BLASTX nr result

ID: Catharanthus23_contig00006679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00006679
         (3733 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp...  1035   0.0  
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...  1028   0.0  
ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp...  1026   0.0  
emb|CBI34982.3| unnamed protein product [Vitis vinifera]             1003   0.0  
ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   982   0.0  
ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron sp...   974   0.0  
ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp...   972   0.0  
ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp...   972   0.0  
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp...   972   0.0  
ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp...   971   0.0  
gb|EMJ18282.1| hypothetical protein PRUPE_ppa000515mg [Prunus pe...   971   0.0  
gb|EOY02282.1| CRM family member 2, putative isoform 2 [Theobrom...   968   0.0  
ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp...   967   0.0  
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   967   0.0  
ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Caps...   962   0.0  
ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|2...   962   0.0  
ref|XP_006408495.1| hypothetical protein EUTSA_v10019986mg [Eutr...   956   0.0  
gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]       955   0.0  
ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citr...   952   0.0  
gb|EOY02281.1| CRM family member 2, putative isoform 1 [Theobrom...   948   0.0  

>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1049

 Score = 1035 bits (2677), Expect = 0.0
 Identities = 585/1048 (55%), Positives = 717/1048 (68%), Gaps = 27/1048 (2%)
 Frame = -1

Query: 3580 TKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQSAIQRIAEK 3401
            +KTL NP    + F   P+ S K     PR+ L     A SPD  T  LP+SAI+RIA+K
Sbjct: 14   SKTLLNPSPSHSLFSTTPSFSLK--PFFPRNTL--PVFATSPD--TEALPESAIRRIADK 67

Query: 3400 LRSLGYVEDEKDKDS---STTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPENPV 3230
            LRSLG+VE+ K++++   + ++N   +SPG+IFVPLPTQLPKYRVGHT D+SWSTPENPV
Sbjct: 68   LRSLGFVEEPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHTLDTSWSTPENPV 127

Query: 3229 PEPGSGNAIQRYHELRNVVIKEKIQERSKKKEY----VPTLAELKLPQEELKRLRTXXXX 3062
            P+PG GN+IQ++HELR+  +KEK +ER K KEY     P+LAEL LP EEL+RLRT    
Sbjct: 128  PQPGLGNSIQKFHELRDEFLKEKEKERLKNKEYKKERAPSLAELTLPAEELRRLRTVGIA 187

Query: 3061 XXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWR 2882
                       ITEGIVNGIHERWR+ ELVKI CEDICR+NM+RTH+LLE+KTGGLVIWR
Sbjct: 188  LRKKLKIGKAGITEGIVNGIHERWRRMELVKITCEDICRLNMKRTHELLEKKTGGLVIWR 247

Query: 2881 SGSNIVLYRGADYKYPYFLSEECSRNVASEEVP------HNHGTTAXXXXXXXXXXXXXX 2720
            SGSNI+LYRGADYKYPYF       N A +  P        H T +              
Sbjct: 248  SGSNIILYRGADYKYPYFSEISFENNSAQDATPDLFMGTEEHMTNSSGTDVVKPDASD-- 305

Query: 2719 XNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGDLL 2540
              + S P +IQGVGSP+RVRF+LPGEA+  EEAD LL GLGPRFTDWWG EPLP+D DLL
Sbjct: 306  --RKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDADLL 363

Query: 2539 PAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIKLW 2360
            PA+VPG++RPFRLLPYGV PKLTNDEMT L+RLGRPLPCHF LGRNRKLQGLAAAI+KLW
Sbjct: 364  PAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIVKLW 423

Query: 2359 EKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSAIE 2180
            EKCEIAK+A+KRGVQNTNSELMAEELK LTGG LLSRDREFIV YRGKDFLP+AVSSAIE
Sbjct: 424  EKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAIE 483

Query: 2179 ERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSEERELKSTEA 2000
            ERRK ++  + K    N       E +Q T+G V +    R++ +  +  E+++L S EA
Sbjct: 484  ERRK-QVFEEEKRNGFNSSVANAKERKQSTTGSVSDDGHARRNNQKGV-QEKKKLTSMEA 541

Query: 1999 AVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTMKPF 1820
            A+ RT+                    E +E+ QQ D+DKEGITE+E++MLRKIGL MKPF
Sbjct: 542  AIKRTADKLTTALEKKAEAENLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKPF 601

Query: 1819 LLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVERVS 1640
            LLLGRRGVF GTVENMHLHWKYRELVK+ITG +++EEVH +AR LEAESGGILVAVE V+
Sbjct: 602  LLLGRRGVFDGTVENMHLHWKYRELVKVITGRKTIEEVHQIARMLEAESGGILVAVELVN 661

Query: 1639 KGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDLKLQ 1460
            KG+AIIVYRGKNY RPASLRPQ+LL+KR+AMKRSIEAQRR+SLK+HVLKL+QNI+ L+ +
Sbjct: 662  KGHAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSR 721

Query: 1459 LGKHEDGGNMDLAKASEHQL----------GNEQEMHEMQSTEGSA-LVVTTESCVQSPV 1313
            L K+E+  ++      + Q+          G   +      TE S      T+   Q  +
Sbjct: 722  LAKNEEMVHIQSPDIVDRQVPVTGISDAAGGTNYQSSSASPTEDSGDAAEDTDPSSQKEL 781

Query: 1312 GSECNREVTGSHETDSASP--KLNDASQSSLDFPSPDFQTDITVYESAHLPKLDTEEKII 1139
             S+ +     S +     P  +     ++  D   P+ Q+  ++ ES  +  ++ ++K  
Sbjct: 782  SSDSSDTDHNSQQEFPIDPFFQYEGKVEAVGDTIQPEHQSISSIKESKSMFNVNVDQKTF 841

Query: 1138 MNGESRVTSFSSDSSKTCRQTSLSAT-SDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTE 962
                S V+   S SS+   +   S T S  KPR  D K   S   S K    L       
Sbjct: 842  ---GSAVSESVSKSSRGEVKIHFSETRSFNKPREVDDKKEVSQLPSVKPQQALRSTRSRS 898

Query: 961  NGYSSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNV 782
             G  ++ V+L N+ERLLLRKQALKMKK+P+ A+G+SN + GVA+ IK HF++YPLAIVNV
Sbjct: 899  EGMPTRKVQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVNV 958

Query: 781  KGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAG 602
            KGRAKGTSV+EVV KLE+ TGAVLVSQEPSK+ILYRGWG   E  ++ G    NS  S  
Sbjct: 959  KGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPGGERGASNGNDTRNSRNS-- 1016

Query: 601  MESKTRHVISPELISAIRLECGLQSDLD 518
             E K    ISPELISAIRLECGLQS+ D
Sbjct: 1017 REQKELMSISPELISAIRLECGLQSNHD 1044


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score = 1028 bits (2657), Expect = 0.0
 Identities = 583/1047 (55%), Positives = 712/1047 (68%), Gaps = 19/1047 (1%)
 Frame = -1

Query: 3595 FRSPYTKTLFNPFSV-PATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQSAI 3419
            F SP      +P S+ P+TF     + SKF        + R   A +PDA  +TLP++AI
Sbjct: 36   FPSPTPTFTSSPPSISPSTFKTLNPKPSKF--------ILR---ASNPDA--QTLPKTAI 82

Query: 3418 QRIAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPE 3239
            QRIAEKLRSLGYV+ ++ +   +++     S GEIFVPLP QLPK+RVGHT D SWS PE
Sbjct: 83   QRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRVGHTIDQSWSLPE 142

Query: 3238 NPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKLPQEELKRLRTXXXXX 3059
            NPVPEPG+G  I R+HELR  V +EK   R K+ E  PTLAEL LP+EEL+RL+      
Sbjct: 143  NPVPEPGTGGVITRFHELRKEVKREKKLVR-KEDERAPTLAELTLPEEELRRLKGIGIQI 201

Query: 3058 XXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWRS 2879
                      ITEGIVNGIHERWR+ E+VKI CEDIC++NM+RTHD+LERKTGGLVIWRS
Sbjct: 202  RKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVIWRS 261

Query: 2878 GSNIVLYRGADYKYPYFLSEECSRNVASEEVP---------HNHGTTAXXXXXXXXXXXX 2726
            GS I+LYRGA+YKYPYFLS+    N +S +           H+                 
Sbjct: 262  GSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAGP 321

Query: 2725 XXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGD 2546
               NK++   LIQGVG P RVRFQLPGEAQL EEAD LL GLGPRFTDWWGY+PLP+D D
Sbjct: 322  MPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDAD 381

Query: 2545 LLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIK 2366
            LLPAVVPG+RRPFRLLPYG+ PKLTNDEMT+L+RLGRPLPCHFALGRNRKLQGLAA++IK
Sbjct: 382  LLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIK 441

Query: 2365 LWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSA 2186
            LWEKCEIAKIA+KRGVQNTNSE+MAEELK LTGG LLSRDREFIV YRGKDFLP AVSSA
Sbjct: 442  LWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSA 501

Query: 2185 IEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYE-KNRKDQKFELSSEERELKS 2009
            IE RRKY +   ++  D +   +   E E  TS    + +     DQK    S+ R L+S
Sbjct: 502  IEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRS 561

Query: 2008 TEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTM 1829
             EA V RT+                    E  +I QQP++DKEGITE+E+YMLRK+GL M
Sbjct: 562  AEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRM 621

Query: 1828 KPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVE 1649
            KPFLLLGRRG+F GTVENMHLHWKYRELVKII+ GRS+E++H VARTLEAESGGILVAVE
Sbjct: 622  KPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVE 681

Query: 1648 RVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDL 1469
            RVSKGYAII+YRGKNY RPASLRPQ+LLNKR+A+KRS+EAQRRESLK+HVL+L++NID+L
Sbjct: 682  RVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDEL 741

Query: 1468 KLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQSPVGSECNREV 1289
                 KH+    +   + +  QL ++  +H  +   G+ +++     + S  G + +R  
Sbjct: 742  -----KHQLVSRIKDKETNSKQLVDKSRLHLARERYGADVIL-----IHSSDGMDSSR-- 789

Query: 1288 TGSHETDSASPKLNDASQSSLDFPSP-DFQTDITVYESAH---LPKLDTEEKIIMNGESR 1121
                  DS     ND     +DFPS  D  TD    E +    L +++T     MN E  
Sbjct: 790  ------DSLQTSHND---KRIDFPSMCDSDTDEANPEPSSESVLKEIETNVLTDMNEEGE 840

Query: 1120 VTSFSSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTE---NGYS 950
             T+ S D      +TS  A       +N  +TMESS  S K++ +  V    +   N   
Sbjct: 841  CTTCSEDLVSQ-GETSCYAI------VNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMP 893

Query: 949  SKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRA 770
             +A  L N+ERLLLRKQAL+MKKRP+ A+G+SN + GVA+ IK HF+++PLAIVNVKGRA
Sbjct: 894  FRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRA 953

Query: 769  KGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEE-PKSTKGKSKINSSPSAGMES 593
            KGTSVQEV+ KLE+ TGAVLVSQEPSK+ILYRGWG++EE  +S +         SAG E 
Sbjct: 954  KGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWGAREENGRSYRMNRSDARKTSAGREG 1013

Query: 592  KTRHVISPELISAIRLECGLQSDLD*G 512
              R  +SPEL +AIRLECGL+S+ D G
Sbjct: 1014 GPRPTVSPELRAAIRLECGLKSNQDKG 1040


>ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1049

 Score = 1026 bits (2652), Expect = 0.0
 Identities = 588/1060 (55%), Positives = 716/1060 (67%), Gaps = 39/1060 (3%)
 Frame = -1

Query: 3580 TKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQSAIQRIAEK 3401
            +KTL  P    + F   P+ S K     PR  L     A SPD  T  LP+SAI+RIA+K
Sbjct: 14   SKTLLKPSPSHSLFSSTPSLSPK--PFFPRDSL--PVFAASPD--TEALPESAIRRIADK 67

Query: 3400 LRSLGYVEDEKDKDS---STTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPENPV 3230
            LRSLG+VE  K++++   + ++N   +SPG+IFVPLPTQLPKYRVGHT D+SWSTPENPV
Sbjct: 68   LRSLGFVEQPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHTLDTSWSTPENPV 127

Query: 3229 PEPGSGNAIQRYHELRNVVIKEKIQERSKKKEY----VPTLAELKLPQEELKRLRTXXXX 3062
            P+PG G +IQ++HELR+  +KEK +ER K KEY     P+LAEL LP EEL+RLRT    
Sbjct: 128  PQPGLGKSIQKFHELRDEFLKEKDKERLKNKEYKKERAPSLAELTLPAEELRRLRTVGIA 187

Query: 3061 XXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWR 2882
                       ITEGIVNGIHERWR+ ELVKI CEDICR+NM+RTH+LLE+KTGGLVIWR
Sbjct: 188  LRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDICRLNMKRTHELLEKKTGGLVIWR 247

Query: 2881 SGSNIVLYRGADYKYPYFLSEECSRNVASEEVP------HNHGTTAXXXXXXXXXXXXXX 2720
            SGSNI+LYRGADYKYPYF       N A +  P        H T +              
Sbjct: 248  SGSNIILYRGADYKYPYFSENSFENNSAQDANPDLFMGAEEHMTNSSGIDAVKSDASD-- 305

Query: 2719 XNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGDLL 2540
              + S P +IQGVGSP+RVRF+LPGEA+  EEAD LL GLGPRFTDWWG EPLP+D DLL
Sbjct: 306  --RKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLPIDADLL 363

Query: 2539 PAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIKLW 2360
            PA+VPG++RPFRLLPYGV PKLTNDEMT L+RLGRPLPCHF LGRNRKLQGLAAAI+KLW
Sbjct: 364  PAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAAAIVKLW 423

Query: 2359 EKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSAIE 2180
            EKCEIAK+A+KRGVQNTNSELM EELK LTGG LLSRDREFIV YRGKDFLP+AVSSAIE
Sbjct: 424  EKCEIAKVAVKRGVQNTNSELMVEELKWLTGGTLLSRDREFIVFYRGKDFLPSAVSSAIE 483

Query: 2179 ERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVC-EYEKNRKDQKFELSSEERELKSTE 2003
            ERRK ++  + K    N       E +Q T+  V  +   +R +QK     E+++L S E
Sbjct: 484  ERRK-QVFEEEKRNGFNSSVANAKERKQSTTESVSDDGHAHRNNQKG--VQEKKKLTSME 540

Query: 2002 AAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTMKP 1823
            AA+ RT+                    E +E+ QQ D+DKEGITE+E++MLRKIGL MKP
Sbjct: 541  AAIKRTADKLTTALEKKAEAEKLLLELEEDEVPQQSDMDKEGITEEERFMLRKIGLRMKP 600

Query: 1822 FLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVERV 1643
            FLLLGRRGVF GTVENMHLHWKYRELVK+ITG +++EEVH +AR LEAESGGILVAVERV
Sbjct: 601  FLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKNIEEVHQIARMLEAESGGILVAVERV 660

Query: 1642 SKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDLKL 1463
            +KGYAIIVYRGKNY RPASLRPQ+LL+KR+AMKRSIEAQRR+SLK+HVLKL+QNI+ L+ 
Sbjct: 661  NKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQS 720

Query: 1462 QLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQSPVGSECNREVTG 1283
            +L K+E+  ++      + Q+        +     +A     +S V SP+    +     
Sbjct: 721  RLAKNEEISHIQSPDIVDRQV-------PVMGISDAAGGTNYQSIVASPIEDSGD----A 769

Query: 1282 SHETDSASPK--LNDAS----QSSLDFP------------------SPDFQTDITVYESA 1175
            + +TD +S K   ND S     S  +FP                   P  Q+  ++ ES 
Sbjct: 770  AEDTDPSSQKELSNDFSDTDHDSQQEFPINPFFQYEGKVEAMGDTIQPQHQSISSIKESK 829

Query: 1174 HLPKLDTEEKIIMNGESRVTSFSSDSSKTCRQTSLSAT-SDAKPRLNDIKTMESSTDSPK 998
             +  ++ +++      S V+   S SS+   +   S T S  KPR  + K   S     K
Sbjct: 830  SMFNVNVDQETF---GSAVSESVSKSSRGEVKIHFSETRSFNKPREVNNKMEVSQPPPVK 886

Query: 997  SDSRLSVHTVTENGYSSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKT 818
                L        G S++ V+L N+ERLLLRKQALKMKK+P+ A+G+SN + GVA+ IK 
Sbjct: 887  PQQTLRSTRSRSEGMSTRRVQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKE 946

Query: 817  HFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTK 638
            HF++YPLAIVNVKGRAKGTSV+EVV KLE+ TGAVLVSQEPSK+ILYRGWG   E  ++ 
Sbjct: 947  HFKKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPGGERGASN 1006

Query: 637  GKSKINSSPSAGMESKTRHVISPELISAIRLECGLQSDLD 518
            G    NS  S   E K    ISPELISAIRLECGLQS+ D
Sbjct: 1007 GNDTSNSKNS--REQKELMSISPELISAIRLECGLQSNND 1044


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score = 1003 bits (2593), Expect = 0.0
 Identities = 567/1024 (55%), Positives = 696/1024 (67%), Gaps = 18/1024 (1%)
 Frame = -1

Query: 3595 FRSPYTKTLFNPFSV-PATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQSAI 3419
            F SP      +P S+ P+TF     + SKF        + R   A +PDA  +TLP++AI
Sbjct: 36   FPSPTPTFTSSPPSISPSTFKTLNPKPSKF--------ILR---ASNPDA--QTLPKTAI 82

Query: 3418 QRIAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPE 3239
            QRIAEKLRSLGYV+ ++ +   +++     S GEIFVPLP QLPK+RVGHT D SWS PE
Sbjct: 83   QRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRVGHTIDQSWSLPE 142

Query: 3238 NPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKLPQEELKRLRTXXXXX 3059
            NPVPEPG+G  I R+HELR  V +EK   R K+ E  PTLAEL LP+EEL+RL+      
Sbjct: 143  NPVPEPGTGGVITRFHELRKEVKREKKLVR-KEDERAPTLAELTLPEEELRRLKGIGIQI 201

Query: 3058 XXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWRS 2879
                      ITEGIVNGIHERWR+ E+VKI CEDIC++NM+RTHD+LERKTGGLVIWRS
Sbjct: 202  RKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVIWRS 261

Query: 2878 GSNIVLYRGADYKYPYFLSEECSRNVASEEVP---------HNHGTTAXXXXXXXXXXXX 2726
            GS I+LYRGA+YKYPYFLS+    N +S +           H+                 
Sbjct: 262  GSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAGP 321

Query: 2725 XXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGD 2546
               NK++   LIQGVG P RVRFQLPGEAQL EEAD LL GLGPRFTDWWGY+PLP+D D
Sbjct: 322  MPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDAD 381

Query: 2545 LLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIK 2366
            LLPAVVPG+RRPFRLLPYG+ PKLTNDEMT+L+RLGRPLPCHFALGRNRKLQGLAA++IK
Sbjct: 382  LLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIK 441

Query: 2365 LWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSA 2186
            LWEKCEIAKIA+KRGVQNTNSE+MAEELK LTGG LLSRDREFIV YRGKDFLP AVSSA
Sbjct: 442  LWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSA 501

Query: 2185 IEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYE-KNRKDQKFELSSEERELKS 2009
            IE RRKY +   ++  D +   +   E E  TS    + +     DQK    S+ R L+S
Sbjct: 502  IEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRS 561

Query: 2008 TEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTM 1829
             EA V RT+                    E  +I QQP++DKEGITE+E+YMLRK+GL M
Sbjct: 562  AEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRM 621

Query: 1828 KPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVE 1649
            KPFLLLGRRG+F GTVENMHLHWKYRELVKII+ GRS+E++H VARTLEAESGGILVAVE
Sbjct: 622  KPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVE 681

Query: 1648 RVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDL 1469
            RVSKGYAII+YRGKNY RPASLRPQ+LLNKR+A+KRS+EAQRRESLK+HVL+L++NID+L
Sbjct: 682  RVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDEL 741

Query: 1468 KLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQSPVGSECNREV 1289
                 KH+    +   + +  QL ++  +H  +   G+ +++     + S  G + +R  
Sbjct: 742  -----KHQLVSRIKDKETNSKQLVDKSRLHLARERYGADVIL-----IHSSDGMDSSR-- 789

Query: 1288 TGSHETDSASPKLNDASQSSLDFPSP-DFQTDITVYESAH---LPKLDTEEKIIMNGESR 1121
                  DS     ND     +DFPS  D  TD    E +    L +++T     MN E  
Sbjct: 790  ------DSLQTSHND---KRIDFPSMCDSDTDEANPEPSSESVLKEIETNVLTDMNEEGE 840

Query: 1120 VTSFSSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTE---NGYS 950
             T+ S D      +TS  A       +N  +TMESS  S K++ +  V    +   N   
Sbjct: 841  CTTCSEDLVSQ-GETSCYAI------VNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMP 893

Query: 949  SKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRA 770
             +A  L N+ERLLLRKQAL+MKKRP+ A+G+SN + GVA+ IK HF+++PLAIVNVKGRA
Sbjct: 894  FRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRA 953

Query: 769  KGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAGMESK 590
            KGTSVQEV+ KLE+ TGAVLVSQEPSK+ILYRGWG++EE   +   ++IN    +  E+ 
Sbjct: 954  KGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWGAREENGRSYRMNRINIVFKSAEENS 1013

Query: 589  TRHV 578
            T+ V
Sbjct: 1014 TQMV 1017


>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
            gi|223543418|gb|EEF44949.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1009

 Score =  982 bits (2538), Expect = 0.0
 Identities = 549/1001 (54%), Positives = 683/1001 (68%), Gaps = 18/1001 (1%)
 Frame = -1

Query: 3475 KNSAVSPDADTRTLPQSAIQRIAEKLRSLGYVEDEKDKDSSTTNNKGTSS-PGEIFVPLP 3299
            K+S     ++++T+P SAIQRIA+KLRSLG+ E   + +  T N+  T    GEIF+PLP
Sbjct: 38   KSSITIHCSNSKTVPSSAIQRIADKLRSLGFAEH--NPEPHTRNSAETKQREGEIFIPLP 95

Query: 3298 TQLPKYRVGHTFDSSWSTPENPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTL 3119
             +L KYRVGHT D SWSTPENPVP PGSGNAI RYHELR  V KE+  E  K++  VPTL
Sbjct: 96   NELSKYRVGHTLDPSWSTPENPVPRPGSGNAILRYHELRKQVKKER--EDKKREAKVPTL 153

Query: 3118 AELKLPQEELKRLRTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMN 2939
            AEL L +EEL+RLR                ITEGIVNGIHERWR++E+VKI CED+CRMN
Sbjct: 154  AELSLSEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMN 213

Query: 2938 MRRTHDLLERKTGGLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVASEEV---PHNHGT 2768
            M+RTHDLLERKTGGLV+WR+GS IVLYRG +Y YPYFLS+  + N  S +     H H  
Sbjct: 214  MKRTHDLLERKTGGLVVWRAGSKIVLYRGVNYIYPYFLSDNTTENDTSIDAVQDTHKHND 273

Query: 2767 T-----AXXXXXXXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAG 2603
            +                     NK   P LIQGVG PNRVRFQLPGEAQLAEE DSLL G
Sbjct: 274  SDKIKSCSSSVDGVKFSGPSPTNKAVRPALIQGVGLPNRVRFQLPGEAQLAEEVDSLLEG 333

Query: 2602 LGPRFTDWWGYEPLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPC 2423
            LGPRF+DWWGYEPLPVD DLLPA+VPG+++PFRLLPYG+ P LTNDEMT LKRLGRPLPC
Sbjct: 334  LGPRFSDWWGYEPLPVDADLLPAIVPGYQKPFRLLPYGIKPILTNDEMTTLKRLGRPLPC 393

Query: 2422 HFALGRNRKLQGLAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDR 2243
            HF LGRNRKLQGLAA+IIKLWEKCEIAKIA+KRGVQNTNSE+MAEELK LTGG LLSRDR
Sbjct: 394  HFVLGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGTLLSRDR 453

Query: 2242 EFIVLYRGKDFLPAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQ-----QTSGQV 2078
            EFIVLYRGKDFLP+AVSSAI+ERR +     ++ TD +       E E        SG  
Sbjct: 454  EFIVLYRGKDFLPSAVSSAIKERRNHVFNVAKERTDNSTSAETAKEAEDVEDGTSNSGSQ 513

Query: 2077 CEYEKNRKDQKFELSSEERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQ 1898
             E+  N  +Q ++L S++R+L  T+ A+ RTS                    EN E+SQQ
Sbjct: 514  DEFHGN-NEQSYDL-SKQRKLSFTKEAIKRTSIRLSMALEKKAKAVKLLAEIENSEMSQQ 571

Query: 1897 PDVDKEGITEDEKYMLRKIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRS 1718
            P++DKEGIT++E+YMLRK+GL MKPFLL+GRRGVF GT+ENMHLHWKYRELVKII   RS
Sbjct: 572  PEIDKEGITDEERYMLRKVGLKMKPFLLIGRRGVFDGTIENMHLHWKYRELVKIICKERS 631

Query: 1717 MEEVHVVARTLEAESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRS 1538
            +  VH VA++LEAESGGILVAVERVSKGYAI+VYRGKNY RPA LRP +LL+KR+AMKRS
Sbjct: 632  LNAVHEVAQSLEAESGGILVAVERVSKGYAIVVYRGKNYQRPALLRPPTLLSKREAMKRS 691

Query: 1537 IEAQRRESLKVHVLKLSQNIDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEG 1358
            +EAQRRESLK+HVL+L++NI+DLKL+L    +G  +  ++     +   +E H   +   
Sbjct: 692  LEAQRRESLKLHVLRLTRNINDLKLKL--LFNGNGIGRSEFESLSISLSKESHASVN--- 746

Query: 1357 SALVVTTESCVQSPVGSECNREVTGSHETDSASPKLNDASQSSLDFPSPDFQTDITVYES 1178
              ++   E   Q       +    G +E +S+S  L+  + +SL         D T + +
Sbjct: 747  --IIQPDEQASQINPSLLYDGIRIGKNEPESSSESLSKETHASLFTAINGGAVDSTSFPN 804

Query: 1177 AHLPKLDTEEKIIMNGESRVTSFSSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPK 998
              +    +EE+          S+   S++ C              +++ K M S+ +S  
Sbjct: 805  TSM----SEER---------GSYPCVSAENC--------------VHENKIMGSTVESTT 837

Query: 997  S--DSRLSVHTVTENGYSSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAI 824
            +  +  +S+    +N   S  + L N++RL+LRKQALKMK RP+ A+G+SN + GVA+ I
Sbjct: 838  TVLEESVSISANEDNEMQSSTICLSNRDRLMLRKQALKMKNRPVLAVGRSNIVTGVAKTI 897

Query: 823  KTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKS 644
            K HF++YPLAIVNVKGRAKGTSVQEVV +LE+ TG VLVSQEPSK+ILYRGWG+ +EP  
Sbjct: 898  KAHFKKYPLAIVNVKGRAKGTSVQEVVFQLEQATGGVLVSQEPSKVILYRGWGAFDEP-G 956

Query: 643  TKGKSKINSS--PSAGMESKTRHVISPELISAIRLECGLQS 527
             +GK   + S   S   E  +R  +SPEL++AIRLECGLQ+
Sbjct: 957  HRGKKNAHDSGKTSVVKEESSRLGMSPELMAAIRLECGLQN 997


>ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X6 [Citrus sinensis]
          Length = 1031

 Score =  974 bits (2519), Expect = 0.0
 Identities = 555/1044 (53%), Positives = 690/1044 (66%), Gaps = 32/1044 (3%)
 Frame = -1

Query: 3565 NPFSVPAT-------FFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQ----SAI 3419
            NP  +P T       FF F    S     +P   +   +   +P   + T  Q    SAI
Sbjct: 9    NPILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSETRVQNDTTSAI 68

Query: 3418 QRIAEKLRSLGYVEDEKDKDSSTT---NNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWS 3248
            QRIA+KLRSLG VE    KD +       + T + GEIF+PLP ++PKYRVGHT D SWS
Sbjct: 69   QRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSWS 128

Query: 3247 TPENPVPEPGSGNAIQRYHELRNVVIKEK-IQERSK---KKEYVPTLAELKLPQEELKRL 3080
            TPENP+P PG+G AI RY++L   V ++K + + SK   K++ VPTLAELKL  +EL+RL
Sbjct: 129  TPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRL 188

Query: 3079 RTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTG 2900
            RT               ITEGIVNGIHERWR  E+VKI CED+CR+NM+RTHD LERKTG
Sbjct: 189  RTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTG 248

Query: 2899 GLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS-EEVPH--------NHGTTAXXXXX 2747
            GLV+WRSGS I+LYRGADYKYPYFL++E S + AS +++P+        +   T      
Sbjct: 249  GLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGAD 308

Query: 2746 XXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYE 2567
                      NK     LI  VGSP+++R+QLPGEA+L EEAD LL GLGPRFTDWWGY+
Sbjct: 309  SAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYD 368

Query: 2566 PLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQG 2387
            P PVD DLL A VPG+RRPFRLLPYGV PKLTNDEMT L+RLGRPLPCHFALGRNR LQG
Sbjct: 369  PQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQG 428

Query: 2386 LAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFL 2207
            LAAAI+KLWEKCEIAKIA+KRG QNTNSE+MA+ELK LTGG LLSRDREFIV YRGKDFL
Sbjct: 429  LAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFL 488

Query: 2206 PAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSE 2027
            P A S AIEERRK+E +       K  P +G N H+        E+     DQK  + SE
Sbjct: 489  PPAASCAIEERRKHEFST--SNDSKEEPELG-NRHDNSGDNTQDEFGCT-NDQKSTMHSE 544

Query: 2026 ERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLR 1847
            ++E +S E A+ RT+                      EE  +Q +VDKEGITE+E+YMLR
Sbjct: 545  QKERRSAEVAIRRTN-IRLSRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLR 603

Query: 1846 KIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGG 1667
            K+GL MK FLL+GRRGVF GTVENMHLHWK+RELVKII+  R +E     ARTLE ESGG
Sbjct: 604  KVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGG 663

Query: 1666 ILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLS 1487
            ILVAVERV+KGYAII+YRGKNY RPA LRP++LL KR+AMKRS+EAQRR+SLK+HVL+L+
Sbjct: 664  ILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELT 723

Query: 1486 QNIDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQSPVGS 1307
            +NI+ LKLQL K ++  +++    S   L  E E+ +MQ  E          C++S    
Sbjct: 724  RNIEKLKLQLVKDKEANSLETIDESILPLVKE-EIGDMQPAE----------CMRSDTSH 772

Query: 1306 ECNREVTGSHETDSASPKLNDASQSSLDFPSPDFQTDITVYESAHLPKLDTEEKIIMNGE 1127
            E N +  G    D  S + ND   +++D P P  Q D               E +  NG 
Sbjct: 773  EVNVQARGECGADLTSTESNDTGDATIDGP-PAIQQD------------KQTESLTHNGV 819

Query: 1126 SRVTSFSSDSS--KTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTENGY 953
            +  TS   D+S   +  +   S+   AK R ++ + +E S +  K  S LS    T N +
Sbjct: 820  ASGTSSCPDNSMCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVW 879

Query: 952  ---SSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNV 782
               +S+A++L N++RLLLRKQAL+MKKRP+ A+G+SN + GVA+AIK HF +YPLAIVNV
Sbjct: 880  NENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNV 939

Query: 781  KGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAG 602
            KGRAKGTSVQEVV KLEE TGAVLVSQEPSK+ILYRGWG+++E  S +G+    + PS  
Sbjct: 940  KGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDE-SSPRGRQNSRAKPSIV 998

Query: 601  MESKTRHVISPELISAIRLECGLQ 530
             + +    +S EL++AI+LECGLQ
Sbjct: 999  RDVRPWPAVSRELLAAIKLECGLQ 1022


>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 1062

 Score =  973 bits (2514), Expect = 0.0
 Identities = 552/1062 (51%), Positives = 700/1062 (65%), Gaps = 50/1062 (4%)
 Frame = -1

Query: 3565 NPFSVPAT-------FFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQ----SAI 3419
            NP  +P T       FF F    S     +P   +   +   +P   + T  Q    SAI
Sbjct: 9    NPILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSETRVQNDTTSAI 68

Query: 3418 QRIAEKLRSLGYVEDEKDKDSSTT---NNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWS 3248
            QRIA+KLRSLG VE    KD +       + T + GEIF+PLP ++PKYRVGHT D SWS
Sbjct: 69   QRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSWS 128

Query: 3247 TPENPVPEPGSGNAIQRYHELRNVVIKEK-IQERSK---KKEYVPTLAELKLPQEELKRL 3080
            TPENP+P PG+G AI RY++L   V ++K + + SK   K++ VPTLAELKL  +EL+RL
Sbjct: 129  TPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRL 188

Query: 3079 RTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTG 2900
            RT               ITEGIVNGIHERWR  E+VKI CED+CR+NM+RTHD LERKTG
Sbjct: 189  RTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTG 248

Query: 2899 GLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS-EEVPH--------NHGTTAXXXXX 2747
            GLV+WRSGS I+LYRGADYKYPYFL++E S + AS +++P+        +   T      
Sbjct: 249  GLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGAD 308

Query: 2746 XXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYE 2567
                      NK     LI  VGSP+++R+QLPGEA+L EEAD LL GLGPRFTDWWGY+
Sbjct: 309  SAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYD 368

Query: 2566 PLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQG 2387
            P PVD DLL A VPG+RRPFRLLPYGV PKLTNDEMT L+RLGRPLPCHFALGRNR LQG
Sbjct: 369  PQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQG 428

Query: 2386 LAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFL 2207
            LAAAI+KLWEKCEIAKIA+KRG QNTNSE+MA+ELK LTGG LLSRDREFIV YRGKDFL
Sbjct: 429  LAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFL 488

Query: 2206 PAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSE 2027
            P A S AIEERRK+E +       K  P +G N H+        E+     DQK  + SE
Sbjct: 489  PPAASCAIEERRKHEFST--SNDSKEEPELG-NRHDNSGDNTQDEFGCT-NDQKSTMHSE 544

Query: 2026 ERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLR 1847
            ++E +S E A+ RT+                      EE  +Q +VDKEGITE+E+YMLR
Sbjct: 545  QKERRSAEVAIRRTN-IRLSRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLR 603

Query: 1846 KIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGG 1667
            K+GL MK FLL+GRRGVF GTVENMHLHWK+RELVKII+  R +E     ARTLE ESGG
Sbjct: 604  KVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGG 663

Query: 1666 ILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLS 1487
            ILVAVERV+KGYAII+YRGKNY RPA LRP++LL KR+AMKRS+EAQRR+SLK+HVL+L+
Sbjct: 664  ILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELT 723

Query: 1486 QNIDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQSPVGS 1307
            +NI+ LKLQL K ++  +++    S   L  E E+ +MQ  E          C++S    
Sbjct: 724  RNIEKLKLQLVKDKEANSLETIDESILPLVKE-EIGDMQPAE----------CMRSDTSH 772

Query: 1306 ECNREVTGSHETDSASPKLNDASQSSLDFP---SPDFQTDITVYESAHLPKLDTEEKI-I 1139
            E N +  G    D  S + ND   +++D P     D QT+   +    + +++++  +  
Sbjct: 773  EVNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGISINEIESKSSLKS 832

Query: 1138 MNGESRVTSFS-------SDSSKTCRQTSL---------SATSDAKPRLNDIKTMESSTD 1007
            ++ ES++   +       +  + +C   S+         S+   AK R ++ + +E S +
Sbjct: 833  VSKESQLNMIADFFAEGVASGTSSCPDNSMCSSDNEPRESSIESAKSRSSENEPIEQSFE 892

Query: 1006 SPKSDSRLSVHTVTENGY---SSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGV 836
              K  S LS    T N +   +S+A++L N++RLLLRKQAL+MKKRP+ A+G+SN + GV
Sbjct: 893  LAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGV 952

Query: 835  AEAIKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQE 656
            A+AIK HF +YPLAIVNVKGRAKGTSVQEVV KLEE TGAVLVSQEPSK+ILYRGWG+++
Sbjct: 953  AKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAED 1012

Query: 655  EPKSTKGKSKINSSPSAGMESKTRHVISPELISAIRLECGLQ 530
            E  S +G+    + PS   + +    +S EL++AI+LECGLQ
Sbjct: 1013 E-SSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQ 1053


>ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 1045

 Score =  972 bits (2513), Expect = 0.0
 Identities = 554/1048 (52%), Positives = 693/1048 (66%), Gaps = 36/1048 (3%)
 Frame = -1

Query: 3565 NPFSVPAT-------FFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQ----SAI 3419
            NP  +P T       FF F    S     +P   +   +   +P   + T  Q    SAI
Sbjct: 9    NPILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSETRVQNDTTSAI 68

Query: 3418 QRIAEKLRSLGYVEDEKDKDSSTT---NNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWS 3248
            QRIA+KLRSLG VE    KD +       + T + GEIF+PLP ++PKYRVGHT D SWS
Sbjct: 69   QRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSWS 128

Query: 3247 TPENPVPEPGSGNAIQRYHELRNVVIKEK-IQERSK---KKEYVPTLAELKLPQEELKRL 3080
            TPENP+P PG+G AI RY++L   V ++K + + SK   K++ VPTLAELKL  +EL+RL
Sbjct: 129  TPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRL 188

Query: 3079 RTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTG 2900
            RT               ITEGIVNGIHERWR  E+VKI CED+CR+NM+RTHD LERKTG
Sbjct: 189  RTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTG 248

Query: 2899 GLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS-EEVPH--------NHGTTAXXXXX 2747
            GLV+WRSGS I+LYRGADYKYPYFL++E S + AS +++P+        +   T      
Sbjct: 249  GLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGAD 308

Query: 2746 XXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYE 2567
                      NK     LI  VGSP+++R+QLPGEA+L EEAD LL GLGPRFTDWWGY+
Sbjct: 309  SAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYD 368

Query: 2566 PLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQG 2387
            P PVD DLL A VPG+RRPFRLLPYGV PKLTNDEMT L+RLGRPLPCHFALGRNR LQG
Sbjct: 369  PQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQG 428

Query: 2386 LAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFL 2207
            LAAAI+KLWEKCEIAKIA+KRG QNTNSE+MA+ELK LTGG LLSRDREFIV YRGKDFL
Sbjct: 429  LAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFL 488

Query: 2206 PAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSE 2027
            P A S AIEERRK+E +       K  P +G N H+        E+     DQK  + SE
Sbjct: 489  PPAASCAIEERRKHEFST--SNDSKEEPELG-NRHDNSGDNTQDEFGCT-NDQKSTMHSE 544

Query: 2026 ERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLR 1847
            ++E +S E A+ RT+                      EE  +Q +VDKEGITE+E+YMLR
Sbjct: 545  QKERRSAEVAIRRTN-IRLSRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLR 603

Query: 1846 KIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGG 1667
            K+GL MK FLL+GRRGVF GTVENMHLHWK+RELVKII+  R +E     ARTLE ESGG
Sbjct: 604  KVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGG 663

Query: 1666 ILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLS 1487
            ILVAVERV+KGYAII+YRGKNY RPA LRP++LL KR+AMKRS+EAQRR+SLK+HVL+L+
Sbjct: 664  ILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELT 723

Query: 1486 QNIDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQSPVGS 1307
            +NI+ LKLQL K ++  +++    S   L  E E+ +MQ  E          C++S    
Sbjct: 724  RNIEKLKLQLVKDKEANSLETIDESILPLVKE-EIGDMQPAE----------CMRSDTSH 772

Query: 1306 ECNREVTGSHETDSASPKLNDASQSSLDFP---SPDFQTDITVYE---SAHLPKLDTEEK 1145
            E N +  G    D  S + ND   +++D P     D QT+   +    S      D   +
Sbjct: 773  EVNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGVASGTSSCPDNSMQ 832

Query: 1144 IIMNGESRVTSFSSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVT 965
             +M   + V +    S    R++S+ +   AK R ++ + +E S +  K  S LS    T
Sbjct: 833  EVMEYNTIVDAEQCSSDNEPRESSIES---AKSRSSENEPIEQSFELAKGRSGLSTPIGT 889

Query: 964  ENGY---SSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLA 794
             N +   +S+A++L N++RLLLRKQAL+MKKRP+ A+G+SN + GVA+AIK HF +YPLA
Sbjct: 890  GNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLA 949

Query: 793  IVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSS 614
            IVNVKGRAKGTSVQEVV KLEE TGAVLVSQEPSK+ILYRGWG+++E  S +G+    + 
Sbjct: 950  IVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDE-SSPRGRQNSRAK 1008

Query: 613  PSAGMESKTRHVISPELISAIRLECGLQ 530
            PS   + +    +S EL++AI+LECGLQ
Sbjct: 1009 PSIVRDVRPWPAVSRELLAAIKLECGLQ 1036


>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 1032

 Score =  972 bits (2512), Expect = 0.0
 Identities = 563/1064 (52%), Positives = 701/1064 (65%), Gaps = 27/1064 (2%)
 Frame = -1

Query: 3640 HVQMLLSPGNDQLFSFRSPYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAV 3461
            H      P  DQ   F SP+T   F P     T    P +SS+F       L C      
Sbjct: 5    HSSFTFQPLTDQ---FPSPFT---FFPSHFHPTLISRPPKSSRFL------LRCCS---- 48

Query: 3460 SPDADTRTLPQSAIQRIAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKY 3281
                D+ TLP+SAIQRIA+KLRSLG+ E   +      +    S+PG IFVPLP QLPKY
Sbjct: 49   ---IDSETLPKSAIQRIADKLRSLGFTESPPEP---LPDPNSPSAPGAIFVPLPNQLPKY 102

Query: 3280 RVGHTFDSSWSTPENPVPEPGSGNAIQRYHELRNVVIKEKIQE---RSKKKEYVPTLAEL 3110
            RVGHT DSSWS PENPVPEPG+G AI+R+HELR  V K K ++     K++E  P+LAEL
Sbjct: 103  RVGHTIDSSWSMPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAEL 162

Query: 3109 KLPQEELKRLRTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRR 2930
             L +EEL RLRT               ITEGIVN IHE WR++E+VKI CED+CR+NM+R
Sbjct: 163  SLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKR 222

Query: 2929 THDLLERKTGGLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVASEEVPHNHGT------ 2768
            THDLLERKTGG+V+WRSGS I+LYRG +Y YPYF  E      + + +P +H        
Sbjct: 223  THDLLERKTGGIVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSDDGGNSE 282

Query: 2767 --TAXXXXXXXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGP 2594
              +                 K+  P LIQGVG+PNRVRFQLPGEA+LAE+A+SLL GLGP
Sbjct: 283  TESTLSCINDERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGP 342

Query: 2593 RFTDWWGYEPLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFA 2414
            RF+DWWGY+PLPVD DLLPA+VPG+R+PFRLLPYGV PKLTNDEMT L+RL RPLPCHFA
Sbjct: 343  RFSDWWGYDPLPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFA 402

Query: 2413 LGRNRKLQGLAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFI 2234
            LGRNRKLQGLAA+II+LWEKCEIAKIA+KRGVQNTN++LMAEEL+LLTGG LLSRDREFI
Sbjct: 403  LGRNRKLQGLAASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFI 462

Query: 2233 VLYRGKDFLPAAVSSAIEERRKYELANKRKGTDKNLPGVGEN-EHEQQTSGQVCEYEKNR 2057
            VLYRGKDFLP AVSSA+E++R   L ++ K TD +    G+  + E   +G   E +   
Sbjct: 463  VLYRGKDFLPFAVSSAMEQKRHMRL-HEMKQTDNSPATTGQGLKLEINENGPTNESQSIT 521

Query: 2056 KDQKFELSSEERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEG 1877
              +K  + SE R+L S+E ++ +TS                    E EE  QQP++DKEG
Sbjct: 522  GWKK--IVSERRKLMSSETSMRKTSIKLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEG 579

Query: 1876 ITEDEKYMLRKIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVV 1697
            IT +E+YML+K+GL MKPFLLLGRRGVF GTVENMHLHWKYRELVKIIT  RS + VH V
Sbjct: 580  ITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDV 639

Query: 1696 ARTLEAESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRE 1517
            ARTLEAESGGILVAVERV + +AII++RGKNY RP+ LRP+SLLNK++A+KRSIEAQRR+
Sbjct: 640  ARTLEAESGGILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRK 699

Query: 1516 SLKVHVLKLSQNIDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTT 1337
            SLK+HVLKL+QN+++LKL+L + +    M+  K S  Q G E  + E+Q+T GS  +V  
Sbjct: 700  SLKLHVLKLTQNVEELKLKLDEDKRAIGMESIKTSTFQQGKE-GIDEIQTT-GSLKLVAD 757

Query: 1336 ESCVQSPVGSECNRE-----VTGSHETDSASPKLNDASQSSLDFPSPDF------QTDIT 1190
             +C+     S C  E     V   H T S+     D S + L   +  F      Q++ T
Sbjct: 758  SACLTHAENSTCLEENEVAKVKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNAT 817

Query: 1189 VYESAHLPKLDTEEKIIMNGESRVTSFSSDS-SKTCRQTSLSATSDAKPRLNDIKTMESS 1013
            V  S    +     K+ M+  +   +    S + +    S S TSDA   +   K  + S
Sbjct: 818  VRPSFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHVAMNKDTKPS 877

Query: 1012 T--DSPKSDSRLSVHTVTENGY-SSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQID 842
               +  KS   LS   + + GY  +   +L NKERLLLR+QALKMKK P+ ++GKSN I 
Sbjct: 878  VRLEEEKSPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQALKMKKLPVLSVGKSNVIT 937

Query: 841  GVAEAIKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGS 662
            GVA+AIK HF+++ LAIVNVKGRAKGTSVQE+V KLE+ TGAVLVSQEPSK+ILYRGW  
Sbjct: 938  GVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRGW-- 995

Query: 661  QEEPKSTKGKSKINSSPSAGMESKTRHVISPELISAIRLECGLQ 530
            +EE +  K     NS        + R  +S EL++AIR+ECGL+
Sbjct: 996  EEEDRKQKATMMKNS-------GEDRLSMSSELMAAIRIECGLR 1032


>ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 1050

 Score =  971 bits (2509), Expect = 0.0
 Identities = 553/1053 (52%), Positives = 693/1053 (65%), Gaps = 41/1053 (3%)
 Frame = -1

Query: 3565 NPFSVPAT-------FFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQ----SAI 3419
            NP  +P T       FF F    S     +P   +   +   +P   + T  Q    SAI
Sbjct: 9    NPILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSETRVQNDTTSAI 68

Query: 3418 QRIAEKLRSLGYVEDEKDKDSSTT---NNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWS 3248
            QRIA+KLRSLG VE    KD +       + T + GEIF+PLP ++PKYRVGHT D SWS
Sbjct: 69   QRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSWS 128

Query: 3247 TPENPVPEPGSGNAIQRYHELRNVVIKEK-IQERSK---KKEYVPTLAELKLPQEELKRL 3080
            TPENP+P PG+G AI RY++L   V ++K + + SK   K++ VPTLAELKL  +EL+RL
Sbjct: 129  TPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRL 188

Query: 3079 RTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTG 2900
            RT               ITEGIVNGIHERWR  E+VKI CED+CR+NM+RTHD LERKTG
Sbjct: 189  RTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTG 248

Query: 2899 GLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS-EEVPH--------NHGTTAXXXXX 2747
            GLV+WRSGS I+LYRGADYKYPYFL++E S + AS +++P+        +   T      
Sbjct: 249  GLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGAD 308

Query: 2746 XXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYE 2567
                      NK     LI  VGSP+++R+QLPGEA+L EEAD LL GLGPRFTDWWGY+
Sbjct: 309  SAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYD 368

Query: 2566 PLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQG 2387
            P PVD DLL A VPG+RRPFRLLPYGV PKLTNDEMT L+RLGRPLPCHFALGRNR LQG
Sbjct: 369  PQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQG 428

Query: 2386 LAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFL 2207
            LAAAI+KLWEKCEIAKIA+KRG QNTNSE+MA+ELK LTGG LLSRDREFIV YRGKDFL
Sbjct: 429  LAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFL 488

Query: 2206 PAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSE 2027
            P A S AIEERRK+E +       K  P +G N H+        E+     DQK  + SE
Sbjct: 489  PPAASCAIEERRKHEFST--SNDSKEEPELG-NRHDNSGDNTQDEFGCT-NDQKSTMHSE 544

Query: 2026 ERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLR 1847
            ++E +S E A+ RT+                      EE  +Q +VDKEGITE+E+YMLR
Sbjct: 545  QKERRSAEVAIRRTN-IRLSRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLR 603

Query: 1846 KIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGG 1667
            K+GL MK FLL+GRRGVF GTVENMHLHWK+RELVKII+  R +E     ARTLE ESGG
Sbjct: 604  KVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGG 663

Query: 1666 ILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLS 1487
            ILVAVERV+KGYAII+YRGKNY RPA LRP++LL KR+AMKRS+EAQRR+SLK+HVL+L+
Sbjct: 664  ILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELT 723

Query: 1486 QNIDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQSPVGS 1307
            +NI+ LKLQL K ++  +++    S   L  E E+ +MQ  E          C++S    
Sbjct: 724  RNIEKLKLQLVKDKEANSLETIDESILPLVKE-EIGDMQPAE----------CMRSDTSH 772

Query: 1306 ECNREVTGSHETDSASPKLNDASQSSLDFP---SPDFQTDITVYESAHLPKL-------- 1160
            E N +  G    D  S + ND   +++D P     D QT+   +       +        
Sbjct: 773  EVNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNDFFAEGVASGTSSCP 832

Query: 1159 DTEEKIIMNGESRVTSFSSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLS 980
            D   + +M   + V +    S    R++S+ +   AK R ++ + +E S +  K  S LS
Sbjct: 833  DNSMQEVMEYNTIVDAEQCSSDNEPRESSIES---AKSRSSENEPIEQSFELAKGRSGLS 889

Query: 979  VHTVTENGY---SSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFR 809
                T N +   +S+A++L N++RLLLRKQAL+MKKRP+ A+G+SN + GVA+AIK HF 
Sbjct: 890  TPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFE 949

Query: 808  RYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKS 629
            +YPLAIVNVKGRAKGTSVQEVV KLEE TGAVLVSQEPSK+ILYRGWG+++E  S +G+ 
Sbjct: 950  KYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDE-SSPRGRQ 1008

Query: 628  KINSSPSAGMESKTRHVISPELISAIRLECGLQ 530
               + PS   + +    +S EL++AI+LECGLQ
Sbjct: 1009 NSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQ 1041


>gb|EMJ18282.1| hypothetical protein PRUPE_ppa000515mg [Prunus persica]
          Length = 1117

 Score =  971 bits (2509), Expect = 0.0
 Identities = 567/1117 (50%), Positives = 711/1117 (63%), Gaps = 96/1117 (8%)
 Frame = -1

Query: 3589 SPYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTL-PQSAIQR 3413
            SP+   +    S+ + FF FP ++   Q+ +P     R ++       T+TL P+SAIQR
Sbjct: 11   SPFPPKILTDQSL-SPFFSFP-KTLPSQNPKPSKFAIRSSTT-----GTKTLAPKSAIQR 63

Query: 3412 IAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPENP 3233
            IAEKLRSLG+ E+ +           T   GEIFVPLP +LPKYRVGHT DSSWSTPENP
Sbjct: 64   IAEKLRSLGFTENNEKPQPQPD----TKYAGEIFVPLPQRLPKYRVGHTLDSSWSTPENP 119

Query: 3232 VPEPGSGNAIQRYHELRNVVIKEK-IQERSKKKEYVPTLAELKLPQEELKRLRTXXXXXX 3056
            VPEPG+G AI R+HELR  V K+K +++  KK+E VPTLAEL L + EL+RL T      
Sbjct: 120  VPEPGTGRAIARFHELRREVKKQKELEKTGKKEERVPTLAELSLGKGELRRLTTVGIGLR 179

Query: 3055 XXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWRSG 2876
                     ITEGIVNGIHE WR++E+VKI CED+CRMNM+RTHD+LERKTGGLV+WRSG
Sbjct: 180  KKLKIGKAGITEGIVNGIHENWRRSEVVKIVCEDLCRMNMKRTHDMLERKTGGLVVWRSG 239

Query: 2875 SNIVLYRGADYKYPYFLSEECSRNVASEEVPHNHGTTAXXXXXXXXXXXXXXXNKV---- 2708
            S IVLYRG +YKYPYFL ++   + ++ +  HN    A                 +    
Sbjct: 240  SKIVLYRGVNYKYPYFLRDKVDED-STIDTSHNALPDAHINDGINEISNEVNSAIIPSTT 298

Query: 2707 ---SHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGDLLP 2537
               + P L++GVG  +RVRFQLPGEAQL EEAD +L GLGPRFTDWWGYEPLPVD DLLP
Sbjct: 299  NERAQPMLVKGVGLQDRVRFQLPGEAQLTEEADHMLEGLGPRFTDWWGYEPLPVDADLLP 358

Query: 2536 AVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIKLWE 2357
            A+VPG+R+PFRLLPYG+ PKLT+DEMT ++RLGRPLPCHFALGRNR LQGLA++I+KLWE
Sbjct: 359  AIVPGYRKPFRLLPYGLKPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLASSIVKLWE 418

Query: 2356 KCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSAIEE 2177
            KCEIAKIA+KRGVQNTN+E+MAEELK LTGG LL+RDREFIVLYRGKDFLP AVSSAIEE
Sbjct: 419  KCEIAKIAVKRGVQNTNTEIMAEELKRLTGGTLLARDREFIVLYRGKDFLPPAVSSAIEE 478

Query: 2176 RRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSEERELKSTEAA 1997
            RRKY +  +++  +         E E +T  +     +   D K  L S +R+LKS E  
Sbjct: 479  RRKYAIHAEKQIAEHGTSVTTRQELEPRTEPE--NKHEWTNDHKMGLPSAKRKLKSAEVV 536

Query: 1996 VGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTMKPFL 1817
            V RTS                    EN  I QQP++DKEGIT++E+YMLRK+GL MKPFL
Sbjct: 537  VNRTSIKLSMALEKKAKAEKLLAELENAAIPQQPEIDKEGITKEERYMLRKVGLRMKPFL 596

Query: 1816 LLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVERVSK 1637
            L+GRRGVF GT+ENMHLHWKYRELVKII   +S+E V  VA+TLEAESGGILVAVERVSK
Sbjct: 597  LMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIEAVQQVAQTLEAESGGILVAVERVSK 656

Query: 1636 GYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDLKLQL 1457
            GYAIIVYRGKNY+RPASLRPQ+LLNKR+AMKRSIEAQRRESLK+HVL+L++NID+LKL L
Sbjct: 657  GYAIIVYRGKNYSRPASLRPQTLLNKREAMKRSIEAQRRESLKLHVLRLNENIDELKLLL 716

Query: 1456 GKHEDGGNMDLAKASEHQLG-NEQEMH--EMQSTEGSALVVTTESCVQ------------ 1322
             K ++  N+     S ++L  ++QE H   +   +G   VV  +   Q            
Sbjct: 717  VKDKEADNLQSVGESRNELARDKQEAHVTPVNLNDGMGAVVNGQLATQQDEVISFSSTWD 776

Query: 1321 -SPVG----SECNREVTGSHE---------------TDSASPKLNDASQSSLDFPSPDFQ 1202
               +G       N  VT   +                ++ +  L D +    DF S  F 
Sbjct: 777  EDEIGKFKPGSSNESVTNEEDEIGKVEPGPSNESVTNETPANFLKDTNGEVGDFVSTCFP 836

Query: 1201 TDI----TVYESAHL---------------PKLDTEEKIIMNG-----ESRVTSFSS--- 1103
             D+     + E  H+                KL+     I+NG     + +V +FSS   
Sbjct: 837  EDVMPAGVISEIVHVLFFKGRGKQEAHVTPMKLNDGMGTIVNGQLATQQDKVITFSSICC 896

Query: 1102 -DSSKTCRQTSLS--ATSDAKPRL-----------------NDIKTMESSTDSPKSDSRL 983
             D +      S S   T++    L                  D    +SS     S+S  
Sbjct: 897  EDENGEVEPISSSEPVTNETHANLFRDVNGEEGVSISTSFPEDAMAKDSSGRFGNSESEP 956

Query: 982  SVHTVTENGYSS---KAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHF 812
            SV  +    ++    K+V L N ERLLLRKQALKMKKRP+ A+G++N + GVA+ IK HF
Sbjct: 957  SVPVMVRKDFNERPLKSVHLSNGERLLLRKQALKMKKRPVLAVGRNNIVSGVAKTIKAHF 1016

Query: 811  RRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGS--QEEPKSTK 638
             ++PLAIVNVKGRAKGTSV+EVVLKLE+ TG VLVSQEPSK+ILYRGWG+    + K++ 
Sbjct: 1017 EKHPLAIVNVKGRAKGTSVREVVLKLEQATGGVLVSQEPSKVILYRGWGAAGDNDRKASN 1076

Query: 637  GKSKINSSPSAGMESKTRHVISPELISAIRLECGLQS 527
             + K++          T+  +SPEL++AIRLECG +S
Sbjct: 1077 TRKKVS----------TQGAVSPELLAAIRLECGFKS 1103


>gb|EOY02282.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
          Length = 1045

 Score =  968 bits (2503), Expect = 0.0
 Identities = 539/1000 (53%), Positives = 690/1000 (69%), Gaps = 29/1000 (2%)
 Frame = -1

Query: 3442 RTLPQSAIQRIAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTF 3263
            +TLPQSAIQRIA+KLRSLG+ E +  +  S   + G+ SPGEIFVPLP ++PKYRVGHT 
Sbjct: 55   QTLPQSAIQRIADKLRSLGFSETQNPEPESEPGS-GSDSPGEIFVPLPEKIPKYRVGHTI 113

Query: 3262 DSSWSTPENPVPEPGSG--NAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKLPQEEL 3089
            D+SWSTPENPVP+PGSG  + + R+ E++    + K+    ++   VP+LAELKL   EL
Sbjct: 114  DTSWSTPENPVPDPGSGPGSLMARFREMKRE--RRKVGRVKEEDRAVPSLAELKLSAAEL 171

Query: 3088 KRLRTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLER 2909
            +RLRT               ITEGIVNGIHERWR++E+VKI CEDIC+MNM+RTH++LER
Sbjct: 172  RRLRTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEVLER 231

Query: 2908 KTGGLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS---------EEVPHNHGTTAXX 2756
            KTGGLV+WRSGS I+LYRGA+Y+YPYFL+++ + +  S         + V  +   +   
Sbjct: 232  KTGGLVVWRSGSKIILYRGANYRYPYFLADKIATDDTSSNASPDTNMDNVELHETESCSS 291

Query: 2755 XXXXXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWW 2576
                         NK++ P ++QGVGSP+RVRFQLPGEA+L EEA+ LL GLGPRFTDWW
Sbjct: 292  EINSAKTAIPNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWW 351

Query: 2575 GYEPLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRK 2396
            GYEPLPVDGDLLPA++PG+RRPFRLLPYGV P LTNDEMT L+RLGRPLPCHF LGRNRK
Sbjct: 352  GYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRK 411

Query: 2395 LQGLAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGK 2216
            LQGLAA+I+K WEKCEIAK+A+KRGVQNTNSELMAEELK LTGG LLSRD++FIVLYRGK
Sbjct: 412  LQGLAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGK 471

Query: 2215 DFLPAAVSSAIEERRKYELANKRKGTD--KNLPGVGENEHEQQTSGQVCEYEKNRKDQKF 2042
            DFLP+AVSSAIEERR++ +  +++G +  K+     E   E   SG   +   + KDQ+ 
Sbjct: 472  DFLPSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGSESKI-NSAKDQRS 530

Query: 2041 ELSSEERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDE 1862
                + + +KS EAA+ +T                     E  EI QQ ++DKEGIT++E
Sbjct: 531  NFFGDPKNMKSAEAAIRKTDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEE 590

Query: 1861 KYMLRKIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLE 1682
            +YMLRK+GL MKPFLLLGRRGVF GTVENMHLHWKYRELVKII+   ++E VH +AR LE
Sbjct: 591  RYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLE 650

Query: 1681 AESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVH 1502
            AESGGILVAVERVSKGYAIIVYRGKNY RP SLRPQ+LL KRQAMKRS+E QRR+SLK+H
Sbjct: 651  AESGGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLH 710

Query: 1501 VLKLSQNIDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQ 1322
            +L L++N++DL+ QL   ++  +M   + S   L  E E+  +QS E +  V+    C  
Sbjct: 711  ILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQE-ELETLQSVEYTGSVI---ECPA 766

Query: 1321 SPVGSECNREVTGSHETDSASPKLNDASQSSLDFPS-PDFQTDITVYESAHLPKLDTE-E 1148
            S  G   +R+  GS  T   + K+   +  S+  PS  +F    ++++     K ++E  
Sbjct: 767  SSGGHVESRDKDGSESTSMKNDKM--VATISIRQPSKQEFMEPSSIHDGFENHKTESEFS 824

Query: 1147 KIIMNGESRVTSF-----------SSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSP 1001
               +N +S  T             +S       +   S   +A+  +++   MES  +S 
Sbjct: 825  AESVNRKSHATELRALHTQVEMVDTSYPDNLMEEIDDSGAINAEHGVSNNGPMESLVES- 883

Query: 1000 KSDSRLSVHTVTE---NGYSSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAE 830
             S   +S+ +  E   N  +S A  L NK+RLLLRKQALKMKKRP+ A+G+SN + GVA+
Sbjct: 884  ASMLDVSISSAVENVSNKMASTANFLSNKDRLLLRKQALKMKKRPVLAVGRSNIVTGVAK 943

Query: 829  AIKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEP 650
            AI+ HF+++PLAIVNVKGRAKGTSVQEVVLKL+E TGAVLVSQEPSK+ILYRGWG+ +E 
Sbjct: 944  AIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPSKVILYRGWGAGDEL 1003

Query: 649  KSTKGKSKINSSPSAGMESKTRHVISPELISAIRLECGLQ 530
                 ++  +S       ++ R  +SPELI+AIRLECGLQ
Sbjct: 1004 GRGDNRNAKDSL------AQNRPAVSPELIAAIRLECGLQ 1037


>ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 1076

 Score =  967 bits (2500), Expect = 0.0
 Identities = 552/1076 (51%), Positives = 700/1076 (65%), Gaps = 64/1076 (5%)
 Frame = -1

Query: 3565 NPFSVPAT-------FFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQ----SAI 3419
            NP  +P T       FF F    S     +P   +   +   +P   + T  Q    SAI
Sbjct: 9    NPILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSETRVQNDTTSAI 68

Query: 3418 QRIAEKLRSLGYVEDEKDKDSSTT---NNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWS 3248
            QRIA+KLRSLG VE    KD +       + T + GEIF+PLP ++PKYRVGHT D SWS
Sbjct: 69   QRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSWS 128

Query: 3247 TPENPVPEPGSGNAIQRYHELRNVVIKEK-IQERSK---KKEYVPTLAELKLPQEELKRL 3080
            TPENP+P PG+G AI RY++L   V ++K + + SK   K++ VPTLAELKL  +EL+RL
Sbjct: 129  TPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRL 188

Query: 3079 RTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTG 2900
            RT               ITEGIVNGIHERWR  E+VKI CED+CR+NM+RTHD LERKTG
Sbjct: 189  RTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTG 248

Query: 2899 GLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS-EEVPH--------NHGTTAXXXXX 2747
            GLV+WRSGS I+LYRGADYKYPYFL++E S + AS +++P+        +   T      
Sbjct: 249  GLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGAD 308

Query: 2746 XXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYE 2567
                      NK     LI  VGSP+++R+QLPGEA+L EEAD LL GLGPRFTDWWGY+
Sbjct: 309  SAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYD 368

Query: 2566 PLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQG 2387
            P PVD DLL A VPG+RRPFRLLPYGV PKLTNDEMT L+RLGRPLPCHFALGRNR LQG
Sbjct: 369  PQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQG 428

Query: 2386 LAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFL 2207
            LAAAI+KLWEKCEIAKIA+KRG QNTNSE+MA+ELK LTGG LLSRDREFIV YRGKDFL
Sbjct: 429  LAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFL 488

Query: 2206 PAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSE 2027
            P A S AIEERRK+E +       K  P +G N H+        E+     DQK  + SE
Sbjct: 489  PPAASCAIEERRKHEFST--SNDSKEEPELG-NRHDNSGDNTQDEFGCT-NDQKSTMHSE 544

Query: 2026 ERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLR 1847
            ++E +S E A+ RT+                      EE  +Q +VDKEGITE+E+YMLR
Sbjct: 545  QKERRSAEVAIRRTN-IRLSRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLR 603

Query: 1846 KIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGG 1667
            K+GL MK FLL+GRRGVF GTVENMHLHWK+RELVKII+  R +E     ARTLE ESGG
Sbjct: 604  KVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGG 663

Query: 1666 ILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLS 1487
            ILVAVERV+KGYAII+YRGKNY RPA LRP++LL KR+AMKRS+EAQRR+SLK+HVL+L+
Sbjct: 664  ILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELT 723

Query: 1486 QNIDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQSPVGS 1307
            +NI+ LKLQL K ++  +++    S   L  E E+ +MQ  E          C++S    
Sbjct: 724  RNIEKLKLQLVKDKEANSLETIDESILPLVKE-EIGDMQPAE----------CMRSDTSH 772

Query: 1306 ECNREVTGSHETDSASPKLNDASQSSLDFP---SPDFQTDITVYESAHLPKLDTEEKI-I 1139
            E N +  G    D  S + ND   +++D P     D QT+   +    + +++++  +  
Sbjct: 773  EVNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGISINEIESKSSLKS 832

Query: 1138 MNGESRVTSFS-------SDSSKTCRQTSL-----------------------SATSDAK 1049
            ++ ES++   +       +  + +C   S+                       S+   AK
Sbjct: 833  VSKESQLNMIADFFAEGVASGTSSCPDNSMQEVMEYNTIVDAEQCSSDNEPRESSIESAK 892

Query: 1048 PRLNDIKTMESSTDSPKSDSRLSVHTVTENGY---SSKAVRLPNKERLLLRKQALKMKKR 878
             R ++ + +E S +  K  S LS    T N +   +S+A++L N++RLLLRKQAL+MKKR
Sbjct: 893  SRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKR 952

Query: 877  PLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQE 698
            P+ A+G+SN + GVA+AIK HF +YPLAIVNVKGRAKGTSVQEVV KLEE TGAVLVSQE
Sbjct: 953  PVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQE 1012

Query: 697  PSKIILYRGWGSQEEPKSTKGKSKINSSPSAGMESKTRHVISPELISAIRLECGLQ 530
            PSK+ILYRGWG+++E  S +G+    + PS   + +    +S EL++AI+LECGLQ
Sbjct: 1013 PSKVILYRGWGAEDE-SSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQ 1067


>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 1053

 Score =  967 bits (2499), Expect = 0.0
 Identities = 558/1052 (53%), Positives = 699/1052 (66%), Gaps = 31/1052 (2%)
 Frame = -1

Query: 3592 RSPYTKTLFNPFSVPATFFIFPNRSSKFQ---HLQPRHLLCRKNSAVSPDADTRTLPQSA 3422
            R+  +  L +PFS   T  + P+ SS      H  P  L   +        D+ TLP+SA
Sbjct: 21   RASSSSPLHSPFST--TNSLHPSPSSHLTSTPHSSPVLLKSSRFLLRCCSIDSETLPKSA 78

Query: 3421 IQRIAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTP 3242
            IQRIA+KLRSLG+ E       +  +    S+PG IFVPLP QLPKYRVGHT DSSWSTP
Sbjct: 79   IQRIADKLRSLGFTEXTP---RTLPDPNSPSAPGAIFVPLPNQLPKYRVGHTIDSSWSTP 135

Query: 3241 ENPVPEPGSGNAIQRYHELRNVVIKEKIQE---RSKKKEYVPTLAELKLPQEELKRLRTX 3071
            ENPVPEPG+G AI+R+HELR  V K K ++     K++E  P+LAEL L +EEL RLRT 
Sbjct: 136  ENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAELSLTEEELGRLRTI 195

Query: 3070 XXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLV 2891
                          ITEGIVN IHE WR++E+VKI CED+CR+NM+RTHDLLERKTGG+V
Sbjct: 196  GIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACEDLCRLNMKRTHDLLERKTGGIV 255

Query: 2890 IWRSGSNIVLYRGADYKYPYFLSEECSRNVASEEVPHNHGT--------TAXXXXXXXXX 2735
            +WRSGS I+LYRG +Y YPYF  E      + + +P +H          +          
Sbjct: 256  VWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSDDGGNSETESTLSCINDERS 315

Query: 2734 XXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPV 2555
                   K+  P LIQGVG+PNRVRFQLPGEA+LAE+A+SLL GLGPRF+DWWGY+PLPV
Sbjct: 316  AGPTSYVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPV 375

Query: 2554 DGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAA 2375
            D DLLPA+VPG+R+PFRLLPYGV PKLTNDEMT L+RL RPLPCHFALGRNRKLQGLAA+
Sbjct: 376  DADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAAS 435

Query: 2374 IIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAV 2195
            II+LWEKCEIAKIA+KRGVQNTN++LMAEEL+LLTGG LLSRDREFIVLYRGKDFLP AV
Sbjct: 436  IIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAV 495

Query: 2194 SSAIEERRKYELANKRKGTDKNLPGVGEN-EHEQQTSGQVCEYEKNRKDQKFELSSEERE 2018
            SSA+E++R   L ++ K TD +    G+  + E   +G   E +     +K  + SE R+
Sbjct: 496  SSAMEQKRHMRL-HEMKQTDNSPATTGQGLKLEINENGPTNESQSITGWKK--IVSERRK 552

Query: 2017 LKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEIS-QQPDVDKEGITEDEKYMLRKI 1841
            L S+E ++ +TS                      EE   QQP++DKEGIT +E+YML+K+
Sbjct: 553  LMSSETSMRKTSIKLSIVCIRKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKV 612

Query: 1840 GLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGIL 1661
            GL MKPFLLLGRRGVF GTVENMHLHWKYRELVKIIT  RS + VH VARTLEAESGGIL
Sbjct: 613  GLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGIL 672

Query: 1660 VAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQN 1481
            VAVERV + +AII++RGKNY RP+ LRP+SLLNK++A+KRSIEAQRR+SLK+HVLKL+QN
Sbjct: 673  VAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQN 732

Query: 1480 IDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQSPVGSEC 1301
            +++LKL+L + +    M+  K S  Q G E  + E+Q+T GS  +V   +C+     S C
Sbjct: 733  VEELKLKLDEDKRAIGMESIKTSTFQPGKE-GIDEIQTT-GSLKLVADSACLTHAENSTC 790

Query: 1300 NRE-----VTGSHETDSASPKLNDASQSSLDFPSPDF------QTDITVYESAHLPKLDT 1154
              E     V   H T S+     D S + L   +  F      Q++ TV  S    +   
Sbjct: 791  LEENEVAKVKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNATVRPSFESVRQGN 850

Query: 1153 EEKIIMNGESRVTSFSSDS-SKTCRQTSLSATSDAKPRLNDIKTMESST--DSPKSDSRL 983
              K+ M+  +   +    S + +    S S TSDA   +   K  + S   +  KS   L
Sbjct: 851  HAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHVAMNKDTKPSVRLEEEKSPPLL 910

Query: 982  SVHTVTENGY-SSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRR 806
            S   + + GY  +   +L NKERLLLR+QALKMKK P+ ++GKSN I GVA+AIK HF++
Sbjct: 911  SSTRINQPGYFPANVPQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKK 970

Query: 805  YPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSK 626
            + LAIVNVKGRAKGTSVQE+V KLE+ TGAVLVSQEPSK+ILYRGW  +EE +  K    
Sbjct: 971  HSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRGW--EEEDRKQKATMM 1028

Query: 625  INSSPSAGMESKTRHVISPELISAIRLECGLQ 530
             NS        + R  +S EL++AIR+ECGL+
Sbjct: 1029 KNS-------GEDRLSMSSELMAAIRIECGLR 1053


>ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Capsella rubella]
            gi|482565458|gb|EOA29647.1| hypothetical protein
            CARUB_v10015149mg [Capsella rubella]
          Length = 1021

 Score =  962 bits (2488), Expect = 0.0
 Identities = 559/1043 (53%), Positives = 676/1043 (64%), Gaps = 18/1043 (1%)
 Frame = -1

Query: 3604 LFSFRSPYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAV--SPDADTRTLP 3431
            L +    +    F PF +P T             L  R  + R NS V  S  +D +TLP
Sbjct: 13   LITLPKTFPDRTFPPFPIPQT-------------LISRCNVRRANSFVVRSSSSDRKTLP 59

Query: 3430 QSAIQRIAEKLRSLGYVEDEKDKDSSTTNNK--GTSSPGEIFVPLPTQLPKYRVGHTFDS 3257
            QSAIQRIAEKLRSLG+VE+  +  +  T     G +SPGEIFVPLP QLP  RVGHT D+
Sbjct: 60   QSAIQRIAEKLRSLGFVEENHESPARNTTGVEYGKNSPGEIFVPLPKQLPINRVGHTIDT 119

Query: 3256 SWSTPENPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKLPQEELKRLR 3077
            SWSTP  PVP PGSG AI RYHEL+ V  KE   ER KK+E VP+LAEL LP  EL+RLR
Sbjct: 120  SWSTPSYPVPNPGSGTAISRYHELKRVWKKETEIER-KKQEKVPSLAELTLPAAELRRLR 178

Query: 3076 TXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGG 2897
            +               ITEGIVNGIHERWR TE+VKI CEDI RMNM+RTHD+LE KTGG
Sbjct: 179  SAGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIVCEDISRMNMKRTHDVLETKTGG 238

Query: 2896 LVIWRSGSNIVLYRGADYKYPYFLSEECSRNVASEEVPHNHGTT------AXXXXXXXXX 2735
            LVIWRSGS I+LYRG +Y+YPYF+S+    + +S E      +       +         
Sbjct: 239  LVIWRSGSKILLYRGVNYQYPYFVSDRDLGHDSSVETASGGSSMDQEVVDSRDKQSTAES 298

Query: 2734 XXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPV 2555
                  +K   P LIQGVGSP++VRFQLPGE QL EEAD LL GLGPRFTDWW Y+PLPV
Sbjct: 299  SSLSVTSKTVKPLLIQGVGSPDKVRFQLPGEVQLVEEADQLLEGLGPRFTDWWAYDPLPV 358

Query: 2554 DGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAA 2375
            DGDLLPAVVP +RRPFRLLPYGV+PKLT+DEMT ++RLGRPLPCHFALGRNR LQGLA A
Sbjct: 359  DGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVA 418

Query: 2374 IIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAV 2195
            I+KLWEKCE+AKIA+KRGVQNTNSELMAEELK LTGG L+SRD++FIVLYRGKDFLP AV
Sbjct: 419  IVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPFAV 478

Query: 2194 SSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYE--KNRKDQKFELSSEER 2021
            SSAIEERR+  +  +      N     E+  + Q +    E E  + +KD       + R
Sbjct: 479  SSAIEERRRQTMIMENSSAHGNKMTKNEDVIKPQAATDDTELEEAEYKKDHVQTHHMKSR 538

Query: 2020 ELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKI 1841
            + KS EA + +TS                    E+ E  QQ ++DKEGIT+DEKYMLRKI
Sbjct: 539  QRKSPEAILEKTSIKLSMALEKKANAEKILAELESRESPQQSNIDKEGITDDEKYMLRKI 598

Query: 1840 GLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGIL 1661
            GL MKPFLLLGRRGVF GT+ENMHLHWKYRELVKII    S+E  H VA  LEAESGGIL
Sbjct: 599  GLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEHSIEAAHEVAEILEAESGGIL 658

Query: 1660 VAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQN 1481
            VAVE VSKGYAIIVYRGKNY RP+ LRPQ+LL+KR+A+KRS+EAQRR+SLK+HVLKLS N
Sbjct: 659  VAVEMVSKGYAIIVYRGKNYERPSCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNN 718

Query: 1480 IDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQSPVGSEC 1301
            ID+L  QL        ++ +  +E +   E  M  ++ TE + L+    S  +  +G   
Sbjct: 719  IDELNRQL--------VEDSVTNETRSDGESSMRMVEETE-NQLIEPENSSEEIELGYSS 769

Query: 1300 NREVTGSHETDSASPKLNDASQSSLDFPSPDFQTDITVYESAHLPK-LDTEEKIIMNGES 1124
               V+ S E +      N+    S    S + Q D       H    LD+   I +  E+
Sbjct: 770  ELSVSSSGEENWEDD--NEGEVDSFTTSSHEHQEDEPGLSQRHEGNALDSTANISVLVET 827

Query: 1123 RVTSFSSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTENGYSSK 944
                 SS   ++  Q S   T    P+    + + SST    S SR+S  T  ++     
Sbjct: 828  GSAKASSFHDRSMPQKSFLHTERKVPK----QELGSSTG---SGSRVSALTERKSKNDGL 880

Query: 943  AVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKG 764
               L N+ERL+LRKQALKMKKRP FA+G+SN + G+A  +K HF++ PLAIVNVKGRA+G
Sbjct: 881  VADLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRAEG 940

Query: 763  TSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAGMESKTR 584
            TSVQEV+ KL+E TGA+LVSQEPSK+ILYRGWG++EE KS    S + +  S  + S   
Sbjct: 941  TSVQEVIAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNSNVKN--SINLTSSKS 998

Query: 583  HV-----ISPELISAIRLECGLQ 530
             V     +SP LI AIRLECGLQ
Sbjct: 999  FVDDPPPVSPALIEAIRLECGLQ 1021


>ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|22531018|gb|AAM97013.1|
            unknown protein [Arabidopsis thaliana]
            gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis
            thaliana] gi|332640136|gb|AEE73657.1| CRM family member 2
            [Arabidopsis thaliana]
          Length = 1011

 Score =  962 bits (2486), Expect = 0.0
 Identities = 562/1049 (53%), Positives = 675/1049 (64%), Gaps = 16/1049 (1%)
 Frame = -1

Query: 3631 MLLSPGNDQLFSFRSPYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAV--S 3458
            MLL   + Q       +   +F PF VP T             L  R  + R NS +  S
Sbjct: 1    MLLPLFHQQPLILAKTFPDRIFPPFLVPNT-------------LVSRRNVSRANSGIFCS 47

Query: 3457 PDADTRTLPQSAIQRIAEKLRSLGYVEDEKDKDSS--TTNNKGTSSPGEIFVPLPTQLPK 3284
              +  +TLPQSAIQRIAEKLRSLG+VE++ D  +   T    G +SPGEIFVPLP QLP 
Sbjct: 48   SASGRKTLPQSAIQRIAEKLRSLGFVEEKHDSPTRRITGEESGKNSPGEIFVPLPKQLPI 107

Query: 3283 YRVGHTFDSSWSTPENPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKL 3104
            +RVGHT D+SWSTP  PVP+PGSG AI RYHEL+ V  KE   ER KK+E VP+LAEL L
Sbjct: 108  HRVGHTIDTSWSTPSYPVPKPGSGTAISRYHELKRVWKKETEMER-KKEEKVPSLAELTL 166

Query: 3103 PQEELKRLRTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTH 2924
            P  EL+RLRT               ITEGIVNGIHERWR TE+VKI CEDI RMNM+RTH
Sbjct: 167  PPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTH 226

Query: 2923 DLLERKTGGLVIWRSGSNIVLYRGADYKYPYFLSE-ECSRNVASEEVPHNHGTT-AXXXX 2750
            D+LE KTGGLVIWRSGS I+LYRG +Y+YPYF+S+ + +   AS     + G   +    
Sbjct: 227  DVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVSDRDLAHEAASGASSMDQGVVDSREKQ 286

Query: 2749 XXXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGY 2570
                       NK+  P L QGVGSP++VRFQLPGE QL EEAD LL GLGPRFTDWW Y
Sbjct: 287  SIAESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAY 346

Query: 2569 EPLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQ 2390
            +PLPVDGDLLPAVVP +RRPFRLLPYGV+PKLT+DEMT ++RLGRPLPCHFALGRNR LQ
Sbjct: 347  DPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQ 406

Query: 2389 GLAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDF 2210
            GLA AI+KLWEKCE+AKIA+KRGVQNTNSELMAEELK LTGG L+SRD++FIVLYRGKDF
Sbjct: 407  GLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDF 466

Query: 2209 LPAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSS 2030
            LP+AVSSAIEERR+  +  +      N   + ENE E +      + E   KDQK  + +
Sbjct: 467  LPSAVSSAIEERRRQTMIMENSSVHGN--KLTENEEEIKPRAVKEDIELEAKDQKDHIQT 524

Query: 2029 EE---RELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEK 1859
             +   R+  S EA + +TS                    EN E  Q  D+DKEGIT DEK
Sbjct: 525  HQMKSRQRNSPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDKEGITNDEK 584

Query: 1858 YMLRKIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEA 1679
            YMLRKIGL MKPFLLLGRRGVF GT+ENMHLHWKYRELVKII    S+E  H VA  LEA
Sbjct: 585  YMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEA 644

Query: 1678 ESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHV 1499
            ESGGILVAVE VSKGYAIIVYRGKNY RP  LRPQ+LL+KR+A+KRS+EAQRR+SLK+HV
Sbjct: 645  ESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHV 704

Query: 1498 LKLSQNIDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQS 1319
            LKLS NI++L  QL   ED    +     E      +E  E Q TE        E    S
Sbjct: 705  LKLSNNIEELNRQL--VEDSATNETWSDGESSNMMVEEETENQHTEPEKAREKIELGYSS 762

Query: 1318 PVGSECNREVTGSHETDSASPKLNDASQSSLDFPSPDFQTDITVYESAHLPK---LDTEE 1148
             +    + E     +++     L  +SQ        ++Q D +   S+   +   LD+  
Sbjct: 763  DLSVPSSGEENWEDDSEGEVDPLTTSSQ--------EYQEDESESASSQRHEGNSLDSTA 814

Query: 1147 KIIMNGESRVTSFSSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTV 968
             + +  E+   + SS   ++    S          LN  + +  S  S  S S++S    
Sbjct: 815  NLSVFAETGSANASSFHDRSLPHNSF---------LNANRKLPGS--STGSGSQISALRE 863

Query: 967  TENGYSSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIV 788
             ++        L N+ERL+LRKQALKMKKRP FA+G+SN + G+A  +K HF++ PLAIV
Sbjct: 864  RKSENDGLVTDLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIV 923

Query: 787  NVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKS----TKGKSKIN 620
            NVKGRA GTSVQEV+ KL+E TGA+LVSQEPSK+ILYRGWG++EE KS       KS IN
Sbjct: 924  NVKGRANGTSVQEVIAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNNNVKSSIN 983

Query: 619  SSPSAGMESKTRHVISPELISAIRLECGL 533
               +        HV SP LI AIRLECGL
Sbjct: 984  LPSTRSFVDDPPHV-SPALIEAIRLECGL 1011


>ref|XP_006408495.1| hypothetical protein EUTSA_v10019986mg [Eutrema salsugineum]
            gi|557109641|gb|ESQ49948.1| hypothetical protein
            EUTSA_v10019986mg [Eutrema salsugineum]
          Length = 998

 Score =  956 bits (2472), Expect = 0.0
 Identities = 553/1031 (53%), Positives = 668/1031 (64%), Gaps = 18/1031 (1%)
 Frame = -1

Query: 3571 LFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAVSPDA-DTRTLPQSAIQRIAEKLR 3395
            +F PF VP T             L  R  + R NS V   A D +TLPQSAIQRIA+KLR
Sbjct: 24   VFPPFLVPKT-------------LISRCHVRRANSVVRSSASDRKTLPQSAIQRIADKLR 70

Query: 3394 SLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWSTPENPVPEPGS 3215
            SLG+ E++ D   +T    G +SPGEIFVPLP QLP +RVGHT D+SWSTP  PVP+PGS
Sbjct: 71   SLGFAEEKHDT-KTTGEESGNNSPGEIFVPLPNQLPIHRVGHTIDTSWSTPSYPVPKPGS 129

Query: 3214 GNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKLPQEELKRLRTXXXXXXXXXXXXX 3035
            G AI RYHEL+ V  KEK  ER K +E VP+LAEL LP  EL+RLR+             
Sbjct: 130  GTAISRYHELKRVWKKEKKVER-KNEEKVPSLAELTLPPAELRRLRSAGIRLTKKLKIGK 188

Query: 3034 XXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTGGLVIWRSGSNIVLYR 2855
              ITEGIVNGIHERWR TE+VKI CEDI RMNM+RTHD+LE KTGGLVIWRSGS I+LYR
Sbjct: 189  AGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVIWRSGSKILLYR 248

Query: 2854 GADYKYPYFLSEECSRNVASEEVPHNHGTT------AXXXXXXXXXXXXXXXNKVSHPPL 2693
            G +Y+YPYF+S++   + +S E      +       +               NK+  P L
Sbjct: 249  GVNYQYPYFVSDQDLAHDSSVETASGASSMIQGVVDSRDKQSTAQSSPTSISNKMIKPLL 308

Query: 2692 IQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGDLLPAVVPGFRR 2513
            +QGVGSP++VRFQLPGE QL EEAD LL GLGPRFTDWW Y+PLPVD DLLPA+VP +RR
Sbjct: 309  MQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAYDPLPVDADLLPAIVPEYRR 368

Query: 2512 PFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIKLWEKCEIAKIA 2333
            PFRLLPYG++PKLT+DEMT L+RLGRPLPCHFALGRNR LQGLA AI+KLWEKCE+ KIA
Sbjct: 369  PFRLLPYGLSPKLTDDEMTTLRRLGRPLPCHFALGRNRNLQGLAVAIVKLWEKCEVVKIA 428

Query: 2332 IKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSAIEERRKYELAN 2153
            +KRGVQNTNSELMAEELK LTGG L+SRD++FIVLYRGKDFLP+AVSSAIEERR+  +  
Sbjct: 429  VKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPSAVSSAIEERRRQTMIM 488

Query: 2152 KRKGTDKNLPGVGENEHEQQTSGQVCEYE---KNRKDQKFELSSEERELKSTEAAVGRTS 1982
            ++     N   + +NE E Q      + E   + +KD       + R+ KS EA++ RTS
Sbjct: 489  EKSSVHGN--KLTKNEKEIQPQAPTDDIEPAAEYKKDHVQTHQMKPRQRKSPEASLERTS 546

Query: 1981 XXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTMKPFLLLGRR 1802
                                EN E  QQ D+DKEGIT+DEKYMLRKIGL MKPFLLLGRR
Sbjct: 547  IKLSMALEKKANAEKILAELENRESPQQSDIDKEGITDDEKYMLRKIGLKMKPFLLLGRR 606

Query: 1801 GVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVERVSKGYAII 1622
            GVF GT+ENMHLHWKYRELVKII   +S+E    VA  LEAESGGILVAVE VSKGYAII
Sbjct: 607  GVFDGTIENMHLHWKYRELVKIICNEKSIESAREVAEILEAESGGILVAVEMVSKGYAII 666

Query: 1621 VYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDLKLQLGKHED 1442
            VYRGKNY RP  LRPQ+LL+KR+A+KRS+EAQRR+SLK+HVLKLS NI++L  QL K   
Sbjct: 667  VYRGKNYERPPCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSDNIEELNRQLVKDSA 726

Query: 1441 GGNMDLAKASEHQLGNEQEMHEM----QSTEGSALVVTTESCVQSPVGSECNREVTGSHE 1274
                     S +++  E+  ++      S++   L    ESC                 E
Sbjct: 727  TNATWSDGESSNRMFQEETANQQIELGNSSDPRVLSSGEESC-----------------E 769

Query: 1273 TDSASPKLNDASQSSLDFPSPDFQTDITVYESAHLPKLDTEEKIIMNGESRVTSFSSDSS 1094
             DS+     D S S                   H   LD+   +   G +  +SF   S 
Sbjct: 770  DDSSHEDREDESGSG--------------SSQRHGNSLDSTAVLGETGSAEASSFHDRSM 815

Query: 1093 KTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTENGYSSKAVRLPNKERL 914
               R + L+A          + T +    S  S SR+S  T +++        L N+ERL
Sbjct: 816  P--RNSFLNAE-------RKVPTGQELGFSTGSGSRISALTESKSEKDGLVADLSNRERL 866

Query: 913  LLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKGRAKGTSVQEVVLKL 734
            +LRKQALKMKKRP FA+G+SN + G+A+ +K HF R PLAIVNVKGRAKGTSVQEV+ KL
Sbjct: 867  ILRKQALKMKKRPPFAVGRSNVVTGLAKTLKIHFERNPLAIVNVKGRAKGTSVQEVIAKL 926

Query: 733  EEVTGAVLVSQEPSKIILYRGWGSQEEPKS----TKGKSKINSSPSAGMESKTRHVISPE 566
            +E TGA+LVSQEPSK+ILYRGWG++EE KS       K+ IN +  +    K    +SP 
Sbjct: 927  KEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNNNVKNSINLTSHSKRFVKDPPPVSPA 986

Query: 565  LISAIRLECGL 533
            LI AI+LECGL
Sbjct: 987  LIQAIKLECGL 997


>gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]
          Length = 1020

 Score =  955 bits (2469), Expect = 0.0
 Identities = 562/1058 (53%), Positives = 676/1058 (63%), Gaps = 25/1058 (2%)
 Frame = -1

Query: 3631 MLLSPGNDQLFSFRSPYTKTLFNPFSVPATFFIFPNRSSKFQHLQPRHLLCRKNSAV--S 3458
            MLL   + Q       +   +F PF VP T             L  R  + R NS +  S
Sbjct: 1    MLLPLFHQQPLILAKTFPDRIFPPFLVPNT-------------LVSRRNVSRANSGIFCS 47

Query: 3457 PDADTRTLPQSAIQRIAEKLRSLGYVEDEKDKDSS--TTNNKGTSSPGEIFVPLPTQLPK 3284
              +  +TLPQSAIQRIAEKLRSLG+VE++ D  +   T    G +SPGEIFVPLP QLP 
Sbjct: 48   SASGRKTLPQSAIQRIAEKLRSLGFVEEKHDSPTRRITGEESGKNSPGEIFVPLPKQLPI 107

Query: 3283 YRVGHTFDSSWSTPENPVPEPGSGNAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKL 3104
            +RVGHT D+SWSTP  PVP+PGSG AI RYHEL+ V  KE   ER KK+E VP+LAEL L
Sbjct: 108  HRVGHTIDTSWSTPSYPVPKPGSGTAISRYHELKRVWKKETEMER-KKEEKVPSLAELTL 166

Query: 3103 PQEELKRLRTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTH 2924
            P  EL+RLRT               ITEGIVNGIHERWR TE+VKI CEDI RMNM+RTH
Sbjct: 167  PPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTH 226

Query: 2923 DLLERKTGGLVIWRSGSNIVLYRGADYKYPYFLSE-ECSRNVASEEVPHNHGTT-AXXXX 2750
            D+LE KTGGLVIWRSGS I+LYRG +Y+YPYF+S+ + +   AS     + G   +    
Sbjct: 227  DVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVSDRDLAHEAASGASSMDQGVVDSREKQ 286

Query: 2749 XXXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGY 2570
                       NK+  P L QGVGSP++VRFQLPGE QL EEAD LL GLGPRFTDWW Y
Sbjct: 287  SIAESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAY 346

Query: 2569 EPLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQ 2390
            +PLPVDGDLLPAVVP +RRPFRLLPYGV+PKLT+DEMT ++RLGRPLPCHFALGRNR LQ
Sbjct: 347  DPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQ 406

Query: 2389 GLAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKL---------LTGGILLSRDREF 2237
            GLA AI+KLWEKCE+AKIA+KRGVQNTNSELMAEELK+         LTGG L+SRD++F
Sbjct: 407  GLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKVVGLLLVIKWLTGGTLISRDKDF 466

Query: 2236 IVLYRGKDFLPAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNR 2057
            IVLYRGKDFLP+AVSSAIEERR+  +  +      N   + ENE E +      + E   
Sbjct: 467  IVLYRGKDFLPSAVSSAIEERRRQTMIMENSSVHGN--KLTENEEEIKPRAVKEDIELEA 524

Query: 2056 KDQKFELSSEE---RELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVD 1886
            KDQK  + + +   R+  S EA + +TS                    EN E  Q  D+D
Sbjct: 525  KDQKDHIQTHQMKSRQRNSPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDID 584

Query: 1885 KEGITEDEKYMLRKIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEV 1706
            KEGIT DEKYMLRKIGL MKPFLLLGRRGVF GT+ENMHLHWKYRELVKII    S+E  
Sbjct: 585  KEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAA 644

Query: 1705 HVVARTLEAESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQ 1526
            H VA  LEAESGGILVAVE VSKGYAIIVYRGKNY RP  LRPQ+LL+KR+A+KRS+EAQ
Sbjct: 645  HKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQ 704

Query: 1525 RRESLKVHVLKLSQNIDDLKLQLGKHEDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALV 1346
            RR+SLK+HVLKLS NI++L  QL   ED    +     E      +E  E Q TE     
Sbjct: 705  RRKSLKLHVLKLSNNIEELNRQL--VEDSATNETWSDGESSNMMVEEETENQHTEPEKAR 762

Query: 1345 VTTESCVQSPVGSECNREVTGSHETDSASPKLNDASQSSLDFPSPDFQTDITVYESAHLP 1166
               E    S +    + E     +++     L  +SQ        ++Q D +   S+   
Sbjct: 763  EKIELGYSSDLSVPSSGEENWEDDSEGEVDPLTTSSQ--------EYQEDESESASSQRH 814

Query: 1165 K---LDTEEKIIMNGESRVTSFSSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKS 995
            +   LD+   + +  E+   + SS   ++    S          LN  + +  S  S  S
Sbjct: 815  EGNSLDSTANLSVFAETGSANASSFHDRSLPHNSF---------LNANRKLPGS--STGS 863

Query: 994  DSRLSVHTVTENGYSSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTH 815
             S++S     ++        L N+ERL+LRKQALKMKKRP FA+G+SN + G+A  +K H
Sbjct: 864  GSQISALRERKSENDGLVTDLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMH 923

Query: 814  FRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKS--- 644
            F++ PLAIVNVKGRA GTSVQEV+ KL+E TGA+LVSQEPSK+ILYRGWG++EE KS   
Sbjct: 924  FQKNPLAIVNVKGRANGTSVQEVIAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYP 983

Query: 643  -TKGKSKINSSPSAGMESKTRHVISPELISAIRLECGL 533
                KS IN   +        HV SP LI AIRLECGL
Sbjct: 984  NNNVKSSINLPSTRSFVDDPPHV-SPALIEAIRLECGL 1020


>ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citrus clementina]
            gi|557533064|gb|ESR44247.1| hypothetical protein
            CICLE_v10013715mg [Citrus clementina]
          Length = 1062

 Score =  952 bits (2461), Expect = 0.0
 Identities = 549/1063 (51%), Positives = 696/1063 (65%), Gaps = 51/1063 (4%)
 Frame = -1

Query: 3565 NPFSVPAT-------FFIFPNRSSKFQHLQPRHLLCRKNSAVSPDADTRTLPQ----SAI 3419
            NP  +P T       FF F    S     +P   +   +   +P   + T  Q    SAI
Sbjct: 9    NPILLPKTLTNSSSPFFTFHKTLSLQNPEKPSIFVISCSKTQNPLTQSETRVQNDTTSAI 68

Query: 3418 QRIAEKLRSLGYVEDEKDKDSSTT---NNKGTSSPGEIFVPLPTQLPKYRVGHTFDSSWS 3248
            QRIA+KLRSLG VE    KD +       + T + GEIF+PLP ++PKYRVGHT D SWS
Sbjct: 69   QRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPLPHRIPKYRVGHTIDDSWS 128

Query: 3247 TPENPVPEPGSGNAIQRYHELRNVVIKEK-IQERSK---KKEYVPTLAELKLPQEELKRL 3080
            TPENPVP PG+G AI RY++L   V ++K + + SK   K++ VPTLAELKL  +EL+RL
Sbjct: 129  TPENPVPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEKEVPTLAELKLSGKELRRL 188

Query: 3079 RTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLERKTG 2900
            RT               ITEGIVNGIHERWR  E+VKI CED+CR+NM+RTHD LERKTG
Sbjct: 189  RTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTG 248

Query: 2899 GLVIWRSGSNIVLYRGADYKYPYFLSEECSRNVAS-EEVPH--------NHGTTAXXXXX 2747
            GLV+WRSGS I+LYRGADYKYPYFL++E S + AS +++P+        +   T      
Sbjct: 249  GLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQLVDDEGLDETKTHSSGAD 308

Query: 2746 XXXXXXXXXXNKVSHPPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYE 2567
                      NK     LI  VGSP+++R+QLPGEA+L EEAD LL GLGPRFTDWWGY+
Sbjct: 309  SAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYD 368

Query: 2566 PLPVDGDLLPAVVPGFRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQG 2387
            P PVD DLLPA VPG+RRPFRLLPYGV PKLTNDEMT L+RLGRPLPCHFALGRNR LQG
Sbjct: 369  PQPVDADLLPATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQG 428

Query: 2386 LAAAIIKLWEKCEIAKIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFL 2207
            LAAAI+KLWEKCEIAKIA+KRG QNTNSE+MA+ELK LTGG LLSRDREFIV YRGKDFL
Sbjct: 429  LAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFL 488

Query: 2206 PAAVSSAIEERRKYELANKRKGTDKNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSE 2027
            P A SSAIEERRK+E +       K  P +G N H+        E+     DQ   + SE
Sbjct: 489  PPAASSAIEERRKHEFST--SNDSKEEPELG-NRHDNSGDNTQDEFGCT-NDQTSTMHSE 544

Query: 2026 ERELKSTEAAVGRTSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLR 1847
            ++E +S E A+ RTS                      EE  +Q +VDKEGITE+E+YMLR
Sbjct: 545  QKERRSAEVAIRRTS-IRLSRALEKKAEAEKLLAELEEERPEQYEVDKEGITEEERYMLR 603

Query: 1846 KIGLTMKPFLLLGRRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGG 1667
            K+GL MK FLL+GRRGVF GTVENMHLHWK+RELVKII+  R +E     ARTLE ESGG
Sbjct: 604  KVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGG 663

Query: 1666 ILVAVERVSKGYAIIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLS 1487
            ILVAVERV+KGYAII+YRGKNY RPA LRP++LL KR+AMKRS+EAQRR+SLK+HVL+L+
Sbjct: 664  ILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELT 723

Query: 1486 QNIDDLKLQLGKHEDGGNMDLAKASEHQL-GNEQEMHEMQSTEGSALVVTTESCVQSPVG 1310
            +NI+ LKLQL K ++  +++    S   L G+   +   +S+    +V      +     
Sbjct: 724  RNIEKLKLQLVKDKEANSLETIDESILPLVGSIIFLMIWKSSNIPEIVFG----IFFKAR 779

Query: 1309 SECNREVTGSHETDSASPKLNDASQSSLDFP---SPDFQTDITVYESAHLPKLDTEEKI- 1142
             EC  ++T        S + ND   +++D P     D QT+   +      ++++E  + 
Sbjct: 780  GECGADLT--------STESNDTGDATIDGPPAIQQDKQTESLTHNGISFNEIESESSLK 831

Query: 1141 IMNGESRVTSFS-------SDSSKTCRQTSL---------SATSDAKPRLNDIKTMESST 1010
             ++ ES++   +       +  + +C   S+         S+   AK R ++ + +E   
Sbjct: 832  SVSKESQLNMIADFFAEGVASGTPSCPDNSMCSSDNEPRESSIESAKSRSSENEPIEQCF 891

Query: 1009 DSPKSDSRLSVHTVTENGY---SSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDG 839
            +  K  S LS    T N +   +S+A++L N++RLLLRKQAL+MKKRP+ A+G+SN + G
Sbjct: 892  ELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTG 951

Query: 838  VAEAIKTHFRRYPLAIVNVKGRAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQ 659
            VA+AIK HF +YPLAIVNVKGRAKGTSVQEVV KLEE TGAVLVSQEPSK+ILYRGWG++
Sbjct: 952  VAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAE 1011

Query: 658  EEPKSTKGKSKINSSPSAGMESKTRHVISPELISAIRLECGLQ 530
            +E  S +G+    +  S   + +    +S EL++AI+LECGLQ
Sbjct: 1012 DE-SSPRGRQNSRAKLSIVRDVRPWPAVSRELLAAIKLECGLQ 1053


>gb|EOY02281.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
          Length = 1087

 Score =  948 bits (2450), Expect = 0.0
 Identities = 539/1042 (51%), Positives = 690/1042 (66%), Gaps = 71/1042 (6%)
 Frame = -1

Query: 3442 RTLPQSAIQRIAEKLRSLGYVEDEKDKDSSTTNNKGTSSPGEIFVPLPTQLPKYRVGHTF 3263
            +TLPQSAIQRIA+KLRSLG+ E +  +  S   + G+ SPGEIFVPLP ++PKYRVGHT 
Sbjct: 55   QTLPQSAIQRIADKLRSLGFSETQNPEPESEPGS-GSDSPGEIFVPLPEKIPKYRVGHTI 113

Query: 3262 DSSWSTPENPVPEPGSG--NAIQRYHELRNVVIKEKIQERSKKKEYVPTLAELKLPQEEL 3089
            D+SWSTPENPVP+PGSG  + + R+ E++    + K+    ++   VP+LAELKL   EL
Sbjct: 114  DTSWSTPENPVPDPGSGPGSLMARFREMKRE--RRKVGRVKEEDRAVPSLAELKLSAAEL 171

Query: 3088 KRLRTXXXXXXXXXXXXXXXITEGIVNGIHERWRQTELVKINCEDICRMNMRRTHDLLE- 2912
            +RLRT               ITEGIVNGIHERWR++E+VKI CEDIC+MNM+RTH++LE 
Sbjct: 172  RRLRTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEVLEV 231

Query: 2911 -----------------------------------------RKTGGLVIWRSGSNIVLYR 2855
                                                     RKTGGLV+WRSGS I+LYR
Sbjct: 232  CSLIWLFSLLLELFFFIALSMIDEEMRLIKVGLWLKKKLQMRKTGGLVVWRSGSKIILYR 291

Query: 2854 GADYKYPYFLSEECSRNVAS---------EEVPHNHGTTAXXXXXXXXXXXXXXXNKVSH 2702
            GA+Y+YPYFL+++ + +  S         + V  +   +                NK++ 
Sbjct: 292  GANYRYPYFLADKIATDDTSSNASPDTNMDNVELHETESCSSEINSAKTAIPNATNKMTK 351

Query: 2701 PPLIQGVGSPNRVRFQLPGEAQLAEEADSLLAGLGPRFTDWWGYEPLPVDGDLLPAVVPG 2522
            P ++QGVGSP+RVRFQLPGEA+L EEA+ LL GLGPRFTDWWGYEPLPVDGDLLPA++PG
Sbjct: 352  PMIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPG 411

Query: 2521 FRRPFRLLPYGVNPKLTNDEMTILKRLGRPLPCHFALGRNRKLQGLAAAIIKLWEKCEIA 2342
            +RRPFRLLPYGV P LTNDEMT L+RLGRPLPCHF LGRNRKLQGLAA+I+K WEKCEIA
Sbjct: 412  YRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAASIVKHWEKCEIA 471

Query: 2341 KIAIKRGVQNTNSELMAEELKLLTGGILLSRDREFIVLYRGKDFLPAAVSSAIEERRKYE 2162
            K+A+KRGVQNTNSELMAEELK LTGG LLSRD++FIVLYRGKDFLP+AVSSAIEERR++ 
Sbjct: 472  KVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRRHV 531

Query: 2161 LANKRKGTD--KNLPGVGENEHEQQTSGQVCEYEKNRKDQKFELSSEERELKSTEAAVGR 1988
            +  +++G +  K+     E   E   SG   +   + KDQ+     + + +KS EAA+ +
Sbjct: 532  IHVEKQGAECSKSKKTAQEVIVEDTKSGSESKI-NSAKDQRSNFFGDPKNMKSAEAAIRK 590

Query: 1987 TSXXXXXXXXXXXXXXXXXXXXENEEISQQPDVDKEGITEDEKYMLRKIGLTMKPFLLLG 1808
            T                     E  EI QQ ++DKEGIT++E+YMLRK+GL MKPFLLLG
Sbjct: 591  TDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLG 650

Query: 1807 RRGVFAGTVENMHLHWKYRELVKIITGGRSMEEVHVVARTLEAESGGILVAVERVSKGYA 1628
            RRGVF GTVENMHLHWKYRELVKII+   ++E VH +AR LEAESGGILVAVERVSKGYA
Sbjct: 651  RRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAVERVSKGYA 710

Query: 1627 IIVYRGKNYTRPASLRPQSLLNKRQAMKRSIEAQRRESLKVHVLKLSQNIDDLKLQLGKH 1448
            IIVYRGKNY RP SLRPQ+LL KRQAMKRS+E QRR+SLK+H+L L++N++DL+ QL   
Sbjct: 711  IIVYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQLVVD 770

Query: 1447 EDGGNMDLAKASEHQLGNEQEMHEMQSTEGSALVVTTESCVQSPVGSECNREVTGSHETD 1268
            ++  +M   + S   L  E E+  +QS E +  V+    C  S  G   +R+  GS  T 
Sbjct: 771  KEANSMQTVEQSSLPLVQE-ELETLQSVEYTGSVI---ECPASSGGHVESRDKDGSESTS 826

Query: 1267 SASPKLNDASQSSLDFPS-PDFQTDITVYESAHLPKLDTE-EKIIMNGESRVTSF----- 1109
              + K+   +  S+  PS  +F    ++++     K ++E     +N +S  T       
Sbjct: 827  MKNDKM--VATISIRQPSKQEFMEPSSIHDGFENHKTESEFSAESVNRKSHATELRALHT 884

Query: 1108 ------SSDSSKTCRQTSLSATSDAKPRLNDIKTMESSTDSPKSDSRLSVHTVTE---NG 956
                  +S       +   S   +A+  +++   MES  +S  S   +S+ +  E   N 
Sbjct: 885  QVEMVDTSYPDNLMEEIDDSGAINAEHGVSNNGPMESLVES-ASMLDVSISSAVENVSNK 943

Query: 955  YSSKAVRLPNKERLLLRKQALKMKKRPLFAIGKSNQIDGVAEAIKTHFRRYPLAIVNVKG 776
             +S A  L NK+RLLLRKQALKMKKRP+ A+G+SN + GVA+AI+ HF+++PLAIVNVKG
Sbjct: 944  MASTANFLSNKDRLLLRKQALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKG 1003

Query: 775  RAKGTSVQEVVLKLEEVTGAVLVSQEPSKIILYRGWGSQEEPKSTKGKSKINSSPSAGME 596
            RAKGTSVQEVVLKL+E TGAVLVSQEPSK+ILYRGWG+ +E      ++  +S       
Sbjct: 1004 RAKGTSVQEVVLKLQEATGAVLVSQEPSKVILYRGWGAGDELGRGDNRNAKDSL------ 1057

Query: 595  SKTRHVISPELISAIRLECGLQ 530
            ++ R  +SPELI+AIRLECGLQ
Sbjct: 1058 AQNRPAVSPELIAAIRLECGLQ 1079


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