
Sbjct: 2   LKLECSLSSPVAVQNPN-------HSVSSKARVFSTNSFGFAPNSTSFRKRRLALKCRQS 54

Query: 291 DYFEAXXXXXXXRFSPNDSSFSSQQGTS--PPRVFVGYSIYKGKAALTVEPRPPEFTPLD 464
           +YF+          S   S+  S  G S  P R +VG+SIYKGKAALTVEP+ PEFT LD
Sbjct: 55  EYFDQQRLTAPNPPSTAASAPQSPAGASAGPARFYVGHSIYKGKAALTVEPKAPEFTALD 114

Query: 465 SGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPFK 644
           SGAFK+S+EGFVLLQFAPAAGVR YDWSRKQVFSLSVTE+G+++SLG K+SCEFFHDPFK
Sbjct: 115 SGAFKMSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSIVSLGAKESCEFFHDPFK 174

Query: 645 GKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYVL 824
           GKS+EG+VRKVLK+EPLPDGSG FFNLSVQNKL+NLDENIYIPVT+AEFAVLNSAFNY+L
Sbjct: 175 GKSEEGKVRKVLKVEPLPDGSGRFFNLSVQNKLINLDENIYIPVTRAEFAVLNSAFNYLL 234

Query: 825 PYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           PYL+GW+ + +S+KPED +R N+A PR G D EWSR
Sbjct: 235 PYLIGWHAYVNSVKPEDMSRVNNATPRYGGDFEWSR 270


>ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Capsella rubella]
           gi|482571985|gb|EOA36172.1| hypothetical protein
           CARUB_v10010024mg [Capsella rubella]
          Length = 266

 Score =  329 bits (844), Expect = 1e-87
 Identities = 162/220 (73%), Positives = 188/220 (85%), Gaps = 3/220 (1%)
 Frame = +3

Query: 282 RHSDYFEAXXXXXXXRFSPNDSS--FSSQQGT-SPPRVFVGYSIYKGKAALTVEPRPPEF 452
           R +DYFE        RF  + SS  +SSQ    SP R +VG+SIYKGKAALTVEPR PEF
Sbjct: 53  RQTDYFEKQ------RFGDSSSSPSYSSQNAEGSPARFYVGHSIYKGKAALTVEPRAPEF 106

Query: 453 TPLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFH 632
             LDSGAFKLSK+GF+LLQFAP+AGVRQYDWS+KQVFSLSVTE+G L+SLG K+SCEFFH
Sbjct: 107 VALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPKESCEFFH 166

Query: 633 DPFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAF 812
           DPFKGKSDEG+VRKVLK+EPLPDGSGHFFNLSVQNKL+N+D+NIYIP+T+AEFAVL SAF
Sbjct: 167 DPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNVDDNIYIPITRAEFAVLISAF 226

Query: 813 NYVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           N+VLPYL+GW+ FA+SIKPEDSNR N+A+P  G D EW+R
Sbjct: 227 NFVLPYLIGWHAFANSIKPEDSNRMNNASPNYGGDYEWNR 266


>gb|EMJ23674.1| hypothetical protein PRUPE_ppa009776mg [Prunus persica]
          Length = 278

 Score =  328 bits (841), Expect = 3e-87
 Identities = 170/279 (60%), Positives = 203/279 (72%), Gaps = 5/279 (1%)
 Frame = +3

Query: 111 LSLASSSMGRLTIQNPNKQDLHQFHFQLFPTFLFDTTNXXXXXXXXXXXXXXXXXXCRHS 290
           L L S S   +  QNPN+        +L       +TN                  CR S
Sbjct: 2   LRLHSLSSPAVAAQNPNQNPKQCLASELSSRARVFSTNSFGFAPSLSSSRKRLSLKCRQS 61

Query: 291 DYFEAXXXXXXXRFSPNDSSFSSQQ----GTS-PPRVFVGYSIYKGKAALTVEPRPPEFT 455
           +YF+          +PN  S  + Q    GT  PPR FVG+SIYKGKAALTVEP+ PEFT
Sbjct: 62  EYFDQQRASTAS--APNKPSPPAPQTPAGGTGLPPRFFVGHSIYKGKAALTVEPKAPEFT 119

Query: 456 PLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHD 635
            LDSGAFKLS+EGFVLLQFAPAAGVR YDWSRKQVFSLSVTE+G+L+ LG+K+S EFFHD
Sbjct: 120 ALDSGAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSLVCLGSKESIEFFHD 179

Query: 636 PFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFN 815
           PFKGKSDEG+VRKVLK+EPLPDGSGHFFNLSVQNKL+NLDE++YIP+T+AEFAVL SAFN
Sbjct: 180 PFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESVYIPITRAEFAVLKSAFN 239

Query: 816 YVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           ++LPY+LGW+ +A+SIKPEDS+R N+++ R G D EWSR
Sbjct: 240 FILPYILGWHAYANSIKPEDSSRMNNSSSRYGGDFEWSR 278


>ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Arabidopsis thaliana]
           gi|330250525|gb|AEC05619.1| single-stranded DNA-binding
           protein WHY3 [Arabidopsis thaliana]
          Length = 267

 Score =  328 bits (841), Expect = 3e-87
 Identities = 160/217 (73%), Positives = 185/217 (85%)
 Frame = +3

Query: 282 RHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 461
           R SDYFE        RF   DSS S     S PR +VG+SIYKGKAALT+EPR PEF  L
Sbjct: 59  RQSDYFEKQ------RFG--DSSSSQNAEVSSPRFYVGHSIYKGKAALTIEPRAPEFVAL 110

Query: 462 DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 641
           +SGAFKL+KEGF+LLQFAPAAGVRQYDWSRKQVFSLSVTE+GNL+SLG ++SCEFFHDPF
Sbjct: 111 ESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPF 170

Query: 642 KGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYV 821
           KGK DEG+VRKVLK+EPLPDGSG FFNLSVQNKL+N+DE++YIP+TKAEFAVL SAFN+V
Sbjct: 171 KGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFV 230

Query: 822 LPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           LP+L+GW+ FA+SIKPEDSNR N+A+P+ G D EWSR
Sbjct: 231 LPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 267


>ref|XP_006291681.1| hypothetical protein CARUB_v10017841mg [Capsella rubella]
           gi|482560388|gb|EOA24579.1| hypothetical protein
           CARUB_v10017841mg [Capsella rubella]
          Length = 269

 Score =  327 bits (839), Expect = 5e-87
 Identities = 161/218 (73%), Positives = 188/218 (86%), Gaps = 1/218 (0%)
 Frame = +3

Query: 282 RHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 461
           R  DYFE        RF  + S   + +G+SP R +VG+SIYKGKAALTVEPR PEF  L
Sbjct: 59  RQGDYFEKQ------RFGDSSSPPQNTEGSSP-RFYVGHSIYKGKAALTVEPRAPEFVAL 111

Query: 462 DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 641
           +SGAFKL+KEGF+LLQFAPAAGVRQYDWSRKQVFSLSVTE+GNLISLG ++SCEFFHDPF
Sbjct: 112 ESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLISLGPRESCEFFHDPF 171

Query: 642 KGK-SDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 818
           KGK SDEG+VRKVLK+EPLPDGSG FFNLSVQN+L+N+DEN+YIP+TKAEFAVL SAFN+
Sbjct: 172 KGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNRLLNVDENVYIPITKAEFAVLISAFNF 231

Query: 819 VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           +LP+L+GWNTFA+SIKPEDSNR N+A+P+ G D EWSR
Sbjct: 232 ILPHLIGWNTFATSIKPEDSNRLNNASPKYGGDYEWSR 269


>gb|ADL36850.1| WHY domain class transcription factor [Malus domestica]
          Length = 276

 Score =  327 bits (839), Expect = 5e-87
 Identities = 171/281 (60%), Positives = 201/281 (71%), Gaps = 4/281 (1%)
 Frame = +3

Query: 102 MLNLSLASSSMGRLTIQNPNKQDLHQFHFQLFPTFLFDTTNXXXXXXXXXXXXXXXXXXC 281
           ML L L SS     T Q PN+        QL       +TN                  C
Sbjct: 1   MLRLHLLSSPA---TAQKPNQNPSQFLSSQLLSRARVFSTNTFGFAPSPILSRKRLSLKC 57

Query: 282 RHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSP----PRVFVGYSIYKGKAALTVEPRPPE 449
           R S+YF+          SPN  S +           PR +VG+SIYKGKAALTVEP+ PE
Sbjct: 58  RQSEYFDQQRTSTAA--SPNKPSPAPPTPAGATGMAPRFYVGHSIYKGKAALTVEPKAPE 115

Query: 450 FTPLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFF 629
           FTPLDSGAFKLS+EGFVLLQFAPAAGVR YDWSRKQVFSLSVTE+G+L+SLG+K+S EFF
Sbjct: 116 FTPLDSGAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSLVSLGSKESLEFF 175

Query: 630 HDPFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSA 809
           HDPFKGKSDEG+VRKVLK+EPLPDGSGHFFNLSVQNKL+NLDE+IYIP+T+AEFAVL SA
Sbjct: 176 HDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPITRAEFAVLKSA 235

Query: 810 FNYVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           FN++LPY+LGW+ +A+SIKPEDS+R N++  + G D EWSR
Sbjct: 236 FNFILPYILGWHAYANSIKPEDSSRANNSGLKYGGDFEWSR 276


>gb|ESW25829.1| hypothetical protein PHAVU_003G068800g [Phaseolus vulgaris]
          Length = 264

 Score =  326 bits (835), Expect = 1e-86
 Identities = 155/218 (71%), Positives = 184/218 (84%)
 Frame = +3

Query: 279 CRHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTP 458
           CRHSD F+        R +   +S ++     PPRV+VGYSIYKGKAALT+ PRPPEF P
Sbjct: 51  CRHSDLFDQNTLASSQRPTRPTASVAAL----PPRVYVGYSIYKGKAALTLTPRPPEFVP 106

Query: 459 LDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDP 638
           LDSGA+K+SKEG+VLLQFAPA G RQYDW+RKQVFSLSV EMG++ISLGT++S EFFHDP
Sbjct: 107 LDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSVISLGTRESFEFFHDP 166

Query: 639 FKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 818
           FKGKSDEG+VRK+LK+EPLPDGSGH FNLSVQNKLVN+DENIYIP+TKAE AVL S FN+
Sbjct: 167 FKGKSDEGKVRKILKLEPLPDGSGHLFNLSVQNKLVNVDENIYIPITKAELAVLTSTFNF 226

Query: 819 VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           ++PYLLGW+TFA+SIKPED++  N+ANPR G D EW+R
Sbjct: 227 IMPYLLGWHTFANSIKPEDTSGGNNANPRYGGDYEWNR 264


>ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338646|gb|EFH69063.1| ATWHY1/PTAC1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 264

 Score =  326 bits (835), Expect = 1e-86
 Identities = 157/217 (72%), Positives = 183/217 (84%)
 Frame = +3

Query: 282 RHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 461
           R +DYFE        RF  + SS S      P R +VG+SIYKGKAALT+EPR PEF  L
Sbjct: 54  RQTDYFEKQ------RFGDSSSSSSQNAEGLPARFYVGHSIYKGKAALTMEPRAPEFVAL 107

Query: 462 DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 641
           DSGAFKLSK+GF+LLQFAP+AGVRQYDWS+KQVFSLSVTE+G L+SLG ++SCEFFHDPF
Sbjct: 108 DSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPF 167

Query: 642 KGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYV 821
           KGKSDEG+VRKVLK+EPLPDGSGHFFNLSVQNKLVN+DE+IYIP+T+AEFAVL SAFN+V
Sbjct: 168 KGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFV 227

Query: 822 LPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           LPYL+GW+ FA+SIKPED+NR N+A P  G D EW+R
Sbjct: 228 LPYLIGWHAFANSIKPEDTNRANNAPPNYGGDYEWNR 264


>ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like [Citrus sinensis]
          Length = 267

 Score =  325 bits (834), Expect = 2e-86
 Identities = 156/221 (70%), Positives = 189/221 (85%), Gaps = 3/221 (1%)
 Frame = +3

Query: 279 CRHSDYFEAXXXXXXXRFSPNDSSFSSQQ---GTSPPRVFVGYSIYKGKAALTVEPRPPE 449
           CR S+Y+E          SP++SS++      GT P RV+VG+SIYKGKAALTVEPR PE
Sbjct: 51  CRQSEYYEQKSFSA----SPSNSSYAPTDVAVGTLPTRVYVGHSIYKGKAALTVEPRGPE 106

Query: 450 FTPLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFF 629
           F  LDSGA KLS+EGFV+LQFAPAAGVRQYDWSRKQVFSLSVTE+G+L++LG ++SCEFF
Sbjct: 107 FVSLDSGAVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFF 166

Query: 630 HDPFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSA 809
           HDPFKGKS+EG+VRKVLK+EPLPDGSGHFFNLSVQNKL+NLDE+IYIPVT+AE+ VL SA
Sbjct: 167 HDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTRAEYTVLVSA 226

Query: 810 FNYVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           FN++LPYLLGW+ +AS+I+ +D+ RTN+ANPR G D EW+R
Sbjct: 227 FNFILPYLLGWHAYASTIRADDTARTNNANPRYGGDYEWNR 267


>ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citrus clementina]
           gi|557540823|gb|ESR51867.1| hypothetical protein
           CICLE_v10032427mg [Citrus clementina]
          Length = 267

 Score =  325 bits (834), Expect = 2e-86
 Identities = 156/221 (70%), Positives = 189/221 (85%), Gaps = 3/221 (1%)
 Frame = +3

Query: 279 CRHSDYFEAXXXXXXXRFSPNDSSFSSQQ---GTSPPRVFVGYSIYKGKAALTVEPRPPE 449
           CR S+Y+E          SP++SS++      GT P RV+VG+SIYKGKAALTVEPR PE
Sbjct: 51  CRQSEYYEQKSFSA----SPSNSSYAPTDVAVGTLPTRVYVGHSIYKGKAALTVEPRGPE 106

Query: 450 FTPLDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFF 629
           F  LDSGA KLS+EGFV+LQFAPAAGVRQYDWSRKQVFSLSVTE+G+L++LG ++SCEFF
Sbjct: 107 FVSLDSGAVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFF 166

Query: 630 HDPFKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSA 809
           HDPFKGKS+EG+VRKVLK+EPLPDGSGHFFNLSVQNKL+NLDE+IYIPVT+AE+ VL SA
Sbjct: 167 HDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTRAEYTVLVSA 226

Query: 810 FNYVLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           FN++LPYLLGW+ +AS+I+ +D+ RTN+ANPR G D EW+R
Sbjct: 227 FNFILPYLLGWHAYASTIRADDTARTNNANPRYGGDYEWNR 267


>ref|NP_178377.2| single-stranded DNA-binding protein WHY3 [Arabidopsis thaliana]
           gi|75115367|sp|Q66GR6.1|WHY3_ARATH RecName:
           Full=Single-stranded DNA-binding protein WHY3,
           chloroplastic; AltName: Full=Protein PLASTID
           TRANSCRIPTIONALLY ACTIVE 11; AltName: Full=Protein
           WHIRLY 3; Short=AtWHY3; Flags: Precursor
           gi|51536442|gb|AAU05459.1| At2g02740 [Arabidopsis
           thaliana] gi|51972072|gb|AAU15140.1| At2g02740
           [Arabidopsis thaliana] gi|330250524|gb|AEC05618.1|
           single-stranded DNA-binding protein WHY3 [Arabidopsis
           thaliana]
          Length = 268

 Score =  325 bits (833), Expect = 2e-86
 Identities = 161/218 (73%), Positives = 186/218 (85%), Gaps = 1/218 (0%)
 Frame = +3

Query: 282 RHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 461
           R SDYFE        RF   DSS S     S PR +VG+SIYKGKAALT+EPR PEF  L
Sbjct: 59  RQSDYFEKQ------RFG--DSSSSQNAEVSSPRFYVGHSIYKGKAALTIEPRAPEFVAL 110

Query: 462 DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 641
           +SGAFKL+KEGF+LLQFAPAAGVRQYDWSRKQVFSLSVTE+GNL+SLG ++SCEFFHDPF
Sbjct: 111 ESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPF 170

Query: 642 KGK-SDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 818
           KGK SDEG+VRKVLK+EPLPDGSG FFNLSVQNKL+N+DE++YIP+TKAEFAVL SAFN+
Sbjct: 171 KGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNF 230

Query: 819 VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           VLP+L+GW+ FA+SIKPEDSNR N+A+P+ G D EWSR
Sbjct: 231 VLPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 268


>gb|ESW25830.1| hypothetical protein PHAVU_003G068800g [Phaseolus vulgaris]
          Length = 262

 Score =  325 bits (832), Expect = 3e-86
 Identities = 155/218 (71%), Positives = 182/218 (83%)
 Frame = +3

Query: 279 CRHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTP 458
           CRHSD F+        R +   +S        PPRV+VGYSIYKGKAALT+ PRPPEF P
Sbjct: 51  CRHSDLFDQNTLASSQRPTRPTAS------ALPPRVYVGYSIYKGKAALTLTPRPPEFVP 104

Query: 459 LDSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDP 638
           LDSGA+K+SKEG+VLLQFAPA G RQYDW+RKQVFSLSV EMG++ISLGT++S EFFHDP
Sbjct: 105 LDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSVISLGTRESFEFFHDP 164

Query: 639 FKGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNY 818
           FKGKSDEG+VRK+LK+EPLPDGSGH FNLSVQNKLVN+DENIYIP+TKAE AVL S FN+
Sbjct: 165 FKGKSDEGKVRKILKLEPLPDGSGHLFNLSVQNKLVNVDENIYIPITKAELAVLTSTFNF 224

Query: 819 VLPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           ++PYLLGW+TFA+SIKPED++  N+ANPR G D EW+R
Sbjct: 225 IMPYLLGWHTFANSIKPEDTSGGNNANPRYGGDYEWNR 262


>ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Populus trichocarpa]
           gi|118485247|gb|ABK94483.1| unknown [Populus
           trichocarpa] gi|222851421|gb|EEE88968.1| hypothetical
           protein POPTR_0008s14840g [Populus trichocarpa]
          Length = 265

 Score =  323 bits (828), Expect = 9e-86
 Identities = 153/200 (76%), Positives = 178/200 (89%)
 Frame = +3

Query: 333 SPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPLDSGAFKLSKEGFVLLQF 512
           S +  S +   G SPP+VFVG+SIYKGKAALTVEPR PEF+PLDSGA+KL KEGFVLLQF
Sbjct: 66  SRSSPSSAPPVGESPPKVFVGHSIYKGKAALTVEPRSPEFSPLDSGAYKLVKEGFVLLQF 125

Query: 513 APAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPFKGKSDEGRVRKVLKIEP 692
           APAA VRQYDW+RKQVFSLSVTE+G+L+SL  K SCEFFHDP KGKSDEG+VRK+LK+EP
Sbjct: 126 APAASVRQYDWTRKQVFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRKLLKVEP 185

Query: 693 LPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYVLPYLLGWNTFASSIKPE 872
           LPDGSGHFFNLSVQNK++N+DENIYIPVTKAE+ VL SAFNY+LPYLLGW+ +A+SIKP+
Sbjct: 186 LPDGSGHFFNLSVQNKVLNIDENIYIPVTKAEYTVLTSAFNYILPYLLGWHAYANSIKPD 245

Query: 873 DSNRTNSANPRSGADLEWSR 932
           DS+R N+A+PR G D EWSR
Sbjct: 246 DSSRGNNASPRYGGDYEWSR 265


>ref|NP_172893.1| single-stranded DNA-binding protein WHY1 [Arabidopsis thaliana]
           gi|75191428|sp|Q9M9S3.1|WHY1_ARATH RecName:
           Full=Single-stranded DNA-binding protein WHY1,
           chloroplastic; AltName: Full=Protein PLASTID
           TRANSCRIPTIONALLY ACTIVE 1; AltName: Full=Protein WHIRLY
           1; Short=AtWHY1; Flags: Precursor
           gi|7262683|gb|AAF43941.1|AC012188_18 Contains similarity
           to a hypothetical protein from Arabidopsis thaliana
           gb|AC002521.2. EST gb|AI995686 comes from this gene
           [Arabidopsis thaliana]
           gi|12083312|gb|AAG48815.1|AF332452_1 putative
           DNA-binding protein p24 [Arabidopsis thaliana]
           gi|13877787|gb|AAK43971.1|AF370156_1 putative
           DNA-binding protein p24 [Arabidopsis thaliana]
           gi|16323418|gb|AAL15203.1| putative DNA-binding protein
           p24 [Arabidopsis thaliana] gi|332191039|gb|AEE29160.1|
           ssDNA-binding transcriptional regulator [Arabidopsis
           thaliana]
          Length = 263

 Score =  323 bits (827), Expect = 1e-85
 Identities = 156/217 (71%), Positives = 186/217 (85%)
 Frame = +3

Query: 282 RHSDYFEAXXXXXXXRFSPNDSSFSSQQGTSPPRVFVGYSIYKGKAALTVEPRPPEFTPL 461
           R +DYFE        RF  + SS S  +G  P R +VG+SIYKGKAALTV+PR PEF  L
Sbjct: 54  RQTDYFEKQ------RFGDSSSSPSPAEGL-PARFYVGHSIYKGKAALTVDPRAPEFVAL 106

Query: 462 DSGAFKLSKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEMGNLISLGTKDSCEFFHDPF 641
           DSGAFKLSK+GF+LLQFAP+AGVRQYDWS+KQVFSLSVTE+G L+SLG ++SCEFFHDPF
Sbjct: 107 DSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPF 166

Query: 642 KGKSDEGRVRKVLKIEPLPDGSGHFFNLSVQNKLVNLDENIYIPVTKAEFAVLNSAFNYV 821
           KGKSDEG+VRKVLK+EPLPDGSGHFFNLSVQNKLVN+DE+IYIP+T+AEFAVL SAFN+V
Sbjct: 167 KGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFV 226

Query: 822 LPYLLGWNTFASSIKPEDSNRTNSANPRSGADLEWSR 932
           LPYL+GW+ FA+SIKPE+++R N+A+P  G D EW+R
Sbjct: 227 LPYLIGWHAFANSIKPEETSRVNNASPNYGGDYEWNR 263