BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00004355
         (1769 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   389   e-105
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   359   2e-96
gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma c...   353   1e-94
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   349   2e-93
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   349   2e-93
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309...   348   3e-93
gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus pe...   347   1e-92
gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma c...   345   3e-92
gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Th...   345   3e-92
gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma c...   345   3e-92
gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma c...   345   3e-92
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   345   4e-92
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s...   345   5e-92
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   342   4e-91
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   341   5e-91
ref|XP_002312652.1| RNA recognition motif-containing family prot...   303   2e-79
gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlise...   283   2e-73
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu...   261   7e-67
ref|XP_002315647.1| RNA recognition motif-containing family prot...   261   7e-67
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A...   256   2e-65

>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Solanum tuberosum]
            gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185-like
            isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  389 bits (999), Expect = e-105
 Identities = 199/353 (56%), Positives = 238/353 (67%), Gaps = 2/353 (0%)
 Frame = +2

Query: 119  MVPMADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQ 298
            M P ADEQ+D+G+E+YGG+ K +YHG G I ALAEDEM+               GEGFLQ
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60

Query: 299  MQRNQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQK 478
            +QR++  +      N  FQ  K SFP SRA      EA +PG  TE KY  + ++FP+QK
Sbjct: 61   LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQK 120

Query: 479  SGLAPNVGPPPTTDVSQKAQ--APEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLRKVPG 652
                         D +QKA+  A  MT  SQAGN  YQGS+ MPQK+G D +     +P 
Sbjct: 121  GEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPM----AMPE 176

Query: 653  PGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAMLFVG 832
               S   P +N      R +P MP NQ  SS N+N+N P+I+E   RP++ENGN MLFVG
Sbjct: 177  KNASEATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVG 236

Query: 833  ELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGMNGYH 1012
            ELHWWTTDAELESVLTQYG VKEIKFFDERASGKSKGYCQVEF++P +AAACKEGMNGY+
Sbjct: 237  ELHWWTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYN 296

Query: 1013 FNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            FNGRACVVAFATPQ+IKQM ++Y NKTQ Q QSQPQGR PM++  GRG G NY
Sbjct: 297  FNGRACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRG-GPNY 348



 Score =  176 bits (447), Expect = 2e-41
 Identities = 82/123 (66%), Positives = 88/123 (71%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            +MHPQ MMGPGFDP++M                M+PPF AVNPMGL GVAPHVNPAFFGR
Sbjct: 420  LMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHVNPAFFGR 479

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA+N             H GMWTD+S GGWGGEEHGRRTRESSYGGEDNASEYGYGE S
Sbjct: 480  GMAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVS 539

Query: 1760 HDK 1768
            HDK
Sbjct: 540  HDK 542


>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
            vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
            uncharacterized protein LOC100268141 isoform 2 [Vitis
            vinifera]
          Length = 647

 Score =  359 bits (921), Expect = 2e-96
 Identities = 198/355 (55%), Positives = 237/355 (66%), Gaps = 8/355 (2%)
 Frame = +2

Query: 128  MADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQMQR 307
            MA+EQ+D+ +E+YGG QK  + GGGAISALA+DE++               GEGFLQM R
Sbjct: 1    MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 308  NQASLTPTGGSNMG-FQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQKSG 484
            ++A   P+G    G FQ  KT  P  + EA       +PG   E KY  S   F E+K G
Sbjct: 61   SEAP-APSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKY--SNPHFHEKKEG 117

Query: 485  ----LAPNVGPPPTTD---VSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLRK 643
                  P +G     D   VSQK +  EMTH +Q  N+ +QGS  +PQK G +  D   K
Sbjct: 118  PMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGK 177

Query: 644  VPGPGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAML 823
            +     + + P LN G G  R +PQM  NQ     N+NVNRP++NENQIRPAV+NG  ML
Sbjct: 178  IA----NESTPVLNSGTGGPRAVPQMLSNQM--GMNVNVNRPMVNENQIRPAVDNGATML 231

Query: 824  FVGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGMN 1003
            FVGELHWWTTDAELESVL+QYG+VKEIKFFDERASGKSKGYCQVEFY+ +AAAACKEGMN
Sbjct: 232  FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMN 291

Query: 1004 GYHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTN 1168
            GY FNGRACVVAFA+PQ++KQM A+YMNKT  QAQSQ QGR PM+D  GRG G N
Sbjct: 292  GYIFNGRACVVAFASPQTLKQMGASYMNKT--QAQSQSQGRRPMNDGVGRGGGMN 344



 Score =  174 bits (440), Expect = 1e-40
 Identities = 80/123 (65%), Positives = 88/123 (71%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            +MHPQ MMG GFDPTYM                M+P FPAVN MGLAGVAPHVNPAFFGR
Sbjct: 419  LMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGR 478

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA+N             HAGMWTD+SMGGWGGEEHGRRTRESSYGG+D AS+YGYGE +
Sbjct: 479  GMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVN 538

Query: 1760 HDK 1768
            H+K
Sbjct: 539  HEK 541


>gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708838|gb|EOY00735.1| RNA-binding family protein
            isoform 1 [Theobroma cacao]
          Length = 653

 Score =  353 bits (906), Expect = 1e-94
 Identities = 188/357 (52%), Positives = 233/357 (65%), Gaps = 6/357 (1%)
 Frame = +2

Query: 119  MVPMADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQ 298
            M  MA+EQIDFG+E+YGG QK +Y G GAI ALA++EM+               GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 299  MQRNQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQK 478
            +QR++A   P G  + G Q  K   PE R EA      ++PG   + K+++   R+PEQ 
Sbjct: 61   LQRSEAPPQPGGMGSTGLQAQKNEAPEPRGEAGGSQGLNIPGVSVQGKHLNVTARYPEQD 120

Query: 479  SGLA---PNVGP---PPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLR 640
               A   P +G    P  T +SQK +  E T  +Q  NM +QG      KVG D     +
Sbjct: 121  GQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVPQ 180

Query: 641  KVPGPGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAM 820
            K+     +    SLN G G  +G P +P NQ      +NVN P+I+ENQ+RP +ENG  M
Sbjct: 181  KIA----NVPAQSLNSGTGGPQGAPHVPPNQM----GLNVNHPMISENQVRPPIENGPTM 232

Query: 821  LFVGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGM 1000
            LFVGELHWWTTDAELESVL+QYG+VKEIKFFDERASGKSKGYCQVEFY+P +AAACKEGM
Sbjct: 233  LFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGM 292

Query: 1001 NGYHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            +GY FNGRACVVAFA+PQ++KQM A+YMNK Q Q+Q+QPQGR P +D  GRG   NY
Sbjct: 293  DGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNY 348



 Score =  172 bits (437), Expect = 3e-40
 Identities = 80/123 (65%), Positives = 87/123 (70%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MMHPQ MMG GFDPTYM                M+P FPAVN +GLAGVAPHVNPAFFGR
Sbjct: 423  MMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHVNPAFFGR 482

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA N             H GMWTD+SMGGWGG+EHGRRTRESSYGGED ASEYGYG+A+
Sbjct: 483  GMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 542

Query: 1760 HDK 1768
            H+K
Sbjct: 543  HEK 545


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  349 bits (896), Expect = 2e-93
 Identities = 187/358 (52%), Positives = 228/358 (63%), Gaps = 7/358 (1%)
 Frame = +2

Query: 119  MVPMADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQ 298
            M  MA+EQID+ EE+YGG QK +Y GGGAI ALA++E++               G+G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 299  MQRNQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQK 478
             Q+ +A     G  N   Q  KT  PE + +A +   ++VPG   E KY ++G  FP Q 
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 479  SGLA----PNVGP---PPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTL 637
                    PN+G    P    VSQK    E TH +   NM +QGS   P + G D  +  
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSN-- 178

Query: 638  RKVPGPGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNA 817
              +PG   +   P LNPGA   +G   +P NQ     NINVNR ++NENQIRP +ENG  
Sbjct: 179  --MPGRVANEPAPVLNPGAAGPQGA-LIPANQM--GVNINVNRAMVNENQIRPPLENGGT 233

Query: 818  MLFVGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEG 997
            MLFVGELHWWTTDAELESVL+QYG+VKEIKFFDERASGKSKGYCQVEF++  AAAACK+G
Sbjct: 234  MLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDG 293

Query: 998  MNGYHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            MNG+ FNGR CVVAFA+PQ++KQM A+YMNK Q Q QSQ QGR PM+D  GRG   NY
Sbjct: 294  MNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNY 351



 Score =  164 bits (415), Expect = 1e-37
 Identities = 80/123 (65%), Positives = 86/123 (69%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MMHPQ MMG GFDPTYM                M+P FPAVN MGLAGVAPHVNPAFF R
Sbjct: 428  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 486

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA+N             H GMWTDSSMGGW GEEHGRRTRESSYGG+D AS+YGYGEA+
Sbjct: 487  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEAN 546

Query: 1760 HDK 1768
            H+K
Sbjct: 547  HEK 549


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  349 bits (895), Expect = 2e-93
 Identities = 187/358 (52%), Positives = 228/358 (63%), Gaps = 7/358 (1%)
 Frame = +2

Query: 119  MVPMADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQ 298
            M  MA+EQID+ EE+YGG QK +Y GGGAI ALA++E++               G+G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 299  MQRNQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQK 478
             Q+ +A     G  N   Q  KT  PE + +A +   ++VPG   E KY ++G  FP Q 
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 479  SGLA----PNVGP---PPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTL 637
                    PN+G    P    VSQK    E TH +   NM +QGS   P + G D  +  
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSN-- 178

Query: 638  RKVPGPGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNA 817
              +PG   +   P LNPGA   +G   +P NQ     NINVNR ++NENQIRP +ENG  
Sbjct: 179  --MPGRVANEPAPVLNPGAAGPQGA-LIPANQM--GVNINVNRAMVNENQIRPPLENGGT 233

Query: 818  MLFVGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEG 997
            MLFVGELHWWTTDAELESVL+QYG+VKEIKFFDERASGKSKGYCQVEF++  AAAACK+G
Sbjct: 234  MLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDG 293

Query: 998  MNGYHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            MNG+ FNGR CVVAFA+PQ++KQM A+YMNK Q Q QSQ QGR PM+D  GRG   NY
Sbjct: 294  MNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNY 351



 Score =  164 bits (416), Expect = 9e-38
 Identities = 80/123 (65%), Positives = 86/123 (69%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MMHPQ MMG GFDPTYM                M+P FPAVN MGLAGVAPHVNPAFF R
Sbjct: 428  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 486

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA+N             H GMWTDSSMGGW GEEHGRRTRESSYGG+D AS+YGYGEA+
Sbjct: 487  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEAN 546

Query: 1760 HDK 1768
            H+K
Sbjct: 547  HEK 549


>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
            subsp. vesca]
          Length = 646

 Score =  348 bits (894), Expect = 3e-93
 Identities = 185/351 (52%), Positives = 227/351 (64%)
 Frame = +2

Query: 119  MVPMADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQ 298
            M PM +EQID+ EE+YGG QK +Y   GAI ALA++E +               GEGFLQ
Sbjct: 1    MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60

Query: 299  MQRNQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQK 478
            M R +  L P G  N G Q  K + PE R +     E   PG   E KY S     PEQK
Sbjct: 61   MHRPEPPLPPAGVGNGGLQAQKNNVPEQRVQGGASQEVKNPGFSVEGKYSS----VPEQK 116

Query: 479  SGLAPNVGPPPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLRKVPGPG 658
                 +V P      SQK +  EMTH +Q  NM +QG+  M   V  DS D   K+    
Sbjct: 117  DQPPVSVVPEMA---SQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIA--- 170

Query: 659  ESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAMLFVGEL 838
             +  +PS+N G+     + QMP NQ   +  INVNRP++NENQIRP VENG+A LFVGEL
Sbjct: 171  -NGPIPSMNSGSNGPPAVQQMPANQM--NMKINVNRPMVNENQIRPPVENGSATLFVGEL 227

Query: 839  HWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGMNGYHFN 1018
            HWWTTDAELE VL+Q+G++KEIKFFDERASGKSKGYCQV+FY+P AA+ACKEGM+GY FN
Sbjct: 228  HWWTTDAELEGVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFN 287

Query: 1019 GRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            GRACVVAFA+ Q++KQM  +Y+NK+Q Q Q+QPQGR PM+D AGRG   N+
Sbjct: 288  GRACVVAFASSQTLKQMGDSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNF 338



 Score =  147 bits (372), Expect = 1e-32
 Identities = 73/124 (58%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MM+   MMGPGFDPTYM                M+P FP VN MGLAGVAPHVNPAFFGR
Sbjct: 414  MMNAPGMMGPGFDPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPHVNPAFFGR 473

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYG-YGEA 1756
            GMA+N             HA MW D SM GW GEE  RRTRESSYGG+D  SEYG YGEA
Sbjct: 474  GMATNGMGMMGSSGMEGHHAPMWNDPSMAGWTGEEQDRRTRESSYGGDDGGSEYGNYGEA 533

Query: 1757 SHDK 1768
            +H+K
Sbjct: 534  NHEK 537


>gb|EMJ26876.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
          Length = 630

 Score =  347 bits (889), Expect = 1e-92
 Identities = 186/348 (53%), Positives = 230/348 (66%)
 Frame = +2

Query: 128  MADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQMQR 307
            MA+EQID+ +E+YGG QK +Y G GAISALA++E +                EGFLQM R
Sbjct: 1    MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60

Query: 308  NQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQKSGL 487
            ++A L P G  N G Q  KT   E+R +A +  E+ +PG   + KY S+  +FPEQ+   
Sbjct: 61   SEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQ--- 117

Query: 488  APNVGPPPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLRKVPGPGESA 667
                G PP       A+ PE+      G+  Y GS  MP  VG DS D    + G     
Sbjct: 118  ----GQPPV------AKEPEL------GSTGY-GSTTMPPNVGGDSSD----ITGKTALE 156

Query: 668  TLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAMLFVGELHWW 847
            ++PS+N G     G+ QMP NQ   S  +N NRP+ NENQIRP VENG+ MLFVGELHWW
Sbjct: 157  SVPSMNSGTAGPTGVTQMPTNQI--SIKVNANRPMFNENQIRPPVENGSTMLFVGELHWW 214

Query: 848  TTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGMNGYHFNGRA 1027
            TTDAELESVL+QYG+VKEIKFFDERASGKSKGYCQVEF++P AA ACKEGM+GY FNGRA
Sbjct: 215  TTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRA 274

Query: 1028 CVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            CVVAFA+PQ++KQM A+Y++K+Q Q QSQ  GR PM++  GRG G NY
Sbjct: 275  CVVAFASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNEGVGRGGGVNY 322



 Score =  167 bits (424), Expect = 1e-38
 Identities = 79/123 (64%), Positives = 86/123 (69%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MM+PQ MMG GFDPTYM                M+  FPAVN MGLAGVAPHVNPAFFGR
Sbjct: 398  MMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGR 457

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA+N             HAGMW D SMGGWGG+EHGRRTRESSYGG+D ASEYGYGEA+
Sbjct: 458  GMATNGMGMMGSSGMDGHHAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEAN 517

Query: 1760 HDK 1768
            H+K
Sbjct: 518  HEK 520


>gb|EOY00741.1| RNA-binding family protein isoform 6 [Theobroma cacao]
          Length = 602

 Score =  345 bits (886), Expect = 3e-92
 Identities = 180/357 (50%), Positives = 230/357 (64%), Gaps = 6/357 (1%)
 Frame = +2

Query: 119  MVPMADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQ 298
            M  MA+EQIDFG+E+YGG QK +Y G GAI ALA++EM+               GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 299  MQRNQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQK 478
            +QR++A L P G  + G +  +   PE R EA      ++PG   + K+ +   R+PE++
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120

Query: 479  SGLAPNVGP------PPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLR 640
               A N         P  + +SQK    E TH  Q  N+ +QG      KVG D     +
Sbjct: 121  EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180

Query: 641  KVPGPGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAM 820
            K+          SLN G G  +G P +P NQ  +    NVN P++NENQ++P +ENG  M
Sbjct: 181  KIANDPAQ----SLNSGTGGPQGPPHVPPNQMGT----NVNHPVMNENQVQPPIENGPTM 232

Query: 821  LFVGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGM 1000
            LFVGELHWWTTDAELESVL+QYG++KEIKFFDE+ASGKSKGYCQVEFY+P++AA CKEGM
Sbjct: 233  LFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGM 292

Query: 1001 NGYHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            NGY FNGRACVVAFA+PQ++KQM A+YMNK Q Q+Q+QPQGR P ++  GRG   NY
Sbjct: 293  NGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNY 348



 Score =  175 bits (444), Expect = 5e-41
 Identities = 82/123 (66%), Positives = 88/123 (71%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MMHPQ MMG GFDPTYM                M+P FPAVN MGLAGVAPHVNPAFFGR
Sbjct: 422  MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA N             HAGMWTD+SMGGWGG+EHGRRTRESSYGGED ASEYGYG+A+
Sbjct: 482  GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 1760 HDK 1768
            H+K
Sbjct: 542  HEK 544


>gb|EOY00740.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  345 bits (886), Expect = 3e-92
 Identities = 180/357 (50%), Positives = 230/357 (64%), Gaps = 6/357 (1%)
 Frame = +2

Query: 119  MVPMADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQ 298
            M  MA+EQIDFG+E+YGG QK +Y G GAI ALA++EM+               GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 299  MQRNQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQK 478
            +QR++A L P G  + G +  +   PE R EA      ++PG   + K+ +   R+PE++
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120

Query: 479  SGLAPNVGP------PPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLR 640
               A N         P  + +SQK    E TH  Q  N+ +QG      KVG D     +
Sbjct: 121  EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180

Query: 641  KVPGPGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAM 820
            K+          SLN G G  +G P +P NQ  +    NVN P++NENQ++P +ENG  M
Sbjct: 181  KIANDPAQ----SLNSGTGGPQGPPHVPPNQMGT----NVNHPVMNENQVQPPIENGPTM 232

Query: 821  LFVGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGM 1000
            LFVGELHWWTTDAELESVL+QYG++KEIKFFDE+ASGKSKGYCQVEFY+P++AA CKEGM
Sbjct: 233  LFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGM 292

Query: 1001 NGYHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            NGY FNGRACVVAFA+PQ++KQM A+YMNK Q Q+Q+QPQGR P ++  GRG   NY
Sbjct: 293  NGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNY 348



 Score =  175 bits (444), Expect = 5e-41
 Identities = 82/123 (66%), Positives = 88/123 (71%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MMHPQ MMG GFDPTYM                M+P FPAVN MGLAGVAPHVNPAFFGR
Sbjct: 422  MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA N             HAGMWTD+SMGGWGG+EHGRRTRESSYGGED ASEYGYG+A+
Sbjct: 482  GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 1760 HDK 1768
            H+K
Sbjct: 542  HEK 544


>gb|EOY00739.1| RNA-binding family protein isoform 4 [Theobroma cacao]
          Length = 697

 Score =  345 bits (886), Expect = 3e-92
 Identities = 180/357 (50%), Positives = 230/357 (64%), Gaps = 6/357 (1%)
 Frame = +2

Query: 119  MVPMADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQ 298
            M  MA+EQIDFG+E+YGG QK +Y G GAI ALA++EM+               GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 299  MQRNQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQK 478
            +QR++A L P G  + G +  +   PE R EA      ++PG   + K+ +   R+PE++
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120

Query: 479  SGLAPNVGP------PPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLR 640
               A N         P  + +SQK    E TH  Q  N+ +QG      KVG D     +
Sbjct: 121  EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180

Query: 641  KVPGPGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAM 820
            K+          SLN G G  +G P +P NQ  +    NVN P++NENQ++P +ENG  M
Sbjct: 181  KIANDPAQ----SLNSGTGGPQGPPHVPPNQMGT----NVNHPVMNENQVQPPIENGPTM 232

Query: 821  LFVGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGM 1000
            LFVGELHWWTTDAELESVL+QYG++KEIKFFDE+ASGKSKGYCQVEFY+P++AA CKEGM
Sbjct: 233  LFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGM 292

Query: 1001 NGYHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            NGY FNGRACVVAFA+PQ++KQM A+YMNK Q Q+Q+QPQGR P ++  GRG   NY
Sbjct: 293  NGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNY 348



 Score =  175 bits (444), Expect = 5e-41
 Identities = 82/123 (66%), Positives = 88/123 (71%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MMHPQ MMG GFDPTYM                M+P FPAVN MGLAGVAPHVNPAFFGR
Sbjct: 422  MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA N             HAGMWTD+SMGGWGG+EHGRRTRESSYGGED ASEYGYG+A+
Sbjct: 482  GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 1760 HDK 1768
            H+K
Sbjct: 542  HEK 544


>gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708840|gb|EOY00737.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708841|gb|EOY00738.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 652

 Score =  345 bits (886), Expect = 3e-92
 Identities = 180/357 (50%), Positives = 230/357 (64%), Gaps = 6/357 (1%)
 Frame = +2

Query: 119  MVPMADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQ 298
            M  MA+EQIDFG+E+YGG QK +Y G GAI ALA++EM+               GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 299  MQRNQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQK 478
            +QR++A L P G  + G +  +   PE R EA      ++PG   + K+ +   R+PE++
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120

Query: 479  SGLAPNVGP------PPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLR 640
               A N         P  + +SQK    E TH  Q  N+ +QG      KVG D     +
Sbjct: 121  EQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQ 180

Query: 641  KVPGPGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAM 820
            K+          SLN G G  +G P +P NQ  +    NVN P++NENQ++P +ENG  M
Sbjct: 181  KIANDPAQ----SLNSGTGGPQGPPHVPPNQMGT----NVNHPVMNENQVQPPIENGPTM 232

Query: 821  LFVGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGM 1000
            LFVGELHWWTTDAELESVL+QYG++KEIKFFDE+ASGKSKGYCQVEFY+P++AA CKEGM
Sbjct: 233  LFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGM 292

Query: 1001 NGYHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            NGY FNGRACVVAFA+PQ++KQM A+YMNK Q Q+Q+QPQGR P ++  GRG   NY
Sbjct: 293  NGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNY 348



 Score =  175 bits (444), Expect = 5e-41
 Identities = 82/123 (66%), Positives = 88/123 (71%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MMHPQ MMG GFDPTYM                M+P FPAVN MGLAGVAPHVNPAFFGR
Sbjct: 422  MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA N             HAGMWTD+SMGGWGG+EHGRRTRESSYGGED ASEYGYG+A+
Sbjct: 482  GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 1760 HDK 1768
            H+K
Sbjct: 542  HEK 544


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  345 bits (885), Expect = 4e-92
 Identities = 189/350 (54%), Positives = 231/350 (66%), Gaps = 2/350 (0%)
 Frame = +2

Query: 128  MADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQMQR 307
            MADEQID+ +E+YGG QK +Y G GAI ALAE+EM                GE FLQM R
Sbjct: 1    MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNIGENFLQMHR 59

Query: 308  NQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQ--KS 481
            ++A   P    N GFQP  ++  + R E+      ++PG   E+KY S+G  FPEQ  K 
Sbjct: 60   SEAPPAPPSVGNGGFQPRNSN--DLRVESGGSQGLNIPGVAVESKY-STGTHFPEQNVKG 116

Query: 482  GLAPNVGPPPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLRKVPGPGE 661
                +VG P  + ++QK +  EMT+ SQA NM +QGS   P  +G D  D   K+     
Sbjct: 117  PEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISND-- 174

Query: 662  SATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAMLFVGELH 841
                P+  P AG  R IPQ+P +Q   + N++ NR   NENQIRP +ENG+ ML+VGELH
Sbjct: 175  ----PTPVPNAGVPRVIPQLPASQM--NMNMDTNRSATNENQIRPPLENGSTMLYVGELH 228

Query: 842  WWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGMNGYHFNG 1021
            WWTTDAELE+VL+QYG VKEIKFFDERASGKSKGYCQVEFY+  AAAACKEGMNG+ FNG
Sbjct: 229  WWTTDAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNG 288

Query: 1022 RACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            RACVVAFA+ Q++KQM A+YMNK Q Q QSQ QGR PM+D AGRG   NY
Sbjct: 289  RACVVAFASQQTLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNY 338



 Score =  152 bits (384), Expect = 4e-34
 Identities = 75/123 (60%), Positives = 84/123 (68%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            M+ PQ+MM  GFDPTYM                M+P FPAVN MGLAGVAPHVNPAFFGR
Sbjct: 414  MLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 473

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA N             +AGMW+D+SMGGW GEE GRRTRESSYGG+D ASEYGYGE +
Sbjct: 474  GMAPNGMGMMGPSGMDGPNAGMWSDTSMGGW-GEEPGRRTRESSYGGDDGASEYGYGEVN 532

Query: 1760 HDK 1768
            H+K
Sbjct: 533  HEK 535


>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
            notabilis]
          Length = 636

 Score =  345 bits (884), Expect = 5e-92
 Identities = 188/357 (52%), Positives = 237/357 (66%), Gaps = 9/357 (2%)
 Frame = +2

Query: 128  MADEQIDFGEEDYGGNQKTKYHG-GGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQMQ 304
            MA++ IDF +E+YGG QK +Y G GGAISALA++E++               GEGFLQ+Q
Sbjct: 1    MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60

Query: 305  RNQA-SLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQKS 481
            R++A SL    G   G Q  K +FPE R E     + ++PG   E ++ S+G +FP Q+ 
Sbjct: 61   RSEAPSLPAAAGVGNGLQAQKRNFPEPREEIGGSQQPNIPGVSAEGRFSSAGSQFPGQQD 120

Query: 482  GLAPNVGPPPTTDVSQKAQAPEMTH-----GSQAGNME--YQGSLGMPQKVGPDSLDTLR 640
            GL           V +K++A  M +     GSQ G +   +QGS  M   VG DS D   
Sbjct: 121  GLK----------VDKKSEAGSMVYPDGASGSQKGRIVAGFQGSKPMLHSVGVDSSD--- 167

Query: 641  KVPGPGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAM 820
             +PG   +  + + N G    RGI  M GNQTT   N NV+ PI+NENQIRP++ENG+ M
Sbjct: 168  -IPGKMVNEPIQAPNSGGAGPRGILPMQGNQTT--VNANVSHPIVNENQIRPSIENGSTM 224

Query: 821  LFVGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGM 1000
            LFVGELHWWTTDAELESVL+QYG+VKEIKFFDERASGKSKGYCQVE+Y+  AA ACKEGM
Sbjct: 225  LFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGM 284

Query: 1001 NGYHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            +G+ FNGRACVVAFA+PQ++KQM A YM+K QVQ QSQPQGR P++D  GRG   N+
Sbjct: 285  HGHVFNGRACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNF 341



 Score =  157 bits (398), Expect = 1e-35
 Identities = 73/123 (59%), Positives = 81/123 (65%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MM+PQ MMG GFDPTYM                M+P FPAVN MG A VAPHVNPAFFGR
Sbjct: 413  MMNPQGMMGTGFDPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFAAVAPHVNPAFFGR 472

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GM +N               GMW D S+GGWGGEEHGRRTRESSYGG+D ASEYGYG+ +
Sbjct: 473  GMTNNGMGMVGSSLMDGHQGGMWNDPSIGGWGGEEHGRRTRESSYGGDDGASEYGYGDTN 532

Query: 1760 HDK 1768
            H+K
Sbjct: 533  HEK 535


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
            gi|567891321|ref|XP_006438181.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540376|gb|ESR51420.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540377|gb|ESR51421.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  342 bits (876), Expect = 4e-91
 Identities = 182/355 (51%), Positives = 223/355 (62%), Gaps = 7/355 (1%)
 Frame = +2

Query: 128  MADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQMQR 307
            MA+EQID+ E++YGG QK +Y GGGAI ALA++E++               G+G LQ Q+
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60

Query: 308  NQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQKSGL 487
             +A     G  N   Q  KT  PE R +      +++PG   E KY ++G  FP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQ 120

Query: 488  A----PNVGP---PPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLRKV 646
                 PN+G    P    VSQK    E TH +   NM +QGS   P + G D  +    +
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSN----M 176

Query: 647  PGPGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAMLF 826
            PG   +   P LNPGA   +G   +P NQ     N NVNR ++NENQIRP +ENG  MLF
Sbjct: 177  PGRAANEPAPVLNPGAAGPQGA-LIPANQM--GVNANVNRVMVNENQIRPPLENGGTMLF 233

Query: 827  VGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGMNG 1006
            VGELHWWTTDAELESVL+QYG+ KEIKFFDERASGKSKGYCQVEF++  AAAACK+GMNG
Sbjct: 234  VGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNG 293

Query: 1007 YHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            + FNGR CVVAFA+PQ++KQM A+YMNK Q Q QSQ QG  PM+D  GRG  TNY
Sbjct: 294  HVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNY 348



 Score =  166 bits (419), Expect = 4e-38
 Identities = 81/123 (65%), Positives = 86/123 (69%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MMHPQ MMG GFDPTYM                M+P FPAVN MGLAGVAPHVNPAFF R
Sbjct: 425  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 483

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA+N             H GMWTDSSMGGW GEEHGRRTRESSYGG+D AS+YGYGEAS
Sbjct: 484  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEAS 543

Query: 1760 HDK 1768
            H+K
Sbjct: 544  HEK 546


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  341 bits (875), Expect = 5e-91
 Identities = 182/355 (51%), Positives = 223/355 (62%), Gaps = 7/355 (1%)
 Frame = +2

Query: 128  MADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQMQR 307
            MA+EQID+ E++YGG QK +Y GGGAI ALA++E++               G+G LQ Q+
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60

Query: 308  NQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQKSGL 487
             +A     G  N   Q  KT  PE R +      +++PG   E KY ++G  FP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQ 120

Query: 488  A----PNVGP---PPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLRKV 646
                 PN+G    P    VSQK    E TH +   NM +QGS   P + G D  +    +
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSN----M 176

Query: 647  PGPGESATLPSLNPGAGSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAMLF 826
            PG   +   P LNPGA   +G   +P NQ     N NVNR ++NENQIRP +ENG  MLF
Sbjct: 177  PGRVANEPAPVLNPGAAGPQGA-LIPANQM--GVNANVNRVMVNENQIRPPLENGGTMLF 233

Query: 827  VGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGMNG 1006
            VGELHWWTTDAELESVL+QYG+ KEIKFFDERASGKSKGYCQVEF++  AAAACK+GMNG
Sbjct: 234  VGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNG 293

Query: 1007 YHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            + FNGR CVVAFA+PQ++KQM A+YMNK Q Q QSQ QG  PM+D  GRG  TNY
Sbjct: 294  HVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNY 348



 Score =  164 bits (415), Expect = 1e-37
 Identities = 80/123 (65%), Positives = 86/123 (69%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MMHPQ MMG GFDPTYM                M+P FPAVN MGLAGVAPHVNPAFF R
Sbjct: 425  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 483

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA+N             H GMWTDSSMGGW GEEHGRRTRESSYGG+D AS+YGYGEA+
Sbjct: 484  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEAN 543

Query: 1760 HDK 1768
            H+K
Sbjct: 544  HEK 546


>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222852472|gb|EEE90019.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 619

 Score =  303 bits (776), Expect = 2e-79
 Identities = 175/345 (50%), Positives = 212/345 (61%), Gaps = 8/345 (2%)
 Frame = +2

Query: 161  DYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQMQRNQASLTPTGGS 340
            DY   +K +Y G GAI ALAE+EM                GE FLQM  ++A   P    
Sbjct: 2    DYEEEEKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATVG 60

Query: 341  NMGFQPPKTSFPESRAEATMLHEAHVPGG--VTEAKYVSSGLRFPEQKSGL----APNVG 502
            N GFQ       ESR E        + GG    E  Y ++   FPEQK       A +VG
Sbjct: 61   NGGFQTRNAH--ESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEAQDVG 118

Query: 503  PPPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLRKVPGPGESATLPSL 682
            P   + V+QK +  EM+H  Q  NM +Q S  +P  +G D  D  RK      +A  P  
Sbjct: 119  PVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRK------NAIEPEP 172

Query: 683  NPGAGSS--RGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAMLFVGELHWWTTD 856
             P  GS+  RG PQM  NQ   SA+  VNRP++NENQ+RP +ENG+  L+VGELHWWTTD
Sbjct: 173  LPITGSAGPRGAPQMQVNQMHMSAD--VNRPVVNENQVRPPIENGSTTLYVGELHWWTTD 230

Query: 857  AELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGMNGYHFNGRACVV 1036
            AELES  +Q+G+VKEIKFFDERASGKSKGYCQV+FYE  AAAACKEGMNG+ FNGR CVV
Sbjct: 231  AELESFASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVV 290

Query: 1037 AFATPQSIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            AFA+PQ++KQM A+YMNKTQ Q Q+Q QGR  M+D AGRG   N+
Sbjct: 291  AFASPQTLKQMGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANF 335



 Score =  108 bits (269), Expect = 1e-20
 Identities = 58/123 (47%), Positives = 64/123 (52%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MM PQ MMG GFDP YM                M+P FPAVN MGLAGVAPHVNPAFF R
Sbjct: 409  MMPPQGMMGAGFDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFAR 468

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA N             + GMW                  ESSY G++ ASEYGYGE +
Sbjct: 469  GMAPNGMGMMVSSGMDGPNPGMW------------------ESSYDGDEGASEYGYGEGN 510

Query: 1760 HDK 1768
            H+K
Sbjct: 511  HEK 513


>gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlisea aurea]
          Length = 508

 Score =  283 bits (724), Expect = 2e-73
 Identities = 177/360 (49%), Positives = 211/360 (58%), Gaps = 9/360 (2%)
 Frame = +2

Query: 119  MVPMADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXX-GEGFL 295
            M PM  EQ DFGEE+YGG QK +Y+ GGAI ALA++EMI                GE F+
Sbjct: 1    MEPMNGEQFDFGEEEYGGGQKMQYNQGGAIPALADEEMIGEEDDEYDDLYNDVNVGESFM 60

Query: 296  QMQRNQASLTPTGGSNMGFQPPKT---SFPESRAEATML--HEAHVPGGVTEAKYVSSGL 460
            Q+QR  + + P    N    P  T   S P   A A+    + A  PG           L
Sbjct: 61   QVQRPDSQIPPFKAENR-VNPSGTGDESIPSEEANASKYAGNRAFGPGA----------L 109

Query: 461  RFPEQKSGLAPNVGPPPTTDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLR 640
            +FPEQK+GL        T D SQ  +       SQ     YQGS+  P     D +  + 
Sbjct: 110  QFPEQKAGLNTTEETSVTVDRSQTVR------NSQTDQSGYQGSVA-PNNKTEDQVKNMD 162

Query: 641  KVPGPGESATLPSLNPGAG-SSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNA 817
            K  G   S     +NP  G  S+G   +P N    +AN N  RP+ +E     + ENGN 
Sbjct: 163  KTVGDPSS-----INPNVGVGSKGA--VPFNFMNMAANANAIRPVDDEYSNLGSSENGNT 215

Query: 818  MLFVGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEG 997
            ML+VGELHWWTTDAE+ESVL QYGKVKEIKFFDERASGKSKGYCQVEF++P AA ACKEG
Sbjct: 216  MLYVGELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFFDPAAAHACKEG 275

Query: 998  MNGYHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGR-IPMSD-AAGRGNGTNY 1171
            MNGY FNGRACVVAFATPQ+IKQM A+YMN+ Q Q Q+Q  GR   M+D  AGRG GTN+
Sbjct: 276  MNGYVFNGRACVVAFATPQTIKQMGASYMNRNQGQPQAQFPGRNAAMNDGGAGRGVGTNF 335



 Score =  112 bits (281), Expect = 4e-22
 Identities = 59/109 (54%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXX-MIPPFPAVNPMGLAGVAPHVNPAFFG 1576
            MMHPQ MMGPGFD  +M                 M+PPFPAVN +GL GVAPHVNPAFFG
Sbjct: 401  MMHPQGMMGPGFDLAFMGRGAGYGGGFTGPAFPGMLPPFPAVNTLGLPGVAPHVNPAFFG 460

Query: 1577 RGMASNXXXXXXXXXXXXXHAGMWTDSSM-GGWGGEEHGRRTRESSYGG 1720
            RGMA N             ++G+W D+S+ GGWGGEE GR   ESSYGG
Sbjct: 461  RGMAPNGMGMMGPSGMGGPYSGLWNDASVGGGWGGEEQGRGP-ESSYGG 508


>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
            gi|550329195|gb|ERP56065.1| hypothetical protein
            POPTR_0010s06150g [Populus trichocarpa]
          Length = 591

 Score =  261 bits (667), Expect = 7e-67
 Identities = 153/339 (45%), Positives = 187/339 (55%), Gaps = 2/339 (0%)
 Frame = +2

Query: 161  DYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQMQRNQASLTPTGGS 340
            D+   +K +Y G GAI ALAE+E+                GE FLQM  ++A   P    
Sbjct: 2    DFEEEEKMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAG 60

Query: 341  NMGFQPPKTSFPESRAEA--TMLHEAHVPGGVTEAKYVSSGLRFPEQKSGLAPNVGPPPT 514
            N GFQ       ESR E   + +      G   E KY ++G  FPEQK            
Sbjct: 61   NGGFQTRNAH--ESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQK------------ 106

Query: 515  TDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLRKVPGPGESATLPSLNPGA 694
                   QA      +  G++ Y     + QK                          G+
Sbjct: 107  -------QAGIGVEANDVGSIGYGDGSSVAQK--------------------------GS 133

Query: 695  GSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAMLFVGELHWWTTDAELESV 874
               RG+PQM  NQ   + N +VNRP++NENQ+RP +ENG   L+VGELHWWTTDAELESV
Sbjct: 134  AGPRGVPQMQVNQM--NMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESV 191

Query: 875  LTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGMNGYHFNGRACVVAFATPQ 1054
             +QYG+VKEIKFFDERASGKSKGYCQV+FYE  AAAACKEGMN + FNGR CVVAFA+ Q
Sbjct: 192  ASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQ 251

Query: 1055 SIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            ++KQM A+YM+KTQ Q Q Q QGR  M+D  GRG   NY
Sbjct: 252  TLKQMGASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANY 290



 Score =  142 bits (359), Expect = 4e-31
 Identities = 71/123 (57%), Positives = 78/123 (63%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MMH Q MMG GFDP YM                M+P FPAVN MGLAGVAPHVNPAFF R
Sbjct: 364  MMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFAR 423

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA N             + G W D+SMGGW GEE GRRTRESSY G++ ASEYGYGE +
Sbjct: 424  GMAPNGMGMMASSGMEGPNPGKWPDTSMGGW-GEEPGRRTRESSYDGDEGASEYGYGEGN 482

Query: 1760 HDK 1768
            H+K
Sbjct: 483  HEK 485


>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222864687|gb|EEF01818.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 573

 Score =  261 bits (667), Expect = 7e-67
 Identities = 153/339 (45%), Positives = 187/339 (55%), Gaps = 2/339 (0%)
 Frame = +2

Query: 161  DYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQMQRNQASLTPTGGS 340
            D+   +K +Y G GAI ALAE+E+                GE FLQM  ++A   P    
Sbjct: 2    DFEEEEKMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAG 60

Query: 341  NMGFQPPKTSFPESRAEA--TMLHEAHVPGGVTEAKYVSSGLRFPEQKSGLAPNVGPPPT 514
            N GFQ       ESR E   + +      G   E KY ++G  FPEQK            
Sbjct: 61   NGGFQTRNAH--ESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQK------------ 106

Query: 515  TDVSQKAQAPEMTHGSQAGNMEYQGSLGMPQKVGPDSLDTLRKVPGPGESATLPSLNPGA 694
                   QA      +  G++ Y     + QK                          G+
Sbjct: 107  -------QAGIGVEANDVGSIGYGDGSSVAQK--------------------------GS 133

Query: 695  GSSRGIPQMPGNQTTSSANINVNRPIINENQIRPAVENGNAMLFVGELHWWTTDAELESV 874
               RG+PQM  NQ   + N +VNRP++NENQ+RP +ENG   L+VGELHWWTTDAELESV
Sbjct: 134  AGPRGVPQMQVNQM--NMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESV 191

Query: 875  LTQYGKVKEIKFFDERASGKSKGYCQVEFYEPTAAAACKEGMNGYHFNGRACVVAFATPQ 1054
             +QYG+VKEIKFFDERASGKSKGYCQV+FYE  AAAACKEGMN + FNGR CVVAFA+ Q
Sbjct: 192  ASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQ 251

Query: 1055 SIKQMAANYMNKTQVQAQSQPQGRIPMSDAAGRGNGTNY 1171
            ++KQM A+YM+KTQ Q Q Q QGR  M+D  GRG   NY
Sbjct: 252  TLKQMGASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANY 290



 Score =  107 bits (266), Expect = 2e-20
 Identities = 60/123 (48%), Positives = 66/123 (53%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTYMXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAFFGR 1579
            MMH Q MMG GFDP YM                M+P FPAVN MGLAGVAPHVNPAFF R
Sbjct: 364  MMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFAR 423

Query: 1580 GMASNXXXXXXXXXXXXXHAGMWTDSSMGGWGGEEHGRRTRESSYGGEDNASEYGYGEAS 1759
            GMA N               GM   S M G          +ESSY G++ ASEYGYGE +
Sbjct: 424  GMAPNG-------------MGMMASSGMEG------PNPGKESSYDGDEGASEYGYGEGN 464

Query: 1760 HDK 1768
            H+K
Sbjct: 465  HEK 467


>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
            gi|548855834|gb|ERN13697.1| hypothetical protein
            AMTR_s00049p00146760 [Amborella trichopoda]
          Length = 659

 Score =  256 bits (655), Expect = 2e-65
 Identities = 158/374 (42%), Positives = 209/374 (55%), Gaps = 23/374 (6%)
 Frame = +2

Query: 119  MVPMADEQIDFGEEDYGGNQKTKYHGGGAISALAEDEMINXXXXXXXXXXXXXXGEGFLQ 298
            M PMA+EQ+D+ +EDYG NQK  +  GGAISALA++E++               G+GF+Q
Sbjct: 1    MDPMAEEQLDYEDEDYGANQKMPFQTGGAISALADEELMGEDDEYDDLYNDVNVGDGFMQ 60

Query: 299  MQRNQASLTPTGGSNMGFQPPKTSFPESRAEATMLHEAHVPGGVTEAKYVSSGLRFPEQK 478
              ++Q  +      N G Q PK   P S     +    H   G  +AK   SG    +QK
Sbjct: 61   SLQHQEPVQYESMGN-GVQAPKEE-PISTPPVNIPGVGHEEKGEKDAKL--SGFSDLDQK 116

Query: 479  ---------------SGLAPNVGPP-----PTTDVSQKAQAPEMTHGSQAGNMEYQGSLG 598
                           SGL   V  P     P     + A AP     ++       G++ 
Sbjct: 117  KAFQEQASNQLAGASSGLKIRVSEPVSEPQPQASGFRNAPAPP----AKGSGFNTAGAMD 172

Query: 599  MPQKVGPDSLDTLRKV-PGPGESATLPSLNPGAGSSRGIPQMPG-NQTTSSANINVNRPI 772
              +++   S + + +V PGPG     P +  G  ++      PG NQ  +  + +     
Sbjct: 173  ANKQLAQTSSNAVPRVGPGPG-----PGIGAGPNANMNRMMGPGPNQAGAVIDTSARFGS 227

Query: 773  INENQI-RPAVENGNAMLFVGELHWWTTDAELESVLTQYGKVKEIKFFDERASGKSKGYC 949
             N N++     E+GN MLFVGEL WWTTDAELESVL+QYG+VK++KFFDERASGKSKGYC
Sbjct: 228  ENSNRLSHGGGESGNTMLFVGELQWWTTDAELESVLSQYGRVKDLKFFDERASGKSKGYC 287

Query: 950  QVEFYEPTAAAACKEGMNGYHFNGRACVVAFATPQSIKQMAANYMNKTQVQAQSQPQGRI 1129
            QVEFY+P AAAACKE MNG+ FNGRACVVAFA+  ++KQ+  NY+NKTQ QAQ+Q QGR 
Sbjct: 288  QVEFYDPAAAAACKESMNGHVFNGRACVVAFASQHTLKQLTTNYLNKTQAQAQAQSQGRR 347

Query: 1130 PMSDAAGRGNGTNY 1171
            PM+D  GR  G +Y
Sbjct: 348  PMNDGGGRAGGPSY 361



 Score =  130 bits (328), Expect = 1e-27
 Identities = 65/129 (50%), Positives = 79/129 (61%), Gaps = 6/129 (4%)
 Frame = +2

Query: 1400 MMHPQAMMGPGFDPTY---MXXXXXXXXXXXXXXXXMIPPFPAVNPMGLAGVAPHVNPAF 1570
            ++HPQ MMG GFDPTY   +                M+P F  +  +GL GVAPHVNPAF
Sbjct: 429  LLHPQGMMGSGFDPTYGAHLGRGSGYGGFSGPHFPGMLPSFSPMGTVGLPGVAPHVNPAF 488

Query: 1571 FGRGMASNXXXXXXXXXXXXXHAGMWTDSSMG---GWGGEEHGRRTRESSYGGEDNASEY 1741
            FGRG+++N             H GMW DSSMG   GWG EEHGRRTRESSY G+D AS+Y
Sbjct: 489  FGRGVSANGMGMMGSGAMDGHHGGMWGDSSMGGGVGWGNEEHGRRTRESSY-GDDGASDY 547

Query: 1742 GYGEASHDK 1768
            GYG+  H++
Sbjct: 548  GYGDGGHER 556