BLASTX nr result
ID: Catharanthus23_contig00004234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00004234
(459 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004247344.1| PREDICTED: KH domain-containing protein At4g... 134 1e-29
gb|EXB93216.1| Poly(rC)-binding protein 1 [Morus notabilis] 130 2e-28
ref|XP_006351686.1| PREDICTED: poly(rC)-binding protein 2-like [... 128 7e-28
ref|XP_006487775.1| PREDICTED: poly(rC)-binding protein 3-like i... 124 2e-26
ref|XP_006487774.1| PREDICTED: poly(rC)-binding protein 3-like i... 124 2e-26
ref|XP_006423978.1| hypothetical protein CICLE_v10028209mg [Citr... 123 2e-26
ref|XP_006352750.1| PREDICTED: KH domain-containing protein At4g... 123 3e-26
ref|XP_006574469.1| PREDICTED: uncharacterized protein LOC100819... 121 1e-25
ref|XP_006574468.1| PREDICTED: uncharacterized protein LOC100819... 121 1e-25
ref|XP_004242353.1| PREDICTED: KH domain-containing protein At4g... 120 2e-25
gb|EOY11034.1| RNA-binding KH domain-containing protein [Theobro... 120 2e-25
ref|XP_003554712.1| PREDICTED: poly(rC)-binding protein 3-like [... 119 4e-25
gb|AAX51268.1| FLK [Arabidopsis thaliana] gi|61661326|gb|AAX5126... 119 4e-25
ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabi... 119 4e-25
ref|XP_006297308.1| hypothetical protein CARUB_v10013322mg [Caps... 119 5e-25
ref|XP_006588662.1| PREDICTED: poly(rC)-binding protein 1-like [... 118 9e-25
ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [... 118 9e-25
ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [... 118 9e-25
gb|EMJ06189.1| hypothetical protein PRUPE_ppa003484mg [Prunus pe... 117 1e-24
gb|EMT30282.1| hypothetical protein F775_32710 [Aegilops tauschii] 117 2e-24
>ref|XP_004247344.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 595
Score = 134 bits (338), Expect = 1e-29
Identities = 77/160 (48%), Positives = 92/160 (57%), Gaps = 49/160 (30%)
Frame = -3
Query: 334 FDRIN*QMAEENLEQHEV------------------DNVTEEDNVPE------------- 248
FD+ N +MA+EN EQ E+ DNV +DNV +
Sbjct: 87 FDQRNVEMADENFEQPEMGNLHDTENLDNMNNVQDNDNVNGKDNVHDANHVHDADHVHDA 146
Query: 247 -------DLEQSELPPS-----EEVHEPENEPVIP------EDKKWPGWPGENVFRMLVP 122
++ SE P+ EE H E + V P E+KKWPGWPG+NVFRMLVP
Sbjct: 147 DDVHNMNNIHDSEAIPALINAPEETHHSEEDKVTPTDAVAGEEKKWPGWPGQNVFRMLVP 206
Query: 121 VQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
+QKVGG+IGRKGEYIKK CEE KARIK+LDGPPGTTERAV
Sbjct: 207 IQKVGGVIGRKGEYIKKTCEETKARIKVLDGPPGTTERAV 246
>gb|EXB93216.1| Poly(rC)-binding protein 1 [Morus notabilis]
Length = 462
Score = 130 bits (326), Expect = 2e-28
Identities = 68/115 (59%), Positives = 81/115 (70%), Gaps = 10/115 (8%)
Frame = -3
Query: 316 QMAEENL-EQHEVDNVTEEDNVPEDLE--QSELPPSEEVHEPENEPVI-------PEDKK 167
++ E+N EQ VDNV E VPE++E + E P E+ E EPV+ +KK
Sbjct: 3 EVEEQNFGEQDVVDNVPENSEVPENVEVPEPEEPQPEQKQEQYEEPVVGGGEPVGAAEKK 62
Query: 166 WPGWPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
WPGWPGE+VFRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGT ERAV
Sbjct: 63 WPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 117
>ref|XP_006351686.1| PREDICTED: poly(rC)-binding protein 2-like [Solanum tuberosum]
Length = 531
Score = 128 bits (322), Expect = 7e-28
Identities = 59/97 (60%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Frame = -3
Query: 289 HEVDNVTEEDNVPE-DLEQSELPPSEEVHEPENEPVIPEDKKWPGWPGENVFRMLVPVQK 113
H ++N+ + + +P + E SEEV + E+KKWPGWPG+NVFRML+P+QK
Sbjct: 57 HNMNNIHDSETIPAVNNAPEETHHSEEVKVTPTDAGTGEEKKWPGWPGQNVFRMLIPIQK 116
Query: 112 VGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
VGG+IGRKGEYIKK CEE KARIK+LDGPPGTTERAV
Sbjct: 117 VGGVIGRKGEYIKKTCEETKARIKVLDGPPGTTERAV 153
>ref|XP_006487775.1| PREDICTED: poly(rC)-binding protein 3-like isoform X2 [Citrus
sinensis]
Length = 520
Score = 124 bits (310), Expect = 2e-26
Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 6/111 (5%)
Frame = -3
Query: 316 QMAEENL-EQHEVDNVTEEDNVPEDLEQSELPP--SEEVHEPENE---PVIPEDKKWPGW 155
Q+ E+ + E H ++ ED+VPED ++ P S+ + ENE V +KKWPGW
Sbjct: 67 QLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGW 126
Query: 154 PGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
PGE+VFRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGTTERAV
Sbjct: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
>ref|XP_006487774.1| PREDICTED: poly(rC)-binding protein 3-like isoform X1 [Citrus
sinensis]
Length = 521
Score = 124 bits (310), Expect = 2e-26
Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 6/111 (5%)
Frame = -3
Query: 316 QMAEENL-EQHEVDNVTEEDNVPEDLEQSELPP--SEEVHEPENE---PVIPEDKKWPGW 155
Q+ E+ + E H ++ ED+VPED ++ P S+ + ENE V +KKWPGW
Sbjct: 67 QLTEDQVPEDHVPEDQVPEDHVPEDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGW 126
Query: 154 PGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
PGE+VFRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGTTERAV
Sbjct: 127 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
>ref|XP_006423978.1| hypothetical protein CICLE_v10028209mg [Citrus clementina]
gi|557525912|gb|ESR37218.1| hypothetical protein
CICLE_v10028209mg [Citrus clementina]
Length = 521
Score = 123 bits (309), Expect = 2e-26
Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = -3
Query: 316 QMAEENL-EQHEVDNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIPEDKKWPGWPGENV 140
Q+ E+++ E H ++ +D VPED+ + E+ N V +KKWPGWPGE+V
Sbjct: 72 QVPEDHVPEDHVPEDHVPDDQVPEDIVPEDSQLQEKQENEVNLAVGSTEKKWPGWPGESV 131
Query: 139 FRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
FRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGTTERAV
Sbjct: 132 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 177
>ref|XP_006352750.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
tuberosum]
Length = 512
Score = 123 bits (308), Expect = 3e-26
Identities = 72/120 (60%), Positives = 74/120 (61%), Gaps = 17/120 (14%)
Frame = -3
Query: 310 AEENLEQHEVDNVTEEDNV------PEDLEQSELPPS-----------EEVHEPENEPVI 182
A ENL EV TEE V P LEQ E EEV EN
Sbjct: 50 AHENLLPEEVKLETEEVQVAFLQEQPVKLEQEEAQVESLQEHVIKSEPEEVQIAENGSGG 109
Query: 181 PEDKKWPGWPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
E+KKWPGWPGENVFRMLVP QKVGGIIGRKGEYIKK CEE KARIK+LDGP GT ERAV
Sbjct: 110 GEEKKWPGWPGENVFRMLVPSQKVGGIIGRKGEYIKKTCEETKARIKVLDGPHGTKERAV 169
>ref|XP_006574469.1| PREDICTED: uncharacterized protein LOC100819415 isoform X2 [Glycine
max]
Length = 483
Score = 121 bits (303), Expect = 1e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 27/125 (21%)
Frame = -3
Query: 295 EQHEVDNVTEEDNVPED---------LEQSELPP------------------SEEVHEPE 197
++HE N+ E+ N PE L + PP SEE EPE
Sbjct: 60 DEHEGGNLAEDANHPEHNFDGNDVEGLPGPDFPPQEHAEEQHVGGDVTENFASEEKQEPE 119
Query: 196 NEPVIPEDKKWPGWPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGT 17
+ E KKWPGWPGENVFRMLVPVQKVG IIGRKGE+I+K+ EE KARIKILDGPPGT
Sbjct: 120 EDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEETKARIKILDGPPGT 179
Query: 16 TERAV 2
ERAV
Sbjct: 180 AERAV 184
>ref|XP_006574468.1| PREDICTED: uncharacterized protein LOC100819415 isoform X1 [Glycine
max]
Length = 502
Score = 121 bits (303), Expect = 1e-25
Identities = 67/125 (53%), Positives = 76/125 (60%), Gaps = 27/125 (21%)
Frame = -3
Query: 295 EQHEVDNVTEEDNVPED---------LEQSELPP------------------SEEVHEPE 197
++HE N+ E+ N PE L + PP SEE EPE
Sbjct: 60 DEHEGGNLAEDANHPEHNFDGNDVEGLPGPDFPPQEHAEEQHVGGDVTENFASEEKQEPE 119
Query: 196 NEPVIPEDKKWPGWPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGT 17
+ E KKWPGWPGENVFRMLVPVQKVG IIGRKGE+I+K+ EE KARIKILDGPPGT
Sbjct: 120 EDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEETKARIKILDGPPGT 179
Query: 16 TERAV 2
ERAV
Sbjct: 180 AERAV 184
>ref|XP_004242353.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 539
Score = 120 bits (301), Expect = 2e-25
Identities = 62/99 (62%), Positives = 68/99 (68%)
Frame = -3
Query: 298 LEQHEVDNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIPEDKKWPGWPGENVFRMLVPV 119
L++H V EE V E EE+ EN E+K+WPGWPGENVFRMLVP
Sbjct: 95 LQEHPVKLEQEEAQVESLQEHVIKSEPEEMQVAENGSGGGEEKRWPGWPGENVFRMLVPS 154
Query: 118 QKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
QKVGGIIGRKGEYIKK CEE KARIK+LDGP GT ERAV
Sbjct: 155 QKVGGIIGRKGEYIKKTCEETKARIKVLDGPHGTKERAV 193
>gb|EOY11034.1| RNA-binding KH domain-containing protein [Theobroma cacao]
Length = 499
Score = 120 bits (300), Expect = 2e-25
Identities = 60/92 (65%), Positives = 71/92 (77%), Gaps = 4/92 (4%)
Frame = -3
Query: 265 EDNVPEDLEQSELP---PSEEVHEPENEPVIPE-DKKWPGWPGENVFRMLVPVQKVGGII 98
E+N E+LE+ L P + E E+E V+ +KKWPGWPGE+VFRMLVP QKVG II
Sbjct: 59 EENAEENLEEQNLQQESPHQPKQEHEDEAVVGGVEKKWPGWPGESVFRMLVPAQKVGSII 118
Query: 97 GRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
GRKGE+IKK+ EE +ARIKILDGPPGTTERAV
Sbjct: 119 GRKGEFIKKIVEETRARIKILDGPPGTTERAV 150
>ref|XP_003554712.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 446
Score = 119 bits (298), Expect = 4e-25
Identities = 60/95 (63%), Positives = 72/95 (75%)
Frame = -3
Query: 286 EVDNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIPEDKKWPGWPGENVFRMLVPVQKVG 107
EVD T ++ E E E+ EE+H E E V+ +KKWPGWPGE+VFRMLVP QKVG
Sbjct: 3 EVDQYTGGEHEVE--ETIEVEAEEEMHGGE-EAVVVAEKKWPGWPGESVFRMLVPAQKVG 59
Query: 106 GIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
GIIGRKGE+IKK+ EE +AR+KILDGPPGT +RAV
Sbjct: 60 GIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAV 94
>gb|AAX51268.1| FLK [Arabidopsis thaliana] gi|61661326|gb|AAX51269.1| FLK
[Arabidopsis thaliana]
Length = 577
Score = 119 bits (298), Expect = 4e-25
Identities = 59/94 (62%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Frame = -3
Query: 280 DNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIP-EDKKWPGWPGENVFRMLVPVQKVGG 104
D V +E+ +PE LE S + EPE + + E+K+WPGWPGE VFRMLVP QKVG
Sbjct: 147 DKVEDEEGIPEHLE------SLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGS 200
Query: 103 IIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
IIGRKG+ IKK+ EE +ARIKILDGPPGTTERAV
Sbjct: 201 IIGRKGDVIKKIVEETRARIKILDGPPGTTERAV 234
>ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative
RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9
[Arabidopsis thaliana] gi|332640585|gb|AEE74106.1|
RNA-binding KH domain-containing protein [Arabidopsis
thaliana]
Length = 577
Score = 119 bits (298), Expect = 4e-25
Identities = 59/94 (62%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Frame = -3
Query: 280 DNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIP-EDKKWPGWPGENVFRMLVPVQKVGG 104
D V +E+ +PE LE S + EPE + + E+K+WPGWPGE VFRMLVP QKVG
Sbjct: 147 DKVEDEEGIPEHLE------SLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGS 200
Query: 103 IIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
IIGRKG+ IKK+ EE +ARIKILDGPPGTTERAV
Sbjct: 201 IIGRKGDVIKKIVEETRARIKILDGPPGTTERAV 234
>ref|XP_006297308.1| hypothetical protein CARUB_v10013322mg [Capsella rubella]
gi|482566017|gb|EOA30206.1| hypothetical protein
CARUB_v10013322mg [Capsella rubella]
Length = 577
Score = 119 bits (297), Expect = 5e-25
Identities = 60/94 (63%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = -3
Query: 280 DNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIP-EDKKWPGWPGENVFRMLVPVQKVGG 104
D V +E+ +PE LE S E EPE + E+K+WPGWPGE VFRMLVP QKVG
Sbjct: 147 DKVEDEEGIPEHLE------SLEKSEPEEGAAVGGEEKRWPGWPGETVFRMLVPAQKVGS 200
Query: 103 IIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
IIGRKG+ IKK+ EE +ARIKILDGPPGTTERAV
Sbjct: 201 IIGRKGDVIKKIVEETRARIKILDGPPGTTERAV 234
>ref|XP_006588662.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 565
Score = 118 bits (295), Expect = 9e-25
Identities = 64/126 (50%), Positives = 77/126 (61%), Gaps = 28/126 (22%)
Frame = -3
Query: 295 EQHEVDNVTEEDNVPE------DLE----QSELPPSEEVHE------------------P 200
++H N+ E+ N+PE D+E +LP E E P
Sbjct: 84 DEHNAGNLAEDGNIPEHNFDGNDVEGLPGNPDLPSQEHAEEQNIGGDVTENFGSEEKRGP 143
Query: 199 ENEPVIPEDKKWPGWPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPG 20
E + E KKWPGWPGENVFRMLVPVQKVG IIGRKGE+I+K+ E+ KARIKILDGPPG
Sbjct: 144 EEDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPG 203
Query: 19 TTERAV 2
T+ERAV
Sbjct: 204 TSERAV 209
>ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 118 bits (295), Expect = 9e-25
Identities = 66/112 (58%), Positives = 79/112 (70%), Gaps = 5/112 (4%)
Frame = -3
Query: 322 N*QMAEENLEQH---EVDNVTEEDN--VPEDLEQSELPPSEEVHEPENEPVIPEDKKWPG 158
N Q+ + LEQ EV+N+ E N +PE LE ++VH + V+ E KKWPG
Sbjct: 26 NAQVHDITLEQENAQEVENLHELQNEHIPETLESEP----KQVHIEDPLTVVSE-KKWPG 80
Query: 157 WPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
WPGE+VFRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGT ERAV
Sbjct: 81 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 132
>ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 118 bits (295), Expect = 9e-25
Identities = 66/112 (58%), Positives = 79/112 (70%), Gaps = 5/112 (4%)
Frame = -3
Query: 322 N*QMAEENLEQH---EVDNVTEEDN--VPEDLEQSELPPSEEVHEPENEPVIPEDKKWPG 158
N Q+ + LEQ EV+N+ E N +PE LE ++VH + V+ E KKWPG
Sbjct: 26 NAQVHDITLEQENAQEVENLHELQNEHIPETLESEP----KQVHIEDPLTVVSE-KKWPG 80
Query: 157 WPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
WPGE+VFRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGT ERAV
Sbjct: 81 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 132
>gb|EMJ06189.1| hypothetical protein PRUPE_ppa003484mg [Prunus persica]
Length = 571
Score = 117 bits (294), Expect = 1e-24
Identities = 62/112 (55%), Positives = 74/112 (66%), Gaps = 7/112 (6%)
Frame = -3
Query: 316 QMAEENLEQHEVDNVTEEDNVPEDLEQSELPPSEEVHEPENEPVIPED-------KKWPG 158
+ A L+ HE + + E++E E EE+H E+ ED KKWPG
Sbjct: 114 EQALAQLQAHEQEQALAQFQAQEEVEVQE----EELHVREHNQEQHEDAVVGGGEKKWPG 169
Query: 157 WPGENVFRMLVPVQKVGGIIGRKGEYIKKVCEEAKARIKILDGPPGTTERAV 2
WPGE+VFRMLVP QKVG IIGRKGE+IKK+ EE +ARIKILDGPPGTTERAV
Sbjct: 170 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAV 221
>gb|EMT30282.1| hypothetical protein F775_32710 [Aegilops tauschii]
Length = 193
Score = 117 bits (293), Expect = 2e-24
Identities = 55/89 (61%), Positives = 70/89 (78%)
Frame = -3
Query: 271 TEEDNVPEDLEQSELPPSEEVHEPENEPVIPEDKKWPGWPGENVFRMLVPVQKVGGIIGR 92
T+ D+ P + Q E + EV + E+ V +DK+WPGWPG++VFR+LVP QKVG IIGR
Sbjct: 100 TQYDDEPANPYQEENAYNGEVKQQESLQVEGDDKRWPGWPGDSVFRILVPAQKVGAIIGR 159
Query: 91 KGEYIKKVCEEAKARIKILDGPPGTTERA 5
KGE+IK++CEE+KARIKILDGPPG TERA
Sbjct: 160 KGEFIKRMCEESKARIKILDGPPGATERA 188