BLASTX nr result
ID: Catharanthus23_contig00007014
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00007014
(1628 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ... 481 e-133
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik... 466 e-128
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik... 462 e-127
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592... 461 e-127
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu... 461 e-127
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [... 457 e-126
ref|XP_002331405.1| predicted protein [Populus trichocarpa] 456 e-125
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis] 454 e-125
emb|CBI33811.3| unnamed protein product [Vitis vinifera] 452 e-124
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik... 451 e-124
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik... 450 e-124
gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus... 449 e-123
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi... 447 e-123
gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao] 444 e-122
gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea] 444 e-122
ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago trun... 442 e-121
gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao] 440 e-120
gb|AFK45334.1| unknown [Medicago truncatula] 438 e-120
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622... 436 e-119
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr... 436 e-119
>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 443
Score = 481 bits (1237), Expect = e-133
Identities = 250/439 (56%), Positives = 300/439 (68%), Gaps = 10/439 (2%)
Frame = -1
Query: 1514 ISCP------RVGQSLRILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQK 1353
+ CP R Q ++ ++K+Y HY H D+CK RWT+RES+Q+MYARPWQ+
Sbjct: 5 LQCPAKPLANRYQQMEKLTQTETKTQNKIYFHYNHTDSCKSFRWTARESFQFMYARPWQE 64
Query: 1352 VNDFYSDMVKGSASISKLFRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKI 1173
V+DFYS++V G S +LFR + + D + + ED+ K+ELE +DR GRWAR+ FKI
Sbjct: 65 VSDFYSNVVNGRLSFLELFRSQMHFVRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKI 124
Query: 1172 VLSYHGASFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDK 993
LSYHG SFDGWQKQPGL+TVQG+VE+SLGKFVD EGCAVVAGRTDK
Sbjct: 125 DLSYHGGSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDK 184
Query: 992 GVTAFQQVCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLY 813
GV+A +QVCSFYTWRKDV+P +I DAIN++ PGKIR +SV+EVSR FHPNFSAKWRRYLY
Sbjct: 185 GVSALRQVCSFYTWRKDVRPHEIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLY 244
Query: 812 IFPFNNGEESELGSFCKED----AGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGN 645
IFP N+GE+SE SF ED Y + +N + TS EL +KD +E
Sbjct: 245 IFPINDGEDSE-QSFDSEDLENLRSYEKYDEQRNGCAELTSEEHVEELITSDKDELEGAK 303
Query: 644 KPTTFEVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQD 465
KP F + RVNQL+QQLEGKLLSYK+FARDTKASRNVGPPTECF++HARA EA LPC
Sbjct: 304 KPRIFSICRVNQLLQQLEGKLLSYKIFARDTKASRNVGPPTECFIYHARATEARLPCPDH 363
Query: 464 KIPTKVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPD 285
KVMC+ELVANRFLRKMVRVLVAT +R LKLMD PD
Sbjct: 364 GEGRKVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPD 423
Query: 284 GLCLVDVGYTEFNPNNCFI 228
GLCL DVGYTEF+ C +
Sbjct: 424 GLCLFDVGYTEFDAQICIV 442
>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
Length = 436
Score = 466 bits (1200), Expect = e-128
Identities = 248/438 (56%), Positives = 296/438 (67%), Gaps = 8/438 (1%)
Frame = -1
Query: 1517 MISCPRVGQSLRILMENQP---LKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVN 1347
M+ P ++LR LMEN + KV+ HY H D+CKFSRWTSRE Y++MYARPW KV
Sbjct: 1 MLRYPTTVRTLRNLMENSSPTATQQKVHFHYNHTDSCKFSRWTSRECYEFMYARPWHKVV 60
Query: 1346 DFYSDMVKGSASISKLFRKENLVIHDASVLIEDNPKSELEKIPAKDRT----GRWARLTF 1179
DFY+DMVKG S+S LF KE H+ + + ED+ KSEL IP KD++ GRWAR F
Sbjct: 61 DFYADMVKGHISLSGLFGKETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARANF 120
Query: 1178 KIVLSYHGASFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRT 999
IVLSYHG SFDGWQKQP L+TVQG+VERSLG+FVD E CA+VAGRT
Sbjct: 121 MIVLSYHGGSFDGWQKQPDLNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAGRT 180
Query: 998 DKGVTAFQQVCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRY 819
DKGV+A QQVCSFYTWRKDVK + + A++ PGKIR VS+ +VSREFHPNFSAKWR Y
Sbjct: 181 DKGVSASQQVCSFYTWRKDVKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWRHY 240
Query: 818 LYIFPFNNG-EESELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNK 642
LYIFP ++ E + G +D+ N Q + S E+ +N D + GNK
Sbjct: 241 LYIFPIDDVLGEKQGGQIWIDDS--TNVHQQNECDKSDVDKSNVNEINNEN-DKLVHGNK 297
Query: 641 PTTFEVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDK 462
PT FEV +VN+L+ QLEGKLLSYKMFARDTKASRN+GPPTECF+FHARA E +PC +D
Sbjct: 298 PTKFEVGKVNRLLGQLEGKLLSYKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKDG 357
Query: 461 IPTKVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDG 282
K MCIELVANRFLRKMVRVLVAT +R LKLMD PDG
Sbjct: 358 SHMKTMCIELVANRFLRKMVRVLVATAIREAAAGADDDALLKLMDATCRRATAPPAPPDG 417
Query: 281 LCLVDVGYTEFNPNNCFI 228
LCLVDVGYT+++ +C I
Sbjct: 418 LCLVDVGYTDYDIRHCLI 435
>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
Length = 433
Score = 462 bits (1189), Expect = e-127
Identities = 248/426 (58%), Positives = 288/426 (67%), Gaps = 7/426 (1%)
Frame = -1
Query: 1484 RILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASIS 1305
R LMEN+ ++KVY HY H KFSRWT+RES+Q+MY RPWQ+V DFYS++V G S+
Sbjct: 11 RDLMENEK-ENKVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLL 69
Query: 1304 KLFRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQP 1125
L E IHD + +E + K+E + KDR GRWARLTFKIVLSYHGASFDGWQKQP
Sbjct: 70 GLLGIETHPIHDGEI-VEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQP 128
Query: 1124 GLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSFYTWRK 945
GL+TVQG+VE SLG+FVD EG VAGRTDKGVTA QQVCSFYTW+K
Sbjct: 129 GLNTVQGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKK 188
Query: 944 DVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFC 765
DVK Q I DAIN PGK+R +SV+EVSR FHPNFSAKWR Y YIFP N+G++ E S
Sbjct: 189 DVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISEN 248
Query: 764 KED-------AGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQL 606
+ D YG Q + Y G L D+ ES KP+TF +SRV+QL
Sbjct: 249 EMDIQKISFNEKYGE--QGSECPAQYNGGENTENLIFDDDGEFESRKKPSTFSISRVDQL 306
Query: 605 MQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTKVMCIELVA 426
++QLEGKLLSYK+FARDTKASRN+GPPTECF+FHARA EA L D TKVMCIELVA
Sbjct: 307 LRQLEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQFSDDGEGTKVMCIELVA 366
Query: 425 NRFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFN 246
NRFLRKMVRVLVAT +R LKLMD PDGLCL+DVG+TEF+
Sbjct: 367 NRFLRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTEFD 426
Query: 245 PNNCFI 228
P CFI
Sbjct: 427 PQICFI 432
>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
Length = 436
Score = 461 bits (1186), Expect = e-127
Identities = 245/438 (55%), Positives = 296/438 (67%), Gaps = 8/438 (1%)
Frame = -1
Query: 1517 MISCPRVGQSLRILMENQP---LKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVN 1347
M+ P ++LR LMEN + KV+ HY H D+CKFSRWTSRE Y++MYAR W KV
Sbjct: 1 MLRYPTTVRTLRNLMENPSQTAAQQKVHFHYNHTDSCKFSRWTSRECYEFMYARLWHKVV 60
Query: 1346 DFYSDMVKGSASISKLFRKENLVIHDASVLIEDNPKSELEKIPAKDRT----GRWARLTF 1179
DFY+DMVKG S+S+LF KE H+ + + ED+ KSEL IP KD++ GRWAR F
Sbjct: 61 DFYADMVKGHTSLSRLFGKETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARANF 120
Query: 1178 KIVLSYHGASFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRT 999
IVLSYHG SFDGWQKQP L+TVQG+VERSLG+FVD E CA+VAGRT
Sbjct: 121 MIVLSYHGGSFDGWQKQPDLNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAGRT 180
Query: 998 DKGVTAFQQVCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRY 819
DKGV+A QQVCSFYTWRKDVK + + A++ PGKIR VS+ +VSREFHPNFSAKWR Y
Sbjct: 181 DKGVSASQQVCSFYTWRKDVKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWRHY 240
Query: 818 LYIFPFNNG-EESELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNK 642
LYIFP ++ E + G + G + Q + S E+ ++N + + GNK
Sbjct: 241 LYIFPIDDVLGEKQRGQIWID--GSTDVHQQNECGKSDIDKSNVNEINDENNE-LVHGNK 297
Query: 641 PTTFEVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDK 462
PT FEV +VN+L+ QLEGKLLSYKMFARDTKASRN+GPPTECF+FHARA E +PC +D
Sbjct: 298 PTKFEVGKVNRLLGQLEGKLLSYKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKDG 357
Query: 461 IPTKVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDG 282
K MCIELVANRFLRKMVRVLVAT +R LKLMD PDG
Sbjct: 358 SLMKTMCIELVANRFLRKMVRVLVATAIREAAAGADDDALLKLMDATCRRATAPPAPPDG 417
Query: 281 LCLVDVGYTEFNPNNCFI 228
LCLVDVGYT+++ +C I
Sbjct: 418 LCLVDVGYTDYDIRHCLI 435
>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
gi|550318755|gb|ERP50021.1| hypothetical protein
POPTR_0018s14400g [Populus trichocarpa]
Length = 448
Score = 461 bits (1186), Expect = e-127
Identities = 244/425 (57%), Positives = 287/425 (67%), Gaps = 7/425 (1%)
Frame = -1
Query: 1481 ILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISK 1302
++ME Q DKVY Y H D+CKFSRWT+RES+Q+M+ARPWQ+V DFYS V G S+ +
Sbjct: 28 VVMEAQ--NDKVYVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLE 85
Query: 1301 LFRKENLVIH-DASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQP 1125
LF + +H D + N LE + D++GRWAR+TFKIVLSYHG SFDGWQKQP
Sbjct: 86 LFGTQAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQP 145
Query: 1124 GLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSFYTWRK 945
GL+TVQG+VE+SLG+FVD EGCA VAGRTDKGV+A QQVCSFYTWRK
Sbjct: 146 GLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRK 205
Query: 944 DVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFC 765
DVKP +I DAIN+ PGK+R S++EVSR FHPNFSAKWRRYLYIFP N+GE E
Sbjct: 206 DVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENRE---EI 262
Query: 764 KEDAGYGNTFQPQNLSSNYTS-GSTDCELEEDN-----KDGIESGNKPTTFEVSRVNQLM 603
+ + G N +N G E +N +D ++ KP +F V RVNQL+
Sbjct: 263 EGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLL 322
Query: 602 QQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTKVMCIELVAN 423
QQLEGKLLSYKMFARDTKASRNVGPPTECFL+HARA E LP + +VMC+EL+AN
Sbjct: 323 QQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIAN 382
Query: 422 RFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFNP 243
RFLRKMVRVLVAT VR LKLMD PDGLCLVDVGYTEF+P
Sbjct: 383 RFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDP 442
Query: 242 NNCFI 228
NC I
Sbjct: 443 RNCLI 447
>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
family protein [Populus trichocarpa]
Length = 457
Score = 457 bits (1176), Expect = e-126
Identities = 245/434 (56%), Positives = 288/434 (66%), Gaps = 16/434 (3%)
Frame = -1
Query: 1481 ILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISK 1302
++ME Q DKVY Y H D+CKFSRWT+RES+Q+M+ARPWQ+V DFYS V G S+ +
Sbjct: 28 VVMEAQ--NDKVYVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLE 85
Query: 1301 LF----------RKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGA 1152
LF +K + V D + N LE + D++GRWAR+TFKIVLSYHG
Sbjct: 86 LFGTQVFFTMELKKAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGG 145
Query: 1151 SFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQ 972
SFDGWQKQPGL+TVQG+VE+SLG+FVD EGCA VAGRTDKGV+A QQ
Sbjct: 146 SFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQ 205
Query: 971 VCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNG 792
VCSFYTWRKDVKP +I DAIN+ PGK+R S++EVSR FHPNFSAKWRRYLYIFP N+G
Sbjct: 206 VCSFYTWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDG 265
Query: 791 EESELGSFCKEDAGYGNTFQPQNLSSNYTS-GSTDCELEEDN-----KDGIESGNKPTTF 630
E E + + G N +N G E +N +D ++ KP +F
Sbjct: 266 ENRE---EIEGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSF 322
Query: 629 EVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTK 450
V RVNQL+QQLEGKLLSYKMFARDTKASRNVGPPTECFL+HARA E LP + +
Sbjct: 323 SVCRVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIR 382
Query: 449 VMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLV 270
VMC+EL+ANRFLRKMVRVLVAT VR LKLMD PDGLCLV
Sbjct: 383 VMCVELIANRFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLV 442
Query: 269 DVGYTEFNPNNCFI 228
DVGYTEF+P NC I
Sbjct: 443 DVGYTEFDPRNCLI 456
>ref|XP_002331405.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 456 bits (1172), Expect = e-125
Identities = 242/425 (56%), Positives = 283/425 (66%), Gaps = 16/425 (3%)
Frame = -1
Query: 1454 DKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLF------- 1296
DKVY Y H D+CKFSRWT+RES+Q+M+ARPWQ+V DFYS V G S+ +LF
Sbjct: 6 DKVYVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFGTQVFFT 65
Query: 1295 ---RKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQP 1125
+K + V D + N LE + D++GRWAR+TFKIVLSYHG SFDGWQKQP
Sbjct: 66 MELKKAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQP 125
Query: 1124 GLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSFYTWRK 945
GL+TVQG+VE+SLG+FVD EGCA VAGRTDKGV+A QQVCSFYTWRK
Sbjct: 126 GLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRK 185
Query: 944 DVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFC 765
DVKP +I DAIN+ PGK+R S++EVSR FHPNFSAKWRRYLYIFP N+GE E
Sbjct: 186 DVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENRE---EI 242
Query: 764 KEDAGYGNTFQPQNLSSNYTS-GSTDCELEEDN-----KDGIESGNKPTTFEVSRVNQLM 603
+ + G N +N G E +N +D ++ KP +F V RVNQL+
Sbjct: 243 EGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLL 302
Query: 602 QQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTKVMCIELVAN 423
QQLEGKLLSYKMFARDTKASRNVGPPTECFL+HARA E LP + +VMC+EL+AN
Sbjct: 303 QQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIAN 362
Query: 422 RFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFNP 243
RFLRKMVRVLVAT VR LKLMD PDGLCLVDVGYTEF+P
Sbjct: 363 RFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVGYTEFDP 422
Query: 242 NNCFI 228
NC I
Sbjct: 423 RNCLI 427
>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 446
Score = 454 bits (1167), Expect = e-125
Identities = 236/413 (57%), Positives = 286/413 (69%), Gaps = 3/413 (0%)
Frame = -1
Query: 1454 DKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLF---RKEN 1284
+K Y HY H+D C+FSRWT+RESYQ+MY RPWQ+V DFYS++V G+ S S LF +K
Sbjct: 35 NKDYVHYNHSDPCRFSRWTARESYQFMYGRPWQQVLDFYSNLVNGTTSFSSLFPLHKKYQ 94
Query: 1283 LVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGLDTVQG 1104
+ D I + +++ +++R+GRWAR TFK+VL YHGASFDGWQKQPGL+TVQG
Sbjct: 95 VDDDDYDAEIPEISDDKVKLKKSEERSGRWARATFKVVLGYHGASFDGWQKQPGLNTVQG 154
Query: 1103 IVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSFYTWRKDVKPQQI 924
+VERSLG+FVD E C VVAGRTDKGVTA QQVCSFYTWRKD+ Q I
Sbjct: 155 LVERSLGRFVDEKKAQLLKDKCLPLEACTVVAGRTDKGVTALQQVCSFYTWRKDITCQDI 214
Query: 923 GDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFCKEDAGYG 744
+AINN GK++A SV+EVSR FHPNFSAKWRRYLYIFPFN+ E+ E + E+
Sbjct: 215 EEAINNAALGKLKAKSVSEVSRVFHPNFSAKWRRYLYIFPFNDEEDEEQSNKNGENL--- 271
Query: 743 NTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGKLLSYKMF 564
T++ + + L D+ + +ESG KP++F VSRV+QL++ LEGKLLSYKMF
Sbjct: 272 ETYEKIESGCGEWNDESFGNLIIDDSEELESGKKPSSFSVSRVDQLLRLLEGKLLSYKMF 331
Query: 563 ARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTKVMCIELVANRFLRKMVRVLVAT 384
ARDTKASRN GPPTECF++HARAAEA LP K+MC+ELVANRFLRKMVRVLVAT
Sbjct: 332 ARDTKASRNEGPPTECFIYHARAAEARLPTSDCTEGRKIMCVELVANRFLRKMVRVLVAT 391
Query: 383 VVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFNPNNCFIS 225
+R LKLMD PDGLCLVDVGY+EF PNNC IS
Sbjct: 392 SIREAAAGAEEDALLKLMDATCRRATAPPAPPDGLCLVDVGYSEFKPNNCLIS 444
>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
Length = 402
Score = 452 bits (1164), Expect = e-124
Identities = 243/419 (57%), Positives = 282/419 (67%)
Frame = -1
Query: 1484 RILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASIS 1305
R LMEN+ ++KVY HY H KFSRWT+RES+Q+MY RPWQ+V DFYS++V G S+
Sbjct: 11 RDLMENEK-ENKVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLL 69
Query: 1304 KLFRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQP 1125
L E IHD + +E + K+E + KDR GRWARLTFKIVLSYHGASFDGWQKQP
Sbjct: 70 GLLGIETHPIHDGEI-VEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQP 128
Query: 1124 GLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSFYTWRK 945
GL+TVQG+VE SLG+FVD EG VAGRTDKGVTA QQVCSFYTW+K
Sbjct: 129 GLNTVQGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKK 188
Query: 944 DVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFC 765
DVK Q I DAIN PGK+R +SV+EVSR FHPNFSAKWR Y YIFP N+G++ E S
Sbjct: 189 DVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQIS-- 246
Query: 764 KEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGK 585
N Q +S N E+ KP+TF +SRV+QL++QLEGK
Sbjct: 247 ------ENEMDIQKISFN------------------ENRKKPSTFSISRVDQLLRQLEGK 282
Query: 584 LLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTKVMCIELVANRFLRKM 405
LLSYK+FARDTKASRN+GPPTECF+FHARA EA L D TKVMCIELVANRFLRKM
Sbjct: 283 LLSYKIFARDTKASRNIGPPTECFVFHARATEARLQFSDDGEGTKVMCIELVANRFLRKM 342
Query: 404 VRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFNPNNCFI 228
VRVLVAT +R LKLMD PDGLCL+DVG+TEF+P CFI
Sbjct: 343 VRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTEFDPQICFI 401
>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
Length = 444
Score = 451 bits (1159), Expect = e-124
Identities = 241/437 (55%), Positives = 287/437 (65%), Gaps = 7/437 (1%)
Frame = -1
Query: 1517 MISCPRVGQSLRILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFY 1338
++S G L+ILMEN+ + K Y HY H D C+ +RWT+RESYQ+MY RPWQ+V DFY
Sbjct: 9 LVSPSSAGFGLKILMENRAQR-KDYLHYNHTDRCRSARWTARESYQFMYGRPWQEVLDFY 67
Query: 1337 SDMVKGSASISKLFRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYH 1158
S V G S+S L E HD + +EL + KD+TGRWAR TFKIVLSY
Sbjct: 68 SHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATFKIVLSYD 127
Query: 1157 GASFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAF 978
G SFDGWQKQPGL+TVQG+VERSLGKFVD EGCA+VAGRTDKGVTA
Sbjct: 128 GNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTAL 187
Query: 977 QQVCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFN 798
+QVCSFYTWR DVKPQ I D+IN+ PGK+R SV++VSR FHPNFSAKWRRYLYI P N
Sbjct: 188 RQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLN 247
Query: 797 NGEESELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCE-------LEEDNKDGIESGNKP 639
+GE E S E+ + +N S C + N + + S +KP
Sbjct: 248 DGENMEPDSTTWENV---ENREEENFVKIEASNGEKCVDGIHDNLVLSPNDEELVSADKP 304
Query: 638 TTFEVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKI 459
TF ++RVNQL+++LEGKLLSYKMFARDTKASRN GPPTECF++HARAAE LPC + +
Sbjct: 305 QTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGV 364
Query: 458 PTKVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGL 279
VMC+ELVANRFLRKMVRVLVAT +R L+LMD PDGL
Sbjct: 365 GRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGL 424
Query: 278 CLVDVGYTEFNPNNCFI 228
LVDVGYT+F+ CFI
Sbjct: 425 SLVDVGYTDFDSQICFI 441
>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
Length = 444
Score = 450 bits (1157), Expect = e-124
Identities = 241/437 (55%), Positives = 286/437 (65%), Gaps = 7/437 (1%)
Frame = -1
Query: 1517 MISCPRVGQSLRILMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFY 1338
++S G L+ILMEN+ + K Y HY H D C+ +RWT+RESYQ+MY RPWQ+V DFY
Sbjct: 9 LVSPSSAGFGLKILMENRAQR-KDYLHYNHTDRCRSARWTARESYQFMYGRPWQEVLDFY 67
Query: 1337 SDMVKGSASISKLFRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYH 1158
S V G S+S L E HD + +EL + KD+TGRWAR TFKIVLSY
Sbjct: 68 SHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATFKIVLSYD 127
Query: 1157 GASFDGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAF 978
G SFDGWQKQPGL+TVQG+VERSLGKFVD EGCA+VAGRTDKGVTA
Sbjct: 128 GNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTAL 187
Query: 977 QQVCSFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFN 798
+QVCSFYTWR DVKPQ I D+IN+ PGK+R SV++VSR FHPNFSAKWRRYLYI P N
Sbjct: 188 RQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLN 247
Query: 797 NGEESELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCE-------LEEDNKDGIESGNKP 639
+GE E S E+ + +N S C + N + S +KP
Sbjct: 248 DGENMEPDSTTWENV---ENREEENFVKIEASNGEKCVDGIHDNLVLSPNDQELVSADKP 304
Query: 638 TTFEVSRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKI 459
TF ++RVNQL+++LEGKLLSYKMFARDTKASRN GPPTECF++HARAAE LPC + +
Sbjct: 305 QTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGV 364
Query: 458 PTKVMCIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGL 279
VMC+ELVANRFLRKMVRVLVAT +R L+LMD PDGL
Sbjct: 365 GRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGL 424
Query: 278 CLVDVGYTEFNPNNCFI 228
LVDVGYT+F+ CFI
Sbjct: 425 SLVDVGYTDFDSQICFI 441
>gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
Length = 440
Score = 449 bits (1154), Expect = e-123
Identities = 231/404 (57%), Positives = 277/404 (68%)
Frame = -1
Query: 1439 HYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLFRKENLVIHDASV 1260
HY H D +++RWT+RES+Q+MYARPWQ+VNDFY ++V+ + S+S LF + ++ H+ +
Sbjct: 50 HYNHTDPSEYARWTARESFQFMYARPWQRVNDFYFNVVRANLSLSLLFGPQTILDHNDTG 109
Query: 1259 LIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGLDTVQGIVERSLGK 1080
+ + +SELE + ++DR+GRWAR TFKI+LSYHG SFDGWQKQPGL+TVQGIVE SLGK
Sbjct: 110 IAALSDQSELESVASEDRSGRWARRTFKIILSYHGGSFDGWQKQPGLNTVQGIVEASLGK 169
Query: 1079 FVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSFYTWRKDVKPQQIGDAINNTE 900
FVD EGCAVVAGRTDKGVT QQVCSFYTW+KDVKP+ I DAIN
Sbjct: 170 FVDEKKTQLLKDKGLPIEGCAVVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINQAA 229
Query: 899 PGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFCKEDAGYGNTFQPQNL 720
GK+R +SV+EVSR FHPNFSAKWR YLYIFP NG + S G +
Sbjct: 230 LGKLRVISVSEVSRVFHPNFSAKWRHYLYIFPLTNGYRDQSNS-------NGESCDISKY 282
Query: 719 SSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGKLLSYKMFARDTKASR 540
+ + S S KDGIE+ K F VS+VN L+++LEGKLLSYKMFARDTKASR
Sbjct: 283 NEMHDSSS---------KDGIENQEKSYLFSVSKVNVLLRKLEGKLLSYKMFARDTKASR 333
Query: 539 NVGPPTECFLFHARAAEAFLPCEQDKIPTKVMCIELVANRFLRKMVRVLVATVVRXXXXX 360
N GPPTECF++HARA E LP TKVMC+ELVANRFLRKMVRVLVAT +R
Sbjct: 334 NDGPPTECFVYHARAMEVKLPTTDCGEETKVMCVELVANRFLRKMVRVLVATSIREAAAG 393
Query: 359 XXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFNPNNCFI 228
+KLMD PDGLCLVDVGYTEF+P CFI
Sbjct: 394 AEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYTEFDPQKCFI 437
>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X1 [Glycine max]
Length = 444
Score = 447 bits (1151), Expect = e-123
Identities = 230/415 (55%), Positives = 281/415 (67%), Gaps = 1/415 (0%)
Frame = -1
Query: 1469 NQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLFRK 1290
N + + + HY H K++RWT+RES+++MYARPWQ+VNDFY ++V+ + S+ LF
Sbjct: 42 NNLRQTETHVHYNHTHPSKYARWTARESFEFMYARPWQRVNDFYLNIVRANLSLPLLFGA 101
Query: 1289 ENLVI-HDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGLDT 1113
+ LV+ H+ + + + SELE + ++DR+GRWAR TFKI+LSYHG SFDGWQKQPGL+T
Sbjct: 102 QTLVVDHNDTGIAALSGSSELESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGLNT 161
Query: 1112 VQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSFYTWRKDVKP 933
VQ IVE SLGKFVD EGCA+VAGRTDKGVT QQVCSFYTW+KDVKP
Sbjct: 162 VQSIVEGSLGKFVDEKKTQLLKDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWKKDVKP 221
Query: 932 QQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFCKEDA 753
+ I DAIN+ PGK+R +SV+EVSR FHPNFSAKWRRYLYIFP NG
Sbjct: 222 RDIEDAINHAAPGKLRVISVSEVSRVFHPNFSAKWRRYLYIFPLTNG------------- 268
Query: 752 GYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGKLLSY 573
G T Q + Y S + + +KD +E+ K F +S+VN+L+++LEGKLLSY
Sbjct: 269 --GYTDQSSDNGEFYDSFKYNEIHDSASKDELENEKKSYAFSISKVNRLLRKLEGKLLSY 326
Query: 572 KMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTKVMCIELVANRFLRKMVRVL 393
KMFARDTKASRN GPPTECF++HARA E LP TKVMC+ELVANRFLRKMVRVL
Sbjct: 327 KMFARDTKASRNDGPPTECFVYHARAMEVKLPATDHGEETKVMCVELVANRFLRKMVRVL 386
Query: 392 VATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFNPNNCFI 228
VAT +R +KLMD PDGLCLVDVGYTEF P CFI
Sbjct: 387 VATSIREAAAGAEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYTEFEPQKCFI 441
>gb|EOY32186.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
Length = 444
Score = 444 bits (1143), Expect = e-122
Identities = 237/426 (55%), Positives = 287/426 (67%), Gaps = 8/426 (1%)
Frame = -1
Query: 1478 LMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKL 1299
+MEN+ ++KVY HY H+D+C +RWT+RESY++MY R WQ V DFYS++V G ++S L
Sbjct: 32 VMENEA-ENKVYVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTL 90
Query: 1298 FRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGL 1119
F E + D+ + + K E R+GRW R+TFKI++SY+G +FDGWQKQPGL
Sbjct: 91 FGTETSIHDDSETVEVSDEKGE--------RSGRWERVTFKIIISYNGGAFDGWQKQPGL 142
Query: 1118 DTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSFYTWRKDV 939
+TVQ IVERSLG+FVD EGCAVVAGRTDKGV+A +QVCSFYTWRKDV
Sbjct: 143 NTVQEIVERSLGRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDV 202
Query: 938 KPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGE--------ES 783
KP I DAIN+ PGK+R VSV+EVSR FHPNFSAKWR YLYIFP +N E +
Sbjct: 203 KPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKK 262
Query: 782 ELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLM 603
E+ +F D Y Q N + + + DN G+E+ NKPT F V RVNQL+
Sbjct: 263 EVENFI-SDGNYNE--QRNGYLENIRWENVENLIISDNM-GLEAANKPTRFSVCRVNQLL 318
Query: 602 QQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTKVMCIELVAN 423
QQLE KLLSYKMFARDTKASRN+GPPTECF++HARAAEA +PC +VMC+ELVAN
Sbjct: 319 QQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCSDHGEGREVMCVELVAN 378
Query: 422 RFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFNP 243
RFLRKMVRVLVAT +R LKLM PDGLCLVDVGYTEF+P
Sbjct: 379 RFLRKMVRVLVATSIREAAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEFDP 438
Query: 242 NNCFIS 225
NC +S
Sbjct: 439 QNCLLS 444
>gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]
Length = 406
Score = 444 bits (1142), Expect = e-122
Identities = 231/432 (53%), Positives = 290/432 (67%), Gaps = 12/432 (2%)
Frame = -1
Query: 1487 LRILMENQPLKD----KVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKG 1320
LR LME L K Y HY+HNDA RWT++ESYQ+MY+RPWQ+VN FY ++V G
Sbjct: 3 LRNLMEGAALPSHTPAKDYVHYQHNDAFSLCRWTAKESYQFMYSRPWQRVNCFYLELVNG 62
Query: 1319 SASISKLFRKENLVIHDASVLIE--DNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASF 1146
++S+LF KE IHD ++ + P + L P + RTGRWARLTFKI+LSYHG SF
Sbjct: 63 RRTLSELFPKEKHAIHDTDRTLDVYNYPSASL---PNEQRTGRWARLTFKIILSYHGYSF 119
Query: 1145 DGWQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVC 966
DGWQKQPGL+TVQG++E SLG F+D +GCAVVAGRTDKGV+A QVC
Sbjct: 120 DGWQKQPGLNTVQGLIENSLGVFIDEKKALQLKEKNLPRDGCAVVAGRTDKGVSALGQVC 179
Query: 965 SFYTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNN--- 795
SFYTWRK+V+ + I +AIN++ PGK+R SV++VSREFHPNFSAKWRRYLYIFP N+
Sbjct: 180 SFYTWRKEVEAEDIMEAINDSAPGKLRVTSVSQVSREFHPNFSAKWRRYLYIFPLNHEYR 239
Query: 794 ---GEESELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEV 624
+SE FC ++ D++ G+++G KP FEV
Sbjct: 240 DREAFKSEKNDFCGDNC-------------------------LDDQSGMQTGCKPLNFEV 274
Query: 623 SRVNQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTKVM 444
SRV+QL+ LEGKLLS++MFARDTKASR++GPPTECF+FHARAAEA+LPC +++ +K+M
Sbjct: 275 SRVSQLLLHLEGKLLSFRMFARDTKASRSIGPPTECFIFHARAAEAYLPCSEEETKSKIM 334
Query: 443 CIELVANRFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDV 264
C+ELVA+RFLRKMVRVLVAT +R L+LM PDGLCLVDV
Sbjct: 335 CVELVADRFLRKMVRVLVATAIREAAAGADEDMLLQLMGATCRRATAPPAPPDGLCLVDV 394
Query: 263 GYTEFNPNNCFI 228
GYTEF+ C I
Sbjct: 395 GYTEFDRKVCLI 406
>ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago truncatula]
gi|355524623|gb|AET05077.1| tRNA pseudouridine synthase A
[Medicago truncatula]
Length = 400
Score = 442 bits (1137), Expect = e-121
Identities = 231/417 (55%), Positives = 281/417 (67%), Gaps = 1/417 (0%)
Frame = -1
Query: 1475 MENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLF 1296
ME+Q +D + HY H K++RW +RES+++MYARPWQ+VN FYS+ V+G+ S+ LF
Sbjct: 1 MEHQSERDSHHVHYNHTHPSKYARWNARESFEFMYARPWQRVNHFYSNTVRGNFSLPLLF 60
Query: 1295 RKENLVIHDASVLIEDNPK-SELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGL 1119
+ + L +HD+ V P+ SE + +KDR+G+WAR FKI+LSYHG SFDGWQKQP L
Sbjct: 61 QSQTLPVHDSRV-----PEISEFQSGASKDRSGKWARFNFKILLSYHGGSFDGWQKQPNL 115
Query: 1118 DTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSFYTWRKDV 939
+TVQ +VE SLGKFVD +GCA VAGRTDKGVTA QQVCSFYTW+KD+
Sbjct: 116 NTVQSVVEVSLGKFVDENKTQLLKDKGLPIQGCAAVAGRTDKGVTALQQVCSFYTWKKDI 175
Query: 938 KPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFCKE 759
KP++I DAIN+ PGK+R VSV EVSR FHPNFSAKWRRYLYIFP +G++ +
Sbjct: 176 KPREIEDAINDAAPGKLRVVSVYEVSRAFHPNFSAKWRRYLYIFPLTDGQD--------K 227
Query: 758 DAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGKLL 579
D GN + N S D+KD +E NK F V +VN+L+Q+LEGK+L
Sbjct: 228 DQSGGNGESCDSFIYNEICDS-------DSKDELEKENKSYVFGVRKVNRLLQKLEGKML 280
Query: 578 SYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTKVMCIELVANRFLRKMVR 399
SYKMFARDTKASRN GPPTECF+ HARA EA LP ++ T+VMCIELVANRFLRKMVR
Sbjct: 281 SYKMFARDTKASRNDGPPTECFVHHARAMEAKLPITENGEETRVMCIELVANRFLRKMVR 340
Query: 398 VLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFNPNNCFI 228
VLVAT +R LKLMD PDGLCLVDVGY EF CFI
Sbjct: 341 VLVATTIREAAAGAEDDALLKLMDATCRRATAPPAPPDGLCLVDVGYAEFEREKCFI 397
>gb|EOY32187.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
Length = 446
Score = 440 bits (1131), Expect = e-120
Identities = 237/428 (55%), Positives = 288/428 (67%), Gaps = 10/428 (2%)
Frame = -1
Query: 1478 LMENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKL 1299
+MEN+ ++KVY HY H+D+C +RWT+RESY++MY R WQ V DFYS++V G ++S L
Sbjct: 32 VMENEA-ENKVYVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTL 90
Query: 1298 FRKENLVIHDASVLIEDNPKSELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGL 1119
F E + D+ + + K E R+GRW R+TFKI++SY+G +FDGWQKQPGL
Sbjct: 91 FGTETSIHDDSETVEVSDEKGE--------RSGRWERVTFKIIISYNGGAFDGWQKQPGL 142
Query: 1118 DTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSFYTWRKDV 939
+TVQ IVERSLG+FVD EGCAVVAGRTDKGV+A +QVCSFYTWRKDV
Sbjct: 143 NTVQEIVERSLGRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDV 202
Query: 938 KPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGE--------ES 783
KP I DAIN+ PGK+R VSV+EVSR FHPNFSAKWR YLYIFP +N E +
Sbjct: 203 KPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKK 262
Query: 782 ELGSFCKEDAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLM 603
E+ +F D Y Q N + + + DN G+E+ NKPT F V RVNQL+
Sbjct: 263 EVENFI-SDGNYNE--QRNGYLENIRWENVENLIISDNM-GLEAANKPTRFSVCRVNQLL 318
Query: 602 QQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDK--IPTKVMCIELV 429
QQLE KLLSYKMFARDTKASRN+GPPTECF++HARAAEA +PC + +VMC+ELV
Sbjct: 319 QQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCSVNDHGEGREVMCVELV 378
Query: 428 ANRFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVGYTEF 249
ANRFLRKMVRVLVAT +R LKLM PDGLCLVDVGYTEF
Sbjct: 379 ANRFLRKMVRVLVATSIREAAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDVGYTEF 438
Query: 248 NPNNCFIS 225
+P NC +S
Sbjct: 439 DPQNCLLS 446
>gb|AFK45334.1| unknown [Medicago truncatula]
Length = 400
Score = 438 bits (1126), Expect = e-120
Identities = 230/417 (55%), Positives = 280/417 (67%), Gaps = 1/417 (0%)
Frame = -1
Query: 1475 MENQPLKDKVYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASISKLF 1296
ME+Q +D + HY H K++RW +RES+++MYARPWQ+VN FYS+ V+G+ S+ LF
Sbjct: 1 MEHQSERDSHHVHYNHTHPSKYARWNARESFEFMYARPWQRVNHFYSNTVRGNLSLPLLF 60
Query: 1295 RKENLVIHDASVLIEDNPK-SELEKIPAKDRTGRWARLTFKIVLSYHGASFDGWQKQPGL 1119
+ + L +HD+ V P+ SE + +KDR+G+WAR FKI+LSYHG SFDGWQKQP L
Sbjct: 61 QSQTLPVHDSRV-----PEISEFQSGASKDRSGKWARFNFKILLSYHGGSFDGWQKQPNL 115
Query: 1118 DTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSFYTWRKDV 939
+TVQ +VE SLGKFVD +GCA VAGRTDKGVTA QQVCSFYTW+KD+
Sbjct: 116 NTVQSVVEVSLGKFVDENKTQLLKDKGLPIQGCAAVAGRTDKGVTALQQVCSFYTWKKDI 175
Query: 938 KPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESELGSFCKE 759
KP++I DAIN+ PGK+R VSV EVSR FHPNFSAKWRRYLYIFP +G++ +
Sbjct: 176 KPREIEDAINDAAPGKLRVVSVYEVSRAFHPNFSAKWRRYLYIFPLTDGQD--------K 227
Query: 758 DAGYGNTFQPQNLSSNYTSGSTDCELEEDNKDGIESGNKPTTFEVSRVNQLMQQLEGKLL 579
D GN + N S D+KD +E NK F V +VN+L+Q+LEGK+L
Sbjct: 228 DQSGGNGESCDSFIYNEICDS-------DSKDELEKENKSYVFGVRKVNRLLQKLEGKML 280
Query: 578 SYKMFARDTKASRNVGPPTECFLFHARAAEAFLPCEQDKIPTKVMCIELVANRFLRKMVR 399
SYKMFARDTKASRN GPPTECF+ HARA EA LP ++ T+VMCIELVANRFLRKMVR
Sbjct: 281 SYKMFARDTKASRNDGPPTECFVHHARAMEAKLPITENGEETRVMCIELVANRFLRKMVR 340
Query: 398 VLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVGYTEFNPNNCFI 228
VLVAT +R LKLMD PDGL LVDVGY EF CFI
Sbjct: 341 VLVATTIREAAAGAEDDALLKLMDATCRRATAPPAPPDGLGLVDVGYAEFEREKCFI 397
>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
Length = 454
Score = 436 bits (1121), Expect = e-119
Identities = 238/431 (55%), Positives = 287/431 (66%), Gaps = 12/431 (2%)
Frame = -1
Query: 1484 RILMENQPLKDK-VYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASI 1308
R+ ME+Q +K VY HY H D+CKF+RWT++ESY++M ARPWQ V DFYSD+V G ++
Sbjct: 31 RLSMESQSRAEKKVYVHYNHTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTL 90
Query: 1307 SKLFRKENLVIHDASVLIEDN--PKSELEKIPAKDR--TGRWARLTFKIVLSYHGASFDG 1140
S LF E +S+ ++N P+ E +DR +GRWAR FKIV+SYHG SFDG
Sbjct: 91 SDLFGTERT--RTSSIHNDENEIPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDG 148
Query: 1139 WQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSF 960
WQKQP L+TVQG+VE+ LG FVD EGCA+VAGRTDKGVTA QQVCSF
Sbjct: 149 WQKQPDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSF 208
Query: 959 YTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESE 780
YTWRKDVKP +I DAIN+ PGKIR +SV++VSR FHPNFSAKWRRYLYIFP N+GE+ E
Sbjct: 209 YTWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKRE 268
Query: 779 LGSFCKEDAGYGNTFQPQNLSSNYTSGSTDC-----ELEEDNKDGIESGNKPTTFEVSRV 615
+ + +T S+N S C L +++ G S KP F + RV
Sbjct: 269 QSIDSEVEVENFHT------SNNVGKQSNGCYENIENLLINDEGGFGSHEKPRNFTICRV 322
Query: 614 NQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPC--EQDKIPTKVMC 441
N L+Q+LEGKLLSYK FARDTKASRN+GPPTECF++HARA EA LPC KVMC
Sbjct: 323 NLLLQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMC 382
Query: 440 IELVANRFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVG 261
+ELVANRFLRKMVRVLVAT+VR LKL+D P+GLCLVDVG
Sbjct: 383 VELVANRFLRKMVRVLVATLVREAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVG 442
Query: 260 YTEFNPNNCFI 228
YT F+P N I
Sbjct: 443 YTNFDPQNSLI 453
>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
gi|557556408|gb|ESR66422.1| hypothetical protein
CICLE_v10008288mg [Citrus clementina]
Length = 447
Score = 436 bits (1121), Expect = e-119
Identities = 238/431 (55%), Positives = 287/431 (66%), Gaps = 12/431 (2%)
Frame = -1
Query: 1484 RILMENQPLKDK-VYSHYEHNDACKFSRWTSRESYQYMYARPWQKVNDFYSDMVKGSASI 1308
R+ ME+Q +K VY HY H D+CKF+RWT++ESY++M ARPWQ V DFYSD+V G ++
Sbjct: 24 RLSMESQSRAEKKVYVHYNHTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTL 83
Query: 1307 SKLFRKENLVIHDASVLIEDN--PKSELEKIPAKDR--TGRWARLTFKIVLSYHGASFDG 1140
S LF E +S+ ++N P+ E +DR +GRWAR FKIV+SYHG SFDG
Sbjct: 84 SDLFGTERT--RTSSIHNDENEIPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDG 141
Query: 1139 WQKQPGLDTVQGIVERSLGKFVDXXXXXXXXXXXXXXEGCAVVAGRTDKGVTAFQQVCSF 960
WQKQP L+TVQG+VE+ LG FVD EGCA+VAGRTDKGVTA QQVCSF
Sbjct: 142 WQKQPDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSF 201
Query: 959 YTWRKDVKPQQIGDAINNTEPGKIRAVSVAEVSREFHPNFSAKWRRYLYIFPFNNGEESE 780
YTWRKDVKP +I DAIN+ PGKIR +SV++VSR FHPNFSAKWRRYLYIFP N+GE+ E
Sbjct: 202 YTWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKRE 261
Query: 779 LGSFCKEDAGYGNTFQPQNLSSNYTSGSTDC-----ELEEDNKDGIESGNKPTTFEVSRV 615
+ + +T S+N S C L +++ G S KP F + RV
Sbjct: 262 QSIDSEVEVENFHT------SNNVGKQSNGCYENIENLLINDEGGFGSHEKPRNFTICRV 315
Query: 614 NQLMQQLEGKLLSYKMFARDTKASRNVGPPTECFLFHARAAEAFLPC--EQDKIPTKVMC 441
N L+Q+LEGKLLSYK FARDTKASRN+GPPTECF++HARA EA LPC KVMC
Sbjct: 316 NLLLQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMC 375
Query: 440 IELVANRFLRKMVRVLVATVVRXXXXXXXXXXXLKLMDXXXXXXXXXXXXPDGLCLVDVG 261
+ELVANRFLRKMVRVLVAT+VR LKL+D P+GLCLVDVG
Sbjct: 376 VELVANRFLRKMVRVLVATLVREAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVG 435
Query: 260 YTEFNPNNCFI 228
YT F+P N I
Sbjct: 436 YTNFDPQNSLI 446