BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00006787
         (551 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]   144   1e-32
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   140   2e-31
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop...   134   1e-29
emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]   132   4e-29
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]   126   4e-27
emb|CAN71583.1| hypothetical protein VITISV_043292 [Vitis vinifera]   126   4e-27
gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsi...   125   9e-27
gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]   124   2e-26
gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [...   123   3e-26
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...   122   4e-26
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        122   6e-26
emb|CAN74741.1| hypothetical protein VITISV_025583 [Vitis vinifera]   122   7e-26
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   121   1e-25
gb|ABD96963.1| hypothetical protein [Cleome spinosa]                  121   1e-25
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]         121   1e-25
gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao]   117   2e-24
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   114   2e-23
emb|CAN72864.1| hypothetical protein VITISV_029730 [Vitis vinifera]   114   2e-23
ref|XP_003625577.1| Ubiquitin-protein ligase [Medicago truncatul...   113   3e-23
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ...   113   3e-23

>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score =  144 bits (364), Expect = 1e-32
 Identities = 70/140 (50%), Positives = 104/140 (74%)
 Frame = -1

Query: 542 LTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHSENI 363
           + L L D  LRE  E+  A  +W +LE+LY++ SLSN++YLKE+L+GFKM   +S ++N+
Sbjct: 63  IILALGDKALREFSEETTAKGVWNKLEQLYMQNSLSNRLYLKERLYGFKMQEDRSIADNL 122

Query: 362 DDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNALKSK 183
           DD  KIVLE+ N+G K+ DE+ AV++L SLP  +++ K  +KYGR  LTL +V++AL+SK
Sbjct: 123 DDFAKIVLEMSNIGIKVDDEDKAVLVLKSLPGLYSNFKETMKYGRKTLTLEEVQSALRSK 182

Query: 182 DLDLRKENKSNGENLYVRGR 123
           +L+L+K+  SNGE L +RGR
Sbjct: 183 ELELKKKG-SNGEGLSIRGR 201


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  140 bits (353), Expect = 2e-31
 Identities = 75/183 (40%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
 Frame = -1

Query: 551 HSCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHS 372
           HS + L L D VLRE  +  +A E+W +LE LY+ KSL+N+++ K +L+ FKM+   S  
Sbjct: 60  HSAIILSLGDTVLREXAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPGMSIE 119

Query: 371 ENIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNAL 192
            ++D  NKI+L+L+N+   ISDE+ A++LL SL  S+ ++K AI YGRD LT  +V++ L
Sbjct: 120 XHLDHFNKIILDLENIDITISDEDKAILLLTSLDASYTNMKDAIMYGRDSLTFDEVQSIL 179

Query: 191 KSKDLDLRKENK-SNGENLYVRGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGKEGHMK 15
            +++L  ++E+K  +GE L +RGR ++RE                   KCF C KEGH K
Sbjct: 180 HARELQKQEESKEESGEGLNIRGRSEKRE--KKGKNSKSRSKSKTKKFKCFICHKEGHFK 237

Query: 14  NKC 6
             C
Sbjct: 238 KDC 240


>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1137

 Score =  134 bits (337), Expect = 1e-29
 Identities = 67/181 (37%), Positives = 110/181 (60%), Gaps = 3/181 (1%)
 Frame = -1

Query: 536 LHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHSENIDD 357
           +++ D VLR I+    A E W  L+KLYL KSL N++YL+ +++ ++M  SK+  EN+D+
Sbjct: 50  INVGDKVLRNIENSKTAAEAWATLDKLYLVKSLPNRVYLQLKVYNYRMQDSKTLEENVDE 109

Query: 356 LNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNALKSKDL 177
             K++ +L N+  ++ DE  A+++L++LP+S++ +K  +KYGR+ + L DV +A KSK+L
Sbjct: 110 FQKMISDLNNLQIQVPDEVQAILILSALPDSYDMLKETLKYGREGIKLDDVISAAKSKEL 169

Query: 176 DLRKENKSN---GENLYVRGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGKEGHMKNKC 6
           +LR  +  +   GE LYVRG+   R                     C+ CGKEGH K +C
Sbjct: 170 ELRDSSGGSRPVGEGLYVRGKSQAR--------GSDGPKSTEGKKVCWICGKEGHFKRQC 221

Query: 5   F 3
           +
Sbjct: 222 Y 222


>emb|CAN70013.1| hypothetical protein VITISV_017116 [Vitis vinifera]
          Length = 947

 Score =  132 bits (333), Expect = 4e-29
 Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 1/182 (0%)
 Frame = -1

Query: 548 SCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHSE 369
           S + L L D +LRE+ +     E+W +LE LY+ KSL+N+++ K +L+ FK++   S  E
Sbjct: 105 SAIILSLGDTMLREVAKAKPTAELWLKLESLYMTKSLANRLHKKIKLYTFKITPGMSIEE 164

Query: 368 NIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNALK 189
           + D  NKI+L+L+N+   +S+E+ A++LL SL  S+ ++K AI YGRD +T  +V++ L 
Sbjct: 165 HFDHFNKIILDLENIDITVSNEDKAILLLTSLDASYTNMKEAIMYGRDSMTFDEVQSILH 224

Query: 188 SKDLDLRKENK-SNGENLYVRGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGKEGHMKN 12
            ++L  ++E+K  +GE L +RGR D+RE                   KCF C KEGH K 
Sbjct: 225 PRELQKQEESKDESGEGLNIRGRYDKRE--KKCKNLKAKSKSNTKKFKCFICHKEGHFKK 282

Query: 11  KC 6
            C
Sbjct: 283 DC 284


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score =  126 bits (316), Expect = 4e-27
 Identities = 69/183 (37%), Positives = 110/183 (60%), Gaps = 1/183 (0%)
 Frame = -1

Query: 551 HSCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHS 372
           H  + L L D  LRE+ +  +A ++  +LE LY+ KSL+N+++   +L+ FKM+ S S  
Sbjct: 60  HGAIILSLGDTXLREVAKAKSAAKLLLKLESLYMTKSLANRLHKXIKLYTFKMTPSMSIE 119

Query: 371 ENIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNAL 192
           E++D  NKI+L+L+N+   +S+E+ A++LL SL  S+ ++K AI YGRD LT  +V++ L
Sbjct: 120 EHLDHFNKIILDLKNIDIAVSNEDKAILLLTSLDASYTNMKEAIMYGRDILTFDEVQSIL 179

Query: 191 KSKDLDLRKENKSN-GENLYVRGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGKEGHMK 15
            +++L  ++E+K   GE L +RG+  +RE                   KCF C KEGH K
Sbjct: 180 HARELHKQEESKEELGEGLNIRGKSKKRE-KKKGNNSKSRSKSKTKKFKCFICHKEGHFK 238

Query: 14  NKC 6
             C
Sbjct: 239 KDC 241


>emb|CAN71583.1| hypothetical protein VITISV_043292 [Vitis vinifera]
          Length = 531

 Score =  126 bits (316), Expect = 4e-27
 Identities = 69/173 (39%), Positives = 106/173 (61%), Gaps = 5/173 (2%)
 Frame = -1

Query: 518 VLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHSENIDDLNKIVL 339
           VLR++  +  A  IW +LE++Y+ KSL N+IYLK++ FGFKM   KS  E ID+  K+V+
Sbjct: 15  VLRKVSREILASTIWKKLEEIYMLKSLPNRIYLKQKFFGFKMHEKKSIDEIIDEFTKLVV 74

Query: 338 ELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNALKSKDLDLRKE- 162
           +L+++  KI DE+ AV+LLNSLP+ F+ ++  +KY +D L+L  V +A+ +K +D+R E 
Sbjct: 75  DLESLCVKIEDEDQAVLLLNSLPKVFDQLRDTLKYSKDSLSLEGVVSAIHAKKMDIRVER 134

Query: 161 -NKSNGENLYVRGRVDRR---EXXXXXXXXXXXXXXXXXXXKCFYCGKEGHMK 15
              ++ E L VRGR  +R   +                   KCF+C KEGH +
Sbjct: 135 IGTTSSEGLVVRGRPKKRNNNQKGNHDKSKSKSKSKSKFTRKCFHCHKEGHYR 187


>gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 838

 Score =  125 bits (313), Expect = 9e-27
 Identities = 68/187 (36%), Positives = 115/187 (61%), Gaps = 5/187 (2%)
 Frame = -1

Query: 548 SCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHSE 369
           S + L L ++VLR++ ++  A  +   L+KL++ KSL N+IYLK++L+G+KMS S +  E
Sbjct: 73  STVILSLGNHVLRKVIKEKTAAGMIRVLDKLFMAKSLPNRIYLKQRLYGYKMSDSMTIEE 132

Query: 368 NIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNALK 189
           N++D  K++ +L+NV   + DE+ A++LL SLP+ F+ +K  +KYG+  L L ++  A++
Sbjct: 133 NVNDFFKLISDLENVKVSVPDEDQAIVLLMSLPKQFDQLKDTLKYGKTTLALDEITGAIR 192

Query: 188 SKDLDL---RKENKSNGENLYV--RGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGKEG 24
           SK L+L    K  K++ + L+V  RGR ++R+                    C+ CGKEG
Sbjct: 193 SKVLELGASGKMLKNSSDALFVQDRGRSEKRD-KSSERNKSQSRSKSREKKVCWVCGKEG 251

Query: 23  HMKNKCF 3
           H K +C+
Sbjct: 252 HFKKQCY 258


>gb|EOY09126.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
          Length = 277

 Score =  124 bits (311), Expect = 2e-26
 Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 5/187 (2%)
 Frame = -1

Query: 551 HSCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHS 372
           HS + L L+D VLRE+ ++ +A  +W +LE +Y+ KSL+N++Y+K++L+  KMS   S +
Sbjct: 62  HSAILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVN 121

Query: 371 ENIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNAL 192
            +ID+ N+++L+L+N+  KI DE++A+ILL  LP S+ +    + YGRD LT  DV+  L
Sbjct: 122 THIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRAYL 181

Query: 191 KSKDL-----DLRKENKSNGENLYVRGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGKE 27
            SK+L      +R EN++ G  +  RGR   +                     C+ CG++
Sbjct: 182 NSKELKKKVGGIRNENQAEG-LVVNRGRGKEK-------GLDKKGKSRAKGKTCWNCGQK 233

Query: 26  GHMKNKC 6
           GH +  C
Sbjct: 234 GHFRQDC 240


>gb|EOY22705.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
          Length = 1029

 Score =  123 bits (309), Expect = 3e-26
 Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 5/187 (2%)
 Frame = -1

Query: 551 HSCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHS 372
           HS + L L+D VLRE+ ++ +A  +W +LE +Y+ KSL+N++Y+K++L+  KMS   S +
Sbjct: 184 HSVILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVN 243

Query: 371 ENIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNAL 192
            +ID+ N+++L+L+N+  KI DE++A+ILL  LP S+ +    + YGRD LT  DV+ +L
Sbjct: 244 THIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRASL 303

Query: 191 KSKDL-----DLRKENKSNGENLYVRGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGKE 27
             K+L      +R EN++ G  +  RGR   +                     C+ CG++
Sbjct: 304 NFKELKKKVGGIRNENQAEG-LVVNRGRGKEK-------GLDRKGKSRAKGKTCWNCGQK 355

Query: 26  GHMKNKC 6
           GH +  C
Sbjct: 356 GHFRQDC 362


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  122 bits (307), Expect = 4e-26
 Identities = 67/186 (36%), Positives = 111/186 (59%), Gaps = 5/186 (2%)
 Frame = -1

Query: 548 SCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHSE 369
           S + L +TD VLR+I +++ A  +   L+KLY+ K+L N+IY K++L+ FKMS + S   
Sbjct: 76  SAIVLSVTDRVLRKIKKESTAAAMLLALDKLYMSKALPNRIYPKQKLYSFKMSENLSVEG 135

Query: 368 NIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKY--GRDDLTLADVKNA 195
           NID+  +I+ +L+N+   ISDE+ A++LL +LP++F+ +K  +KY  G+  LTL +V  A
Sbjct: 136 NIDEFLQIITDLENMNVIISDEDQAILLLTALPKAFDQLKDTLKYSSGKSILTLDEVAAA 195

Query: 194 LKSKDLDL---RKENKSNGENLYVRGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGKEG 24
           + SK+L+L   +K  K   E LYV+ + + +                     C+ CG+EG
Sbjct: 196 IYSKELELGSVKKSIKVQAEGLYVKDKNENKGKGEQKGKGKGKKGKSKKKPGCWTCGEEG 255

Query: 23  HMKNKC 6
           H ++ C
Sbjct: 256 HFRSSC 261


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  122 bits (306), Expect = 6e-26
 Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
 Frame = -1

Query: 551 HSCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHS 372
           HS L L L D++LREI E+  A  IW ++E L ++KSL+++++LK++L+ F M    +  
Sbjct: 62  HSTLILSLGDSILREISEEKTALGIWNKVETLCMKKSLAHRLFLKKRLYTFSMREGVTIQ 121

Query: 371 ENIDDLNKIVLELQNV-GEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNA 195
           ++ID  NKI+L+L+ V   KI DE+ A  LL+SLP+S+      + YGR  LTL DVK +
Sbjct: 122 DHIDTFNKIILDLEGVENVKICDEDKAFFLLSSLPKSYEGFVDTMLYGRTTLTLEDVKAS 181

Query: 194 LKSKDLDLRKE-NKSNGENLYVRGRVDR----REXXXXXXXXXXXXXXXXXXXKCFYCGK 30
           L SK++    E   SNGE L  R    +    +                    KCFYC K
Sbjct: 182 LSSKEIQKNCELETSNGEGLMARTEKKKDQKNKNQGKGHGKNQETADKKKKKRKCFYCRK 241

Query: 29  EGHMKNKCF 3
           EGH    CF
Sbjct: 242 EGHYIRDCF 250


>emb|CAN74741.1| hypothetical protein VITISV_025583 [Vitis vinifera]
          Length = 253

 Score =  122 bits (305), Expect = 7e-26
 Identities = 60/149 (40%), Positives = 101/149 (67%), Gaps = 1/149 (0%)
 Frame = -1

Query: 551 HSCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHS 372
           HS + L L D +LRE+ +  +A E+W +LE LY+ KSL N+++ K +L+ FKM    S  
Sbjct: 60  HSAIVLSLGDTLLREVAKAKSAAELWLKLESLYMTKSLGNRLHKKIKLYTFKMIPGMSIE 119

Query: 371 ENIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNAL 192
           E++D  NKI+L+L+N+   + DE+ A++L  SL  S+ ++K AI Y RD++T  +V++ L
Sbjct: 120 EHLDHFNKIILDLENIDIVVLDEDKAIMLPTSLDASYTNMKEAIMYERDNMTFDEVQSIL 179

Query: 191 KSKDLDLRKENK-SNGENLYVRGRVDRRE 108
            +++L  ++E+K  +GE L +RGR ++RE
Sbjct: 180 HARELQKQEESKEKSGEGLNIRGRYEKRE 208


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  121 bits (303), Expect = 1e-25
 Identities = 64/185 (34%), Positives = 109/185 (58%), Gaps = 3/185 (1%)
 Frame = -1

Query: 548 SCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHSE 369
           S + L L +NVLR++ ++  A  +   L++L++ KSL N+IYLK++L+G+KMS + +  E
Sbjct: 81  STIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMAKSLPNRIYLKQRLYGYKMSENMTMEE 140

Query: 368 NIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNALK 189
           N++D  K++ +L+NV   + DE+ A++LL SLP  F+ +K  +KY +  L L ++ +A++
Sbjct: 141 NVNDFFKLISDLENVKVVVPDEDQAIVLLMSLPRQFDQLKETLKYCKTTLHLEEITSAIR 200

Query: 188 SKDLDL---RKENKSNGENLYVRGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGKEGHM 18
           SK L+L    K  K+N + L+V+ R                         C+ CGKEGH 
Sbjct: 201 SKILELGASGKLLKNNSDGLFVQDRGRSETRGKGPNKNKSRSKSKGAGKTCWICGKEGHF 260

Query: 17  KNKCF 3
           K +C+
Sbjct: 261 KKQCY 265


>gb|ABD96963.1| hypothetical protein [Cleome spinosa]
          Length = 408

 Score =  121 bits (303), Expect = 1e-25
 Identities = 60/182 (32%), Positives = 107/182 (58%), Gaps = 3/182 (1%)
 Frame = -1

Query: 542 LTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHSENI 363
           + L L D VLR++  +  AF IW +LE+L++ +SL N++YL +++ GF+M  S++  EN+
Sbjct: 102 IVLALADQVLRKVISERTAFGIWRKLERLHIEQSLPNRMYLMQRVSGFRMDSSRTIEENL 161

Query: 362 DDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNALKSK 183
           D   K++ +L ++  K+ +E  AV LLNSLP ++  ++  +KY R  +++ +VK A + K
Sbjct: 162 DIFQKLLSDLHSLNVKVEEEYQAVYLLNSLPPAYEQLREVLKYSRATISVEEVKAAARMK 221

Query: 182 DLDLRKE---NKSNGENLYVRGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGKEGHMKN 12
           +L+L  +    +  GE L V+G+ ++                     +C+YCGK+GH K 
Sbjct: 222 ELELLAQGTLTRGTGEGLVVKGKPEK---------SGGGKKKAKDQVECWYCGKKGHYKK 272

Query: 11  KC 6
           +C
Sbjct: 273 EC 274


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score =  121 bits (303), Expect = 1e-25
 Identities = 65/186 (34%), Positives = 111/186 (59%), Gaps = 5/186 (2%)
 Frame = -1

Query: 548 SCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHSE 369
           S + L ++D VLR+I ++ +A  +   L++LY+ K+L N+IYLK++L+ FKMS + S   
Sbjct: 76  STIVLSVSDRVLRKIKKETSAAAMLEALDRLYMSKALPNRIYLKQKLYSFKMSENLSIEG 135

Query: 368 NIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKY--GRDDLTLADVKNA 195
           NID+   IV +L+N+   +SDE+ A++LL SLP+ F+ +K  +KY  G+  L+L +V  A
Sbjct: 136 NIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQLKDTLKYSSGKTVLSLDEVAAA 195

Query: 194 LKSKDLD---LRKENKSNGENLYVRGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGKEG 24
           + S++L+   ++K  K   E LYV+ + + R                     C+ CG++G
Sbjct: 196 IYSRELEFGSVKKSIKGQAEGLYVKDKAENRGRSEQKDKGKGKRSKSKSKRGCWICGEDG 255

Query: 23  HMKNKC 6
           H+K+ C
Sbjct: 256 HLKSTC 261


>gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao]
          Length = 698

 Score =  117 bits (292), Expect = 2e-24
 Identities = 52/125 (41%), Positives = 88/125 (70%)
 Frame = -1

Query: 551 HSCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHS 372
           HS + L L+D V+RE+ ++ +A  +W +L+ +Y+ KSL N++Y+K++L+  KMS   S +
Sbjct: 62  HSAILLALSDEVIREVTDEESAIAVWLKLKSIYMTKSLMNRLYIKQRLYTLKMSEGTSVN 121

Query: 371 ENIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNAL 192
            +ID+ N+++L+L+N+  KI DE++A+ILL SLP S+ +    + YGRD  T  DV+ +L
Sbjct: 122 THIDEFNRVILDLKNIDVKIEDEDLALILLCSLPPSYENFMDTMLYGRDTFTFEDVRASL 181

Query: 191 KSKDL 177
            SK+L
Sbjct: 182 NSKEL 186


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  114 bits (285), Expect = 2e-23
 Identities = 65/189 (34%), Positives = 105/189 (55%), Gaps = 7/189 (3%)
 Frame = -1

Query: 551 HSCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHS 372
           HS + L L D+V+ E+ ++  A  +W +LE LY+ KSL+NK+ LK++LFG +M+      
Sbjct: 57  HSTIMLCLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLR 116

Query: 371 ENIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNAL 192
           E+++ LN ++LEL+N+  KI DE+ A+ILL SLP SF +   +   G+D ++L +V++AL
Sbjct: 117 EHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSAL 176

Query: 191 KSKDLDLRKENKSNG-------ENLYVRGRVDRREXXXXXXXXXXXXXXXXXXXKCFYCG 33
            S++L     +K+NG         L+   R  R+                     C YC 
Sbjct: 177 HSREL----RHKANGTSTDIQPSGLFTSSRKGRKN---GGKKNKPMSKGAKPDDVCNYCK 229

Query: 32  KEGHMKNKC 6
           ++GH K  C
Sbjct: 230 EKGHWKFDC 238


>emb|CAN72864.1| hypothetical protein VITISV_029730 [Vitis vinifera]
          Length = 319

 Score =  114 bits (285), Expect = 2e-23
 Identities = 53/136 (38%), Positives = 93/136 (68%)
 Frame = -1

Query: 551 HSCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHS 372
           H+ + L L D +LRE+ +  +  E+W +LE LY+ KSL+N+++ K +L+ FKM+ S S  
Sbjct: 41  HNAIILSLGDTMLREVAKAKSTVELWLKLESLYMTKSLANQLHKKVKLYTFKMTSSMSIE 100

Query: 371 ENIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRDDLTLADVKNAL 192
           E++D  NKI+L+L+N+   +S+E+ A++LL SL  S+ ++K AI YG D LT  D+++ L
Sbjct: 101 EHLDHFNKIILDLKNIDIIVSNEDKAIVLLTSLDASYTNLKEAIMYGIDSLTFDDLQSIL 160

Query: 191 KSKDLDLRKENKSNGE 144
            +++L  ++E+K   +
Sbjct: 161 YARELQKQEESKDESD 176


>ref|XP_003625577.1| Ubiquitin-protein ligase [Medicago truncatula]
           gi|355500592|gb|AES81795.1| Ubiquitin-protein ligase
           [Medicago truncatula]
          Length = 1405

 Score =  113 bits (283), Expect = 3e-23
 Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 7/188 (3%)
 Frame = -1

Query: 548 SCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHSE 369
           S + L L D VLRE+ ++  A  IW +LE LY+ KSL+++ +LK+QL+ F+M  SK+  E
Sbjct: 60  SAVVLCLGDKVLREVAKEATAASIWAKLESLYMTKSLAHRQFLKQQLYSFRMVESKAIME 119

Query: 368 NIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKYGRD-DLTLADVKNAL 192
            + + NKI+ +L+N+  ++ DE+ A++LL +LP+SF   K  + YG++  +TL +V+ AL
Sbjct: 120 QLTEFNKILDDLENIEVQLEDEDKAILLLCALPKSFESFKDTMLYGKEGTVTLEEVQAAL 179

Query: 191 KSKDLDLRKE-NKSNGENLYVR-----GRVDRREXXXXXXXXXXXXXXXXXXXKCFYCGK 30
           ++K+L   K+    +GE L V      GR +RR+                   +CF C K
Sbjct: 180 RTKELTKSKDLTHEHGEGLSVTRGNGGGRGNRRK------------SGNKSRFECFNCHK 227

Query: 29  EGHMKNKC 6
            GH K  C
Sbjct: 228 MGHFKKDC 235


>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
           gi|7267743|emb|CAB78169.1| putative retrotransposon
           [Arabidopsis thaliana]
          Length = 1230

 Score =  113 bits (283), Expect = 3e-23
 Identities = 64/188 (34%), Positives = 105/188 (55%), Gaps = 7/188 (3%)
 Frame = -1

Query: 548 SCLTLHLTDNVLREIDEKNNAFEIWTELEKLYLRKSLSNKIYLKEQLFGFKMSGSKSHSE 369
           S + L ++D VLR+  ++  A  +   L+KLY+ K+L N+IYLK++L+ +KM  + S   
Sbjct: 74  STIVLSVSDQVLRKSKKEKTAPSMLEALDKLYMSKALPNRIYLKQKLYSYKMQENLSVEG 133

Query: 368 NIDDLNKIVLELQNVGEKISDENVAVILLNSLPESFNDVKSAIKY--GRDDLTLADVKNA 195
           NID+  +++ +L+N    +SDE+ A++LL SLP+ F+ +K  +KY  GR  L++ +V  A
Sbjct: 134 NIDEFLRLIADLENTNVLVSDEDQAILLLMSLPKQFDQLKDTLKYGSGRTTLSVDEVVAA 193

Query: 194 LKSKDLDLRKENKS---NGENLYVRGRVDRR--EXXXXXXXXXXXXXXXXXXXKCFYCGK 30
           + SK+L+L    KS     E LYV+ + + R                       C+ CG+
Sbjct: 194 IYSKELELGSNKKSIRGQAEGLYVKDKPETRGMSEQKEKGNKGRSRSRSKGWKGCWICGE 253

Query: 29  EGHMKNKC 6
           EGH K  C
Sbjct: 254 EGHFKTSC 261