BLASTX nr result
ID: Catharanthus23_contig00007810
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00007810
(4401 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 72 3e-09
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A... 71 4e-09
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 70 6e-09
ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302... 70 1e-08
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 68 3e-08
gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japo... 68 4e-08
gb|EMS65807.1| Endo-1,4-beta-xylanase Z [Triticum urartu] 67 5e-08
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 67 7e-08
gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indi... 67 9e-08
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 66 1e-07
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 66 2e-07
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo... 66 2e-07
gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japo... 66 2e-07
emb|CAE01608.2| OSJNBa0052O21.12 [Oryza sativa Japonica Group] 66 2e-07
ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein A... 65 4e-07
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 64 5e-07
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 64 8e-07
gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indi... 64 8e-07
gb|EEC67895.1| hypothetical protein OsI_35569 [Oryza sativa Indi... 64 8e-07
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe... 63 1e-06
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 71.6 bits (174), Expect = 3e-09
Identities = 40/94 (42%), Positives = 52/94 (55%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
EGLS LIRKA EQ+I G +S+LF+ADDSLL T D + +K+I YE
Sbjct: 937 EGLSALIRKAEREQQIHGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNIFSTYEA 996
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMP 19
AS Q IN KS+I F + + + +L MP
Sbjct: 997 ASGQKINKDKSAICFSPKSPAAIKEACSAILDMP 1030
>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 968
Score = 71.2 bits (173), Expect = 4e-09
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Frame = -1
Query: 345 PTSSVHRGQSMIPG*-----EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLC 181
PT + +G + P EGL+ L++KA E I G K V IS+L FADDSLL
Sbjct: 258 PTRGLRQGDPLSPYLFLMVSEGLTGLLQKADREGMIHGVKAAVDAPIISHLLFADDSLLF 317
Query: 180 KHGTTEDAIVMKSILQDYEEASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMP 19
+AI +K L YE A+ Q IN+QKS+I FG ++++ +I ++L +P
Sbjct: 318 GRAEIHEAIHVKQCLLLYESAAGQKINFQKSAIAFGPGLDDQTKLEITQMLGLP 371
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 70.5 bits (171), Expect = 6e-09
Identities = 37/100 (37%), Positives = 63/100 (63%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
EGLS LI+ ++ +++ G K G IS+L FA DSL+ T E+ + + ++L+ YE+
Sbjct: 104 EGLSALIQASIKAKQLHGFKASRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEK 163
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCTGEG 1
AS Q++N+QKS+ILFG ++ + + ++L + K G G
Sbjct: 164 ASGQAVNFQKSAILFGKGLDFRTSEQLSQLLGIYKTEGFG 203
>ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302635 [Fragaria vesca
subsp. vesca]
Length = 913
Score = 69.7 bits (169), Expect = 1e-08
Identities = 39/94 (41%), Positives = 57/94 (60%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
EGL+ L++KA E I G K V IS++ FADDSLL +AI +K L YE
Sbjct: 208 EGLTGLLQKADQEGMIHGVKAAVDAPIISHMLFADDSLLFGRAEIHEAIHVKQCLLLYES 267
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMP 19
A+ Q IN+QKS+I FG ++++ +I ++L +P
Sbjct: 268 AAGQKINFQKSAIAFGPGLDDQTKLEITQMLGVP 301
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 68.2 bits (165), Expect = 3e-08
Identities = 35/93 (37%), Positives = 55/93 (59%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
+ S ++++ V+ + I GAK G EIS+L FADDSLL T ++ + + IL YE
Sbjct: 656 DAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEA 715
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 22
AS Q INY+KS + F + E ++++ +L M
Sbjct: 716 ASGQKINYEKSEVSFSRGVSCEKKEELITLLHM 748
>gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japonica Group]
Length = 940
Score = 67.8 bits (164), Expect = 4e-08
Identities = 39/93 (41%), Positives = 51/93 (54%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
EGLS++++K IQG + G G IS+L FADDS+ +K LQ Y +
Sbjct: 279 EGLSSILQKKESMGVIQGIRNGHLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCK 338
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 22
AS Q IN QKSSI FG EE+ + E LQ+
Sbjct: 339 ASGQKINLQKSSIFFGQNCPEEIKNSVKETLQV 371
>gb|EMS65807.1| Endo-1,4-beta-xylanase Z [Triticum urartu]
Length = 679
Score = 67.4 bits (163), Expect = 5e-08
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
+G S L+R+A + +I+G G G +++L FADDS++ G+ + + +K IL+ YE
Sbjct: 572 KGFSALLRQAQEDNKIKGVHFGSTGPHVTHLLFADDSIVFLEGSQDSLLALKEILRKYEA 631
Query: 120 ASCQSINYQKSSILFG 73
AS Q +N QKSSI FG
Sbjct: 632 ASGQKVNLQKSSIFFG 647
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 67.0 bits (162), Expect = 7e-08
Identities = 33/93 (35%), Positives = 54/93 (58%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
+ S +I++ V ++++ GAK +G EIS+LFFADDSLL ++ ++ IL YE
Sbjct: 653 DAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYEL 712
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 22
AS Q INY+KS + + + ++ +L M
Sbjct: 713 ASGQKINYEKSEVSYSRGVSVSQKDELTNILNM 745
>gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group]
Length = 1860
Score = 66.6 bits (161), Expect = 9e-08
Identities = 38/93 (40%), Positives = 51/93 (54%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
EGLS++++K IQG + G G IS+L FADDS+ +K LQ Y +
Sbjct: 1423 EGLSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCK 1482
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 22
AS Q IN QKSSI FG E++ + E LQ+
Sbjct: 1483 ASGQKINLQKSSIFFGQNCPEDIKNSVKETLQV 1515
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 66.2 bits (160), Expect = 1e-07
Identities = 35/93 (37%), Positives = 55/93 (59%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
+ S +I+K V E+++ GAK +G IS+LFFAD SLL + ++ ++ IL YE+
Sbjct: 653 DAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECAIIVEILNLYEQ 712
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 22
AS Q INY KS + F + +++ +LQM
Sbjct: 713 ASGQKINYDKSEVSFSKGVSIAQKEELSNILQM 745
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 65.9 bits (159), Expect = 2e-07
Identities = 40/100 (40%), Positives = 57/100 (57%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
EGLS+LIR+A I GAK IS+L FADD L + A MK+IL+ YE
Sbjct: 1073 EGLSSLIRQAEGSGTISGAKICKNAPIISHLLFADDCFLFFKAKSGQAQGMKNILEMYES 1132
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCTGEG 1
+S QSIN+QKS + + +++ V I ++L + + G G
Sbjct: 1133 SSGQSINFQKSEVFYSRNVDDAVKASISQILGVQQVMGTG 1172
>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
Length = 662
Score = 65.9 bits (159), Expect = 2e-07
Identities = 38/97 (39%), Positives = 56/97 (57%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
EG S L+RK E R+QG K +S+L FADDSL+ DA +++IL YEE
Sbjct: 336 EGFSALLRKTEEEGRLQGIKVCHNATSVSHLLFADDSLIPCRANRGDAQNLQNILTLYEE 395
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCT 10
S Q +N +K +I+F + E +++M+ LQ+ K T
Sbjct: 396 FSGQMLNKEKFAIMFSSNTGSEKRREVMQTLQINKQT 432
>gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japonica Group]
Length = 490
Score = 65.9 bits (159), Expect = 2e-07
Identities = 38/93 (40%), Positives = 51/93 (54%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
EGLS++++K IQG + G G IS+L FADDS+ +K LQ Y +
Sbjct: 136 EGLSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCK 195
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 22
AS Q IN QKSSI FG E++ + E LQ+
Sbjct: 196 ASGQKINLQKSSIFFGQNCLEDIKNSVKETLQV 228
>emb|CAE01608.2| OSJNBa0052O21.12 [Oryza sativa Japonica Group]
Length = 427
Score = 65.9 bits (159), Expect = 2e-07
Identities = 38/93 (40%), Positives = 51/93 (54%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
EGLS++++K IQG + G G IS+L FADDS+ +K LQ Y +
Sbjct: 73 EGLSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCK 132
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQM 22
AS Q IN QKSSI FG E++ + E LQ+
Sbjct: 133 ASGQKINLQKSSIFFGQNCLEDIKNSVKETLQV 165
>ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 888
Score = 64.7 bits (156), Expect = 4e-07
Identities = 36/97 (37%), Positives = 54/97 (55%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
EGLS+LI K V + I+G K + +LFFADDS + ++ +++L YE
Sbjct: 217 EGLSSLISKVVADYTIKGLKLSPQAPILHHLFFADDSFIFGAAEADECQRFRTLLNMYES 276
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCT 10
AS Q INYQKSS++F + E ++ +LQ+ T
Sbjct: 277 ASGQKINYQKSSVVFRRNVSPENQSELAAILQVQLST 313
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 64.3 bits (155), Expect = 5e-07
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Frame = -1
Query: 351 FQPTSSVHRGQSMIPG*-----EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSL 187
F P+ + +G + P EGLSTL+R A ++ I G K G IS+LFFADDSL
Sbjct: 636 FFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSPISHLFFADDSL 695
Query: 186 LCKHGTTEDAIVMKSILQDYEEASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCTG 7
L T E+ + IL YE AS Q +N +KS + + +E + I + L G
Sbjct: 696 LFIRATEEEVENVMDILSTYEAASGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEG 755
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 63.5 bits (153), Expect = 8e-07
Identities = 32/75 (42%), Positives = 50/75 (66%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
EGLS +++KA + +I+G K ++++LFFADDSL+ DA+ ++ IL YE+
Sbjct: 230 EGLSAMLQKAEQKGKIEGIKICRGAPKVNHLFFADDSLILMRARASDALELRRILDVYEK 289
Query: 120 ASCQSINYQKSSILF 76
AS Q IN +KSS++F
Sbjct: 290 ASGQVINKEKSSMMF 304
>gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indica Group]
Length = 666
Score = 63.5 bits (153), Expect = 8e-07
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Frame = -1
Query: 351 FQPTSSVHRGQSMIPG*-----EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSL 187
F P+ + +G + P +GLS L+++AV I K +S+L FADD+L
Sbjct: 21 FAPSRGLRQGDPLSPFLFLFVADGLSALLKEAVQNGEITPVKVCRRAPGVSHLLFADDTL 80
Query: 186 LCKHGTTEDAIVMKSILQDYEEASCQSINYQKSSILFGAQMEEEVIKDIMEVLQ 25
L ++ A ++K++L+ Y ++ Q IN QK SILFG EE+ +++ VLQ
Sbjct: 81 LFFKANSDQANMVKNVLESYAASTGQLINPQKCSILFGHACPEELQEEVKNVLQ 134
>gb|EEC67895.1| hypothetical protein OsI_35569 [Oryza sativa Indica Group]
Length = 724
Score = 63.5 bits (153), Expect = 8e-07
Identities = 37/97 (38%), Positives = 56/97 (57%)
Frame = -1
Query: 300 EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLCKHGTTEDAIVMKSILQDYEE 121
+G S L+RK E R+QG K +S+L FADDSL+ DA +++IL YEE
Sbjct: 166 QGFSALLRKTEEEGRLQGIKVCHNATSVSHLLFADDSLIPCRANRGDAQNLQNILTLYEE 225
Query: 120 ASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPKCT 10
S Q I+ +K +I+F + E +++M+ LQ+ K T
Sbjct: 226 FSGQMIDKEKFAIMFSSNTGSEKRREVMQTLQINKQT 262
>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 63.2 bits (152), Expect = 1e-06
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Frame = -1
Query: 345 PTSSVHRGQSMIPG*-----EGLSTLIRKAVMEQRIQGAKKGVAGLEISYLFFADDSLLC 181
PT + +G + P EG +TL+ KA + ++QG +S+LFFADDS +
Sbjct: 1047 PTRGLRQGDPLSPYLFLLCAEGFTTLLSKAERQGQLQGIVICRGAPTVSHLFFADDSFVF 1106
Query: 180 KHGTTEDAIVMKSILQDYEEASCQSINYQKSSILFGAQMEEEVIKDIMEVLQMPK 16
T + V+K I + YE AS Q IN QKS + F A + + + VL +P+
Sbjct: 1107 AKATDNNCGVLKHIFEVYEHASGQQINCQKSCVAFSANIHMDTQSRLASVLGVPR 1161