BLASTX nr result

ID: Catharanthus23_contig00007096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00007096
         (434 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY29499.1| DEAD/DEAH box RNA helicase family protein isoform...   103   2e-20
gb|EOY29498.1| DEAD/DEAH box RNA helicase family protein isoform...   103   2e-20
gb|EOY29497.1| DEAD/DEAH box RNA helicase family protein isoform...   103   2e-20
ref|XP_002515525.1| dead box ATP-dependent RNA helicase, putativ...   103   2e-20
ref|XP_006353691.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   102   5e-20
ref|XP_004241774.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   102   5e-20
emb|CBI21031.3| unnamed protein product [Vitis vinifera]              101   1e-19
ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   101   1e-19
gb|EXB88204.1| DEAD-box ATP-dependent RNA helicase 56 [Morus not...   100   2e-19
ref|XP_006346265.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   100   2e-19
gb|AFV30230.1| ATP-dependent RNA helicase [Medicago sativa]           100   3e-19
gb|AFK41905.1| unknown [Medicago truncatula]                          100   3e-19
ref|XP_002337696.1| predicted protein [Populus trichocarpa]           100   3e-19
ref|XP_002324856.1| hypothetical protein POPTR_0018s01620g [Popu...   100   3e-19
ref|XP_002309623.1| hypothetical protein POPTR_0006s26940g [Popu...   100   3e-19
gb|ABK93079.1| unknown [Populus trichocarpa]                          100   3e-19
ref|XP_003588757.1| DEAD-box ATP-dependent RNA helicase [Medicag...   100   3e-19
gb|ESW09025.1| hypothetical protein PHAVU_009G093800g [Phaseolus...    99   8e-19
gb|AGV54745.1| DEAD-box ATP-dependent RNA helicase 56-like prote...    99   8e-19
gb|AGV54235.1| DEAD-box ATP-dependent RNA helicase 56 [Phaseolus...    99   8e-19

>gb|EOY29499.1| DEAD/DEAH box RNA helicase family protein isoform 3 [Theobroma
           cacao]
          Length = 429

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/72 (73%), Positives = 55/72 (76%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MGET+                 KAPDSV+AKVNGESAKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           AIVDSGFEHPSE
Sbjct: 61  AIVDSGFEHPSE 72


>gb|EOY29498.1| DEAD/DEAH box RNA helicase family protein isoform 2 [Theobroma
           cacao]
          Length = 428

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/72 (73%), Positives = 55/72 (76%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MGET+                 KAPDSV+AKVNGESAKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           AIVDSGFEHPSE
Sbjct: 61  AIVDSGFEHPSE 72


>gb|EOY29497.1| DEAD/DEAH box RNA helicase family protein isoform 1 [Theobroma
           cacao]
          Length = 485

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/72 (73%), Positives = 55/72 (76%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MGET+                 KAPDSV+AKVNGESAKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           AIVDSGFEHPSE
Sbjct: 61  AIVDSGFEHPSE 72


>ref|XP_002515525.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223545469|gb|EEF46974.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 275

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/72 (73%), Positives = 55/72 (76%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MGET+                 KAPDSV+AKVNGESAKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVAAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           AIVDSGFEHPSE
Sbjct: 61  AIVDSGFEHPSE 72


>ref|XP_006353691.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like [Solanum
           tuberosum]
          Length = 428

 Score =  102 bits (254), Expect = 5e-20
 Identities = 52/72 (72%), Positives = 54/72 (75%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MG+TK                 KAPDSV+ KVNGESAKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDTKENEAYEEELLDYEEDDEKAPDSVNGKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           AIVDSGFEHPSE
Sbjct: 61  AIVDSGFEHPSE 72


>ref|XP_004241774.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Solanum
           lycopersicum]
          Length = 428

 Score =  102 bits (254), Expect = 5e-20
 Identities = 52/72 (72%), Positives = 54/72 (75%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MG+TK                 KAPDSV+ KVNGESAKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDTKENEAYEEELLDYEEDDEKAPDSVNGKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           AIVDSGFEHPSE
Sbjct: 61  AIVDSGFEHPSE 72


>emb|CBI21031.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  101 bits (251), Expect = 1e-19
 Identities = 51/72 (70%), Positives = 54/72 (75%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MGET+                 KAPDSV+ KVNGE+AKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEDKAPDSVTGKVNGEAAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           AIVDSGFEHPSE
Sbjct: 61  AIVDSGFEHPSE 72


>ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
           vinifera]
          Length = 428

 Score =  101 bits (251), Expect = 1e-19
 Identities = 51/72 (70%), Positives = 54/72 (75%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MGET+                 KAPDSV+ KVNGE+AKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEDKAPDSVTGKVNGEAAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           AIVDSGFEHPSE
Sbjct: 61  AIVDSGFEHPSE 72


>gb|EXB88204.1| DEAD-box ATP-dependent RNA helicase 56 [Morus notabilis]
          Length = 518

 Score =  100 bits (249), Expect = 2e-19
 Identities = 51/72 (70%), Positives = 53/72 (73%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MGET+                 KAPDSV AKVNGE+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDVYDEELVDYEEEDEKAPDSVGAKVNGEAPKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           AIVDSGFEHPSE
Sbjct: 61  AIVDSGFEHPSE 72


>ref|XP_006346265.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like isoform X1
           [Solanum tuberosum] gi|565358907|ref|XP_006346266.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like
           isoform X2 [Solanum tuberosum]
          Length = 428

 Score =  100 bits (249), Expect = 2e-19
 Identities = 47/50 (94%), Positives = 49/50 (98%)
 Frame = +2

Query: 284 KAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 433
           KAPDS+S K+NGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 23  KAPDSISGKINGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 72


>gb|AFV30230.1| ATP-dependent RNA helicase [Medicago sativa]
          Length = 427

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/50 (96%), Positives = 48/50 (96%)
 Frame = +2

Query: 284 KAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 433
           KAPDSV AKVNGES KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 22  KAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71


>gb|AFK41905.1| unknown [Medicago truncatula]
          Length = 427

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/50 (96%), Positives = 48/50 (96%)
 Frame = +2

Query: 284 KAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 433
           KAPDSV AKVNGES KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 22  KAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71


>ref|XP_002337696.1| predicted protein [Populus trichocarpa]
          Length = 247

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 50/72 (69%), Positives = 53/72 (73%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MGET+                 KAPDSV AKVNGE+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEDDKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           +IVDSGFEHPSE
Sbjct: 61  SIVDSGFEHPSE 72


>ref|XP_002324856.1| hypothetical protein POPTR_0018s01620g [Populus trichocarpa]
           gi|222866290|gb|EEF03421.1| hypothetical protein
           POPTR_0018s01620g [Populus trichocarpa]
          Length = 428

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 50/72 (69%), Positives = 53/72 (73%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MGET+                 KAPDSV AKVNGE+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEDDKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           +IVDSGFEHPSE
Sbjct: 61  SIVDSGFEHPSE 72


>ref|XP_002309623.1| hypothetical protein POPTR_0006s26940g [Populus trichocarpa]
           gi|222855599|gb|EEE93146.1| hypothetical protein
           POPTR_0006s26940g [Populus trichocarpa]
          Length = 428

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 50/72 (69%), Positives = 53/72 (73%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MGET+                 KAPDSV AKVNGE+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDTYEEELLDYEEEDEKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           +IVDSGFEHPSE
Sbjct: 61  SIVDSGFEHPSE 72


>gb|ABK93079.1| unknown [Populus trichocarpa]
          Length = 428

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 50/72 (69%), Positives = 53/72 (73%)
 Frame = +2

Query: 218 MGETKXXXXXXXXXXXXXXXXXKAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 397
           MGET+                 KAPDSV AKVNGE+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDTYEEELLDYEEEDEKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 398 AIVDSGFEHPSE 433
           +IVDSGFEHPSE
Sbjct: 61  SIVDSGFEHPSE 72


>ref|XP_003588757.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355477805|gb|AES59008.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 427

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/50 (96%), Positives = 48/50 (96%)
 Frame = +2

Query: 284 KAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 433
           KAPDSV AKVNGES KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 22  KAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71


>gb|ESW09025.1| hypothetical protein PHAVU_009G093800g [Phaseolus vulgaris]
          Length = 427

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 47/50 (94%), Positives = 48/50 (96%)
 Frame = +2

Query: 284 KAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 433
           KAPDSV AKVNGE+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 22  KAPDSVGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71


>gb|AGV54745.1| DEAD-box ATP-dependent RNA helicase 56-like protein [Phaseolus
           vulgaris]
          Length = 427

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 47/50 (94%), Positives = 48/50 (96%)
 Frame = +2

Query: 284 KAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 433
           KAPDSV AKVNGE+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 22  KAPDSVGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71


>gb|AGV54235.1| DEAD-box ATP-dependent RNA helicase 56 [Phaseolus vulgaris]
          Length = 427

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 47/50 (94%), Positives = 48/50 (96%)
 Frame = +2

Query: 284 KAPDSVSAKVNGESAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 433
           KAPDSV AKVNGE+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE
Sbjct: 22  KAPDSVGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSE 71


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