BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00006888
         (3248 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...  1505   0.0  
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...  1505   0.0  
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...  1499   0.0  
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...  1475   0.0  
emb|CBI16226.3| unnamed protein product [Vitis vinifera]             1471   0.0  
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]         1415   0.0  
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...  1389   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...  1368   0.0  
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise...  1333   0.0  
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...  1329   0.0  
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...  1324   0.0  
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...  1318   0.0  
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s...  1315   0.0  
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...  1299   0.0  
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr...  1290   0.0  
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus...  1289   0.0  
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...  1287   0.0  
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab...  1285   0.0  
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps...  1282   0.0  
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar...  1272   0.0  

>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score = 1505 bits (3897), Expect = 0.0
 Identities = 750/1020 (73%), Positives = 852/1020 (83%)
 Frame = -3

Query: 3060 QATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLD 2881
            Q + Q TKQPYIEDVGPR+I+SI FS   ESEILK+AEVEVY G+YY+ +KKPI++GLLD
Sbjct: 5    QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64

Query: 2880 PHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLL 2701
            P MGP  K G CETCHG F +CPGHYGYL L LPVY+ GYL  ++DILKCICK CSS+LL
Sbjct: 65   PRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124

Query: 2700 GEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNT 2521
             +K+R   L++MRNP+ E L K++L KKVV++CN + A G+K   CS+CG++NGMVKK  
Sbjct: 125  DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAM-AGGQKTATCSKCGYMNGMVKK-- 181

Query: 2520 KMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCEL 2341
              L I HE+    +   +E   A+S  +E  AS ++VP E++PKVVYSL KN+ DEDCEL
Sbjct: 182  LQLKITHEQG---NRILDEINVAISDKRELRAS-VSVPPELDPKVVYSLFKNMSDEDCEL 237

Query: 2340 LYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDT 2161
            LYLSDRPEKL+                VDGGTQSNENDITERLKRIIQANASLHQE+SD+
Sbjct: 238  LYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDS 297

Query: 2160 SLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKR 1981
            S P KSLN WIDLQ+EVAQYINSDVRG+P   QA RPLSGF QRLKGKQGRFRGNLSGKR
Sbjct: 298  S-PVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKR 356

Query: 1980 VEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKF 1801
            VEYTGRTVISPDPNLKITEVA+PIL+A+ILTYPERVS HNIEKLRQCVRNGPNKYPGAKF
Sbjct: 357  VEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKF 416

Query: 1800 IKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIM 1621
            I+ P    ISL+  +RKR+ADELKFG IVDRHLEDGD +LFNRQPSLHRMSIM HRARIM
Sbjct: 417  IRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 476

Query: 1620 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAS 1441
            PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPK+GEILVAS
Sbjct: 477  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVAS 536

Query: 1440 TQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVL 1261
            TQDFLTSSFLITRKDTFY+RASFSLICSYMGD MDP DLP+PA +KPVELWTGKQLF++L
Sbjct: 537  TQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHML 596

Query: 1260 LRPHAKMRVYLNLTVAEKNYGKPARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGL 1081
            LRP++KMRVY+NLTV EK+Y     ETMCP+DGFVYFRNSELISGQLGKATLGNGNKDGL
Sbjct: 597  LRPYSKMRVYVNLTVTEKSYSGKG-ETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL 655

Query: 1080 YSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGK 901
            YSVLLRDY SHAAATCMNRLAKLSARWIGNHGFSIGIDDV P + L+ +K+ EI   Y K
Sbjct: 656  YSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKK 715

Query: 900  CDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQC 721
            C+D I ++N+GKL +QPG DA  TLEA++T  LN +R +  K+CM  L WRNSPLIMSQC
Sbjct: 716  CEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQC 775

Query: 720  GSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLT 541
            GSKGSPINISQM+ACVGQQSVGGRRAP+GF+DRSLPHFP KSK P AKGFVA+SF+ GL+
Sbjct: 776  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835

Query: 540  ATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYG 361
            ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL++ YD TVRNASA I+QF+YG
Sbjct: 836  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895

Query: 360  DDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEG 181
            DD MDP+QMEEK G+PLNF R+ MKVKATCP G E SLS SEIC+  +ERLS HDMTPEG
Sbjct: 896  DDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEG 955

Query: 180  GCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQLE 1
            GCSEAFR SLS FL +    +L+N  ++L +  ++  G+DR  LEK   NISGIT RQL+
Sbjct: 956  GCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQ 1015


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score = 1505 bits (3897), Expect = 0.0
 Identities = 750/1020 (73%), Positives = 852/1020 (83%)
 Frame = -3

Query: 3060 QATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLD 2881
            Q + Q TKQPYIEDVGPR+I+SI FS   ESEILK+AEVEVY G+YY+ +KKPI++GLLD
Sbjct: 5    QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64

Query: 2880 PHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLL 2701
            P MGP  K G CETCHG F +CPGHYGYL L LPVY+ GYL  ++DILKCICK CSS+LL
Sbjct: 65   PRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124

Query: 2700 GEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNT 2521
             +K+R   L++MRNP+ E L K++L KKVV++CN + A G+K   CS+CG++NGMVKK  
Sbjct: 125  DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAM-AGGQKTATCSKCGYMNGMVKK-- 181

Query: 2520 KMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCEL 2341
              L I HE+    +   +E   A+S  +E  AS ++VP E++PKVVYSL KN+ DEDCEL
Sbjct: 182  LQLKITHEQG---NRILDEINVAISDKRELRAS-VSVPPELDPKVVYSLFKNMSDEDCEL 237

Query: 2340 LYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDT 2161
            LYLSDRPEKL+                VDGGTQSNENDITERLKRIIQANASLHQE+SD+
Sbjct: 238  LYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDS 297

Query: 2160 SLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKR 1981
            S P KSLN WIDLQ+EVAQYINSDVRG+P   QA RPLSGF QRLKGKQGRFRGNLSGKR
Sbjct: 298  S-PVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKR 356

Query: 1980 VEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKF 1801
            VEYTGRTVISPDPNLKITEVA+PIL+A+ILTYPERVS HNIEKLRQCVRNGPNKYPGAKF
Sbjct: 357  VEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKF 416

Query: 1800 IKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIM 1621
            I+ P    ISL+  +RKR+ADELKFG IVDRHLEDGD +LFNRQPSLHRMSIM HRARIM
Sbjct: 417  IRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 476

Query: 1620 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAS 1441
            PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPK+GEILVAS
Sbjct: 477  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVAS 536

Query: 1440 TQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVL 1261
            TQDFLTSSFLITRKDTFY+RASFSLICSYMGD MDP DLP+PA +KPVELWTGKQLF++L
Sbjct: 537  TQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHML 596

Query: 1260 LRPHAKMRVYLNLTVAEKNYGKPARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGL 1081
            LRP++KMRVY+NLTV EK+Y     ETMCP+DGFVYFRNSELISGQLGKATLGNGNKDGL
Sbjct: 597  LRPYSKMRVYVNLTVTEKSYSGKG-ETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL 655

Query: 1080 YSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGK 901
            YSVLLRDY SHAAATCMNRLAKLSARWIGNHGFSIGIDDV P + L+ +K+ EI   Y K
Sbjct: 656  YSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKK 715

Query: 900  CDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQC 721
            C+D I ++N+GKL +QPG DA  TLEA++T  LN +R +  K+CM  L WRNSPLIMSQC
Sbjct: 716  CEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQC 775

Query: 720  GSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLT 541
            GSKGSPINISQM+ACVGQQSVGGRRAP+GF+DRSLPHFP KSK P AKGFVA+SF+ GL+
Sbjct: 776  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835

Query: 540  ATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYG 361
            ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL++ YD TVRNASA I+QF+YG
Sbjct: 836  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895

Query: 360  DDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEG 181
            DD MDP+QMEEK G+PLNF R+ MKVKATCP G E SLS SEIC+  +ERLS HDMTPEG
Sbjct: 896  DDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEG 955

Query: 180  GCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQLE 1
            GCSEAFR SLS FL +    +L+N  ++L +  ++  G+DR  LEK   NISGIT RQL+
Sbjct: 956  GCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQ 1015


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score = 1499 bits (3880), Expect = 0.0
 Identities = 746/1021 (73%), Positives = 852/1021 (83%)
 Frame = -3

Query: 3063 AQATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLL 2884
            AQ + Q TKQPYIEDVGPR+I+SI FS   ESEILK AEVEVY G+YY+ +KKPI++GLL
Sbjct: 4    AQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQNGLL 63

Query: 2883 DPHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLL 2704
            DP MGP  K G CETCHG F +CPGHYGYL L LPVY+ GYL  ++DILKCICK CSS+L
Sbjct: 64   DPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSIL 123

Query: 2703 LGEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKN 2524
            L +K+R   L++MRNP+ E L K++L K+VV++CN + A G+K   CS+CG++NGMVKK 
Sbjct: 124  LDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAM-AGGQKTATCSKCGYMNGMVKK- 181

Query: 2523 TKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCE 2344
               L I HE+    +   +E   A+S  +E  AS ++VP E++PKVVYSL KN+ DEDCE
Sbjct: 182  -LQLKITHEQG---NRILDEINVAISDKRELRAS-VSVPPEIDPKVVYSLFKNMSDEDCE 236

Query: 2343 LLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISD 2164
            LLYLSDRPEKL+                VDGGTQSNENDITERLKRIIQANASLHQE+SD
Sbjct: 237  LLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSD 296

Query: 2163 TSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGK 1984
            +S P KSLN WIDLQ+EVAQYINSDVRG+P   Q  RPLSGF QRLKGKQGRFRGNLSGK
Sbjct: 297  SS-PVKSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFTQRLKGKQGRFRGNLSGK 355

Query: 1983 RVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 1804
            RVEYTGRTVISPDPNLKITEVA+PIL+A+ILTYPERVS HNIEKLRQCVRNGPNKYPGAK
Sbjct: 356  RVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAK 415

Query: 1803 FIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARI 1624
            FI+ P  + +SL+ ++RKRYADELKFG IVDRHLEDGD +LFNRQPSLHRMSIM HRARI
Sbjct: 416  FIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 475

Query: 1623 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVA 1444
            MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPK+GEILVA
Sbjct: 476  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVA 535

Query: 1443 STQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNV 1264
            STQDFLTSSFLITRKDTFY+RASFSLICSYMGD MDP DLP+PA +KPVELWTGKQLF+V
Sbjct: 536  STQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHV 595

Query: 1263 LLRPHAKMRVYLNLTVAEKNYGKPARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDG 1084
            LLRP++KMRVY+NLT+ EK+Y     ETMC +DGFVYFRNSELISGQLGKATLGNGNKDG
Sbjct: 596  LLRPYSKMRVYVNLTLTEKSYSGKG-ETMCSSDGFVYFRNSELISGQLGKATLGNGNKDG 654

Query: 1083 LYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYG 904
            LYSVLLRDY SHAAATCMNRLAKLSARWIGNHGFSIGIDDV P + L+ +K+ EI   Y 
Sbjct: 655  LYSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYK 714

Query: 903  KCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQ 724
            KC+D I ++N+GKL +QPG DA  TLEA++T  LN +R +  K+CM  L WRNSPLIMSQ
Sbjct: 715  KCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQ 774

Query: 723  CGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGL 544
            CGSKGSPINISQM+ACVGQQSVGGRRAP+GF+DRSLPHFP KSK P AKGFVA+SF+ GL
Sbjct: 775  CGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGL 834

Query: 543  TATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVY 364
            +ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL++ YD TVRNASA I+QF+Y
Sbjct: 835  SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMY 894

Query: 363  GDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPE 184
            GDD MDP++MEEK G+PLNF R+ MKVKATCP G E SLS SEIC+  +ERLS HDMTPE
Sbjct: 895  GDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPE 954

Query: 183  GGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQL 4
            GGCSEAFR SLS FL +    +L+N  ++L +  ++  G+DR  LEK   NISGIT +QL
Sbjct: 955  GGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISGITKKQL 1014

Query: 3    E 1
            +
Sbjct: 1015 Q 1015


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score = 1475 bits (3818), Expect = 0.0
 Identities = 736/1017 (72%), Positives = 843/1017 (82%), Gaps = 1/1017 (0%)
 Frame = -3

Query: 3048 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 2869
            QFTK+PYIEDVGPR+IESI F+   ESEI KAAEV+V+RGVYYD ++KPIE+GLLDP MG
Sbjct: 6    QFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRMG 65

Query: 2868 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 2689
            P  K G C TC G F  CPGH GYLTL LPVY+ GYL+ I+DILKCICK CS +LL EK 
Sbjct: 66   PANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEKA 125

Query: 2688 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 2509
               +L++MR+ K E L K +L KK+V+KC  + AS +KA  CSRCG++NG+VKK   +LG
Sbjct: 126  SKDYLKKMRSQKMEALKKAELMKKIVQKCTAM-ASSKKAVKCSRCGYMNGIVKKAVSVLG 184

Query: 2508 IVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCELLYLS 2329
            I+H+RSK+ D S  E +SA+SHT+E  AS  +V D +NP  V SL K + DEDC+LL L+
Sbjct: 185  IIHDRSKIADGSLEECSSAISHTKESKAS-FSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243

Query: 2328 DRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSLPT 2149
            +RPEKL+                +DGGTQSNEND+TERLKRIIQANASLHQE+ DT   +
Sbjct: 244  ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303

Query: 2148 KSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 1969
            K L  W  LQ+EVAQYINSDVRG+P + QAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT
Sbjct: 304  KCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 363

Query: 1968 GRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQP 1789
            GRTVISPDPNLKITEVA+PIL+A+IL+YPERVSHHNIEKLRQC+ NGP KYPGAK I+ P
Sbjct: 364  GRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYP 423

Query: 1788 GADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRT 1609
                 SL+ + RKR+ADELK+G IV+RHLEDGD +LFNRQPSLHRMSIMCHRARIMPWRT
Sbjct: 424  DGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 483

Query: 1608 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDF 1429
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVASTQDF
Sbjct: 484  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 543

Query: 1428 LTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPH 1249
            LTSSFLITRKDTFYDRA+FSL+CSYMGDGMD +DLPTPA++KPVELWTGKQLFNVLLRPH
Sbjct: 544  LTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRPH 603

Query: 1248 AKMRVYLNLTVAEKNYGK-PARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSV 1072
            A +RVYLNLTV EK Y K   +ETMCP+DGFVYFRNSELISGQLGKATLGNGNKDGL+SV
Sbjct: 604  ANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSV 663

Query: 1071 LLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGKCDD 892
            LLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDVQP   L  +K K I  GY  C +
Sbjct: 664  LLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHE 723

Query: 891  FIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQCGSK 712
             I++YNKGKL+LQPG +A  TLEA+IT VLN IR  TA VCM  L WRNSPLIMSQCGSK
Sbjct: 724  LIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSK 783

Query: 711  GSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLTATE 532
            GSPINISQM+ACVGQQSVGGRRAP+GF+DR+LPHFP+KSK P AKGFVA+SFY+GLTATE
Sbjct: 784  GSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATE 843

Query: 531  FFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYGDDC 352
            FFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDLSIQYD TVRNA+ SI+QF+YGDD 
Sbjct: 844  FFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDG 903

Query: 351  MDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEGGCS 172
            MDPA+ME K G PLNF+R+ +KVKATCPAG+  SLS  +I ++T +RL EH+ + E GCS
Sbjct: 904  MDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQI-EETVKRLKEHNTSAE-GCS 961

Query: 171  EAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQLE 1
            +AF+ +LS FL E+C    +NT + L + G+  G E+    EKF  NISGITS+QL+
Sbjct: 962  DAFKTNLSGFL-EECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQ 1017


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score = 1471 bits (3807), Expect = 0.0
 Identities = 734/1017 (72%), Positives = 842/1017 (82%), Gaps = 1/1017 (0%)
 Frame = -3

Query: 3048 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 2869
            QFTK+PYIEDVGPR+IESI F+   ESEI KAAEV+V+RGVYYD ++KPIE+GLLDP MG
Sbjct: 6    QFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRMG 65

Query: 2868 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 2689
            P  K G C TC G F  CPGH GYLTL LPVY+ GYL+ I+DILKCICK CS +LL EK 
Sbjct: 66   PANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEKA 125

Query: 2688 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 2509
               +L++MR+ K E L K +L KK+V+KC  + AS +KA  CSRCG++NG+VKK   +LG
Sbjct: 126  SKDYLKKMRSQKMEALKKAELMKKIVQKCTAM-ASSKKAVKCSRCGYMNGIVKKAVSVLG 184

Query: 2508 IVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCELLYLS 2329
            I+H+RSK+ D S  E +SA+SHT+E  AS  +V D +NP  V SL K + DEDC+LL L+
Sbjct: 185  IIHDRSKIADGSLEECSSAISHTKESKAS-FSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243

Query: 2328 DRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSLPT 2149
            +RPEKL+                +DGGTQSNEND+TERLKRIIQANASLHQE+ DT   +
Sbjct: 244  ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303

Query: 2148 KSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 1969
            K L  W  LQ+EVAQYINSDVRG+P + QAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT
Sbjct: 304  KCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 363

Query: 1968 GRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQP 1789
            GRTVISPDPNLKITEVA+PIL+A+IL+YPERVSHHNIEKLRQC+ NGP KYPGAK I+ P
Sbjct: 364  GRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYP 423

Query: 1788 GADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRT 1609
                 SL+ + RKR+ADELK+G IV+RHLEDGD +LFNRQPSLHRMSIMCHRARIMPWRT
Sbjct: 424  DGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 483

Query: 1608 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDF 1429
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVASTQDF
Sbjct: 484  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 543

Query: 1428 LTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPH 1249
            LTSSFLITRKDTFYDRA+FSL+CSYMGDGMD +DLPTPA++K +ELWTGKQLFNVLLRPH
Sbjct: 544  LTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLRPH 603

Query: 1248 AKMRVYLNLTVAEKNYGK-PARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSV 1072
            A +RVYLNLTV EK Y K   +ETMCP+DGFVYFRNSELISGQLGKATLGNGNKDGL+SV
Sbjct: 604  ANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSV 663

Query: 1071 LLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGKCDD 892
            LLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDVQP   L  +K K I  GY  C +
Sbjct: 664  LLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHE 723

Query: 891  FIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQCGSK 712
             I++YNKGKL+LQPG +A  TLEA+IT VLN IR  TA VCM  L WRNSPLIMSQCGSK
Sbjct: 724  LIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSK 783

Query: 711  GSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLTATE 532
            GSPINISQM+ACVGQQSVGGRRAP+GF+DR+LPHFP+KSK P AKGFVA+SFY+GLTATE
Sbjct: 784  GSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATE 843

Query: 531  FFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYGDDC 352
            FFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDLSIQYD TVRNA+ SI+QF+YGDD 
Sbjct: 844  FFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDG 903

Query: 351  MDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEGGCS 172
            MDPA+ME K G PLNF+R+ +KVKATCPAG+  SLS  +I ++T +RL EH+ + E GCS
Sbjct: 904  MDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQI-EETVKRLKEHNTSAE-GCS 961

Query: 171  EAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQLE 1
            +AF+ +LS FL E+C    +NT + L + G+  G E+    EKF  NISGITS+QL+
Sbjct: 962  DAFKTNLSGFL-EECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQ 1017


>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
          Length = 1395

 Score = 1415 bits (3663), Expect = 0.0
 Identities = 719/1026 (70%), Positives = 814/1026 (79%), Gaps = 10/1026 (0%)
 Frame = -3

Query: 3048 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 2869
            +FTK+PYIEDVGPR+I+SI FS L +SEI KAAEV+VY+ +YYDP  +PIE GLLDP MG
Sbjct: 4    KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63

Query: 2868 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 2689
            P  K G C TCHG F+ CPGHYGYL+L LPVY+ GYL+ ILDILKCICK CS ++L EK 
Sbjct: 64   PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123

Query: 2688 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 2509
               +L++MR+PK + L K  + K +V+KC+ + +S  KA  C RCG+VNG VKK   MLG
Sbjct: 124  CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASS--KAVKCWRCGYVNGTVKKAVAMLG 181

Query: 2508 IVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCELLYLS 2329
            I+H+RSK+ND+S  E+ SA+SHT+E  AS       +NP  V SL K + D DCELLYLS
Sbjct: 182  IIHDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLS 241

Query: 2328 DRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSLPT 2149
            DRPEKL+                +DG +QSNENDITERLKRIIQANASL QE+ +T+   
Sbjct: 242  DRPEKLIITNIAVPPIPIRPSVIMDG-SQSNENDITERLKRIIQANASLRQELVETNAAF 300

Query: 2148 KSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 1969
            K L  W  LQVEVAQYINSDVRG+PFS Q ++PLSGFVQR+KGK GRFRGNLSGKRVEYT
Sbjct: 301  KCLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFRGNLSGKRVEYT 360

Query: 1968 GRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQP 1789
            GRTVISPDPNLKITEVA+PI +ARILTYPERVS+HNIEKLRQCVRNGP+KYPGA+ ++ P
Sbjct: 361  GRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVRYP 420

Query: 1788 GADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRT 1609
                  LI   RKR ADELKFG +VDRHLEDGD +LFNRQPSLHRMSIMCHRARIMPWRT
Sbjct: 421  DGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRT 480

Query: 1608 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDF 1429
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVASTQDF
Sbjct: 481  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 540

Query: 1428 LTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPH 1249
            LTSSFLITRKD FYDRA+FSLICSYMGDGMD IDLPTPAL+KP+ELWTGKQLF+VLLRPH
Sbjct: 541  LTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRPH 600

Query: 1248 AKMRVYLNLTVAEKNYGKP----------ARETMCPNDGFVYFRNSELISGQLGKATLGN 1099
            A +RVYLNL V E+NY K             ETMCP+DGFVY RNSELI GQLGKATLGN
Sbjct: 601  ASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATLGN 660

Query: 1098 GNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEI 919
            GNKDGLYSVLLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDVQP  +L  EK   I
Sbjct: 661  GNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKALTI 720

Query: 918  RSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSP 739
               Y KCD+ I+ +N+GKL+ +PG+DA  TLEA +T +LNNIR +T KVCM  L WRNSP
Sbjct: 721  SGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNSP 780

Query: 738  LIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANS 559
            LIMSQCGSKGS INISQM+ACVGQQSVGGRRAPNGF+DRSLPHF + SK P AKGFVANS
Sbjct: 781  LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANS 840

Query: 558  FYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASI 379
            FYSGLTATEFFFHTMAGREGLVDTAVKTA+TGYMSRRL+KALEDLSI YD TVRNAS  I
Sbjct: 841  FYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGCI 900

Query: 378  IQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEH 199
            +QF+YGDD MDPA ME K+G PLNFDR+LMKVKATCP  ++  L    I Q  +E+L++H
Sbjct: 901  VQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLAKH 960

Query: 198  DMTPEGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGI 19
            D  P G CSEAF+ SL  FLK +    L   M+ +     K        LEK    ISGI
Sbjct: 961  D--PAGVCSEAFKKSLKGFLKSQ-TNELDRVMKLVNNCAQKS-----EILEKVGHKISGI 1012

Query: 18   TSRQLE 1
            + RQLE
Sbjct: 1013 SDRQLE 1018


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score = 1389 bits (3596), Expect = 0.0
 Identities = 707/1025 (68%), Positives = 806/1025 (78%), Gaps = 10/1025 (0%)
 Frame = -3

Query: 3045 FTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMGP 2866
            FTKQPYIEDVGPR+IESI FS + +SEI+KAAEV+VY+G YY  ++ PIE GLLDP MGP
Sbjct: 14   FTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGLLDPRMGP 73

Query: 2865 TLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKDR 2686
              K   C TCHG FS CPGHYGYLTL LPVY+ GYL+ ILDILKCICK CS LLL EK  
Sbjct: 74   ANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYCSRLLLEEKLC 133

Query: 2685 LAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLGI 2506
              +L++MRNPK E L KT L K +V+KC+ + +   KA  C RCG++NGMVKK   +LGI
Sbjct: 134  KDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS---KAVKCPRCGYINGMVKKAVAVLGI 190

Query: 2505 VHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCELLYLSD 2326
            +H+RSKV +S   E+ SA++HT+E  A+       +NP  V  L K + D DCE+LYLS+
Sbjct: 191  IHDRSKVTESLQ-EFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSE 249

Query: 2325 RPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSLPTK 2146
            RPEKL+                +DG +QSNENDITERLKRIIQ NASL QE+ + +   K
Sbjct: 250  RPEKLIITNIAVPPIAIRPSVIMDG-SQSNENDITERLKRIIQTNASLQQELVEANSAFK 308

Query: 2145 SLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTG 1966
            SL  W  LQVEVAQYINSDVRG+PFS Q ARPLSGFVQRLKGKQGRFRGNLSGKRVEYTG
Sbjct: 309  SLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTG 368

Query: 1965 RTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQPG 1786
            RTVISPDPNLKITEVA+PI +ARILTYPERVS HNIEKLRQC++NGP+KYPGA+ I+ P 
Sbjct: 369  RTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMIRYPD 428

Query: 1785 ADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRTL 1606
                 L    R + A ELK G IVDRHLEDGD +LFNRQPSLHRMSIMCHRARIMPWRTL
Sbjct: 429  GTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTL 488

Query: 1605 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFL 1426
            RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFL
Sbjct: 489  RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDFL 548

Query: 1425 TSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPHA 1246
            TSSFLITRKDTFYDRA+FSL+C YMGDGMD +DLPTPA++KPVELWTGKQLF+VL+RPHA
Sbjct: 549  TSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLIRPHA 608

Query: 1245 KMRVYLNLTVAEKNYGKP----------ARETMCPNDGFVYFRNSELISGQLGKATLGNG 1096
             MRVY+NLTV EK Y               ETMCPNDGFVYFRNSELISGQLGKATLGNG
Sbjct: 609  NMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKATLGNG 668

Query: 1095 NKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIR 916
            NKDGLYSVLLRDYG+HA + CMNRLAKLSARWIGNHGFSIGIDDVQP  +L  +K K I 
Sbjct: 669  NKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKGKLIS 728

Query: 915  SGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPL 736
              Y  C+  I+EYN+GKL+L+PG DA  TLEA IT +LN IR +  K CMG+L WRNSPL
Sbjct: 729  ENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWRNSPL 788

Query: 735  IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSF 556
            IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGF+DRSLPHFP+K+K P AKGFVANSF
Sbjct: 789  IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFVANSF 848

Query: 555  YSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASII 376
            YSGL+ATEFFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLSIQYD +VRNA   I+
Sbjct: 849  YSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAGGCIV 908

Query: 375  QFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHD 196
            QF+YGDD MDPA ME K+G+PLNFDR+LMKVKATCP   +  LSP ++ +  +++L+ + 
Sbjct: 909  QFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQLAAYG 968

Query: 195  MTPEGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGIT 16
               +  CSEAF +SL KF +           + ++   D    +  + LE+     SGIT
Sbjct: 969  ---KESCSEAFLNSLRKFFE----GQQDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGIT 1021

Query: 15   SRQLE 1
             +QLE
Sbjct: 1022 EKQLE 1026


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score = 1368 bits (3542), Expect = 0.0
 Identities = 697/1039 (67%), Positives = 804/1039 (77%), Gaps = 14/1039 (1%)
 Frame = -3

Query: 3075 MRRGAQATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIE 2896
            M R       FTKQPYIEDVGPR+I+S+ F+T   +EI K AEV+VY+G+YYD ++KPI+
Sbjct: 1    MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPID 60

Query: 2895 HGLLDPHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQC 2716
             GLLDP MGP  KG  C TCH  F  CPGHYGY+ L LPV++ GY T IL+ILKCICK C
Sbjct: 61   GGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSC 120

Query: 2715 SSLLLGEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGM 2536
            S +LL EK    FL++MRNPK E L K  L KK+++KC+ L  +G K+T CSRCG++NG 
Sbjct: 121  SRILLEEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLT-TGNKSTRCSRCGYLNGS 179

Query: 2535 VKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKD 2356
            VKK   MLGI+H R++  D+       +      YN S     D +NP  V  L + + D
Sbjct: 180  VKKAVSMLGILHYRARSKDAG----VVSEDLRAPYNVSN----DILNPFRVLCLFQRMSD 231

Query: 2355 EDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQ 2176
            EDCELL+LS+RPEKL+                +DG +QSNENDITERLKRIIQ NAS+ Q
Sbjct: 232  EDCELLFLSNRPEKLIITNVLVPPIAIRPSVIMDG-SQSNENDITERLKRIIQQNASVSQ 290

Query: 2175 EISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGN 1996
            E+S ++   K L +W  LQ EVAQ INSDVRGIPFS Q ++PL+GFVQRLKGKQGRFRGN
Sbjct: 291  ELSTSNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGN 350

Query: 1995 LSGKRVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKY 1816
            L GKRVE+TGRTVISPDPNLKITEVAVPI +ARILTYPERV+ HNIEKLRQCV NGP+KY
Sbjct: 351  LCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKY 410

Query: 1815 PGAKFIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCH 1636
            PGA+ ++       SL+ + RKR ADELK+G+IV+RHLEDGD +LFNRQPSLHRMSIMCH
Sbjct: 411  PGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCH 470

Query: 1635 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGE 1456
            R R+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+LLMGVQNNLCTPKNGE
Sbjct: 471  RVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGE 530

Query: 1455 ILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQ 1276
            ILVASTQDFLTSSFLITRKDTFYDRA+FSL+CSYMGDGMD +DLPTPALVKP+ELWTGKQ
Sbjct: 531  ILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQ 590

Query: 1275 LFNVLLRPHAKMRVYLNLTVAEKNYGK-----PARETMCPNDGFVYFRNSELISGQLGKA 1111
            LF+VL+RPHA M+VYLNLTV EK+Y K       RETMCPNDGFVYFRNSELISGQ+GKA
Sbjct: 591  LFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKA 650

Query: 1110 TLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEK 931
            TLGNGNKDGLYSVLLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDVQP D+L+ +K
Sbjct: 651  TLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKK 710

Query: 930  EKEIRSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQW 751
            +  I  GY  CD  I  +N G L  + G DA  +LE+KITQ+LN IR  TA VCM NL W
Sbjct: 711  QTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHW 770

Query: 750  RNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGF 571
            RNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAP+GF+DRSLPHF +K+K P AKGF
Sbjct: 771  RNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGF 830

Query: 570  VANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNA 391
            VANSFYSGLTATEFFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLSI YD +VRNA
Sbjct: 831  VANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNA 890

Query: 390  SASIIQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDER 211
               I+QF YGDD MDPAQME K+G PLNF+R+ +K KATCP+     LSPSE  +  ++R
Sbjct: 891  GGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDR 950

Query: 210  LSEHDMTPEGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQ------GGEDRRSL 49
            LS+ D +PE GCS AF  SL  FL  K V + + +   L  D +           D  ++
Sbjct: 951  LSKDDASPECGCSPAFVGSLKIFL-NKYVEAQKKSWGTLLADNESAVDKSIISSSDNDNI 1009

Query: 48   ---EKFYPNISGITSRQLE 1
                K   NI+G+T RQL+
Sbjct: 1010 VIRNKVVQNIAGVTHRQLQ 1028


>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
          Length = 1368

 Score = 1333 bits (3451), Expect = 0.0
 Identities = 677/1021 (66%), Positives = 795/1021 (77%), Gaps = 5/1021 (0%)
 Frame = -3

Query: 3048 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 2869
            Q TKQPYIEDVG RRIESI FSTL  SE+LK A VEVY+G YYD +KKP+ +GLLD  MG
Sbjct: 2    QSTKQPYIEDVGSRRIESINFSTLSGSEVLKTAVVEVYKGSYYDANKKPVSNGLLDMRMG 61

Query: 2868 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 2689
            P  K  VC TCHG F +CPGHYGYL L LPVY+ GYL+NI+DILKCICK CS +LL EK+
Sbjct: 62   PPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRVLLEEKE 121

Query: 2688 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 2509
               FL++MRNP+ EPL KT L KK+V++CN    S + A  C RCG +NGMVK+      
Sbjct: 122  HHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSNKLAK-CPRCGHINGMVKRAPYK-- 178

Query: 2508 IVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCELLYLS 2329
            ++++R +V DS   E  SA        AS       ++   V+ LL+N+ DEDCELLY+ 
Sbjct: 179  VMYDRGRVIDSQMEECQSA---GPSMKASRGNTTSTLDALFVFRLLRNMLDEDCELLYIH 235

Query: 2328 DRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSLPT 2149
            DRPEKLM                VDGGTQSNENDITERLK II+ANA+L Q++ +T++  
Sbjct: 236  DRPEKLMVTNILVPPTAIRPSVFVDGGTQSNENDITERLKYIIEANANLSQQLLETNIYK 295

Query: 2148 KSLNAWIDLQVEVAQYINSDVRGIP-FSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 1972
            K + +W  LQ+EVAQYINSD RG+P +   +++PLSGFVQRLKGKQGRFRGNLSGKRVEY
Sbjct: 296  KGVTSWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSGKRVEY 355

Query: 1971 TGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQ 1792
            TGRTVISPDPNLKITEVAVPIL+A+ILTYPERVSH NI +LR+CVR GPN+YPGAKFI+Q
Sbjct: 356  TGRTVISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGAKFIRQ 415

Query: 1791 PGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWR 1612
            P    ISL  ++RK +AD LK+GDIVDRHL+DGD +LFNRQPSLHRMSIMCHRARIMPWR
Sbjct: 416  PDGTEISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRARIMPWR 475

Query: 1611 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQD 1432
            TLRFNESVCNPYNADFDGDEMNMHVPQTEE+R EA++LMGVQNNLCTPKNGE+LVASTQD
Sbjct: 476  TLRFNESVCNPYNADFDGDEMNMHVPQTEESRAEAIMLMGVQNNLCTPKNGEVLVASTQD 535

Query: 1431 FLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRP 1252
            FLTSSFLITRKDTFYDR++FSLIC+++ DG+  +DLP PA+VKPVELWTGKQ+F+VLLRP
Sbjct: 536  FLTSSFLITRKDTFYDRSAFSLICAFVSDGLGTVDLPMPAVVKPVELWTGKQIFSVLLRP 595

Query: 1251 HAKMRVYLNLTVAEKNYGKPARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSV 1072
                +V++NLTVAEK Y K + ETMCP DGFV  RNSELISGQLGKATLGNG+KDGLYS+
Sbjct: 596  DKDRKVFVNLTVAEKIYVK-SGETMCPRDGFVCIRNSELISGQLGKATLGNGSKDGLYSI 654

Query: 1071 LLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGKCDD 892
            LLRDYG+HAAA CMNRLAKLSARWIGNHGFSIGI+DVQP D L  EK+  I   YG+C  
Sbjct: 655  LLRDYGAHAAADCMNRLAKLSARWIGNHGFSIGINDVQPGDILNTEKKTVIDDEYGQCIR 714

Query: 891  FIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQCGSK 712
            +IE Y  GKLEL PG +   TLEAKIT  LN IR  TA+VCM NL WRNSPLIMSQCGSK
Sbjct: 715  YIESYKSGKLELLPGCNKAETLEAKITGTLNKIRDTTAEVCMTNLSWRNSPLIMSQCGSK 774

Query: 711  GSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLTATE 532
            GSPINI QMVACVGQQSVGGRRAPNGF+DR+LPHF + +K P AKGFV NSFY+GL  TE
Sbjct: 775  GSPINICQMVACVGQQSVGGRRAPNGFLDRTLPHFERGAKDPDAKGFVQNSFYTGLLPTE 834

Query: 531  FFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYGDDC 352
            FFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLS+QYD TVRNAS  I+QF YGDD 
Sbjct: 835  FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSVQYDSTVRNASGCIVQFTYGDDG 894

Query: 351  MDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSE----ICQKTDERLSEHDMTPE 184
            +DPAQMEEKTG PLNF+R+ MK KATCP+  + SL   +    I +  +E  S  D++  
Sbjct: 895  LDPAQMEEKTGFPLNFERLFMKAKATCPSEGQPSLKAEDIDFIINRVIEENHSRSDISEM 954

Query: 183  GGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQL 4
              CSE F  SL +FL ++   +    M + +++ +    +D+  ++    + SGIT +QL
Sbjct: 955  EKCSETFEASLLRFLNKRVYPT---GMLSEKLNSENISLQDKSYVQSVVSSTSGITQQQL 1011

Query: 3    E 1
            E
Sbjct: 1012 E 1012


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score = 1329 bits (3439), Expect = 0.0
 Identities = 689/1040 (66%), Positives = 786/1040 (75%), Gaps = 25/1040 (2%)
 Frame = -3

Query: 3045 FTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHM-- 2872
            FTKQPYIEDVGPR+IESI FS + +SEI+KAAEV+VY+G YY  ++ PIE GLLDP M  
Sbjct: 14   FTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGLLDPRMEK 73

Query: 2871 -------------GPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKC 2731
                         GP  K   C TCHG FS CPGHYGYLTL LPVY+ GYL+ ILDILKC
Sbjct: 74   IIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKC 133

Query: 2730 ICKQCSSLLLGEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCG 2551
            ICK CS LLL EK    +L++MRNPK E L KT L K +V+KC+ + +   KA  C RCG
Sbjct: 134  ICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS---KAVKCPRCG 190

Query: 2550 FVNGMVKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLL 2371
            ++NGMVKK   +LGI+H+RSKV +S   E+ SA++HT+E  A+       +NP  V  L 
Sbjct: 191  YINGMVKKAVAVLGIIHDRSKVTESLQ-EFASAITHTKESKAAVNVATYILNPVNVLFLF 249

Query: 2370 KNVKDEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQAN 2191
            K + D DCE+LYLS+RPEKL+                +DG +QSNENDITERLKRIIQ N
Sbjct: 250  KRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDG-SQSNENDITERLKRIIQTN 308

Query: 2190 ASLHQEISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQG 2011
            ASL QE+ + +   KSL  W  LQVEVAQYINSDVRG+PFS Q ARPLSGFVQRLKGKQG
Sbjct: 309  ASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQG 368

Query: 2010 RFRGNLSGKRVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRN 1831
            RFRGNLSGKRVEYTGRTVISPDPNLKITEVA+PI +ARILTYPERVS HNIEKLRQC++N
Sbjct: 369  RFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQN 428

Query: 1830 GPNKYPGAKFIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRM 1651
            GP+KYPGA+ I+ P      L    R + A ELK G IVDRHLEDGD +LFNRQPSLHRM
Sbjct: 429  GPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRM 488

Query: 1650 SIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCT 1471
            SIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCT
Sbjct: 489  SIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCT 548

Query: 1470 PKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVEL 1291
            PKNGEILVASTQDFLTSSFLITRKDTFYDRA+FSL+C YMGDGMD +DLPTPA++KPVEL
Sbjct: 549  PKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVEL 608

Query: 1290 WTGKQLFNVLLRPHAKMRVYLNLTVAEKNYGKP----------ARETMCPNDGFVYFRNS 1141
            WTGKQLF+VL+RPHA MRVY+NLTV EK Y               ETMCPNDGFVYFRNS
Sbjct: 609  WTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNS 668

Query: 1140 ELISGQLGKATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDV 961
            ELISGQLGKATLG                      CMNRLAKLSARWIGNHGFSIGIDDV
Sbjct: 669  ELISGQLGKATLG----------------------CMNRLAKLSARWIGNHGFSIGIDDV 706

Query: 960  QPPDKLIIEKEKEIRSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGET 781
            QP  +L  +K K I   Y  C+  I+EYN+GKL+L+PG DA  TLEA IT +LN IR + 
Sbjct: 707  QPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDA 766

Query: 780  AKVCMGNLQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPK 601
             K CMG+L WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGF+DRSLPHFP+
Sbjct: 767  GKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPR 826

Query: 600  KSKIPQAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLS 421
            K+K P AKGFVANSFYSGL+ATEFFFHTM GREGLVDTAVKTADTGYMSRRL+KALEDLS
Sbjct: 827  KAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLS 886

Query: 420  IQYDYTVRNASASIIQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSP 241
            IQYD +VRNA   I+QF+YGDD MDPA ME K+G+PLNFDR+LMKVKATCP   +  LSP
Sbjct: 887  IQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSP 946

Query: 240  SEICQKTDERLSEHDMTPEGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGED 61
             ++ +  +++L+ +    +  CSEAF +SL KF +           + ++   D    + 
Sbjct: 947  QQVSEIVEKQLAAYG---KESCSEAFLNSLRKFFE----GQQDKLDKKIKFVEDIGWDDK 999

Query: 60   RRSLEKFYPNISGITSRQLE 1
             + LE+     SGIT +QLE
Sbjct: 1000 SQILEEVTHKTSGITEKQLE 1019


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score = 1324 bits (3426), Expect = 0.0
 Identities = 678/1030 (65%), Positives = 791/1030 (76%), Gaps = 15/1030 (1%)
 Frame = -3

Query: 3045 FTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMGP 2866
            +TKQPYIEDVGPRRI+SI FST+  S+ILKA+E +V+ G YYD +KK I  GLLD  MG 
Sbjct: 10   YTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGLLDTRMGA 69

Query: 2865 TLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKDR 2686
              K G C+TC G+F+ CPGH+GYL L LPVY+ GYL+ ILDILKCICK CS +L+ EK R
Sbjct: 70   PNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVDEKLR 129

Query: 2685 LAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLGI 2506
             ++L++MRNP+ EPL K +L K++V+KC+ + +S  KA  C RCG++NGMVKK   ++GI
Sbjct: 130  KSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASS--KAVKCLRCGYMNGMVKKAGSVVGI 187

Query: 2505 VHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCELLYLSD 2326
            +H+RSK+ D    E  SA+ HT+E  A        +NP  V SL + + +EDCELLYL  
Sbjct: 188  IHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYLQG 247

Query: 2325 RPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISD-TSLPT 2149
            RPEKL+                 +G +QSNENDITERLK+IIQ NA L  E+ +      
Sbjct: 248  RPEKLIITTIAVPPISIRPSVFTEG-SQSNENDITERLKQIIQFNAKLRLELLEGRRTGI 306

Query: 2148 KSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 1969
            K L  W +LQ  V  YINSDVR IP   Q  RPLSGFVQRL GKQGRFR NL+GKRVE+T
Sbjct: 307  KYLIGWDELQAVVTLYINSDVR-IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEFT 365

Query: 1968 GRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQP 1789
            GRTVISPDPNLKITEVA+PI +ARILTYPERV+HHNIEKLRQCV NG  KYPGA+ +  P
Sbjct: 366  GRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTYP 425

Query: 1788 GADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRT 1609
                  L    RKR A+ELK G IV RHLEDGD +LFNRQPSLHRMSIMCHRARIMPWRT
Sbjct: 426  DGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 485

Query: 1608 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQDF 1429
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA LLMGVQNNLCTPKNGEILVASTQDF
Sbjct: 486  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVASTQDF 545

Query: 1428 LTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPH 1249
            LTSSFLITRKDTFYDRA+FSL+CSYM DGMD +DLPTP+++KP+ELWTGKQLF+VLLRPH
Sbjct: 546  LTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVLLRPH 605

Query: 1248 AKMRVYLNLTVAEKNYGKP------ARETMCPNDGFVYFRNSELISGQLGKATLGNGNKD 1087
            A +RVY+NL + EKNY +P       RETMCPNDG+VYFRNSELISGQLGKATLGNGNKD
Sbjct: 606  ANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLGNGNKD 665

Query: 1086 GLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGY 907
            GLYS+LLRDY ++AAATCMNRLAKLSARWIGNHGFSIGIDDVQP  KLI EK K I +GY
Sbjct: 666  GLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKTISNGY 725

Query: 906  GKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMS 727
              C+  I +YN G+L L+ G DA  TLE +IT+ LN +R E   VCM  L WRNSPLIMS
Sbjct: 726  RHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHWRNSPLIMS 785

Query: 726  QCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSG 547
            QCGSKGSPINISQM+ACVGQQSVGG RAP+GF+DRSLPHFP+KSK P AKGFVANSFYSG
Sbjct: 786  QCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSG 845

Query: 546  LTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFV 367
            L+ATEFFFHTM GREGLVDTAVKTADTGYM+RRL K LEDL +QYD TV++A   I+QF+
Sbjct: 846  LSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGIVQFL 905

Query: 366  YGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTP 187
            YGDD +DPA ME K G PLNFDR+ MKVKATC A ++  LSPS+I       L +H+ T 
Sbjct: 906  YGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIVQSLLLKHNGTL 965

Query: 186  EGGCSEAFRDSLSKFLKE-----KCVASLRN--TMQNLEMDGDKQGGED-RRSLEKFYPN 31
            +G CSE+FR SLS FL +     +C+  L +   ++N E   + +G     ++ EK    
Sbjct: 966  DGICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFENIKNVEGLTGISKNTEKIAQK 1025

Query: 30   ISGITSRQLE 1
            +SGIT +QLE
Sbjct: 1026 VSGITEKQLE 1035


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score = 1318 bits (3410), Expect = 0.0
 Identities = 673/1042 (64%), Positives = 793/1042 (76%), Gaps = 17/1042 (1%)
 Frame = -3

Query: 3075 MRRGAQATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIE 2896
            M R       FTK+P++ED GPR+I+++ FSTL ESEI K AEV+V++G YYD  KKPI 
Sbjct: 1    MNRARTEGITFTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIH 60

Query: 2895 HGLLDPHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQC 2716
             GLLDP MGP  K  VC TC G F  CPGHYGYL L LPV++ GYL+ I++ILKCICK C
Sbjct: 61   GGLLDPRMGPANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGC 120

Query: 2715 SSLLLGEKDRLAFLQQMRNPKREPLMKTQLQK-KVVEKCNRLVASGRKATVCSRCGFVNG 2539
            + +LL E  R   L++MR+ K+  L K    K +V++ C+++V        C RCG++NG
Sbjct: 121  ARILLDEDTRKKHLKKMRSSKKSELDKIDFVKVRVIKDCSKVVN-------CPRCGYING 173

Query: 2538 MVKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVK 2359
             VKK    L I+H+ SK  +    E  SA+S  ++  A+       +NP  V SL K + 
Sbjct: 174  SVKKLPASLTIIHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRML 233

Query: 2358 DEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLH 2179
            DEDCELLY+++RPEKL+                +D    SNENDITERLK IIQANA L 
Sbjct: 234  DEDCELLYVAERPEKLIMTNVVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLR 292

Query: 2178 QEISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRG 1999
            QE+ +++  +K L+ W  LQ EVAQ+INSDVRGIPF  Q  + L+GFVQRLKGK GRFRG
Sbjct: 293  QELQESTFSSKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGKHGRFRG 352

Query: 1998 NLSGKRVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNK 1819
            NLSGKRVEYTGRTVISPDPNLKI+EVA+PI +ARILTYPERV+HHNIEKLRQCVRNGP+K
Sbjct: 353  NLSGKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDK 412

Query: 1818 YPGAKFIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMC 1639
            YPGA+ +++ G    SL    RKR ADEL+ GDIVDRHLEDGD +LFNRQPSLHRMSIMC
Sbjct: 413  YPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMC 472

Query: 1638 HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNG 1459
            HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+LLMGV+NNLCTPKNG
Sbjct: 473  HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNG 532

Query: 1458 EILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGK 1279
            EILVASTQDFLTSSFLITRKDTFYDR++FSLICSY+GDGMDPIDLPTPA+VKPVELW+GK
Sbjct: 533  EILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGK 592

Query: 1278 QLFNVLLRPHAKMRVYLNLTVAEKNYGKPAR--------ETMCPNDGFVYFRNSELISGQ 1123
            QLF+++LRPHA MRVY+NLTV E+NY +  +        +T+CPNDGFVYFRNSELISGQ
Sbjct: 593  QLFSIILRPHANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQ 652

Query: 1122 LGKATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKL 943
            +GK TLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP + L
Sbjct: 653  VGKVTLGNGNKDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEIL 712

Query: 942  IIEKEKEIRSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMG 763
            I +K++ I  GY +CD  IE +NKGKLEL  G DA  TLE +IT VLN +R    KVCM 
Sbjct: 713  INKKDETISEGYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQ 772

Query: 762  NLQWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQ 583
             L WRNSPLIMSQCGSKGS INISQMVACVGQQSVGGRR PNGF+DRSLPHFP+KSK P 
Sbjct: 773  TLHWRNSPLIMSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPA 832

Query: 582  AKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYT 403
            AKGFVANSFYSGL+ATEFFFHTM GREGLVDTAVKTADTGYMSR+LMK+LEDL + YDYT
Sbjct: 833  AKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYT 892

Query: 402  VRNASASIIQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAG-DEISLSPSEICQ 226
            VRNA  SI+QF YGDD MDPA ME K G+PLNF+R+ +K KA CP   D+  LS S++ +
Sbjct: 893  VRNAGGSIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSK 952

Query: 225  KTDERLSEHDMTP-------EGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGG 67
               E+LSE DM+        E G S  F +SL  F+K+           N ++  +    
Sbjct: 953  VVHEKLSEFDMSRLAEKGVFEVGFSADFVESLQSFIKD-----------NAKLTEEGFTD 1001

Query: 66   EDRRSLEKFYPNISGITSRQLE 1
            E  ++L+KF   ISGIT +QL+
Sbjct: 1002 EHSQNLKKFGQRISGITRKQLD 1023


>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Cicer arietinum]
          Length = 1399

 Score = 1315 bits (3404), Expect = 0.0
 Identities = 671/1048 (64%), Positives = 793/1048 (75%), Gaps = 23/1048 (2%)
 Frame = -3

Query: 3075 MRRGAQATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIE 2896
            M R       FTK+P+IED+GPR+I  I +STL E+EI K  EV+V++G YYD  +KP  
Sbjct: 1    MNRSRTEGLVFTKEPFIEDLGPRKIAGITYSTLSEAEISKIGEVQVWKGTYYDAFRKPEA 60

Query: 2895 HGLLDPHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQC 2716
             GLLD  MGP  K  VC TCHG F+ C GHYGYL L  PV++ GYL  ++ ILKCICK C
Sbjct: 61   DGLLDSRMGPANKSLVCATCHGNFADCQGHYGYLPLVQPVFNVGYLNTMVKILKCICKGC 120

Query: 2715 SSLLLGEKDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGM 2536
            + +LL E  R  +L++MRN K + L K QL + ++++         K   C RCG++NG+
Sbjct: 121  AGILLDEDTRKKYLKKMRNSKLDELQKIQLLESIMKRFR-----SAKFIKCQRCGYINGI 175

Query: 2535 VKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKD 2356
            VK     L IVH+ S   +   +E  SA+SH +EY A+       ++PK V+SL   + D
Sbjct: 176  VKLTRSTLRIVHDCSHGKNDVVSELQSALSHMKEYRATNDLASRNLDPKSVHSLFTKMSD 235

Query: 2355 EDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQ 2176
            EDC LLYL++RPEKL+                +DG +QSNENDITE+L++IIQANA+LH+
Sbjct: 236  EDCALLYLAERPEKLIITNIAVPPIVIRPSVIMDG-SQSNENDITEKLRKIIQANAALHK 294

Query: 2175 EISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGN 1996
            E+ ++   TK    +  LQ  VAQYINSDV+G P+S QA++PL+GFVQR+KGKQGRFR N
Sbjct: 295  ELEES---TKFQGGFEMLQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKGKQGRFRSN 351

Query: 1995 LSGKRVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKY 1816
            LSGKRVEYTGRTVISPDPNLKITEVA+PI +ARILTYPERV+HHNIEKLRQC+RNGP+KY
Sbjct: 352  LSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKY 411

Query: 1815 PGAKFIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCH 1636
            PGAK ++  G    +L  + RKR ADEL+FGDIVDRHLEDGD +LFNRQPSLHRMS+MCH
Sbjct: 412  PGAKLLRHAGGTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCH 471

Query: 1635 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGE 1456
            RARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALLLM VQNNLCTPKNGE
Sbjct: 472  RARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGE 531

Query: 1455 ILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQ 1276
            ILVASTQDFLTSSFLITRKDTFYDR++FSLICSYMGDGMDPIDLPTPA++KPVELW+GKQ
Sbjct: 532  ILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQ 591

Query: 1275 LFNVLLRPHAKMRVYLNLTVAEKNYG------KPARETMCPNDGFVYFRNSELISGQLGK 1114
            LF++LLRPHA +RVY+NLTV EK +       K   +TMCPNDGFVYFRNSELISGQLGK
Sbjct: 592  LFSILLRPHANVRVYVNLTVKEKTHNAKLDDRKREMKTMCPNDGFVYFRNSELISGQLGK 651

Query: 1113 ATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIE 934
             TLGNGNKDGL+SVLLRDY +HAAA+CMNRLAK SARWIGNHGFSIGIDDVQP + LI  
Sbjct: 652  VTLGNGNKDGLFSVLLRDYKAHAAASCMNRLAKFSARWIGNHGFSIGIDDVQPKEILIHR 711

Query: 933  KEKEIRSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQ 754
            K++ I +GY +CD FIE +NKGKLEL PG DA  TLEAKI Q LN++R  TAKVCM  L 
Sbjct: 712  KKETITTGYSECDGFIEAFNKGKLELAPGCDAAQTLEAKIFQKLNSLRDTTAKVCMQTLH 771

Query: 753  WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKG 574
            WRNSPLIMSQCGSKGSPINI QMVACVGQQSVGG RA NGFVDRSLPHF KK+K P  KG
Sbjct: 772  WRNSPLIMSQCGSKGSPINICQMVACVGQQSVGGCRAANGFVDRSLPHFTKKAKTPADKG 831

Query: 573  FVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRN 394
            FVANSF++GL+ATEFFFHTM GREGLVDTAVKTADTGYMSRRLMKALEDL + YDYTVR+
Sbjct: 832  FVANSFFTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFLHYDYTVRD 891

Query: 393  ASASIIQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCPA-GDEISLSPSEICQKTD 217
             +  I+QF YGDD MDP+ ME K G+PLNFDR+ +K KA CP+ GD+I LS S++C+   
Sbjct: 892  TNGGIVQFCYGDDGMDPSGMEGKNGKPLNFDRLFLKSKAICPSDGDDIILSSSDVCEVIR 951

Query: 216  ERL-------------SEHDMTPEGGCSEAFRDSLSKFLKEK---CVASLRNTMQNLEMD 85
            ++L             SE+D+    G S+ F  SL  F+K+      A   N  +NL   
Sbjct: 952  KKLSEVGMSKLVEKDASENDIMSVVGFSDDFIKSLQAFVKDNTKLTEAIAENDSKNL--- 1008

Query: 84   GDKQGGEDRRSLEKFYPNISGITSRQLE 1
                      +L+ F P ISGI+ RQLE
Sbjct: 1009 ---------TNLKNFIPRISGISRRQLE 1027


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score = 1299 bits (3361), Expect = 0.0
 Identities = 651/1018 (63%), Positives = 784/1018 (77%), Gaps = 2/1018 (0%)
 Frame = -3

Query: 3051 FQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSK-KPIEHGLLDPH 2875
            F FTK+P++ED+GPR+I+S+ F  L   EI+KAAE +VY+  YY+ +  KP EHG+LD  
Sbjct: 8    FNFTKKPFVEDIGPRKIKSVQFCMLSGPEIVKAAETQVYKRDYYNRTDLKPAEHGVLDTR 67

Query: 2874 MGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGE 2695
            MG + K G C TC G F  CPGH+GYL L LPV+H GY    + +L+CICK C+ +LL E
Sbjct: 68   MGFSTKSGSCATCFGDFQTCPGHFGYLKLALPVFHVGYFRTTIIVLQCICKSCARILLFE 127

Query: 2694 KDRLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKM 2515
            ++R  FL+++RNP+ E   K    KKV++KC R+        +C RCG  NG+VKK    
Sbjct: 128  EERKQFLKKIRNPRAELHQKNDFVKKVIDKCKRV-------RICPRCGDYNGVVKKAGPT 180

Query: 2514 LGIVHERSKVN-DSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCELL 2338
              I H+RSK N D  + E  +A+S T+ Y+ S   + + + P+   +L + + DEDC+LL
Sbjct: 181  FRISHDRSKANYDKLTKECKTAISQTK-YSNSDFNMVENLTPQRALALFERMVDEDCDLL 239

Query: 2337 YLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTS 2158
            YL DRPEKL+                   G++ NEN++T +L  I+Q N +L   ++  +
Sbjct: 240  YLYDRPEKLIITHIAVPPAGIRPTY--QSGSRLNENELTTKLWEIVQINHTLIDHVNKGN 297

Query: 2157 LPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRV 1978
            LP   ++ W+ LQV VA YINS++  +P + Q ++   G VQRLKGKQGRFR NL GKRV
Sbjct: 298  LPQYYMDTWVLLQVRVALYINSELPSLPLNYQPSKFEGGLVQRLKGKQGRFRSNLEGKRV 357

Query: 1977 EYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFI 1798
            ++TGRTVISPDPNLKITEVA+P L+A+ILTY ERV+ HNIEKLRQCVRNGP KYPGA F+
Sbjct: 358  DFTGRTVISPDPNLKITEVAIPRLMAQILTYKERVTIHNIEKLRQCVRNGPVKYPGANFV 417

Query: 1797 KQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMP 1618
               G D +SL    +KR ADELKFGD V+RHLEDG+ +LFNRQPSLHRMSIMCHRAR+MP
Sbjct: 418  IS-GGDTLSLRYGNKKRKADELKFGDFVERHLEDGEIVLFNRQPSLHRMSIMCHRARVMP 476

Query: 1617 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAST 1438
            WRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMGVQ+NLCTPKNGEILVAST
Sbjct: 477  WRTLRFNESVCNPYNADFDGDEMNIHVPQTEEARTEALMLMGVQHNLCTPKNGEILVAST 536

Query: 1437 QDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLL 1258
            QDFLTSS+LITRKDTFYDRA+FSL+CSYMGDGM+ IDLPTPAL+KPVELWTGKQLF+VL+
Sbjct: 537  QDFLTSSYLITRKDTFYDRATFSLMCSYMGDGMENIDLPTPALLKPVELWTGKQLFSVLI 596

Query: 1257 RPHAKMRVYLNLTVAEKNYGKPARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLY 1078
            RPHA M+VY+NL++ EKNY K   ETMC NDGFVY RNSELISGQLGKATLGNGNKDGL+
Sbjct: 597  RPHAHMKVYVNLSLMEKNYSKGG-ETMCANDGFVYIRNSELISGQLGKATLGNGNKDGLF 655

Query: 1077 SVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGKC 898
            SVLLRDY SHAAA+CMNRLAKLSARWIGNHGFSIGIDDV P   L  +KE++I+ GY  C
Sbjct: 656  SVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIKGGYSNC 715

Query: 897  DDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQCG 718
            D FI+ Y+KGKL L+PG +A  TLEA+IT+VLN IR   AKVCM  L WRNSPLIMSQCG
Sbjct: 716  DAFIDAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQCG 775

Query: 717  SKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLTA 538
            SKGSPINISQM+ACVGQQSVGGRRAPNGF+DRSLPHFP+  K P AKGFVANSFY+GLTA
Sbjct: 776  SKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGLTA 835

Query: 537  TEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYGD 358
             EFFFHTM GREGLVDTAVKTADTGY+SRRL+K+LEDLS  YD TVRN+S +IIQF YGD
Sbjct: 836  AEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSYGD 895

Query: 357  DCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEGG 178
            D MDPA+ME K+G PLN DR+ MK+KATCPA    SLSPSEI    ++RLS+HDMTPE G
Sbjct: 896  DGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERG 955

Query: 177  CSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQL 4
            CS AF++ LS F+K++ + +++ T   L +D D    E    LE    NISGI+ +QL
Sbjct: 956  CSMAFKEELSNFIKKR-MDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQL 1012


>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
            gi|557101978|gb|ESQ42341.1| hypothetical protein
            EUTSA_v10012446mg [Eutrema salsugineum]
          Length = 1375

 Score = 1290 bits (3339), Expect = 0.0
 Identities = 657/1021 (64%), Positives = 780/1021 (76%), Gaps = 5/1021 (0%)
 Frame = -3

Query: 3048 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 2869
            +FTKQPYIEDVGP +I+SI FS   + EI+KAAEV+V+R  YY+ + KP+E GLLDP MG
Sbjct: 8    EFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGLLDPRMG 67

Query: 2868 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 2689
            P  K  +C TCH  F  CPGH+GYL L LPVY+ G+L  ILDILKCICK+CS++L+ EK 
Sbjct: 68   PPNKKSICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCICKRCSNILIDEKL 127

Query: 2688 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 2509
                L++MRNPK EPL KT+L K VV+KC+ ++AS R  T C  CG++NGMVKK    +G
Sbjct: 128  YEDHLKKMRNPKMEPLKKTELAKAVVKKCS-MMASQRIIT-CKNCGYLNGMVKKVAAQMG 185

Query: 2508 IV---HERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCELL 2338
            I+   H+RSK++    +E+ SA+SHT+E   +   +   ++P +V  L K + D+DCELL
Sbjct: 186  IIGISHDRSKIHGGEVDEFKSAISHTRESTGAINPLTYVLDPNLVLGLFKGMSDKDCELL 245

Query: 2337 YLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTS 2158
            Y++ RPE L                 + GGTQSNEND+TER+K+I+Q NAS  + ++  +
Sbjct: 246  YIAHRPENLFIICMFVPPLPTRPSVRI-GGTQSNENDLTERVKKILQDNASCKKILNQAT 304

Query: 2157 LPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRV 1978
               K++  W  +Q EVAQYINS+VRGIP +   ++PLSG +QRLKGKQGRFR NLSGKRV
Sbjct: 305  TSPKNMQVWDTVQSEVAQYINSEVRGIP-NQPDSKPLSGILQRLKGKQGRFRANLSGKRV 363

Query: 1977 EYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFI 1798
            EYTGRTVISPDPNLKITEV +PIL+ARILT+PE VS HNIEKLRQCVRNGPNKYPGA+ +
Sbjct: 364  EYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARSV 423

Query: 1797 KQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMP 1618
            + P     +L+   RKR ADEL  G IVDRHLE+GD +LFNRQPSLHRMSIMCHRARIMP
Sbjct: 424  RYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMP 483

Query: 1617 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAST 1438
            WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVAST
Sbjct: 484  WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAST 543

Query: 1437 QDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLL 1258
            QDFLTSS+LITRKDTFYDRA+FSLICSYMGD MD IDLPTP ++KP+ELWTGKQ+F+VLL
Sbjct: 544  QDFLTSSYLITRKDTFYDRAAFSLICSYMGDAMDAIDLPTPTILKPIELWTGKQVFSVLL 603

Query: 1257 RPHAKMRVYLNLTVAEKNYGK-PARETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGL 1081
            RP+A +RVY+ L V EKN+ K    ETMC NDG+VYFRNSELISGQLGKATLGNGNKDGL
Sbjct: 604  RPNASVRVYVTLNVKEKNFKKGKYDETMCTNDGWVYFRNSELISGQLGKATLGNGNKDGL 663

Query: 1080 YSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGK 901
            YSVLLRDY SHAAA CMNRLAKLSARWIG HGFS+GIDDVQP ++L  E+EK I  GY  
Sbjct: 664  YSVLLRDYNSHAAAVCMNRLAKLSARWIGIHGFSLGIDDVQPGEELREEREKIINKGYED 723

Query: 900  CDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQC 721
            C   I ++N+G+L+L+ G D   +LE+ IT +LN IR  T K+CM  L WRNSPLIMSQC
Sbjct: 724  CGLKIRDFNEGRLQLKAGLDTAKSLESDITGILNRIREATGKLCMEGLHWRNSPLIMSQC 783

Query: 720  GSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLT 541
            GSKGSPINISQMVACVGQQ+V G RAP+GF+DRSLPHFP+ SK P+AKGFVANSFYSGLT
Sbjct: 784  GSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKTPEAKGFVANSFYSGLT 843

Query: 540  ATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYG 361
            ATEFFFHTM GREGLVDTAVKTA TGYMSRRLMKALEDL + YD TVRNAS  I+QF YG
Sbjct: 844  ATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYG 903

Query: 360  DDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEIS-LSPSEICQKTDERLSEHDMTPE 184
            DD MDP  ME K G PLNFDR+ +K++ATCP     S LS  E+ QK +E L  HD +  
Sbjct: 904  DDGMDPVLMEGKDGAPLNFDRLFLKIQATCPPRSHHSFLSSEELLQKFEEELVRHDTSRV 963

Query: 183  GGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDRRSLEKFYPNISGITSRQL 4
              C++AF  SL +FL    +  LR+T                 S  + +   SG+T +Q+
Sbjct: 964  --CTDAFVKSLREFLS---LLGLRST-----------------SPSQVFYKASGVTDKQI 1001

Query: 3    E 1
            E
Sbjct: 1002 E 1002


>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
          Length = 1392

 Score = 1289 bits (3336), Expect = 0.0
 Identities = 658/1039 (63%), Positives = 787/1039 (75%), Gaps = 14/1039 (1%)
 Frame = -3

Query: 3075 MRRGAQATFQFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIE 2896
            M RG      FTK+P++ED GPR+I+++ FS L +SEI K  EV+V++G YYD  KKPI 
Sbjct: 1    MNRGRTEGITFTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIH 60

Query: 2895 HGLLDPHMGPTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQC 2716
             GLLDP MGP  K   C TCHG F  CPGHYGYL L LPV++ GYL +I++ILKCICK C
Sbjct: 61   GGLLDPRMGPANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKCICKGC 120

Query: 2715 SSLLLGEKDRLAFLQQMRNPKREPLMKTQLQK-KVVEKCNRLVASGRKATVCSRCGFVNG 2539
            + +LL E  R   L++MR+ K+  L K    K ++++ C+++V        C RCG++NG
Sbjct: 121  ARILLDEDTRKKHLKKMRSSKKSELDKMDFVKVRIIKDCSKVVN-------CPRCGYING 173

Query: 2538 MVKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVK 2359
             VKK    L I+H+ SK  ++   E  S +S  ++  A+       +NP  V SL + + 
Sbjct: 174  SVKKLPASLIIMHDCSKCKNNIVEELESTLSRIKDSKATANVSNRILNPFQVLSLFRKML 233

Query: 2358 DEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLH 2179
            DEDCELLY+++RPEKL+                +D    SNENDITERLK IIQANA L 
Sbjct: 234  DEDCELLYVAERPEKLIITNIVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLR 292

Query: 2178 QEISDTSLPTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRG 1999
            QE+ ++S+ +K L+ W  LQ EVAQ+INS+VRGIPF  Q+ + L+GFVQRLKGK GRFRG
Sbjct: 293  QELQESSVSSKFLDGWEILQNEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKGKHGRFRG 352

Query: 1998 NLSGKRVEYTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNK 1819
            NLSGKRVEYTGRTVISPDPNLKI+EVA+PIL+A ILTYPERV+HHNIEKLRQCVRNGP+K
Sbjct: 353  NLSGKRVEYTGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDK 412

Query: 1818 YPGAKFIKQPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMC 1639
            YPGA+ +++ G    SL    RKR ADEL+ GDIVDRHLEDGD +LFNRQPSLHRMSIM 
Sbjct: 413  YPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMS 472

Query: 1638 HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNG 1459
            HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA+LLMGVQNNLCTPKNG
Sbjct: 473  HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNG 532

Query: 1458 EILVASTQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGK 1279
            EILVASTQDFLTSSFL+TRKDTFYDR++F+ IC+++GDG+D IDLPTPA+VKPVELW+GK
Sbjct: 533  EILVASTQDFLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGK 592

Query: 1278 QLFNVLLRPHAKMRVYLNLTVAEKNYGK---PARE--TMCPNDGFVYFRNSELISGQLGK 1114
            QLF++LLRPHA  +VY+NLTV EK Y K     RE  T+CPNDGFVYFRN+ELISGQ+GK
Sbjct: 593  QLFSLLLRPHANFKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNTELISGQIGK 652

Query: 1113 ATLGNGNKDGLYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIE 934
             TLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP + LI +
Sbjct: 653  VTLGNGNKDGLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIKK 712

Query: 933  KEKEIRSGYGKCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQ 754
            K++ +  GY KCD+ I+ +NKGKLEL  G DA  TLE +IT VLN +R    KVCM  L 
Sbjct: 713  KDETLSEGYKKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLH 772

Query: 753  WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKG 574
            WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGF+DRSLPHFP  +K P AKG
Sbjct: 773  WRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKG 832

Query: 573  FVANSFYSGLTATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRN 394
            FVANSFYSGL+ATEFFFHTM GREGLVDTAVKTADTGYMSR+LMK++EDL + YDYTVRN
Sbjct: 833  FVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRN 892

Query: 393  ASASIIQFVYGDDCMDPAQMEEKTGQPLNFDRILMKVKATCP-AGDEISLSPSEICQKTD 217
            A  SI+QF YGDD MDP  ME K G+PLNF+R+ +K KA CP   D+  LS S++C+   
Sbjct: 893  AGGSIVQFCYGDDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSDVCKVVQ 952

Query: 216  ERLSEHDMTP-------EGGCSEAFRDSLSKFLKEKCVASLRNTMQNLEMDGDKQGGEDR 58
            E+LSE  ++        E G S  F  SL  F+K+           N ++  +    ++ 
Sbjct: 953  EKLSEFGVSREVEKGVLEVGFSADFVQSLQSFIKD-----------NTKLTEETFTDDNS 1001

Query: 57   RSLEKFYPNISGITSRQLE 1
            + L+KF   ISGIT  QLE
Sbjct: 1002 QILKKFGERISGITRAQLE 1020


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score = 1287 bits (3330), Expect = 0.0
 Identities = 665/1008 (65%), Positives = 776/1008 (76%), Gaps = 18/1008 (1%)
 Frame = -3

Query: 2970 SEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMGPTLK-GGVCETCHGTFSQCPGHYGYL 2794
            +EILKAAE +V+ G YYD ++KPI+ GLLDP +GP  K    CETC   F +CPGH+GYL
Sbjct: 5    AEILKAAECQVHLGSYYDSTRKPIQAGLLDPRLGPATKQSSACETCGADFHECPGHFGYL 64

Query: 2793 TLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKDRLAFLQQMRNPKREPLMKTQLQKKV 2614
             L LPV++ GY++NILDILKCICK CS +L  EK   A L++MRNP+ E L K++L KK+
Sbjct: 65   NLVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSELVKKI 124

Query: 2613 VEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLGIVHERSKVNDSSSNEYTSAVSHTQE 2434
            V+KC+ + ++  KA  C+RCG +NGMVKK   +L I+H+R+K+ D    E  SA++HT+E
Sbjct: 125  VKKCSSMTSN--KAVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAHTKE 182

Query: 2433 YNASGITVPDEMNPKVVYSLLKNVKDEDCELLYLSDRPEKLMXXXXXXXXXXXXXXXXVD 2254
              A        + P  V SL K + +EDCE+L L DRPEKL+                 D
Sbjct: 183  SRAPISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSVFTD 242

Query: 2253 GGTQSNENDITERLKRIIQANASLHQEISDTSLPT-KSLNAWIDLQVEVAQYINSDVRGI 2077
            G  QSNENDITERLK+IIQANASL  E+ +  +   K L++W  LQ  VA Y+NSDVR +
Sbjct: 243  G-LQSNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVR-V 300

Query: 2076 PFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAVPILVAR 1897
            P + +  +PLSGFVQRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+PI +AR
Sbjct: 301  PNNVEVGKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMAR 360

Query: 1896 ILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIKQPGADPISLISAARKRYADELKFGDI 1717
            IL+YPERVSHHNIEKLRQ V NGP KYPGA  ++ P      LI + RK  A+EL FG I
Sbjct: 361  ILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELTFGCI 420

Query: 1716 VDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHV 1537
            VDRHLEDGD +LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHV
Sbjct: 421  VDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHV 480

Query: 1536 PQTEEARTEALLLMGV-QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLIC 1360
            PQTEEARTEALLLMGV QNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRA+FSL+C
Sbjct: 481  PQTEEARTEALLLMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAFSLMC 540

Query: 1359 SYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLRPHAKMRVYLNLTVAEKNYGKPAR-- 1186
            SYM DGMD IDLPTPA++KP+ELWTGKQLF+VLLRP+A +RVY+NL V EK Y KP +  
Sbjct: 541  SYMNDGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKPKKGD 600

Query: 1185 ----ETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLLRDYGSHAAATCMNRLA 1018
                ETMCPNDGFVY RNSELISGQLGKATLGNGNKDGLYS+LLRDY  HAAATCMNRLA
Sbjct: 601  KREKETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLA 660

Query: 1017 KLS--ARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYGKCDDFIEEYNKGKLELQPGH 844
            KL   ARWIGNHGFSIGIDDVQP  KLI  K K I +GY +CD  IE+YN+GKL L+PG 
Sbjct: 661  KLRQVARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGC 720

Query: 843  DAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQCGSKGSPINISQMVACVGQQ 664
            DA  TLE++IT+ LN +R E   VCM  L WRNSPLIMSQCGSKGS INISQMVACVGQQ
Sbjct: 721  DATQTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQ 780

Query: 663  SVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGLTATEFFFHTMAGREGLVDTA 484
            SVGGRRAP+GF+DRSLPHFP+KSK P AKGFVANSFYSGL ATEFFFHTMAGREGLVDTA
Sbjct: 781  SVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTA 840

Query: 483  VKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVYGDDCMDPAQMEEKTGQPLNF 304
            VKTADTGYMSRRL+K LEDLSIQYD TVRNAS  I+QF+YGDD +DPA ME K G PLN 
Sbjct: 841  VKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNL 900

Query: 303  DRILMKVKATCPAGDEISLSPSEICQKTDERLSEHDMTPEGGCSEAFRDSLSKFL----- 139
            DR+  KVKATCP  +E  LSP +I    +  L +HDM   G CSEAF+ SL+ FL     
Sbjct: 901  DRLFSKVKATCPVREEDYLSPLDISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAK 960

Query: 138  KEKCVASLRNTMQNLEMDGDKQGG--EDRRSLEKFYPNISGITSRQLE 1
            + + +  L + +++   +  + GG   + + +E+    I G++ RQ+E
Sbjct: 961  RLESMMKLADGVEDPTSENIQTGGIRGNSKIIERLAHKIFGVSERQIE 1008


>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
            lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
            ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
          Length = 1376

 Score = 1285 bits (3324), Expect = 0.0
 Identities = 646/976 (66%), Positives = 760/976 (77%), Gaps = 6/976 (0%)
 Frame = -3

Query: 3048 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 2869
            +FTKQPYIEDVGP +I+SI FS L + E++KAAEV+V++  YY+ + KP E+GLLD  MG
Sbjct: 8    EFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGLLDARMG 67

Query: 2868 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 2689
            P  K  +C TC G F  CPGHYGYL L LPVY+ G+   ILDILKCICK+CS++LL EK 
Sbjct: 68   PPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNMLLDEKL 127

Query: 2688 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 2509
                L++MRNPK EPL KT+L K VV+KC+ + +  ++   C +CG++NGMVKK    +G
Sbjct: 128  YEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMAS--QRIITCKKCGYLNGMVKKIAAQMG 185

Query: 2508 I--VHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCELLY 2335
            I   H+RSK++    +E  SA+SHT+E   +   +   ++P +V  L K + D+DCELLY
Sbjct: 186  IGISHDRSKIHGGEVDECKSAISHTKESTRAINPLTYVLDPNLVLGLFKGMSDKDCELLY 245

Query: 2334 LSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSL 2155
            ++ RPE L+                + GGT+SNENDITERLK IIQ NA LH+ +S  + 
Sbjct: 246  IAHRPENLITTCMLVPPLSIRPSVMI-GGTRSNENDITERLKLIIQNNACLHRILSQPTT 304

Query: 2154 PTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVE 1975
              K++  W  +Q EVA+YINS+VRG+    +   PLSG +QRLKGKQGRFR NLSGKRVE
Sbjct: 305  SPKNMQVWDTVQSEVAKYINSEVRGVQNQPEKT-PLSGLLQRLKGKQGRFRANLSGKRVE 363

Query: 1974 YTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIK 1795
            YTGRTVISPDPNLKITEV +PIL+ARILT+PE VS HNIEKLRQCVRNGPNKYPGA+ ++
Sbjct: 364  YTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVR 423

Query: 1794 QPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPW 1615
             P     +L+   RKR ADEL  G IVDRHLE+GD +LFNRQPSLHRMSIMCHRARIMPW
Sbjct: 424  YPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPW 483

Query: 1614 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQ 1435
            RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVASTQ
Sbjct: 484  RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQ 543

Query: 1434 DFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLR 1255
            DFLT+SFLITRKDTFYDRA+FSLICSYMGDGMD IDLPTP ++KP+ELWTGKQLF+VLLR
Sbjct: 544  DFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTILKPIELWTGKQLFSVLLR 603

Query: 1254 PHAKMRVYLNLTVAEKNYGKPAR---ETMCPNDGFVYFRNSELISGQLGKATLGNGNKDG 1084
            P+A +RVY+ L V EKN+ K      ETMC NDG+VYFRNSELISGQLGKATLGNGNKDG
Sbjct: 604  PNASVRVYVTLNVKEKNFKKGEHGFDETMCVNDGWVYFRNSELISGQLGKATLGNGNKDG 663

Query: 1083 LYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYG 904
            LYS+LLRDY SHAAA CMNRLAKLSARWIG HGFSIGIDDVQP ++L  E++  I+ GY 
Sbjct: 664  LYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELNKERKDSIQFGYD 723

Query: 903  KCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQ 724
            +C   IEE+N+G L+L+ G D   +LEA+IT +LN IR  T K CM  L WRNSPLIMSQ
Sbjct: 724  QCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIMSQ 783

Query: 723  CGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGL 544
            CGSKGSPINISQMVACVGQQ+V G RAP+GF+DRSLPHFP+ SK P AKGFVANSFYSGL
Sbjct: 784  CGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGL 843

Query: 543  TATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVY 364
            TATEFFFHTM GREGLVDTAVKTA TGYMSRRLMKALEDL + YD TVRNAS  I+QF Y
Sbjct: 844  TATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTY 903

Query: 363  GDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEIS-LSPSEICQKTDERLSEHDMTP 187
            GDD MDPA ME K G PLNFDR+ +K++ATCP     + LS  E+ QK +E L  HD + 
Sbjct: 904  GDDGMDPALMEGKDGAPLNFDRLFLKIQATCPPRSHHNYLSSEELSQKFEEELVRHDKSR 963

Query: 186  EGGCSEAFRDSLSKFL 139
               C++AF  SL +F+
Sbjct: 964  V--CTDAFVKSLREFV 977


>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
            gi|482548169|gb|EOA12363.1| hypothetical protein
            CARUB_v10025743mg [Capsella rubella]
          Length = 1376

 Score = 1282 bits (3318), Expect = 0.0
 Identities = 643/976 (65%), Positives = 759/976 (77%), Gaps = 6/976 (0%)
 Frame = -3

Query: 3048 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 2869
            ++TK+PYIEDVG  +I+SI FS L + E++KAAEV+V++  YYDP+ KP E GLLDP MG
Sbjct: 8    EYTKKPYIEDVGSLKIKSINFSMLSDLEVMKAAEVQVWKNSYYDPNCKPFEGGLLDPRMG 67

Query: 2868 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 2689
            P  K  +C TC G F  CPGHYGYL L LPVY+ GY   ILDILKCICK CS++LL EK 
Sbjct: 68   PPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNIGYFNFILDILKCICKCCSNMLLDEKL 127

Query: 2688 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKMLG 2509
                L++MRNPK EPL KT+L K VV+KC+ + +  ++   C +CG++NGMVKK    +G
Sbjct: 128  YEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMAS--QRIITCKKCGYLNGMVKKIPAQMG 185

Query: 2508 I--VHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCELLY 2335
            I   H+RSK++    +E+ +A+SH +E   +   +   ++P VV  L K + D+DCELLY
Sbjct: 186  IGISHDRSKIHGGEVDEFKAAISHIKESTQAINPLTYVLDPNVVLGLFKGMSDKDCELLY 245

Query: 2334 LSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSL 2155
            ++ RPE L+                V GG+QSNEND++ RLK+IIQ NASLH+ +S  + 
Sbjct: 246  IAHRPENLIITCMLVPPLSIRPSVMV-GGSQSNENDLSARLKQIIQDNASLHRILSQPTT 304

Query: 2154 PTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVE 1975
              K++  W  +Q EVA+YINS+VRG+  +   ++P+SG +QRLKGKQGRFR NLSGKRVE
Sbjct: 305  SAKNMQVWDTVQSEVAKYINSEVRGVQ-NQPDSKPMSGILQRLKGKQGRFRANLSGKRVE 363

Query: 1974 YTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIK 1795
            YTGRTVISPDPNLKITEV +PIL+ARILT+PE VS HNIEKLRQCVRNGPNKYPGA+ ++
Sbjct: 364  YTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVR 423

Query: 1794 QPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPW 1615
             P     +L+   RKR ADEL  G IVDRHLE+GD +LFNRQPSLHRMSIMCHRARIMPW
Sbjct: 424  YPDGSSRALVGDYRKRIADELAIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIMPW 483

Query: 1614 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQ 1435
            RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVASTQ
Sbjct: 484  RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQ 543

Query: 1434 DFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLR 1255
            DFLTSSFLITRKDTFYDRA+FSLICSYMGDGMD IDLPTP ++KP+ELWTGKQ+F+VLLR
Sbjct: 544  DFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTVLKPIELWTGKQIFSVLLR 603

Query: 1254 PHAKMRVYLNLTVAEKNYGKPAR---ETMCPNDGFVYFRNSELISGQLGKATLGNGNKDG 1084
            P+A +RVY+ L V EKN+ K      ETMC NDG+VYFRNSELISGQLGKATLGNGNKDG
Sbjct: 604  PNASVRVYVTLNVKEKNFKKGNHGFDETMCTNDGWVYFRNSELISGQLGKATLGNGNKDG 663

Query: 1083 LYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYG 904
            LYS+LLRDY SHAAA CMNRLAKLSARWIG HGFSIGIDDVQP ++L  +++  I+SGY 
Sbjct: 664  LYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSRQRKDAIQSGYD 723

Query: 903  KCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQ 724
             C   IE +N+G L+L+ G D   TLEA IT +LN IR +T K CM  L WRNSPLIMSQ
Sbjct: 724  DCHSIIENFNRGNLQLKAGLDGAKTLEAGITGILNTIREDTGKACMDGLHWRNSPLIMSQ 783

Query: 723  CGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGL 544
            CGSKGSPINISQMVACVGQQ+V G RAP+GF+DRSLPHFP+ SK P AKGFVANSFYSGL
Sbjct: 784  CGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGL 843

Query: 543  TATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVY 364
            TATEFFFHTM GREGLVDTAVKTA TGYMSRRLMKALEDL + YD TVRNAS  I+QF Y
Sbjct: 844  TATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTY 903

Query: 363  GDDCMDPAQMEEKTGQPLNFDRILMKVKATCPAGDEIS-LSPSEICQKTDERLSEHDMTP 187
            GDD MDPA ME K G PLNF+R+ +K++ATCP     + LS  E+ QK +E L  HD   
Sbjct: 904  GDDGMDPALMEGKDGAPLNFNRLFLKIQATCPPRSHHNYLSSEELSQKFEEELVRHDKNR 963

Query: 186  EGGCSEAFRDSLSKFL 139
               C++AF  SL  F+
Sbjct: 964  V--CTDAFVKSLRDFV 977


>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
          Length = 1383

 Score = 1272 bits (3292), Expect = 0.0
 Identities = 641/976 (65%), Positives = 757/976 (77%), Gaps = 6/976 (0%)
 Frame = -3

Query: 3048 QFTKQPYIEDVGPRRIESICFSTLGESEILKAAEVEVYRGVYYDPSKKPIEHGLLDPHMG 2869
            +FTK+PYIEDVGP +I+SI FS L + E++KAAEV+V+    YD S KP E+GLLDP MG
Sbjct: 8    EFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRMG 67

Query: 2868 PTLKGGVCETCHGTFSQCPGHYGYLTLTLPVYHAGYLTNILDILKCICKQCSSLLLGEKD 2689
            P  K  +C TC G F  CPGHYGYL L LPVY+ GY   ILDILKCICK+CS++LL EK 
Sbjct: 68   PPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNMLLDEKL 127

Query: 2688 RLAFLQQMRNPKREPLMKTQLQKKVVEKCNRLVASGRKATVCSRCGFVNGMVKKNTKM-- 2515
                L++MRNP+ EPL KT+L K VV+KC+ + +  ++   C +CG++NGMVKK      
Sbjct: 128  YEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMAS--QRIITCKKCGYLNGMVKKIAAQFG 185

Query: 2514 LGIVHERSKVNDSSSNEYTSAVSHTQEYNASGITVPDEMNPKVVYSLLKNVKDEDCELLY 2335
            +GI H+RSK++    +E  SA+SHT++  A+   +   ++P +V  L K + D+DCELLY
Sbjct: 186  IGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDKDCELLY 245

Query: 2334 LSDRPEKLMXXXXXXXXXXXXXXXXVDGGTQSNENDITERLKRIIQANASLHQEISDTSL 2155
            ++ RPE L+                + GG QSNEND+T RLK+II  NASLH+ +S  + 
Sbjct: 246  IAYRPENLIITCMLVPPLSIRPSVMI-GGIQSNENDLTARLKQIILGNASLHKILSQPTS 304

Query: 2154 PTKSLNAWIDLQVEVAQYINSDVRGIPFSAQAARPLSGFVQRLKGKQGRFRGNLSGKRVE 1975
              K++  W  +Q+EVA+YINS+VRG     +   PLSG +QRLKGK GRFR NLSGKRVE
Sbjct: 305  SPKNMQVWDTVQIEVARYINSEVRGCQNQPEE-HPLSGILQRLKGKGGRFRANLSGKRVE 363

Query: 1974 YTGRTVISPDPNLKITEVAVPILVARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKFIK 1795
            +TGRTVISPDPNLKITEV +PIL+A+ILT+PE VS HNIEKLRQCVRNGPNKYPGA+ ++
Sbjct: 364  FTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVR 423

Query: 1794 QPGADPISLISAARKRYADELKFGDIVDRHLEDGDCILFNRQPSLHRMSIMCHRARIMPW 1615
             P     +L+   RKR ADEL  G IVDRHL++GD +LFNRQPSLHRMSIMCHRARIMPW
Sbjct: 424  YPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPW 483

Query: 1614 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVASTQ 1435
            RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVASTQ
Sbjct: 484  RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQ 543

Query: 1434 DFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALVKPVELWTGKQLFNVLLR 1255
            DFLTSSFLITRKDTFYDRA+FSLICSYMGDGMD IDLPTP ++KP+ELWTGKQ+F+VLLR
Sbjct: 544  DFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQIFSVLLR 603

Query: 1254 PHAKMRVYLNLTVAEKNYGKPAR---ETMCPNDGFVYFRNSELISGQLGKATLGNGNKDG 1084
            P+A +RVY+ L V EKN+ K      ETMC NDG+VYFRNSELISGQLGKATLGNGNKDG
Sbjct: 604  PNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQLGKATLGNGNKDG 663

Query: 1083 LYSVLLRDYGSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPPDKLIIEKEKEIRSGYG 904
            LYS+LLRDY SHAAA CMNRLAKLSARWIG HGFSIGIDDVQP ++L  E++  I+ GY 
Sbjct: 664  LYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQFGYD 723

Query: 903  KCDDFIEEYNKGKLELQPGHDAVLTLEAKITQVLNNIRGETAKVCMGNLQWRNSPLIMSQ 724
            +C   IEE+N+G L+L+ G D   +LEA+IT +LN IR  T K CM  L WRNSPLIMSQ
Sbjct: 724  QCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIMSQ 783

Query: 723  CGSKGSPINISQMVACVGQQSVGGRRAPNGFVDRSLPHFPKKSKIPQAKGFVANSFYSGL 544
            CGSKGSPINISQMVACVGQQ+V G RAP+GF+DRSLPHFP+ SK P AKGFVANSFYSGL
Sbjct: 784  CGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGL 843

Query: 543  TATEFFFHTMAGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDYTVRNASASIIQFVY 364
            TATEFFFHTM GREGLVDTAVKTA TGYMSRRLMKALEDL + YD TVRNAS  I+QF Y
Sbjct: 844  TATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTY 903

Query: 363  GDDCMDPAQMEEKTGQPLNFDRILMKVKATC-PAGDEISLSPSEICQKTDERLSEHDMTP 187
            GDD MDPA ME K G PLNF+R+ +KV+ATC P      LS  E+ QK +E L  HD + 
Sbjct: 904  GDDGMDPALMEGKDGAPLNFNRLFLKVQATCPPRSHHTYLSSEELSQKFEEELVRHDKSR 963

Query: 186  EGGCSEAFRDSLSKFL 139
               C++AF  SL +F+
Sbjct: 964  V--CTDAFVKSLREFV 977