BLASTX nr result
ID: Catharanthus23_contig00006881
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00006881
(920 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338749.1| PREDICTED: uncharacterized protein LOC102592... 298 1e-78
ref|XP_004231740.1| PREDICTED: transcription-repair-coupling fac... 298 1e-78
gb|EOY02994.1| DEAD/DEAH box helicase [Theobroma cacao] 296 6e-78
ref|XP_002320427.1| DEAD/DEAH box helicase family protein [Popul... 285 2e-74
ref|XP_002302957.2| hypothetical protein POPTR_0002s23840g [Popu... 282 1e-73
ref|XP_002303013.2| DEAD/DEAH box helicase family protein [Popul... 282 1e-73
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac... 278 2e-72
ref|XP_004493106.1| PREDICTED: transcription-repair-coupling fac... 278 2e-72
ref|XP_006468934.1| PREDICTED: uncharacterized protein LOC102609... 276 1e-71
ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th... 275 2e-71
ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis... 275 2e-71
ref|XP_006300243.1| hypothetical protein CARUB_v10016483mg [Caps... 274 4e-71
ref|XP_006446881.1| hypothetical protein CICLE_v10017439mg [Citr... 273 5e-71
ref|XP_006408576.1| hypothetical protein EUTSA_v10020076mg [Eutr... 273 5e-71
ref|XP_006408575.1| hypothetical protein EUTSA_v10020076mg [Eutr... 273 5e-71
dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila] 273 5e-71
ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arab... 273 9e-71
gb|AAN72199.1| putative helicase [Arabidopsis thaliana] 272 1e-70
gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana] 272 1e-70
ref|XP_004150202.1| PREDICTED: transcription-repair-coupling fac... 270 7e-70
>ref|XP_006338749.1| PREDICTED: uncharacterized protein LOC102592949 [Solanum tuberosum]
Length = 825
Score = 298 bits (764), Expect = 1e-78
Identities = 154/196 (78%), Positives = 166/196 (84%), Gaps = 9/196 (4%)
Frame = -2
Query: 562 RTRDAALDRE-DAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKL 386
R R+A ++E DAIS+L+E IRREH R+ P MDS EADKYIQ VKEQQQRGLQKL
Sbjct: 58 RLRNARQEQERDAISLLNERIRREHAKRDHSPLRPAMDSEEADKYIQLVKEQQQRGLQKL 117
Query: 385 KGDASRDGV--------FSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEY 230
K D +R G FSYKVDPYTLRSGDYVVH+KVGIGRFV IKFDVPKDS EPIEY
Sbjct: 118 KSDRARQGAPHDAAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEY 177
Query: 229 VFIEYADGMAKLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMV 50
VFIEYADGMAKLPVKQASR+LYRYNLPNETK+PRTLSKLSD SAWERRR+KGKVAVQKMV
Sbjct: 178 VFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRMKGKVAVQKMV 237
Query: 49 VDLMELYLHRLKQRRP 2
VDLMELYLHRLKQ+RP
Sbjct: 238 VDLMELYLHRLKQKRP 253
>ref|XP_004231740.1| PREDICTED: transcription-repair-coupling factor-like [Solanum
lycopersicum]
Length = 826
Score = 298 bits (764), Expect = 1e-78
Identities = 154/196 (78%), Positives = 166/196 (84%), Gaps = 9/196 (4%)
Frame = -2
Query: 562 RTRDAALDRE-DAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKL 386
R R+A ++E DAIS+L+E IRREH R+ P MDS EADKYIQ VKEQQQRGLQKL
Sbjct: 59 RLRNARQEQERDAISLLNERIRREHAKRDHSPLRPAMDSEEADKYIQLVKEQQQRGLQKL 118
Query: 385 KGDASRDGV--------FSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEY 230
K D +R G FSYKVDPYTLRSGDYVVH+KVGIGRFV IKFDVPKDS EPIEY
Sbjct: 119 KSDRARQGAPHDAAQPTFSYKVDPYTLRSGDYVVHRKVGIGRFVGIKFDVPKDSKEPIEY 178
Query: 229 VFIEYADGMAKLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMV 50
VFIEYADGMAKLPVKQASR+LYRYNLPNETK+PRTLSKLSD SAWERRR+KGKVAVQKMV
Sbjct: 179 VFIEYADGMAKLPVKQASRLLYRYNLPNETKRPRTLSKLSDTSAWERRRMKGKVAVQKMV 238
Query: 49 VDLMELYLHRLKQRRP 2
VDLMELYLHRLKQ+RP
Sbjct: 239 VDLMELYLHRLKQKRP 254
>gb|EOY02994.1| DEAD/DEAH box helicase [Theobroma cacao]
Length = 1251
Score = 296 bits (759), Expect = 6e-78
Identities = 158/206 (76%), Positives = 172/206 (83%), Gaps = 2/206 (0%)
Frame = -2
Query: 616 GGISYGSKTATNLSQQVLRTRDAALDREDAISMLHEMIRREHGNRESPPRPSVMDSREAD 437
GG+S S L+ + R+ DAIS+L+E IRREHG RE+ RP VMDS+EAD
Sbjct: 63 GGVSISSLDTHKLAPK----REKVELETDAISILNERIRREHGKREAT-RP-VMDSQEAD 116
Query: 436 KYIQKVKEQQQRGLQKLKGDASRD--GVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFD 263
KYIQ VKEQQQRGLQKLKGD R GVFSYKVDPYTLRSGDYVVHKKVG+GRFV IKFD
Sbjct: 117 KYIQLVKEQQQRGLQKLKGDRERKEGGVFSYKVDPYTLRSGDYVVHKKVGVGRFVGIKFD 176
Query: 262 VPKDSSEPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRR 83
VPK S+EPIEY FIEYADGMAKLPVKQA+RMLYRYNLPNE+KKPRTLSKLSD S WERR+
Sbjct: 177 VPKGSTEPIEYAFIEYADGMAKLPVKQAARMLYRYNLPNESKKPRTLSKLSDTSVWERRK 236
Query: 82 IKGKVAVQKMVVDLMELYLHRLKQRR 5
IKGKVA+QKMVVDLMELYLHRLKQRR
Sbjct: 237 IKGKVAIQKMVVDLMELYLHRLKQRR 262
>ref|XP_002320427.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|222861200|gb|EEE98742.1| DEAD/DEAH box helicase
family protein [Populus trichocarpa]
Length = 817
Score = 285 bits (728), Expect = 2e-74
Identities = 148/201 (73%), Positives = 162/201 (80%), Gaps = 2/201 (0%)
Frame = -2
Query: 598 SKTATNLSQQVLRTRDAALDREDAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKV 419
++TA S + + +D IS+L+E IRR+H + RP +MDS EAD+YIQ V
Sbjct: 46 TQTAVPFSSRTATPKYKIETEQDPISILNERIRRQHHGKREGSRP-IMDSEEADQYIQMV 104
Query: 418 KEQQQRGLQKLKGD--ASRDGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSS 245
KEQQQRGLQKLKGD A VFSYKVDPYTLRSGDYVVHKKVGIGRF IKFDVPK SS
Sbjct: 105 KEQQQRGLQKLKGDRVAKEGDVFSYKVDPYTLRSGDYVVHKKVGIGRFFGIKFDVPKGSS 164
Query: 244 EPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVA 65
E IEYVFIEYADGMAKLPV QASRMLYRYNLPNETK+PRTLSKLSD AWERR+ KGKVA
Sbjct: 165 EAIEYVFIEYADGMAKLPVMQASRMLYRYNLPNETKRPRTLSKLSDTGAWERRKTKGKVA 224
Query: 64 VQKMVVDLMELYLHRLKQRRP 2
+QKMVVDLMELYLHRLKQRRP
Sbjct: 225 IQKMVVDLMELYLHRLKQRRP 245
>ref|XP_002302957.2| hypothetical protein POPTR_0002s23840g [Populus trichocarpa]
gi|550345698|gb|EEE82230.2| hypothetical protein
POPTR_0002s23840g [Populus trichocarpa]
Length = 838
Score = 282 bits (722), Expect = 1e-73
Identities = 148/202 (73%), Positives = 162/202 (80%), Gaps = 3/202 (1%)
Frame = -2
Query: 598 SKTATNLSQQVLRTRDAALDREDAISMLHEMIRREH-GNRESPPRPSVMDSREADKYIQK 422
++TA S + + +D IS+L+E IRR+H G RE +MDS EAD+YIQ
Sbjct: 46 TQTALPFSSRTTTPKYKIESEQDPISILNERIRRQHHGKREGSNSKPIMDSEEADQYIQM 105
Query: 421 VKEQQQRGLQKLKGD--ASRDGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDS 248
VKEQQQRGLQKLKGD A VFSYKVDPYTL SGDYVVHKKVGIGRFV IKFD+ K S
Sbjct: 106 VKEQQQRGLQKLKGDRVAKEGDVFSYKVDPYTLSSGDYVVHKKVGIGRFVGIKFDMSKGS 165
Query: 247 SEPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKV 68
SE IEYVFIEYADGMAKLPVKQASRMLYRYNLPN+TKKPRTLSKLSD AWERR+ KGKV
Sbjct: 166 SEAIEYVFIEYADGMAKLPVKQASRMLYRYNLPNDTKKPRTLSKLSDNGAWERRKTKGKV 225
Query: 67 AVQKMVVDLMELYLHRLKQRRP 2
A+QKMVVDLMELYLHRLKQRRP
Sbjct: 226 AIQKMVVDLMELYLHRLKQRRP 247
>ref|XP_002303013.2| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|550345697|gb|EEE82286.2| DEAD/DEAH box helicase
family protein [Populus trichocarpa]
Length = 939
Score = 282 bits (722), Expect = 1e-73
Identities = 148/202 (73%), Positives = 162/202 (80%), Gaps = 3/202 (1%)
Frame = -2
Query: 598 SKTATNLSQQVLRTRDAALDREDAISMLHEMIRREH-GNRESPPRPSVMDSREADKYIQK 422
++TA S + + +D IS+L+E IRR+H G RE +MDS EAD+YIQ
Sbjct: 46 TQTALPFSSRTTTPKYKIESEQDPISILNERIRRQHHGKREGSNSKPIMDSEEADQYIQM 105
Query: 421 VKEQQQRGLQKLKGD--ASRDGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDS 248
VKEQQQRGLQKLKGD A VFSYKVDPYTL SGDYVVHKKVGIGRFV IKFD+ K S
Sbjct: 106 VKEQQQRGLQKLKGDRVAKEGDVFSYKVDPYTLSSGDYVVHKKVGIGRFVGIKFDMSKGS 165
Query: 247 SEPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKV 68
SE IEYVFIEYADGMAKLPVKQASRMLYRYNLPN+TKKPRTLSKLSD AWERR+ KGKV
Sbjct: 166 SEAIEYVFIEYADGMAKLPVKQASRMLYRYNLPNDTKKPRTLSKLSDNGAWERRKTKGKV 225
Query: 67 AVQKMVVDLMELYLHRLKQRRP 2
A+QKMVVDLMELYLHRLKQRRP
Sbjct: 226 AIQKMVVDLMELYLHRLKQRRP 247
>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis
vinifera]
Length = 823
Score = 278 bits (712), Expect = 2e-72
Identities = 143/190 (75%), Positives = 160/190 (84%), Gaps = 2/190 (1%)
Frame = -2
Query: 565 LRTRDAALDREDAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKL 386
++ R+ D I++L+E IRRE R+ P V+DS EADKYIQ VKEQQ+RGLQKL
Sbjct: 63 VQRRERMEPESDDITILNERIRREQSKRDVSRAP-VVDSEEADKYIQLVKEQQRRGLQKL 121
Query: 385 KGD--ASRDGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYA 212
KG+ +G FSYKVDPYTLRSGDYVVHKKVGIGRFV IK DVPKDSS PIEYVFIEYA
Sbjct: 122 KGERVGKENGQFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKLDVPKDSSNPIEYVFIEYA 181
Query: 211 DGMAKLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMEL 32
DGMAKLPVKQASRMLYRYNLP+E+K+PRTLSKLSD S WERRRIKG+VA+QKMVVDLMEL
Sbjct: 182 DGMAKLPVKQASRMLYRYNLPSESKRPRTLSKLSDTSIWERRRIKGRVAIQKMVVDLMEL 241
Query: 31 YLHRLKQRRP 2
YLHRLKQ+RP
Sbjct: 242 YLHRLKQKRP 251
>ref|XP_004493106.1| PREDICTED: transcription-repair-coupling factor-like [Cicer
arietinum]
Length = 823
Score = 278 bits (711), Expect = 2e-72
Identities = 143/178 (80%), Positives = 155/178 (87%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 DAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKLKGDAS-RDGVF 356
D IS+L+E IRRE+G RE +VMD+ EADKYIQ VKEQQQRGLQKLKGD +DG F
Sbjct: 76 DPISILNERIRREYGKREVSR--TVMDTEEADKYIQMVKEQQQRGLQKLKGDREGKDGSF 133
Query: 355 SYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMAKLPVKQAS 176
SYKVDPYTLRSGDYVVHKKVGIGRFV IKFDV S EP EYVFIEYADGMAKLPVKQAS
Sbjct: 134 SYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVSMKSVEPTEYVFIEYADGMAKLPVKQAS 193
Query: 175 RMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMELYLHRLKQRRP 2
+MLYRY+LPNE KKPRTLSKL+D SAWE+R+ KGKVA+QKMVVDLMELYLHRLKQRRP
Sbjct: 194 KMLYRYSLPNENKKPRTLSKLNDTSAWEKRKTKGKVAIQKMVVDLMELYLHRLKQRRP 251
>ref|XP_006468934.1| PREDICTED: uncharacterized protein LOC102609921 [Citrus sinensis]
Length = 835
Score = 276 bits (705), Expect = 1e-71
Identities = 151/219 (68%), Positives = 170/219 (77%), Gaps = 15/219 (6%)
Frame = -2
Query: 613 GISYGSKTATNLSQQVLRTRDAALDREDAISMLHEMIRREHGNRESPPRPSVMDSREADK 434
G+S S T+ +Q+ R+ + D IS+L+E IRR+ G RE+ RP VMDS EADK
Sbjct: 51 GLSLSSPTSKKPTQR----REKNENETDDISILNERIRRDFGKREAT-RP-VMDSEEADK 104
Query: 433 YIQKVKEQQQRGLQKLKGDASRDGV---------------FSYKVDPYTLRSGDYVVHKK 299
YIQ VKEQQQ+GLQKLKG S G FSYKVDPY+LRSGDYVVHKK
Sbjct: 105 YIQLVKEQQQKGLQKLKGKKSGGGGAGAGAGDSGYNGAGGFSYKVDPYSLRSGDYVVHKK 164
Query: 298 VGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKKPRTLS 119
VGIG+FV IKFDV KDS+ PIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETK+PRTLS
Sbjct: 165 VGIGKFVGIKFDVQKDSTVPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKRPRTLS 224
Query: 118 KLSDPSAWERRRIKGKVAVQKMVVDLMELYLHRLKQRRP 2
KLSD +AWERR+ KGKVA+QKMVVDLMELYLHRLKQ+RP
Sbjct: 225 KLSDTTAWERRKTKGKVAIQKMVVDLMELYLHRLKQKRP 263
>ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box
helicase [Arabidopsis thaliana]
Length = 823
Score = 275 bits (703), Expect = 2e-71
Identities = 141/185 (76%), Positives = 160/185 (86%), Gaps = 5/185 (2%)
Frame = -2
Query: 544 LDREDAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKLKG----- 380
L D+IS+L+E IRR+ G RE+ RP+ MDS EA+KYI VKEQQ+RGLQKLKG
Sbjct: 68 LAESDSISLLNERIRRDLGKRETA-RPA-MDSEEAEKYIHMVKEQQERGLQKLKGIRQGT 125
Query: 379 DASRDGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMA 200
A+ DG FSYKVDPY+L SGDYVVHKKVGIGRFV IKFDVPKDSSEP+EYVFIEYADGMA
Sbjct: 126 KAAGDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMA 185
Query: 199 KLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMELYLHR 20
KLP+KQASR+LYRYNLPNETK+PRTLS+LSD S WERR+ KGKVA+QKMVVDLMELYLHR
Sbjct: 186 KLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYLHR 245
Query: 19 LKQRR 5
L+Q+R
Sbjct: 246 LRQKR 250
>ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
gi|6513947|gb|AAF14851.1|AC011664_33 putative helicase
[Arabidopsis thaliana] gi|332640234|gb|AEE73755.1|
putative DEAD/DEAH box helicase [Arabidopsis thaliana]
Length = 822
Score = 275 bits (703), Expect = 2e-71
Identities = 141/185 (76%), Positives = 160/185 (86%), Gaps = 5/185 (2%)
Frame = -2
Query: 544 LDREDAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKLKG----- 380
L D+IS+L+E IRR+ G RE+ RP+ MDS EA+KYI VKEQQ+RGLQKLKG
Sbjct: 67 LAESDSISLLNERIRRDLGKRETA-RPA-MDSEEAEKYIHMVKEQQERGLQKLKGIRQGT 124
Query: 379 DASRDGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMA 200
A+ DG FSYKVDPY+L SGDYVVHKKVGIGRFV IKFDVPKDSSEP+EYVFIEYADGMA
Sbjct: 125 KAAGDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMA 184
Query: 199 KLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMELYLHR 20
KLP+KQASR+LYRYNLPNETK+PRTLS+LSD S WERR+ KGKVA+QKMVVDLMELYLHR
Sbjct: 185 KLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYLHR 244
Query: 19 LKQRR 5
L+Q+R
Sbjct: 245 LRQKR 249
>ref|XP_006300243.1| hypothetical protein CARUB_v10016483mg [Capsella rubella]
gi|482568952|gb|EOA33141.1| hypothetical protein
CARUB_v10016483mg [Capsella rubella]
Length = 828
Score = 274 bits (700), Expect = 4e-71
Identities = 141/185 (76%), Positives = 161/185 (87%), Gaps = 5/185 (2%)
Frame = -2
Query: 544 LDREDAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKLKG----- 380
L D+IS+L+E IRR+ G RE+ RP+ MDS EA+KYIQ VKEQQ+RGLQKLKG
Sbjct: 73 LAESDSISLLNERIRRDLGKRETA-RPA-MDSEEAEKYIQMVKEQQERGLQKLKGFRQGT 130
Query: 379 DASRDGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMA 200
+A+ G FSYKVDPY+L SGDYVVHKKVGIGRFV IKFDVPKDSSEP+EYVFIEYADGMA
Sbjct: 131 EAAGAGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMA 190
Query: 199 KLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMELYLHR 20
KLP+KQASR+LYRYNLPNETK+PRTLS+LSD S WERR+ KGKVA+QKMVVDLMELYLHR
Sbjct: 191 KLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYLHR 250
Query: 19 LKQRR 5
L+Q+R
Sbjct: 251 LRQKR 255
>ref|XP_006446881.1| hypothetical protein CICLE_v10017439mg [Citrus clementina]
gi|557549492|gb|ESR60121.1| hypothetical protein
CICLE_v10017439mg [Citrus clementina]
Length = 835
Score = 273 bits (699), Expect = 5e-71
Identities = 150/219 (68%), Positives = 169/219 (77%), Gaps = 15/219 (6%)
Frame = -2
Query: 613 GISYGSKTATNLSQQVLRTRDAALDREDAISMLHEMIRREHGNRESPPRPSVMDSREADK 434
G+S S T+ +Q+ R+ + D IS+L+E IRR+ G RE+ RP VMDS EADK
Sbjct: 51 GLSLSSPTSKKPTQR----REKNENETDDISILNERIRRDFGKREAT-RP-VMDSEEADK 104
Query: 433 YIQKVKEQQQRGLQKLKGDASRDGV---------------FSYKVDPYTLRSGDYVVHKK 299
YIQ VKEQQQ+GLQKLKG S G FSYKVDPY+LRS DYVVHKK
Sbjct: 105 YIQLVKEQQQKGLQKLKGKKSGGGGAGAGAGDSGYNGAGGFSYKVDPYSLRSSDYVVHKK 164
Query: 298 VGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKKPRTLS 119
VGIG+FV IKFDV KDS+ PIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETK+PRTLS
Sbjct: 165 VGIGKFVGIKFDVQKDSTVPIEYVFIEYADGMAKLPVKQASRMLYRYNLPNETKRPRTLS 224
Query: 118 KLSDPSAWERRRIKGKVAVQKMVVDLMELYLHRLKQRRP 2
KLSD +AWERR+ KGKVA+QKMVVDLMELYLHRLKQ+RP
Sbjct: 225 KLSDTTAWERRKTKGKVAIQKMVVDLMELYLHRLKQKRP 263
>ref|XP_006408576.1| hypothetical protein EUTSA_v10020076mg [Eutrema salsugineum]
gi|567204573|ref|XP_006408577.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109722|gb|ESQ50029.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109723|gb|ESQ50030.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
Length = 823
Score = 273 bits (699), Expect = 5e-71
Identities = 140/181 (77%), Positives = 158/181 (87%), Gaps = 5/181 (2%)
Frame = -2
Query: 532 DAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKLKG-----DASR 368
D+IS+L+E IRR+ G RE+ RP+ MDS EADKYIQ VKEQQ+RGLQKLKG +
Sbjct: 72 DSISLLNERIRRDLGKRETS-RPA-MDSEEADKYIQMVKEQQERGLQKLKGVRQGTETGS 129
Query: 367 DGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMAKLPV 188
G FSYKVDPY+L SGDYVVHKKVGIGRFV IKFDVPKDSSEP+EYVFIEYADGMAKLP+
Sbjct: 130 GGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMAKLPL 189
Query: 187 KQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMELYLHRLKQR 8
KQASR+LYRYNLPNETK+PRTLS+LSD S WERR+ KGKVA+QKMVVDLMELYLHRL+Q+
Sbjct: 190 KQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYLHRLRQK 249
Query: 7 R 5
R
Sbjct: 250 R 250
>ref|XP_006408575.1| hypothetical protein EUTSA_v10020076mg [Eutrema salsugineum]
gi|557109721|gb|ESQ50028.1| hypothetical protein
EUTSA_v10020076mg [Eutrema salsugineum]
Length = 801
Score = 273 bits (699), Expect = 5e-71
Identities = 140/181 (77%), Positives = 158/181 (87%), Gaps = 5/181 (2%)
Frame = -2
Query: 532 DAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKLKG-----DASR 368
D+IS+L+E IRR+ G RE+ RP+ MDS EADKYIQ VKEQQ+RGLQKLKG +
Sbjct: 72 DSISLLNERIRRDLGKRETS-RPA-MDSEEADKYIQMVKEQQERGLQKLKGVRQGTETGS 129
Query: 367 DGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMAKLPV 188
G FSYKVDPY+L SGDYVVHKKVGIGRFV IKFDVPKDSSEP+EYVFIEYADGMAKLP+
Sbjct: 130 GGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMAKLPL 189
Query: 187 KQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMELYLHRLKQR 8
KQASR+LYRYNLPNETK+PRTLS+LSD S WERR+ KGKVA+QKMVVDLMELYLHRL+Q+
Sbjct: 190 KQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYLHRLRQK 249
Query: 7 R 5
R
Sbjct: 250 R 250
>dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]
Length = 823
Score = 273 bits (699), Expect = 5e-71
Identities = 140/181 (77%), Positives = 158/181 (87%), Gaps = 5/181 (2%)
Frame = -2
Query: 532 DAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKLKG-----DASR 368
D+IS+L+E IRR+ G RE+ RP+ MDS EADKYIQ VKEQQ+RGLQKLKG +
Sbjct: 72 DSISLLNERIRRDLGKRETS-RPA-MDSEEADKYIQMVKEQQERGLQKLKGVRQGTETGS 129
Query: 367 DGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMAKLPV 188
G FSYKVDPY+L SGDYVVHKKVGIGRFV IKFDVPKDSSEP+EYVFIEYADGMAKLP+
Sbjct: 130 GGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMAKLPL 189
Query: 187 KQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMELYLHRLKQR 8
KQASR+LYRYNLPNETK+PRTLS+LSD S WERR+ KGKVA+QKMVVDLMELYLHRL+Q+
Sbjct: 190 KQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYLHRLRQK 249
Query: 7 R 5
R
Sbjct: 250 R 250
>ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arabidopsis lyrata subsp.
lyrata] gi|297330086|gb|EFH60505.1| hypothetical protein
ARALYDRAFT_477305 [Arabidopsis lyrata subsp. lyrata]
Length = 823
Score = 273 bits (697), Expect = 9e-71
Identities = 140/185 (75%), Positives = 160/185 (86%), Gaps = 5/185 (2%)
Frame = -2
Query: 544 LDREDAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKLKG----- 380
L D+IS+L+E IRR+ G RE+ RP+ MDS E +KYIQ VKEQQ+RGLQKLKG
Sbjct: 68 LAESDSISLLNERIRRDIGKRETA-RPA-MDSEETEKYIQMVKEQQERGLQKLKGIRQGT 125
Query: 379 DASRDGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMA 200
+A+ G FSYKVDPY+L SGDYVVHKKVGIGRFV IKFDVPKDSSEP+EYVFIEYADGMA
Sbjct: 126 EAAGTGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMA 185
Query: 199 KLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMELYLHR 20
KLP+KQASR+LYRYNLPNETK+PRTLS+LSD S WERR+ KGKVA+QKMVVDLMELYLHR
Sbjct: 186 KLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYLHR 245
Query: 19 LKQRR 5
L+Q+R
Sbjct: 246 LRQKR 250
>gb|AAN72199.1| putative helicase [Arabidopsis thaliana]
Length = 822
Score = 272 bits (696), Expect = 1e-70
Identities = 140/185 (75%), Positives = 159/185 (85%), Gaps = 5/185 (2%)
Frame = -2
Query: 544 LDREDAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKLKG----- 380
L D+IS+L+E IRR+ G RE+ RP+ MDS EA+KYI VKEQQ+RGLQKLKG
Sbjct: 67 LAESDSISLLNERIRRDLGKRETA-RPA-MDSEEAEKYIHMVKEQQERGLQKLKGIRQGT 124
Query: 379 DASRDGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMA 200
A+ DG FSYKVDPY+L SGDYVVHKKVGIGRFV IKFDVPKDSSEP+EYVFIEYADGMA
Sbjct: 125 KAAGDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMA 184
Query: 199 KLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMELYLHR 20
KLP+KQASR+LYRYNLPNETK+PRTLS+LSD S WERR+ KGKVA+QKMVVDLM LYLHR
Sbjct: 185 KLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMGLYLHR 244
Query: 19 LKQRR 5
L+Q+R
Sbjct: 245 LRQKR 249
>gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana]
Length = 823
Score = 272 bits (696), Expect = 1e-70
Identities = 140/185 (75%), Positives = 159/185 (85%), Gaps = 5/185 (2%)
Frame = -2
Query: 544 LDREDAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKLKG----- 380
L D+IS+L+E IRR+ G RE+ RP+ MDS EA+KYI VKEQQ+RGLQKLKG
Sbjct: 68 LAESDSISLLNERIRRDLGKRETA-RPA-MDSEEAEKYIHMVKEQQERGLQKLKGIRQGT 125
Query: 379 DASRDGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYADGMA 200
A+ DG FSYKVDPY+L SGDYVVHKKVGIGRFV IKFDVPKDSSEP+EYVFIEYADGMA
Sbjct: 126 KAAGDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEYVFIEYADGMA 185
Query: 199 KLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMELYLHR 20
KLP+KQASR+LYRYNLPNETK+PRTLS+LSD S WERR+ KGKVA+QKMVVDLM LYLHR
Sbjct: 186 KLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMGLYLHR 245
Query: 19 LKQRR 5
L+Q+R
Sbjct: 246 LRQKR 250
>ref|XP_004150202.1| PREDICTED: transcription-repair-coupling factor-like [Cucumis
sativus] gi|449515466|ref|XP_004164770.1| PREDICTED:
transcription-repair-coupling factor-like [Cucumis
sativus]
Length = 827
Score = 270 bits (689), Expect = 7e-70
Identities = 141/189 (74%), Positives = 157/189 (83%), Gaps = 3/189 (1%)
Frame = -2
Query: 562 RTRDAALDREDAISMLHEMIRREHGNRESPPRPSVMDSREADKYIQKVKEQQQRGLQKLK 383
R RD D+IS+L+E I R HG R+S + MDS EAD+YIQ VKEQQQRGLQKLK
Sbjct: 69 RRRDQIELERDSISLLNERILRFHGKRDSSR--TAMDSEEADRYIQMVKEQQQRGLQKLK 126
Query: 382 GDASR---DGVFSYKVDPYTLRSGDYVVHKKVGIGRFVDIKFDVPKDSSEPIEYVFIEYA 212
GD R DG F+YKVDPYTLRSGDYVVHKKVGIGRFV IKFDV K S+E IEYVFIEYA
Sbjct: 127 GDRQRKESDG-FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEAIEYVFIEYA 185
Query: 211 DGMAKLPVKQASRMLYRYNLPNETKKPRTLSKLSDPSAWERRRIKGKVAVQKMVVDLMEL 32
DGMAKLPVKQASRMLYRY+LPNE K+PRTLSKL+D + WE+R+ KGK+A+QKMVVDLMEL
Sbjct: 186 DGMAKLPVKQASRMLYRYSLPNENKRPRTLSKLNDTTTWEKRKTKGKIAIQKMVVDLMEL 245
Query: 31 YLHRLKQRR 5
YLHRLKQRR
Sbjct: 246 YLHRLKQRR 254