BLASTX nr result

ID: Catharanthus23_contig00004556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00004556
         (831 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243808.1| PREDICTED: uncharacterized protein LOC101263...    61   4e-07
emb|CAN73939.1| hypothetical protein VITISV_031601 [Vitis vinifera]    60   9e-07
ref|XP_006447342.1| hypothetical protein CICLE_v10017478mg [Citr...    59   2e-06
ref|XP_006357557.1| PREDICTED: uncharacterized protein LOC102592...    59   2e-06

>ref|XP_004243808.1| PREDICTED: uncharacterized protein LOC101263333 [Solanum
           lycopersicum]
          Length = 599

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 18/106 (16%)
 Frame = +3

Query: 435 TYDETNNDDH--DWHQNRDNRESEGVMIQPQTRKKNCY------YSRAR---------AM 563
           T D  N D +    +++  NR++E V+   +T     Y      Y RAR         AM
Sbjct: 478 TKDYINQDQNVESMNEHSVNRDTEEVLKSQETCDSTMYSTSRMTYQRARDENQAPYLRAM 537

Query: 564 TMPIQRPNGRISSENVHRSNSFPVEESERCN-SNRHVHPKLPDYDE 698
           T+PI+RP   +  +N  RS+SFPV+E E  +  NRHVHPKLP+YDE
Sbjct: 538 TLPIERPKDCLV-DNFLRSSSFPVQEPENGSYENRHVHPKLPNYDE 582



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
 Frame = +3

Query: 6   LEHVSSAGSSPEISPKLPKETIYLDDIQEFKSPVRKDQGSIVDQRLFMFKPSLLP---LI 176
           +E  ++  ++ E   +LP++ IYLDDIQEF+S V+KD     DQRLFMFK   +P    I
Sbjct: 263 VEKRAAESTTEEDLAELPEQLIYLDDIQEFESAVKKDM-DFEDQRLFMFKAPFVPSRLKI 321

Query: 177 DEDQE----QKRASYHEXXXXXXXXXXXXXXYAKRLRKRSVSIDITTIKDVECAIYYGD 341
           D   +    +K+                     KR R++S S    T+ D++  IYYGD
Sbjct: 322 DTRSKFKGIEKKFDSQNPKEGSKTSRKNRTISGKRTRRKSGS----TVSDIDSTIYYGD 376


>emb|CAN73939.1| hypothetical protein VITISV_031601 [Vitis vinifera]
          Length = 1452

 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 43/116 (37%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
 Frame = +3

Query: 24   AGSSPEISPKLPKE-TIYLDDIQEFKSPVRKDQGSIVDQRLFMFKPSLLP---LIDEDQE 191
            A SS E S + P+E  +YLDDI+EF+SP  KD  S  DQRLFMF    LP   + + D  
Sbjct: 1095 AKSSSESSYQFPEEEVVYLDDIEEFQSPRTKD-SSFQDQRLFMFNSFRLPKGEIFEADHN 1153

Query: 192  QKRASYHEXXXXXXXXXXXXXXYA--KRLRKRSVSIDITTIKDVECAIYYGDDVTS 353
            +     ++               A  K+LRKRS+  +   IKD+E  +YY     S
Sbjct: 1154 ESSIEQYDSWNKEGSGRSRKTEKAVRKKLRKRSMHQENQNIKDMEYEVYYDGSFNS 1209


>ref|XP_006447342.1| hypothetical protein CICLE_v10017478mg [Citrus clementina]
           gi|568877255|ref|XP_006491656.1| PREDICTED:
           uncharacterized protein LOC102625505 [Citrus sinensis]
           gi|557549953|gb|ESR60582.1| hypothetical protein
           CICLE_v10017478mg [Citrus clementina]
          Length = 663

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
 Frame = +3

Query: 18  SSAGSSPEISPKL-PKETIYLDDIQEFKSPVRKDQGSIVDQRLFMFKPSLLP---LIDED 185
           ++  SS E  P+   K  +YLD+I+E +S +RKD G   DQRLF FK S+LP     D  
Sbjct: 314 NNTASSLESLPQFHDKRLVYLDEIEELQSSMRKD-GDCQDQRLFKFKQSMLPKPDTADGC 372

Query: 186 QEQKRASYHEXXXXXXXXXXXXXXYA--KRLRKRSVSIDITTIKDVECAIYY 335
            E     Y                 A  K+ R+RS+S + + IKD+EC IYY
Sbjct: 373 NESYTGQYESFSKKSSSRSSRKTVTASGKQPRRRSLSQESSGIKDIECEIYY 424


>ref|XP_006357557.1| PREDICTED: uncharacterized protein LOC102592265 [Solanum tuberosum]
          Length = 601

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
 Frame = +3

Query: 6   LEHVSSAGSSPEISPKLPKETIYLDDIQEFKSPVRKDQGSIVDQRLFMFKPSLLP---LI 176
           +E  ++  S+ E S  LP++ IYLDDIQEF+S V+KD  +  DQRLFMFK   +P    I
Sbjct: 270 VERRAAESSTEEDSAVLPEQMIYLDDIQEFESAVKKDV-NFEDQRLFMFKAPFVPSRLKI 328

Query: 177 DEDQE----QKRASYHEXXXXXXXXXXXXXXYAKRLRKRSVSIDITTIKDVECAIYYGD 341
           D  ++    +K+                     KR R +S SI    + D++  IYYGD
Sbjct: 329 DARRKFEGIEKKFESPNAKERSKTSRKNRTISGKRTRGKSGSI----VSDIDSTIYYGD 383


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