BLASTX nr result
ID: Catharanthus23_contig00004058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00004058
(1055 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004241824.1| PREDICTED: 50S ribosomal protein L21, chloro... 190 7e-46
ref|XP_006473192.1| PREDICTED: 50S ribosomal protein L21, chloro... 190 9e-46
ref|XP_006353627.1| PREDICTED: 50S ribosomal protein L21, chloro... 190 9e-46
ref|XP_006434609.1| hypothetical protein CICLE_v10002401mg [Citr... 190 9e-46
ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloro... 184 7e-44
gb|EOY17212.1| 50S ribosomal protein L21 isoform 2 [Theobroma ca... 145 4e-42
gb|EOY17211.1| 50S ribosomal protein L21 isoform 1 [Theobroma ca... 178 4e-42
ref|XP_006376292.1| hypothetical protein POPTR_0013s11720g [Popu... 173 9e-41
ref|XP_002327335.1| predicted protein [Populus trichocarpa] 173 9e-41
gb|EMJ00040.1| hypothetical protein PRUPE_ppa011231mg [Prunus pe... 172 2e-40
ref|XP_002325555.1| 50S ribosomal protein L21 [Populus trichocar... 171 4e-40
ref|XP_004149413.1| PREDICTED: 50S ribosomal protein L21, chloro... 169 2e-39
gb|EXB57726.1| 50S ribosomal protein L21 [Morus notabilis] 169 2e-39
ref|XP_006371468.1| hypothetical protein POPTR_0019s11310g [Popu... 169 2e-39
ref|XP_004300037.1| PREDICTED: 50S ribosomal protein L21, chloro... 166 1e-38
ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus... 164 4e-38
sp|P24613.1|RK21_SPIOL RecName: Full=50S ribosomal protein L21, ... 163 1e-37
pdb|3BBO|T Chain T, Homology Model For The Spinach Chloroplast 5... 162 2e-37
ref|XP_006856685.1| hypothetical protein AMTR_s00054p00125650 [A... 161 4e-37
ref|XP_006305607.1| hypothetical protein CARUB_v10010279mg [Caps... 161 4e-37
>ref|XP_004241824.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like [Solanum
lycopersicum]
Length = 212
Score = 190 bits (483), Expect = 7e-46
Identities = 104/153 (67%), Positives = 117/153 (76%), Gaps = 4/153 (2%)
Frame = +3
Query: 327 FVPKFSQTETAPPLAEPESANQVLEIPVQE----QPRREEVFAVVMIGSRQYIVFPGRYI 494
FVPK+S++E P+AE E+ E PV E +P+REE+FAVVM+GSRQYIVFPGRYI
Sbjct: 58 FVPKYSESEA--PVAEVEADQ---EEPVVEATSLEPKREEIFAVVMVGSRQYIVFPGRYI 112
Query: 495 YTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXXXXXXXXX 674
YTQRLKGANVNDKIILNKVLLVGTKTST++GKPVV NA VHAVVEEQL D
Sbjct: 113 YTQRLKGANVNDKIILNKVLLVGTKTSTWVGKPVVPNATVHAVVEEQLKDKKVIVFKYKK 172
Query: 675 XXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
GHRQPITRIRIMGITGY++SPAVTL
Sbjct: 173 KKNYRRNIGHRQPITRIRIMGITGYQDSPAVTL 205
>ref|XP_006473192.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like [Citrus
sinensis]
Length = 222
Score = 190 bits (482), Expect = 9e-46
Identities = 105/162 (64%), Positives = 117/162 (72%), Gaps = 11/162 (6%)
Frame = +3
Query: 321 FLFVPKFSQTETAP---PLAEPESA--------NQVLEIPVQEQPRREEVFAVVMIGSRQ 467
F F KFSQTE P P EPE+A +V+E +E+P+REE+FAVVMIGSRQ
Sbjct: 54 FSFTRKFSQTEPPPVSEPEVEPEAALEAEAKPTTEVVESAAKEEPKREEIFAVVMIGSRQ 113
Query: 468 YIVFPGRYIYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDX 647
YIVFPGR+IYTQRLKGANVNDKIILNKVLLVGTKT+TYIGKPVV NAAVHAVVEEQ L+
Sbjct: 114 YIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLNP 173
Query: 648 XXXXXXXXXXXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
GHRQP TRIRI GITGY++ PAVTL
Sbjct: 174 KVIVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPAVTL 215
>ref|XP_006353627.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like [Solanum
tuberosum]
Length = 216
Score = 190 bits (482), Expect = 9e-46
Identities = 103/154 (66%), Positives = 118/154 (76%), Gaps = 5/154 (3%)
Frame = +3
Query: 327 FVPKFSQTETAPPLAEPES-ANQVLEIPVQE----QPRREEVFAVVMIGSRQYIVFPGRY 491
FVPK+S++E P+AE E+ + + PV E +P+REE+FAVVM+GSRQYIVFPGRY
Sbjct: 58 FVPKYSESEA--PVAEIEADPEEPVATPVVEATSLEPKREEIFAVVMVGSRQYIVFPGRY 115
Query: 492 IYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXXXXXXXX 671
IYTQRLKGANVNDKIILNKVLLVGTKTST++GKPVV NA VHAVVEEQL D
Sbjct: 116 IYTQRLKGANVNDKIILNKVLLVGTKTSTWVGKPVVPNATVHAVVEEQLKDKKVIVFKYK 175
Query: 672 XXXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
GHRQPITRIRIMGITGY++SPAVTL
Sbjct: 176 KKKNYRRNIGHRQPITRIRIMGITGYQDSPAVTL 209
>ref|XP_006434609.1| hypothetical protein CICLE_v10002401mg [Citrus clementina]
gi|557536731|gb|ESR47849.1| hypothetical protein
CICLE_v10002401mg [Citrus clementina]
Length = 222
Score = 190 bits (482), Expect = 9e-46
Identities = 105/162 (64%), Positives = 117/162 (72%), Gaps = 11/162 (6%)
Frame = +3
Query: 321 FLFVPKFSQTETAP---PLAEPESA--------NQVLEIPVQEQPRREEVFAVVMIGSRQ 467
F F KFSQTE P P EPE+A +V+E +E+P+REE+FAVVMIGSRQ
Sbjct: 54 FSFTHKFSQTEPPPVSEPEVEPEAALEAEAEPTTEVVESAAKEEPKREEIFAVVMIGSRQ 113
Query: 468 YIVFPGRYIYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDX 647
YIVFPGR+IYTQRLKGANVNDKIILNKVLLVGTKT+TYIGKPVV NAAVHAVVEEQ L+
Sbjct: 114 YIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLNP 173
Query: 648 XXXXXXXXXXXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
GHRQP TRIRI GITGY++ PAVTL
Sbjct: 174 KVIVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPAVTL 215
>ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloroplastic [Vitis
vinifera] gi|297745266|emb|CBI40346.3| unnamed protein
product [Vitis vinifera]
Length = 209
Score = 184 bits (466), Expect = 7e-44
Identities = 100/149 (67%), Positives = 112/149 (75%)
Frame = +3
Query: 327 FVPKFSQTETAPPLAEPESANQVLEIPVQEQPRREEVFAVVMIGSRQYIVFPGRYIYTQR 506
F P + E++ P +E A QV+E P E P+REE+FAVVMIGSRQYIVFPGRYIYTQR
Sbjct: 62 FEPSVIEVESSEPNSE---ALQVVEEPPPELPKREEIFAVVMIGSRQYIVFPGRYIYTQR 118
Query: 507 LKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXXXXXXXXXXXXX 686
LKGA+VNDKIILN+VLLVGTKTSTYIGKPVV NAAVHAVVEEQ L+
Sbjct: 119 LKGADVNDKIILNRVLLVGTKTSTYIGKPVVPNAAVHAVVEEQGLNPKVMVFKYKKKKNY 178
Query: 687 XXXXGHRQPITRIRIMGITGYENSPAVTL 773
GHRQP TRIRI GITGY++SPAVTL
Sbjct: 179 RRNIGHRQPNTRIRITGITGYQDSPAVTL 207
>gb|EOY17212.1| 50S ribosomal protein L21 isoform 2 [Theobroma cacao]
Length = 256
Score = 145 bits (365), Expect(2) = 4e-42
Identities = 78/114 (68%), Positives = 92/114 (80%), Gaps = 9/114 (7%)
Frame = +3
Query: 321 FLFVPKFSQT-----ETAPP--LAEPESANQVLEI--PVQEQPRREEVFAVVMIGSRQYI 473
F +PK S++ ET P +EPE A + E+ +++P+REE+FAVVMIGSRQYI
Sbjct: 64 FCTIPKSSESDAGVVETEPDNIQSEPEPAPEPAEVVEAAKDKPKREEIFAVVMIGSRQYI 123
Query: 474 VFPGRYIYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQ 635
VFPGRYIYTQRLKGANVND+I+LNKVLLVGTKT+TYIGKPVV NAAVHAVVEEQ
Sbjct: 124 VFPGRYIYTQRLKGANVNDEIVLNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQ 177
Score = 54.7 bits (130), Expect(2) = 4e-42
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +2
Query: 647 ESYCLQVQEEKELPEKYWSPTADYTDKNYGHHGI*ELTGSHTSIRGFYV 793
+S CLQVQEE++L EKYW+ TA+Y DK+ HH + L+ T + F+V
Sbjct: 183 KSSCLQVQEEEKLSEKYWTSTAEYADKDNRHHRLPRLSSGDTQLLKFHV 231
>gb|EOY17211.1| 50S ribosomal protein L21 isoform 1 [Theobroma cacao]
Length = 225
Score = 178 bits (451), Expect = 4e-42
Identities = 99/160 (61%), Positives = 116/160 (72%), Gaps = 9/160 (5%)
Frame = +3
Query: 321 FLFVPKFSQT-----ETAPP--LAEPESANQVLEI--PVQEQPRREEVFAVVMIGSRQYI 473
F +PK S++ ET P +EPE A + E+ +++P+REE+FAVVMIGSRQYI
Sbjct: 64 FCTIPKSSESDAGVVETEPDNIQSEPEPAPEPAEVVEAAKDKPKREEIFAVVMIGSRQYI 123
Query: 474 VFPGRYIYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXX 653
VFPGRYIYTQRLKGANVND+I+LNKVLLVGTKT+TYIGKPVV NAAVHAVVEEQ L+
Sbjct: 124 VFPGRYIYTQRLKGANVNDEIVLNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLNPKV 183
Query: 654 XXXXXXXXXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
GHRQP TRIRI GITGY++ PAVTL
Sbjct: 184 VVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPAVTL 223
>ref|XP_006376292.1| hypothetical protein POPTR_0013s11720g [Populus trichocarpa]
gi|550325568|gb|ERP54089.1| hypothetical protein
POPTR_0013s11720g [Populus trichocarpa]
Length = 257
Score = 173 bits (439), Expect = 9e-41
Identities = 94/166 (56%), Positives = 112/166 (67%), Gaps = 10/166 (6%)
Frame = +3
Query: 306 ERASPFLFVPKFSQTETAPPLAEPE----------SANQVLEIPVQEQPRREEVFAVVMI 455
+R + F PKFS++E AEPE +A Q++E+ +E P+REE+FAVVM+
Sbjct: 90 KRPTFFANPPKFSESEALVVEAEPEVPVSEANPEPAATQMVEVAKEEPPKREEIFAVVMV 149
Query: 456 GSRQYIVFPGRYIYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQ 635
GSRQYIV PGR++Y QRLKGANVNDK+ LNKVLLVGT+TS YIGKPVV NA VHAVVEEQ
Sbjct: 150 GSRQYIVIPGRWLYVQRLKGANVNDKVNLNKVLLVGTRTSAYIGKPVVTNATVHAVVEEQ 209
Query: 636 LLDXXXXXXXXXXXXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
LD GHRQP TRIRI GITGY++ P TL
Sbjct: 210 GLDAKKIVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPVSTL 255
>ref|XP_002327335.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 173 bits (439), Expect = 9e-41
Identities = 94/166 (56%), Positives = 112/166 (67%), Gaps = 10/166 (6%)
Frame = +3
Query: 306 ERASPFLFVPKFSQTETAPPLAEPE----------SANQVLEIPVQEQPRREEVFAVVMI 455
+R + F PKFS++E AEPE +A Q++E+ +E P+REE+FAVVM+
Sbjct: 60 KRPTFFANPPKFSESEALVVEAEPEVPVSEANPEPAATQMVEVAKEEPPKREEIFAVVMV 119
Query: 456 GSRQYIVFPGRYIYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQ 635
GSRQYIV PGR++Y QRLKGANVNDK+ LNKVLLVGT+TS YIGKPVV NA VHAVVEEQ
Sbjct: 120 GSRQYIVIPGRWLYVQRLKGANVNDKVNLNKVLLVGTRTSAYIGKPVVTNATVHAVVEEQ 179
Query: 636 LLDXXXXXXXXXXXXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
LD GHRQP TRIRI GITGY++ P TL
Sbjct: 180 GLDAKKIVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPVSTL 225
>gb|EMJ00040.1| hypothetical protein PRUPE_ppa011231mg [Prunus persica]
Length = 218
Score = 172 bits (436), Expect = 2e-40
Identities = 94/144 (65%), Positives = 106/144 (73%)
Frame = +3
Query: 342 SQTETAPPLAEPESANQVLEIPVQEQPRREEVFAVVMIGSRQYIVFPGRYIYTQRLKGAN 521
S++E P EP +A QV+E P P+RE++F VVMIG RQYIV PGRYIYTQRLKGAN
Sbjct: 76 SESEAKPDDTEP-AALQVVETP--SSPKREQLFGVVMIGGRQYIVIPGRYIYTQRLKGAN 132
Query: 522 VNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXXXXXXXXXXXXXXXXXG 701
VNDKI+LNKVLLVGTKT+TYIGKPVV NAAVHAVVEEQ L+ G
Sbjct: 133 VNDKIVLNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLNDKVVVFKYKKKKNYRRNIG 192
Query: 702 HRQPITRIRIMGITGYENSPAVTL 773
HRQP TRIRI GITGY++ PAVTL
Sbjct: 193 HRQPNTRIRITGITGYQDYPAVTL 216
>ref|XP_002325555.1| 50S ribosomal protein L21 [Populus trichocarpa]
gi|222862430|gb|EEE99936.1| 50S ribosomal protein L21
[Populus trichocarpa]
Length = 206
Score = 171 bits (433), Expect = 4e-40
Identities = 92/155 (59%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Frame = +3
Query: 312 ASPFLFVPKFSQTETAPPLAEPE-SANQVLEIPVQEQPRREEVFAVVMIGSRQYIVFPGR 488
+SP +F + T A P A PE +A Q++E+ +E +REE+FAVVM+GSRQYIV PGR
Sbjct: 52 SSPLIFSKR--PTFFARPKANPEPAATQIVEVAKEEPTKREEIFAVVMVGSRQYIVIPGR 109
Query: 489 YIYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXXXXXXX 668
++Y QRLKGANVNDKI+LNKVLLVGT+TS YIGKPVV NA+VHAVVEEQ LD
Sbjct: 110 WLYVQRLKGANVNDKIVLNKVLLVGTRTSAYIGKPVVTNASVHAVVEEQGLDAKKIVFKY 169
Query: 669 XXXXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
GHRQP TRIRI GITGY++ P TL
Sbjct: 170 KRKKNYRRNIGHRQPNTRIRITGITGYQDFPVSTL 204
>ref|XP_004149413.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like [Cucumis
sativus] gi|449496845|ref|XP_004160241.1| PREDICTED: 50S
ribosomal protein L21, chloroplastic-like [Cucumis
sativus]
Length = 206
Score = 169 bits (428), Expect = 2e-39
Identities = 96/151 (63%), Positives = 107/151 (70%)
Frame = +3
Query: 321 FLFVPKFSQTETAPPLAEPESANQVLEIPVQEQPRREEVFAVVMIGSRQYIVFPGRYIYT 500
F F+ S +ETA ++P + Q LEIP P REE+FAVVMIGSRQYIVFPGRYI+T
Sbjct: 57 FSFLLNSSDSETALIDSDPADS-QTLEIP--SPPNREEIFAVVMIGSRQYIVFPGRYIHT 113
Query: 501 QRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXXXXXXXXXXX 680
QRLKGA+VNDKI LNKVLLVGTKT TYIGKPVV NAAVHAVVEEQ LD
Sbjct: 114 QRLKGADVNDKITLNKVLLVGTKTQTYIGKPVVTNAAVHAVVEEQGLDDKVIVFKYKKKK 173
Query: 681 XXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
GHRQP TRIRI I+GY++ PA TL
Sbjct: 174 NYRRNIGHRQPNTRIRITEISGYQDYPATTL 204
>gb|EXB57726.1| 50S ribosomal protein L21 [Morus notabilis]
Length = 233
Score = 169 bits (427), Expect = 2e-39
Identities = 95/172 (55%), Positives = 108/172 (62%), Gaps = 15/172 (8%)
Frame = +3
Query: 303 PERASPFLFVPKFSQTETAPPLAEPESANQVLEIPVQEQPRREEVFAVVMIGSRQYIVFP 482
P A+ P + E P E ++A V P + P+REE+FAVVMIGSRQYIVFP
Sbjct: 57 PRAAATESEAPPVLEAEVETPKLEEDAAPAVEASPEEPPPKREEIFAVVMIGSRQYIVFP 116
Query: 483 GRYIYTQRLKGANVNDK---------------IILNKVLLVGTKTSTYIGKPVVQNAAVH 617
GR+IYTQRLKGAN+NDK I+L KVLLVGTK STYIGKPVV NAAVH
Sbjct: 117 GRFIYTQRLKGANINDKCLPVLSTLKVLDIAQIVLKKVLLVGTKNSTYIGKPVVTNAAVH 176
Query: 618 AVVEEQLLDXXXXXXXXXXXXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
AVVEEQ LD GHRQPITRI+I GITGY++ PAVTL
Sbjct: 177 AVVEEQGLDKKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYQDYPAVTL 228
>ref|XP_006371468.1| hypothetical protein POPTR_0019s11310g [Populus trichocarpa]
gi|118486114|gb|ABK94900.1| unknown [Populus
trichocarpa] gi|550317279|gb|ERP49265.1| hypothetical
protein POPTR_0019s11310g [Populus trichocarpa]
Length = 225
Score = 169 bits (427), Expect = 2e-39
Identities = 89/146 (60%), Positives = 107/146 (73%), Gaps = 3/146 (2%)
Frame = +3
Query: 345 QTETAPPLAE--PE-SANQVLEIPVQEQPRREEVFAVVMIGSRQYIVFPGRYIYTQRLKG 515
+ ET P++E PE +A Q++E+ +E +REE+FAVVM+GSRQYIV PGR++Y QRLKG
Sbjct: 78 EAETEVPVSEANPEPAATQIVEVAKEEPTKREEIFAVVMVGSRQYIVIPGRWLYVQRLKG 137
Query: 516 ANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXXXXXXXXXXXXXXXX 695
ANVNDKI+LNKVLLVGT+TS YIGKPVV NA+VHAVVEEQ LD
Sbjct: 138 ANVNDKIVLNKVLLVGTRTSAYIGKPVVTNASVHAVVEEQGLDAKKIVFKYKRKKNYRRN 197
Query: 696 XGHRQPITRIRIMGITGYENSPAVTL 773
GHRQP TRIRI GITGY++ P TL
Sbjct: 198 IGHRQPNTRIRITGITGYQDFPVSTL 223
>ref|XP_004300037.1| PREDICTED: 50S ribosomal protein L21, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 214
Score = 166 bits (420), Expect = 1e-38
Identities = 92/162 (56%), Positives = 109/162 (67%), Gaps = 5/162 (3%)
Frame = +3
Query: 303 PERASPFLFVPKFSQTETAPPLAE-----PESANQVLEIPVQEQPRREEVFAVVMIGSRQ 467
P A P L PK S+ ++A AE P ++ +E P+REE+FAVVMIG RQ
Sbjct: 53 PRLAFPLL--PKSSEIDSAVLEAELQAPEPVASESATAAASEETPKREEIFAVVMIGGRQ 110
Query: 468 YIVFPGRYIYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDX 647
YIV PGRYIYTQRLKGA VNDK++LNKVLLVGTKT+TYIGKP+V NAA+HAVVEEQ L+
Sbjct: 111 YIVIPGRYIYTQRLKGAKVNDKVVLNKVLLVGTKTTTYIGKPLVTNAAIHAVVEEQGLND 170
Query: 648 XXXXXXXXXXXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
GHRQP +RIRI ITGY++ PAVTL
Sbjct: 171 KVVVFKYKKKKNYRRNIGHRQPNSRIRITAITGYQDYPAVTL 212
>ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus communis]
gi|223533821|gb|EEF35552.1| 50S ribosomal protein L21,
putative [Ricinus communis]
Length = 214
Score = 164 bits (416), Expect = 4e-38
Identities = 89/157 (56%), Positives = 105/157 (66%), Gaps = 8/157 (5%)
Frame = +3
Query: 327 FVPKFSQTETAPPLAEPESANQVLEIP--------VQEQPRREEVFAVVMIGSRQYIVFP 482
F+P +E+ P+ E E AN P +E+ +REE+FAVVM+G RQYIV P
Sbjct: 56 FLPILKSSESDAPVLEVEDANAPELQPEPAPFVEVAKEETKREEIFAVVMVGGRQYIVIP 115
Query: 483 GRYIYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXXXXX 662
GR+IY QRLKGANVNDK+ LNKVLLVGT+T+TYIGKPVV NA VHAVVEEQ L+
Sbjct: 116 GRFIYVQRLKGANVNDKVALNKVLLVGTRTTTYIGKPVVTNAVVHAVVEEQGLNPKVVVF 175
Query: 663 XXXXXXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
GHRQP TRIRI GITGY++ PAVTL
Sbjct: 176 KYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPAVTL 212
>sp|P24613.1|RK21_SPIOL RecName: Full=50S ribosomal protein L21, chloroplastic; AltName:
Full=CL21; AltName: Full=CS-L7; Flags: Precursor
gi|21315|emb|CAA40019.1| L21 r-protein [Spinacia
oleracea] gi|170135|gb|AAA34041.1| ribosomal protein L21
[Spinacia oleracea] gi|310590|gb|AAA74715.1| ribosomal
protein L21 [Spinacia oleracea]
Length = 256
Score = 163 bits (412), Expect = 1e-37
Identities = 84/118 (71%), Positives = 91/118 (77%)
Frame = +3
Query: 420 PRREEVFAVVMIGSRQYIVFPGRYIYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVV 599
P REE+FAVV+IGSRQYIV PGR+IYTQRLKGA VNDKI+LNKVLLVGTK STYIG P+V
Sbjct: 118 PPREEIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIV 177
Query: 600 QNAAVHAVVEEQLLDXXXXXXXXXXXXXXXXXXGHRQPITRIRIMGITGYENSPAVTL 773
NAAVHAVVEEQLLD GHRQPITRI+I GITGYE+ PA TL
Sbjct: 178 TNAAVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYEDYPASTL 235
>pdb|3BBO|T Chain T, Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 257
Score = 162 bits (410), Expect = 2e-37
Identities = 90/142 (63%), Positives = 97/142 (68%), Gaps = 3/142 (2%)
Frame = +3
Query: 357 APPLAEPES---ANQVLEIPVQEQPRREEVFAVVMIGSRQYIVFPGRYIYTQRLKGANVN 527
AP PE NQ L PR E +FAVV+IGSRQYIV PGR+IYTQRLKGA VN
Sbjct: 95 APEPGTPEYNDIINQFLPKKGPPPPREEIIFAVVVIGSRQYIVIPGRWIYTQRLKGATVN 154
Query: 528 DKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXXXXXXXXXXXXXXXXXGHR 707
DKI+LNKVLLVGTK STYIG P+V NAAVHAVVEEQLLD GHR
Sbjct: 155 DKIVLNKVLLVGTKASTYIGTPIVTNAAVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHR 214
Query: 708 QPITRIRIMGITGYENSPAVTL 773
QPITRI+I GITGYE+ PA TL
Sbjct: 215 QPITRIKITGITGYEDYPASTL 236
>ref|XP_006856685.1| hypothetical protein AMTR_s00054p00125650 [Amborella trichopoda]
gi|548860585|gb|ERN18152.1| hypothetical protein
AMTR_s00054p00125650 [Amborella trichopoda]
Length = 213
Score = 161 bits (408), Expect = 4e-37
Identities = 87/134 (64%), Positives = 97/134 (72%)
Frame = +3
Query: 372 EPESANQVLEIPVQEQPRREEVFAVVMIGSRQYIVFPGRYIYTQRLKGANVNDKIILNKV 551
E ESA + V + P E+V+AVVM+GSRQYIVFPGR+IYTQRLK ANVNDKIILNKV
Sbjct: 79 EEESAQAIQPEAVAQVPIGEDVYAVVMVGSRQYIVFPGRFIYTQRLKDANVNDKIILNKV 138
Query: 552 LLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXXXXXXXXXXXXXXXXXGHRQPITRIRI 731
LLVGT+TSTYIGKPVV NAAVHAVVE Q L+ GH QP TRIRI
Sbjct: 139 LLVGTRTSTYIGKPVVPNAAVHAVVEAQGLNPKVVVFKYKKKKNYRRNIGHLQPHTRIRI 198
Query: 732 MGITGYENSPAVTL 773
GITGY++SPA TL
Sbjct: 199 TGITGYQDSPAATL 212
>ref|XP_006305607.1| hypothetical protein CARUB_v10010279mg [Capsella rubella]
gi|482574318|gb|EOA38505.1| hypothetical protein
CARUB_v10010279mg [Capsella rubella]
Length = 215
Score = 161 bits (408), Expect = 4e-37
Identities = 88/152 (57%), Positives = 105/152 (69%), Gaps = 4/152 (2%)
Frame = +3
Query: 321 FLFVPKFSQT--ETAPPLAEPESA--NQVLEIPVQEQPRREEVFAVVMIGSRQYIVFPGR 488
F PKF+++ E P + E+ + V E+ +++P+REE+FAVVM+G RQYIVFPGR
Sbjct: 59 FPVAPKFAESVVEAEPETTDIEAVVVSDVSEV-AEDKPKREEIFAVVMVGGRQYIVFPGR 117
Query: 489 YIYTQRLKGANVNDKIILNKVLLVGTKTSTYIGKPVVQNAAVHAVVEEQLLDXXXXXXXX 668
Y+YTQRLK ANV+D+I+LNKVLLVGTKT TYIGKPVV NA VHAVVE Q LD
Sbjct: 118 YLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVENQGLDDKVVVFKY 177
Query: 669 XXXXXXXXXXGHRQPITRIRIMGITGYENSPA 764
GHRQP TRIRI GITGYE PA
Sbjct: 178 KPKKKYRRNIGHRQPNTRIRITGITGYEEYPA 209