BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00006883
         (1086 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|5...   352   2e-94
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I...   350   4e-94
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr...   346   8e-93
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I...   346   8e-93
gb|EOY30723.1| Eukaryotic rpb5 RNA polymerase subunit family pro...   345   1e-92
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a...   340   6e-91
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat...   337   4e-90
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ...   337   6e-90
ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutr...   336   8e-90
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun...   336   1e-89
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a...   336   1e-89
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I...   336   1e-89
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps...   335   2e-89
ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, I...   330   5e-88
gb|EMJ19617.1| hypothetical protein PRUPE_ppa011542mg [Prunus pe...   329   1e-87
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin...   327   5e-87
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ...   326   9e-87
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin...   326   1e-86
gb|AFK38034.1| unknown [Lotus japonicus]                              325   1e-86
emb|CBI28035.3| unnamed protein product [Vitis vinifera]              324   3e-86

>ref|XP_002331171.1| predicted protein [Populus trichocarpa]
           gi|566176743|ref|XP_006381734.1| DNA-directed RNA
           polymerase family protein [Populus trichocarpa]
           gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 206

 Score =  352 bits (902), Expect = 2e-94
 Identities = 175/206 (84%), Positives = 188/206 (91%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M LTEEEI +L RIRK V+QMLKDRGYFV D EI+M + +F  K G NMKREDLVINKTK
Sbjct: 1   MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           RNDSSDQIYVFFP+E KVGVK MKTYTNRMKSENVFRAILVVQQNLTP ARTC+NEISTK
Sbjct: 61  RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQEAELLVNIK HVLVPEHQ+LS EEKKTLLERYTVKETQLPRIQ+TDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRY+TYR+V+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVI 206


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 isoform 1 [Vitis vinifera]
           gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1 isoform 2
           [Vitis vinifera]
          Length = 206

 Score =  350 bits (899), Expect = 4e-94
 Identities = 175/206 (84%), Positives = 190/206 (92%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M+ +EEEI++LFRIRK V+QMLKDRGYFV D EI M K +F+ K GENMKREDLVINK K
Sbjct: 1   MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           R DSSDQIYVFFP+EQKVGVK MKTYTNRMKSENVFRAILVVQQNLTP ARTC+NEISTK
Sbjct: 61  RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQEAELLVNIK HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQV+DPIARY+G
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRYITYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|567918420|ref|XP_006451216.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
           gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Citrus sinensis] gi|568843558|ref|XP_006475671.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like isoform X2 [Citrus sinensis]
           gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X3
           [Citrus sinensis] gi|557554441|gb|ESR64455.1|
           hypothetical protein CICLE_v10009504mg [Citrus
           clementina] gi|557554442|gb|ESR64456.1| hypothetical
           protein CICLE_v10009504mg [Citrus clementina]
          Length = 206

 Score =  346 bits (888), Expect = 8e-93
 Identities = 172/206 (83%), Positives = 187/206 (90%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M L++EEI +LFRIR+ V+QML+DRGYFV D EI M K +F+ K GENMKREDLVINK  
Sbjct: 1   MTLSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKAL 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           RNDSSDQIYVFFPDEQKVGVK MKTYTNRMKSENVFRAILVVQQNLTP ARTC+ EIS K
Sbjct: 61  RNDSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQEAELLVNIK HVLVPEHQ+L+ EEKKTLL+RYTVKETQLPRIQVTDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRY+TYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like isoform 1 [Solanum lycopersicum]
           gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           isoform 2 [Solanum lycopersicum]
          Length = 206

 Score =  346 bits (888), Expect = 8e-93
 Identities = 169/206 (82%), Positives = 189/206 (91%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           MAL+EEE++KLFR+RK +++ML DRGY V D EI M K +FLQK GENMKREDLVI K K
Sbjct: 1   MALSEEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           RN+SSDQIYVFFP+E KVGVK MKTYT RMK E+VF+AIL+VQQNLTP ARTC++EISTK
Sbjct: 61  RNNSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQEAE+LVNIKNHVL+PEHQLLSPEEKKTLLERYTVKETQLPRIQ+TDPIARYYG
Sbjct: 121 FHLEVFQEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRYITYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>gb|EOY30723.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 206

 Score =  345 bits (886), Expect = 1e-92
 Identities = 169/206 (82%), Positives = 189/206 (91%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M L+++EI +LFRIRK V+QMLKDRGYFV D EI M K +F+ K GENMKREDLVINKTK
Sbjct: 1   MVLSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           RND+SDQIYVFFPDE KVGVK MKTYTNRMKSENVFRA+LVVQQNLTP ARTC+NEIS+K
Sbjct: 61  RNDNSDQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQE+ELLVN+K H LVPEHQ+L+ EEKKTLL+RYTVKETQLPRIQV+DPIARYYG
Sbjct: 121 FHLEVFQESELLVNVKEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRY+TYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Solanum tuberosum]
          Length = 206

 Score =  340 bits (872), Expect = 6e-91
 Identities = 165/206 (80%), Positives = 188/206 (91%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           MAL+EEE+++LFR+RK +++ML DRGY V D EI M K +FLQK GENMKREDLV+ K K
Sbjct: 1   MALSEEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVLQKAK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           RN+SSDQIYVFFP+E KVGVK MKTYT RMK E+VF+AIL+VQQNLTP ARTC++EISTK
Sbjct: 61  RNNSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQEAE+LVNIKNHVL+PEH LLSPEEKK+LLERYTVKETQLPRIQ+TDPIARYYG
Sbjct: 121 FHLEVFQEAEMLVNIKNHVLIPEHLLLSPEEKKSLLERYTVKETQLPRIQITDPIARYYG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRYITYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 205

 Score =  337 bits (865), Expect = 4e-90
 Identities = 162/204 (79%), Positives = 189/204 (92%)
 Frame = -1

Query: 741 LTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTKRN 562
           LTEEEI +L+RI+K ++QMLKDRGYF+AD E+ M K++F++K+G+NMKREDLV  K KRN
Sbjct: 2   LTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKRN 61

Query: 561 DSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTKFH 382
           D+SDQ+Y+FFPDE KVGVK MK YTNRMKSENV+RAILVVQQNLTP ARTC++EIS+KFH
Sbjct: 62  DNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFH 121

Query: 381 LEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYGLK 202
           LEVFQEAE+LVNIK HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQVTDPIARY+GLK
Sbjct: 122 LEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLK 181

Query: 201 RGQVVRISRPSETAGRYITYRFVV 130
           RGQVV+I RPSETAGRY+TYR+VV
Sbjct: 182 RGQVVKIIRPSETAGRYVTYRYVV 205


>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
           gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
           Full=DNA-directed RNA polymerases II and IV subunit 5A;
           Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
           II subunit E; AltName: Full=RNA polymerase I, II and III
           24.3 kDa subunit; Short=AtRPB24.3
           gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
           [Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
           polymerase I, II and III 24.3 kDa subunit [Arabidopsis
           thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
           NRPB5 [Arabidopsis thaliana]
          Length = 205

 Score =  337 bits (863), Expect = 6e-90
 Identities = 161/204 (78%), Positives = 189/204 (92%)
 Frame = -1

Query: 741 LTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTKRN 562
           LTEEE+ +L+RI+K ++QML+DRGYF+AD E+ M K++F++K+G+NMKREDLV  K KRN
Sbjct: 2   LTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRN 61

Query: 561 DSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTKFH 382
           D+SDQ+Y+FFPDE KVGVK MK YTNRMKSENVFRAILVVQQNLTP ARTC++EIS+KFH
Sbjct: 62  DNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFH 121

Query: 381 LEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYGLK 202
           LEVFQEAE+LVNIK HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQVTDPIARY+GLK
Sbjct: 122 LEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLK 181

Query: 201 RGQVVRISRPSETAGRYITYRFVV 130
           RGQVV+I RPSETAGRY+TYR+VV
Sbjct: 182 RGQVVKIIRPSETAGRYVTYRYVV 205


>ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutrema salsugineum]
           gi|557107329|gb|ESQ47636.1| hypothetical protein
           EUTSA_v10021534mg [Eutrema salsugineum]
          Length = 206

 Score =  336 bits (862), Expect = 8e-90
 Identities = 163/206 (79%), Positives = 188/206 (91%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M LTEEEI +L+RI+K ++QMLKDRGYF+AD EI M   +F++K+G+NMKREDLV  K K
Sbjct: 1   MTLTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMTLGQFIRKHGDNMKREDLVTLKAK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           RND++DQ+Y+FFPDE KVGVK MK YTNRMKSENVFRAILVVQQNLTP ARTC++EIS+K
Sbjct: 61  RNDNNDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQEAE+LVNIK HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQVTDPIARY+G
Sbjct: 121 FHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRY+TYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206


>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score =  336 bits (861), Expect = 1e-89
 Identities = 166/213 (77%), Positives = 189/213 (88%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M L+E+EI +LFRIR+ V+QML+DR Y V D E+ M K +F  K GENMKREDL+INK++
Sbjct: 1   MVLSEDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSR 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           RNDS DQIYVFFP+EQKVGVK MKTY NRMKSENV RA+LVVQQNLTP ARTC++EISTK
Sbjct: 61  RNDSPDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQEAELLVNIK HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQVTDPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV*ASLDII 109
           LKRGQVV+I RPSETAGRYITYR+V   +L+++
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVGVWTLELL 213


>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Solanum tuberosum]
          Length = 206

 Score =  336 bits (861), Expect = 1e-89
 Identities = 162/206 (78%), Positives = 186/206 (90%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M L+EEE+++LFR+RK +++ML DRGY V D EI M K EFLQK GENMKREDLV+ K K
Sbjct: 1   MTLSEEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKYEFLQKYGENMKREDLVLQKAK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           RN+SSDQIYVFFP+E KVGVK MKTYT RMK E+VF+AIL+VQQNLTP ARTC++EIS K
Sbjct: 61  RNNSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISIK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQEAE+LVNIKNHVL+P+HQ L+PEEKKTLLERYTVKETQLPRIQ+TDPIARYYG
Sbjct: 121 FHLEVFQEAEMLVNIKNHVLIPKHQTLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRY+TYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 207

 Score =  336 bits (861), Expect = 1e-89
 Identities = 167/207 (80%), Positives = 188/207 (90%), Gaps = 1/207 (0%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M L+EEEI +LFRIRK V QML+DRGYFV D EI+M + +F QK GENMKRED+VINK+K
Sbjct: 1   MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           RNDSSDQIYVFFP+E KVG+K +KTYT RMKSENVFRAILVVQQNLTP AR C++E ++K
Sbjct: 61  RNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATSK 120

Query: 387 -FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYY 211
            FHLEVFQEAELLVNIK+HVLVPEHQLL+ EEKKTLLERYTVKETQLPRIQVTDP+ARYY
Sbjct: 121 SFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYY 180

Query: 210 GLKRGQVVRISRPSETAGRYITYRFVV 130
           GLKRGQVV+I RPSETAGRY+TYR+VV
Sbjct: 181 GLKRGQVVKIIRPSETAGRYVTYRYVV 207


>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
           gi|482567281|gb|EOA31470.1| hypothetical protein
           CARUB_v10014656mg [Capsella rubella]
          Length = 205

 Score =  335 bits (859), Expect = 2e-89
 Identities = 162/204 (79%), Positives = 187/204 (91%)
 Frame = -1

Query: 741 LTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTKRN 562
           LTEEEI +L+RI K ++QMLKDRGYF+AD EI + K++F++K G+NMKREDLV  K KRN
Sbjct: 2   LTEEEIKRLYRIHKTLMQMLKDRGYFIADSEITITKQQFIRKYGDNMKREDLVTLKAKRN 61

Query: 561 DSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTKFH 382
           D+SDQ+Y+FFPDE KVGVK MK YTNRMKSENV+RAILVVQQNLTP ARTC++EIS+KFH
Sbjct: 62  DNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFH 121

Query: 381 LEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYGLK 202
           LEVFQEAE+LVNIK HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQVTDPIARY+GLK
Sbjct: 122 LEVFQEAEMLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVTDPIARYFGLK 181

Query: 201 RGQVVRISRPSETAGRYITYRFVV 130
           RGQVV+I RPSETAGRY+TYR+VV
Sbjct: 182 RGQVVKIIRPSETAGRYVTYRYVV 205


>ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 208

 Score =  330 bits (847), Expect = 5e-88
 Identities = 165/208 (79%), Positives = 188/208 (90%), Gaps = 2/208 (0%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M L+EEEI +LFRIRK V QML+DRGYFV D EI+M + +F QK GENMKRED+VINK+K
Sbjct: 1   MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60

Query: 567 RNDSSDQIYV-FFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEIST 391
           RNDSSDQ+Y+ FFP+E KVG+K +KTYT RMKSENVFRAILVVQQNLTP AR C++E ++
Sbjct: 61  RNDSSDQVYICFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATS 120

Query: 390 K-FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARY 214
           K FHLEVFQEAELLVNIK+HVLVPEHQLL+ EEKKTLLERYTVKETQLPRIQVTDP+ARY
Sbjct: 121 KSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARY 180

Query: 213 YGLKRGQVVRISRPSETAGRYITYRFVV 130
           YGLKRGQVV+I RPSETAGRY+TYR+VV
Sbjct: 181 YGLKRGQVVKIIRPSETAGRYVTYRYVV 208


>gb|EMJ19617.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
          Length = 206

 Score =  329 bits (844), Expect = 1e-87
 Identities = 162/206 (78%), Positives = 181/206 (87%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M   EEEI +L+R+RK V+QMLKDR Y V D EI M + +F  K GENMKREDL INKTK
Sbjct: 1   MVYPEEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           R+DSSDQIYVFFP+E KVGVK MKTYTNRMKSENV RA+LV QQNLTP A+TC++EIS+K
Sbjct: 61  RSDSSDQIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQEAELLVNIK HVLVPEH +L+ EEKKTLLERYTVKETQLPRIQVTDPIA+YYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRYITYR+V+
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVI 206


>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
           gi|255625665|gb|ACU13177.1| unknown [Glycine max]
          Length = 206

 Score =  327 bits (838), Expect = 5e-87
 Identities = 161/206 (78%), Positives = 182/206 (88%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M L+EEE+ +L+RIRK V+QML+DRG+ V D EI M K EF  K GE+MKREDLVINK+K
Sbjct: 1   MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           +++S DQIYVFFPDE KVGVK MKTYTNRM SENV+RAILV Q NLTP ARTC++EIS+K
Sbjct: 61  KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQEAELLVNIK H LVPEHQ+L+  EKKTLLERYTVKETQLPRIQVTDP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRY+TYRFVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206


>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|355511987|gb|AES93610.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 [Medicago truncatula]
          Length = 410

 Score =  326 bits (836), Expect = 9e-87
 Identities = 161/209 (77%), Positives = 182/209 (87%)
 Frame = -1

Query: 756 KEKMALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVIN 577
           K+ M  +EEEI +L+RIRK V+QMLKDR Y V D E+ M K +F  K GENMKREDLVIN
Sbjct: 202 KKTMVFSEEEITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVIN 261

Query: 576 KTKRNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEI 397
           KTK++  SDQIYVFFP+E KVGVK MKTYTNRM SENV+RAILV Q +LTP A+TCV+EI
Sbjct: 262 KTKKDKPSDQIYVFFPEEAKVGVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEI 321

Query: 396 STKFHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIAR 217
           ++KFHLEVFQEAELLVNIK HVLVPEHQ+L+  EKKTLLERYTVKETQLPRIQVTDP+AR
Sbjct: 322 ASKFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVAR 381

Query: 216 YYGLKRGQVVRISRPSETAGRYITYRFVV 130
           YYGLKRGQVV+I RPSETAGRY+TYRFVV
Sbjct: 382 YYGLKRGQVVKIIRPSETAGRYVTYRFVV 410


>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
           gi|255627545|gb|ACU14117.1| unknown [Glycine max]
          Length = 206

 Score =  326 bits (835), Expect = 1e-86
 Identities = 161/206 (78%), Positives = 181/206 (87%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           M L+EEEI +L+RIRK V+QML+DR + V D EI M K EF  K GE+MKREDLVINK+K
Sbjct: 1   MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           +++S DQIYVFFPDE KVGVK MKTYTNRM SENV+RAILV Q NLTP ARTC++EIS+K
Sbjct: 61  KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           FHLEVFQEAELLVNIK H LVPEHQ+L+  EKKTLLERYTVKETQLPRIQVTDP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRY+TYRFVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206


>gb|AFK38034.1| unknown [Lotus japonicus]
          Length = 206

 Score =  325 bits (834), Expect = 1e-86
 Identities = 162/206 (78%), Positives = 179/206 (86%)
 Frame = -1

Query: 747 MALTEEEINKLFRIRKNVLQMLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTK 568
           MALTEE+I KL RIRK V+QML+DR Y V D EI M + EF  K G+NMKREDL INKTK
Sbjct: 1   MALTEEDITKLHRIRKTVMQMLRDRNYLVGDFEINMSRHEFKTKYGDNMKREDLTINKTK 60

Query: 567 RNDSSDQIYVFFPDEQKVGVKQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTK 388
           ++  SDQIYVFFPDE KVGVK MKTYTNRM SENVFRAILV Q NLTP A+TC++E+S+K
Sbjct: 61  KDGPSDQIYVFFPDEPKVGVKTMKTYTNRMNSENVFRAILVCQSNLTPFAKTCISEMSSK 120

Query: 387 FHLEVFQEAELLVNIKNHVLVPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYG 208
           F LEVFQEAELLVNIK HVLVPEHQ+L+  EKKTLLERYTVKETQLPRIQ+TDP+ARYYG
Sbjct: 121 FQLEVFQEAELLVNIKEHVLVPEHQILNETEKKTLLERYTVKETQLPRIQITDPVARYYG 180

Query: 207 LKRGQVVRISRPSETAGRYITYRFVV 130
           LKRGQVV+I RPSETAGRYITYRFVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRFVV 206


>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score =  324 bits (831), Expect = 3e-86
 Identities = 162/186 (87%), Positives = 172/186 (92%)
 Frame = -1

Query: 687 MLKDRGYFVADKEIEMEKREFLQKNGENMKREDLVINKTKRNDSSDQIYVFFPDEQKVGV 508
           MLKDRGYFV D EI M K +F+ K GENMKREDLVINK KR DSSDQIYVFFP+EQKVGV
Sbjct: 1   MLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEEQKVGV 60

Query: 507 KQMKTYTNRMKSENVFRAILVVQQNLTPVARTCVNEISTKFHLEVFQEAELLVNIKNHVL 328
           K MKTYTNRMKSENVFRAILVVQQNLTP ARTC+NEISTKFHLEVFQEAELLVNIK HVL
Sbjct: 61  KTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVL 120

Query: 327 VPEHQLLSPEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVRISRPSETAGRYI 148
           VPEHQ+L+ EEKKTLLERYTVKETQLPRIQV+DPIARY+GLKRGQVV+I RPSETAGRYI
Sbjct: 121 VPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVVKIIRPSETAGRYI 180

Query: 147 TYRFVV 130
           TYR+VV
Sbjct: 181 TYRYVV 186