BLASTX nr result

ID: Catharanthus23_contig00007873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00007873
         (369 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK30294.1|AF353207_1 beta-amylase [Castanea crenata]               59   5e-07
gb|EXC23157.1| hypothetical protein L484_018288 [Morus notabilis]      56   4e-06
emb|CBI28977.3| unnamed protein product [Vitis vinifera]               56   6e-06
ref|XP_002281003.1| PREDICTED: beta-amylase [Vitis vinifera]           56   6e-06
emb|CAN70833.1| hypothetical protein VITISV_005286 [Vitis vinifera]    56   6e-06
ref|XP_004289151.1| PREDICTED: beta-amylase-like [Fragaria vesca...    55   7e-06
pdb|1UKO|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mu...    55   7e-06
gb|EOY10020.1| Beta-amylase 6 [Theobroma cacao]                        55   1e-05
pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mu...    55   1e-05

>gb|AAK30294.1|AF353207_1 beta-amylase [Castanea crenata]
          Length = 514

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
 Frame = +3

Query: 3   DFIPDYIK----LAPLEQSRPKIPIQELLEATKPIRPFPWDDDPDMRVG 137
           D+ PD  K    + PLE+S+PK+PI+ LLEAT+P+ PFPWD + DM VG
Sbjct: 451 DYCPDPEKYSHHIGPLERSKPKMPIEYLLEATEPMEPFPWDKETDMSVG 499


>gb|EXC23157.1| hypothetical protein L484_018288 [Morus notabilis]
          Length = 511

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
 Frame = +3

Query: 3   DFIPDYIK----LAPLEQSRPKIPIQELLEATKPIRPFPWDDDPDMRV 134
           DF PD  K    + PLE S+P+IP +E+LEATKP +PFPWD   DM V
Sbjct: 447 DFCPDPEKYGHHIVPLEPSKPEIPTEEILEATKPEKPFPWDKATDMSV 494


>emb|CBI28977.3| unnamed protein product [Vitis vinifera]
          Length = 508

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
 Frame = +3

Query: 3   DFIPDYIK----LAPLEQSRPKIPIQELLEATKPIRPFPWDDDPDMRVG 137
           D+ PD  K    + PLE+S+PKIPI+++LEATKP+ PFP++ + DM VG
Sbjct: 440 DYCPDPNKYNSPIVPLEKSKPKIPIEDILEATKPMVPFPFNKETDMSVG 488


>ref|XP_002281003.1| PREDICTED: beta-amylase [Vitis vinifera]
          Length = 520

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
 Frame = +3

Query: 3   DFIPDYIK----LAPLEQSRPKIPIQELLEATKPIRPFPWDDDPDMRVG 137
           D+ PD  K    + PLE+S+PKIPI+++LEATKP+ PFP++ + DM VG
Sbjct: 452 DYCPDPNKYNSPIVPLEKSKPKIPIEDILEATKPMVPFPFNKETDMSVG 500


>emb|CAN70833.1| hypothetical protein VITISV_005286 [Vitis vinifera]
          Length = 520

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
 Frame = +3

Query: 3   DFIPDYIK----LAPLEQSRPKIPIQELLEATKPIRPFPWDDDPDMRVG 137
           D+ PD  K    + PLE+S+PKIPI+++LEATKP+ PFP++ + DM VG
Sbjct: 452 DYCPDPNKYNSPIVPLEKSKPKIPIEDILEATKPMVPFPFNKETDMSVG 500


>ref|XP_004289151.1| PREDICTED: beta-amylase-like [Fragaria vesca subsp. vesca]
          Length = 586

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 22/36 (61%), Positives = 29/36 (80%)
 Frame = +3

Query: 27  LAPLEQSRPKIPIQELLEATKPIRPFPWDDDPDMRV 134
           L PLE+S+PK   ++LLEATKP+ PFPWD++ DM V
Sbjct: 531 LGPLERSKPKFSTEDLLEATKPVEPFPWDEETDMSV 566


>pdb|1UKO|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant
           Substituted At Surface Region gi|46015826|pdb|1UKO|B
           Chain B, Crystal Structure Of Soybean Beta-Amylase
           Mutant Substituted At Surface Region
           gi|46015827|pdb|1UKO|C Chain C, Crystal Structure Of
           Soybean Beta-Amylase Mutant Substituted At Surface
           Region gi|46015828|pdb|1UKO|D Chain D, Crystal Structure
           Of Soybean Beta-Amylase Mutant Substituted At Surface
           Region
          Length = 495

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +3

Query: 27  LAPLEQSRPKIPIQELLEATKPIRPFPWDDDPDMRV 134
           + PL+ S PKIPI+ LLEATKP RPFPW D+ DM+V
Sbjct: 458 ITPLKPSAPKIPIEVLLEATKPTRPFPWLDETDMKV 493


>gb|EOY10020.1| Beta-amylase 6 [Theobroma cacao]
          Length = 500

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 21/37 (56%), Positives = 32/37 (86%)
 Frame = +3

Query: 24  KLAPLEQSRPKIPIQELLEATKPIRPFPWDDDPDMRV 134
           +L PL++S+PKIPI +LL+AT+ + PFPWD++ DM+V
Sbjct: 462 ELGPLQRSKPKIPIDDLLDATERLEPFPWDEETDMKV 498


>pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant
           Substituted At Surface Region gi|46015830|pdb|1UKP|B
           Chain B, Crystal Structure Of Soybean Beta-Amylase
           Mutant Substituted At Surface Region
           gi|46015831|pdb|1UKP|C Chain C, Crystal Structure Of
           Soybean Beta-Amylase Mutant Substituted At Surface
           Region gi|46015832|pdb|1UKP|D Chain D, Crystal Structure
           Of Soybean Beta-Amylase Mutant Substituted At Surface
           Region
          Length = 495

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +3

Query: 27  LAPLEQSRPKIPIQELLEATKPIRPFPWDDDPDMRV 134
           + PL  S PKIPI+ LLEATKP RPFPW D+ DM+V
Sbjct: 458 ITPLSPSAPKIPIEVLLEATKPTRPFPWLDETDMKV 493


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