BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00003288
         (6339 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...  2806   0.0  
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...  2803   0.0  
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...  2774   0.0  
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su...  2738   0.0  
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  2738   0.0  
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun...  2737   0.0  
gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus pe...  2736   0.0  
gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isofo...  2733   0.0  
ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [S...  2732   0.0  
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su...  2731   0.0  
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su...  2730   0.0  
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su...  2730   0.0  
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su...  2730   0.0  
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su...  2730   0.0  
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr...  2730   0.0  
gb|AFW57310.1| RNA polymerase II large subunit family protein [Z...  2727   0.0  
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su...  2725   0.0  
ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II su...  2724   0.0  
ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su...  2724   0.0  
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su...  2724   0.0  

>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
            lycopersicum]
          Length = 1846

 Score = 2806 bits (7273), Expect = 0.0
 Identities = 1383/1535 (90%), Positives = 1453/1535 (94%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP SPAEVAKV+ VQFGI+SPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETCMANMAEC GHFGHLELAKPMFHIGF+K VLSI+RCVCFNCSK+LADE+DPK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQAMRIRNPKNRL+K+LDACKNKTKCEGGDEIDVQGQD+EEPVKKSRGGCGAQQP I I
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            DGMKMVAEY           Q+PEP ERKQQLSAE+VLS+LKR+SD+DC LLG NP++AR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQ L        PSVMMDTSSRSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R +AWH D EKG ITPGDT VR+EKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQ  FS+GIGDTIADASTME IN+TIS AK +VKELI+  +   L
Sbjct: 661  RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            EAEPGRTM ESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK KK  FDDM+ YEIDDP W P YM PEAVEDLK IREIRSVFDAEVQKLEADR  
Sbjct: 901  LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            LG+EIA TGDN+WPLPVNI+RL+ NAQKTFKIDFRRPSDMHP++IVE VDKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            GDDYLS EAQKNATLFFNILLRS+LASKRVLK+YRL++EAFEWV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            PEV + KERAK+VQCALEYTTLRSVT ATEVWYDPDPMST+I EDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
            DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 2336 NDEAPKGELNDESEDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRAD 2157
            NDEAPKGEL++ +EDDVFLKKIESNMLTEMALRGIPDINKVFIKN+KV KF+  EGF+A+
Sbjct: 1261 NDEAPKGELDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAE 1320

Query: 2156 NEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGS 1977
            NEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGS
Sbjct: 1321 NEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGS 1380

Query: 1976 YVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDHL 1797
            YVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVFAE+DHL
Sbjct: 1381 YVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDHL 1440

Query: 1796 RGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGTP 1617
            RGVTENIMLGQLAPIGTG C+L LNEEMLKQAIEIPLPSYMEG LEFGMTPGRSPI+GTP
Sbjct: 1441 RGVTENIMLGQLAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTP 1500

Query: 1616 YHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            YH+GMMSP+YLLSPN+R+SP +DAQFSPYV GMAF
Sbjct: 1501 YHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score = 2803 bits (7266), Expect = 0.0
 Identities = 1381/1535 (89%), Positives = 1452/1535 (94%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP SPAEVAKV+ VQFGI+SPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETCMANMAEC GHFGHLELAKPMFHIGF+K VLSI+RCVCFNCSK+LADE+DPK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQAMRIRNPKNRL+K+LDACKNKTKCEGGDEIDVQG D+EEPVKKSRGGCGAQQP I I
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            DGMKMVAEY           Q+PEP ERKQQLSAE+VLS+LKR+SD+DC LLG NP++AR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQ L        PSVMMDTSSRSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R +AWH D EKG ITPGDT VR+EKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQ  FS+GIGDTIADASTME IN+TIS AK +VKELI+  +   L
Sbjct: 661  RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            EAEPGRTM ESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK KK  FDDM+ YEIDDP W P YM PEAVEDLK IREIRSVFDAEVQKLEADR  
Sbjct: 901  LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            LG+EIA TGDN+WPLPVNI+RL+ NAQKTFKIDFRRPSDMHP++IVE VDKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            GDDYLS EAQKNATLFFNILLRS+LASKRVLK+YRL++EAFEWV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            PEV + KERAK+VQCALEYTTLRSVT ATEVWYDPDPMST+I EDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
            DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 2336 NDEAPKGELNDESEDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRAD 2157
            NDEAPKGEL++ +EDDVFLKKIESNMLTEMALRGIPDINKVFIKN+KV KF+  EGF+A+
Sbjct: 1261 NDEAPKGELDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAE 1320

Query: 2156 NEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGS 1977
            NEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGS
Sbjct: 1321 NEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGS 1380

Query: 1976 YVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDHL 1797
            YVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVFAE+DHL
Sbjct: 1381 YVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDHL 1440

Query: 1796 RGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGTP 1617
            RGVTENIMLGQLAPIGTG C+L LNEEMLKQAIEIPLPSYMEG LEFGMTPGRSPI+GTP
Sbjct: 1441 RGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTP 1500

Query: 1616 YHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            YH+GMMSP+YLLSPN+R+SP +DAQFSPYV GMAF
Sbjct: 1501 YHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score = 2774 bits (7190), Expect = 0.0
 Identities = 1374/1536 (89%), Positives = 1448/1536 (94%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP+SPAEVAKV++VQFGILSPDEIRQMSVV IEH ETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSK+LADEED K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA +IRNPKNRLKKILDACKNK+KCEGGDEI+ Q  DS+EPVKKSRGGCGAQQP + I
Sbjct: 121  FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM+AEY           QLPEP ERKQQLSAE+VL+VLKRISD+DC LLG NP+YAR
Sbjct: 181  EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R +AWH + E G ITPGDT VR+EKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQNGFS+GIGDTIADA+TME IN+TISKAKNEVKELI   +  +L
Sbjct: 661  RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            EAEPGRTM ESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIPYGF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KK EFD +FKYEIDD  W P YM PE VEDLKTIRE R+VFDAEVQKLEADR  
Sbjct: 901  LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            LG+EIATTGDN+WP+PVN+KRLI NAQKTFK+D RRPSDMHP++IVE VDKLQERLKVV 
Sbjct: 961  LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            GDD +S EAQKNATLFFNILLRS+ ASKRVLK+YRLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            P+VS+ KERAK+VQCALEYTTLRSVT ATEVWYDPDPMSTII EDV+FVKSYYEMPDEE+
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
             P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGEL DES EDDVFLKKIESNMLTEMALRGIPDINKVFIK+ KVNKF++ EGF+ 
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
            + EWMLDTEGVNLLAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AETD 
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDF 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTGDCAL LN++ML+ AIE+ LPSYMEG L+FGMTP RSPITGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYMEG-LDFGMTPSRSPITGT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYH+GMMSP+YLLSPN+RLSP +DAQFSPYV GMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535


>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
            sativus]
          Length = 1853

 Score = 2738 bits (7097), Expect = 0.0
 Identities = 1355/1536 (88%), Positives = 1439/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP+SPAEVAKV++VQFGILSPDEIRQMSVV IEHGETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVL+IMR VCFNCSK+L DEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA+RI+NPKNRL+KILDACKNKTKCEGGDEIDVQGQDS++PVKKSRGGCGAQQP I I
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM AEY           QLPEP ERKQ L+AE+VL +LKRI+D+DCKLLG NP+YAR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFI KDVFMN LMWWEDFDGKIPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R +AWH + E G ITPGDT VR+EKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADA+TME IN+TIS AKNEVK LI+  +   L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            E EPGRTM +SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KK EF+ +F+YE +D  W+P+YM PE VEDLKTIRE R+VF+AEVQKLEADR  
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            LG+EIATTG+N+WP+PVN+KRLI NAQKTFKIDFRR SDMHP++IVE +DKLQERLKVV 
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            G+D LS EAQKNATLFFNILLRS+ ASKRVL +YRLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            PE ++ KERAK+VQCALEYTTLRSVT ATEVWYDPDPMSTII ED++FVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
             P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGEL DES EDDVFLKKIESNMLTEMALRGIPDINKVFIK  KVNKF++ EGF+ 
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
            + EWMLDTEGVNLLAVM HEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTG CAL LN+EMLK AIE+ LPSY++G L+FGMTP RSPI+GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDG-LDFGMTPSRSPISGT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYHEGMMSP+YLLSPN+RLSP SDAQFSPYV GMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535


>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1-like [Cucumis sativus]
          Length = 1832

 Score = 2738 bits (7097), Expect = 0.0
 Identities = 1355/1536 (88%), Positives = 1439/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP+SPAEVAKV++VQFGILSPDEIRQMSVV IEHGETTERGKPK  GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVL+IMR VCFNCSK+L DEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA+RI+NPKNRL+KILDACKNKTKCEGGDEIDVQGQDS++PVKKSRGGCGAQQP I I
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM AEY           QLPEP ERKQ L+AE+VL +LKRI+D+DCKLLG NP+YAR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFI KDVFMN LMWWEDFDGKIPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R +AWH + E G ITPGDT VR+EKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADA+TME IN+TIS AKNEVK LI+  +   L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            E EPGRTM +SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KK EF+ +F+YE +D  W+P+YM PE VEDLKTIRE R+VF+AEVQKLEADR  
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            LG+EIATTG+N+WP+PVN+KRLI NAQKTFKIDFRR SDMHP++IVE +DKLQERLKVV 
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            G+D LS EAQKNATLFFNILLRS+ ASKRVL +YRLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            PE ++ KERAK+VQCALEYTTLRSVT ATEVWYDPDPMSTII ED++FVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
             P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGEL DES EDDVFLKKIESNMLTEMALRGIPDINKVFIK  KVNKF++ EGF+ 
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
            + EWMLDTEGVNLLAVM HEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTG CAL LN+EMLK AIE+ LPSY++G L+FGMTP RSPI+GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDG-LDFGMTPSRSPISGT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYHEGMMSP+YLLSPN+RLSP SDAQFSPYV GMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535


>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
            communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
            polymerase II largest subunit, putative [Ricinus
            communis]
          Length = 1855

 Score = 2737 bits (7095), Expect = 0.0
 Identities = 1353/1536 (88%), Positives = 1441/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP+SPAEVAKV++VQFGILSPDEIRQMSVV IE  ETTERGKPKPGGLSD RLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEFSETTERGKPKPGGLSDLRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSK+LADEED K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA++I+NPKNRLKKILDACKNKTKCEGGD+IDV  QD++EPVKKSRGGCGAQQP + I
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKTKCEGGDDIDVHSQDTDEPVKKSRGGCGAQQPRMTI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM+AEY           QLPEP ERKQ L+AE+VL VLKRISDDDC+LLGFNP+YAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDDDCRLLGFNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQE+ GAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEKGGAPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R AAWH D E+G ITPGDT+VR+EKGELLSGT+CKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LIRTAAWHSDSERGVITPGDTLVRIEKGELLSGTVCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQNGFS+GIGDTIADA+TME IN+TIS AKN VKELI   +N +L
Sbjct: 661  RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNAVKELIRKAQNKEL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            E +PGRTM ESFEN VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPKPGRTMMESFENEVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIPYGF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KKSEFD +FKYE+DD  W P YM+ + ++DLK IRE+R VFDAEVQKLEADR  
Sbjct: 901  LDSLKMKKSEFDRVFKYELDDENWNPTYMYQDHIDDLKNIRELRDVFDAEVQKLEADRYQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            LG+EIATTGD++WPLPVN++RLI NAQKTFK+D RRPSD+HP++ VE VDKLQERLKVV 
Sbjct: 961  LGTEIATTGDSSWPLPVNLRRLIWNAQKTFKVDKRRPSDIHPMEAVEAVDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            GDD LS EAQKNATLFF ILLRS+LASKRVL+DYRLT+EAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDPLSVEAQKNATLFFGILLRSTLASKRVLEDYRLTREAFDWVIGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS++L 
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIFLI 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            PE ++ KERAK+VQCALEYTTLRSVT ATEVWYDPDPMSTII EDV+FVKSYYEMPDEEI
Sbjct: 1141 PECNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
             P+KISPWLLRIELNREMMVDKKL+MADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLNMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGELNDES EDDVFLKKIESNMLTEMALRGIPDINKVFIK +KV+KF++ EGF+ 
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQSKVSKFDENEGFKT 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
              EWMLDTEGVNLLAVMC+E+VDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 IEEWMLDTEGVNLLAVMCNENVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAV+AE D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEADY 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTGDCAL LN++MLK AIE+ LPSYM+G L+FGMTP RSP++ T
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDDMLKNAIELQLPSYMDG-LDFGMTPARSPVSVT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYH+GMMSPSYLLSP++RLSP +DAQFSPYVSGM F
Sbjct: 1500 PYHDGMMSPSYLLSPSLRLSPTTDAQFSPYVSGMPF 1535


>gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
          Length = 1844

 Score = 2736 bits (7093), Expect = 0.0
 Identities = 1357/1536 (88%), Positives = 1437/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP SPAEVAKV+ VQFGILSPDEIRQMSVV IEH ET   GKPK  GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSK+L DE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA+RI++PKNRLKKILDACKNKTKC+GGDEIDVQGQ+SEEPVKKSRGGCGAQQP + I
Sbjct: 121  FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM AEY           QLPEP ERKQ L+AE+VLSVLKRISD+D +LLG NP+YAR
Sbjct: 181  EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            LQR +AWH + E G ITPGDT VR+EKGELL+GTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADA+TME IN+TISKAKNEVK+LI   ++ +L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            EAEPGRTM +SFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIPYGF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KKSEFD  F YE+DD  W PDYM  E VEDLKTIRE R+VFDAEVQKLE DRL 
Sbjct: 901  LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            LG+EIA TGDN+WPLPVN+KRLI NAQKTFKIDFRR SDMHP++IVE +DKLQERLKVV 
Sbjct: 961  LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            GDD LS EAQKNATLFF+ILLRS+ ASKRVL +YRLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            PE ++ KERAK+VQCALEYTTLRSVT ATEVWYDPDPMSTII EDV+FV SYYEMPDEE+
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEV 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
            +PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            N EAPKGEL DES EDDVFLKKIESNMLTEMALRGIPDINKVFIK+ KVNKF+  EGF+A
Sbjct: 1261 NAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
            + EWMLDTEGVNLLAV+CH+DVDA+RTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVFAETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYM+G L+FGMTP RSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDG-LDFGMTPSRSPVSGT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYHEGMMSP+YLLSPN+RLSP SDAQFSPYV GMAF
Sbjct: 1500 PYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535


>gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
            cacao] gi|508698846|gb|EOX90742.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
          Length = 1861

 Score = 2733 bits (7085), Expect = 0.0
 Identities = 1350/1537 (87%), Positives = 1444/1537 (93%), Gaps = 2/1537 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP+SPAEVAKV++VQFGILSPDEIRQMSVV IEHGETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSK+LADEE+ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA++I+NPKNRLKKILDACKNK+KCEGGDEIDVQGQD+EEPVKKSRGGCGAQQP + I
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            DGMKM+AEY           QLPEP ERKQ L+AE+VLSVLKRISD+DC+LLG NP++AR
Sbjct: 181  DGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTH LAMIIRHNENL++QERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L RN+AWH + E G ITPGDT VR+EKGELLSGTLCKKALGTS+GSLIHVIWEEVGPDAA
Sbjct: 601  LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADA+TME IN+TISKAK EVK LI   +N  L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            E EPGRTM ESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQP-DYMHPEAVEDLKTIREIRSVFDAEVQKLEADRL 3240
            L++LK+KKSEFD +F+Y IDD +W P  YM PE +EDL+TI+E+R VF+AEVQKL+ADR 
Sbjct: 901  LDSLKMKKSEFDRVFRYNIDDESWNPTSYMLPEHIEDLRTIQELRDVFEAEVQKLDADRY 960

Query: 3239 LLGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVV 3060
             LG+EIA TGD+ WPLPVN+KRLI NAQKTFK+DFRR SD+HP++IV+ VDKLQERLKVV
Sbjct: 961  QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020

Query: 3059 HGDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAP 2880
             G D LS EAQKNATLFF+ILLRS+LASKRVL++YRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGTDPLSVEAQKNATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080

Query: 2879 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2700
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140

Query: 2699 KPEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEE 2520
             PE S+ KE+AK+VQCALEYTTLRSVTHATEVWYDPDP STII ED++FVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDIDFVKSYYEMPDEE 1200

Query: 2519 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 2340
            + P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260

Query: 2339 MNDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFR 2163
            MNDE PKGELNDES EDDVFLKKIESNMLTEMALRGIPDINKVFIK++K +KF++ +G++
Sbjct: 1261 MNDEGPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320

Query: 2162 ADNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1983
               EW+LDTEGVNLLAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380

Query: 1982 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETD 1803
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440

Query: 1802 HLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITG 1623
            +LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYMEG LEFGMTP RSP++G
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEG-LEFGMTPARSPVSG 1499

Query: 1622 TPYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            TPYHEGMMSPSYLLSPN+RLSP +DAQFSPYV GMAF
Sbjct: 1500 TPYHEGMMSPSYLLSPNLRLSPITDAQFSPYVGGMAF 1536


>ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor]
            gi|241940227|gb|EES13372.1| hypothetical protein
            SORBIDRAFT_07g003680 [Sorghum bicolor]
          Length = 1857

 Score = 2732 bits (7082), Expect = 0.0
 Identities = 1355/1537 (88%), Positives = 1443/1537 (93%), Gaps = 2/1537 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP+SPAEVAKV+LVQFGILSPDEIRQMSVV IEH ET ERGKPKPGGLSDPRLGTI
Sbjct: 1    MDARFPYSPAEVAKVELVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRKIKCETCMA MAEC GHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSK+LADE++ K
Sbjct: 61   DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDETK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA++IRNPKNRLK+I DACK+K  C GGD++DVQ QD++EPVKK RGGCGAQQPNI +
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQDTDEPVKK-RGGCGAQQPNITV 179

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            DGMKMVAE+           QLPEP ERKQ LSAE+VL+VLKRISD+DC LLG NP+YAR
Sbjct: 180  DGMKMVAEFKAPKKKSDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYAR 239

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNGAPAHII+
Sbjct: 240  PDWMILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIT 299

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 300  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 359

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 360  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 419

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            +DGQRLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 420  EDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 479

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 480  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 539

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDT IEKDVFMNILMWW+DFDGKIPAPAILKPRP+WTGKQVFNLIIPKQIN
Sbjct: 540  LLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQIN 599

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R +AWH ++EKG ITPGDT+VR+EKGELLSGTLCKK+LGT TGSLIH+IWEEVGPDAA
Sbjct: 600  LIRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGTGSLIHIIWEEVGPDAA 659

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQNGFS+GIGDTIADASTM+TINDTI KAK+EVKELI+     +L
Sbjct: 660  RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMQTINDTICKAKDEVKELIKKAHEKQL 719

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            EAEPGRTM ESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 720  EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 779

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 780  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 839

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 840  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 899

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KK EFD++F+YE+DD  W+P+YM PE V+DLKTIRE R+VF+AEVQKLEADR  
Sbjct: 900  LDSLKMKKPEFDNLFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRYQ 959

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            LG+EIATTGDN+WP+PVN+KRLI NAQKTF+IDFRRPSDMHP++IVE VDKLQERLKVV 
Sbjct: 960  LGTEIATTGDNSWPMPVNLKRLIWNAQKTFRIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1019

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            GDD +S EAQKNATLFFNILLRS+ ASKRVLK+YRLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1020 GDDPMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPG 1079

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1080 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1139

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            PEV++ KE AK+VQCALEYTTLRSVTHATE+WYDPDP+ TII ED EFV+SYYEMPDE+I
Sbjct: 1140 PEVNQKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDAEFVQSYYEMPDEDI 1199

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
            DPDKISPWLLRIELNREMMVDKKLSMADIA+KIN EFDDDL+CIFNDDNADKLILRIRI 
Sbjct: 1200 DPDKISPWLLRIELNREMMVDKKLSMADIADKINREFDDDLSCIFNDDNADKLILRIRIT 1259

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGE+ DES EDDVFLKKIE NMLTEMALRGIPDINKVFIK  KVN F Q+EGF+A
Sbjct: 1260 NDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKEGKVNTFYQDEGFKA 1319

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
             NEWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1320 ANEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAV+AE+DH
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDH 1439

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTG CAL LN++ML+QAIE+ LPSY+EG L+FGMTP RSPI+GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEG-LDFGMTPARSPISGT 1498

Query: 1619 PYHEGMMSPSYLLSPNVRLSPA-SDAQFSPYVSGMAF 1512
            PYHEGMMSPSYLLSPN+R SP  +DA FSPYV  MAF
Sbjct: 1499 PYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1535


>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
            brachyantha]
          Length = 1855

 Score = 2731 bits (7079), Expect = 0.0
 Identities = 1354/1537 (88%), Positives = 1440/1537 (93%), Gaps = 2/1537 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP+SPAEVAKV+LVQFGILSPDEIRQMSVV IEH ET ERGKPKPGGLSDPRLGTI
Sbjct: 1    MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRKIKCETCMA MAEC GHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSK+LADE+D K
Sbjct: 61   DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQ-DSEEPVKKSRGGCGAQQPNIK 5580
            FKQA++IRNPKNRLK+I DACK+K  C GGD++DVQ Q D++EPVK+ RGGCGAQQPNI 
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKR-RGGCGAQQPNIT 179

Query: 5579 IDGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYA 5400
            +DGMKMVAE+           QLPEP ERKQ LSAE+VL+VLKRISD+DC LLG NP++A
Sbjct: 180  VDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 5399 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHII 5220
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNGAPAHII
Sbjct: 240  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 5219 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 5040
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359

Query: 5039 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4860
            RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360  RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419

Query: 4859 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4680
            R+DGQRLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420  REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479

Query: 4679 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4500
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539

Query: 4499 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4320
            TLLGCRKITKRDT IEKDVFMNILMWWEDFDGK+PAPAILKPRP+WTGKQVFNLIIPK I
Sbjct: 540  TLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPI 599

Query: 4319 NLQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 4140
            NL R +AWH + E G ITPGDT+VR+EKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDA
Sbjct: 600  NLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 659

Query: 4139 ARKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNK 3960
            ARKFLGHTQWLVNYWLLQNGFS+GIGDTIADA+TME IN+TIS AKNEVKELI+   +  
Sbjct: 660  ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISTAKNEVKELIKQAHDKH 719

Query: 3959 LEAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3780
            LEAEPGRTM ESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779

Query: 3779 TACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGR 3600
            TACVGQQNVEGKRIP+GF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780  TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839

Query: 3599 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3420
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899

Query: 3419 KLEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRL 3240
            KL++LK+KK EFD +F+YE+DD  W+P+YM PE VEDLKTIRE R+VF+AEVQKLEADR 
Sbjct: 900  KLDSLKMKKGEFDTVFRYELDDENWRPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRF 959

Query: 3239 LLGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVV 3060
             LG+EIATTGDNTWP+PVN+KRLI NAQKTFKID RRPSDMHP++IVE +DKLQERLKVV
Sbjct: 960  QLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1019

Query: 3059 HGDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAP 2880
             GDD +S EAQKNATLFFNILLRS+ ASKRVLK+YRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079

Query: 2879 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2700
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139

Query: 2699 KPEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEE 2520
            KPEV++ KE AK+VQCALEYTTLRSVTHATE+WYDPDP+ TII EDVEFV+SYYEMPDE+
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199

Query: 2519 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 2340
            +DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDL+CIFNDDNADKLILR+RI
Sbjct: 1200 VDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRI 1259

Query: 2339 MNDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFR 2163
             NDEAPKGE+ DES EDDVFLKKIESNMLTEMALRGIPDINKVFIK  KVNKF   +GF+
Sbjct: 1260 TNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYGKVNKFEDNDGFK 1319

Query: 2162 ADNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1983
             DNEWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1320 PDNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1379

Query: 1982 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETD 1803
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAV+AE+D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1439

Query: 1802 HLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITG 1623
            +LRGVTENIMLGQLAPIGTG CAL LN++ML+QAIE+ LPSY+EG L+FGMTP RSPI+G
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEG-LDFGMTPARSPISG 1498

Query: 1622 TPYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            TPYHEGMMSPSYLLSPN+R SP +DAQFSPYV GMAF
Sbjct: 1499 TPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1535


>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
            [Citrus sinensis]
          Length = 1963

 Score = 2730 bits (7077), Expect = 0.0
 Identities = 1348/1536 (87%), Positives = 1437/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MDTRFP+SPAEVAKV++VQFGILSPDEIRQMSVV IEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSK+LADE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA++IRNPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK++GGCGAQQP + I
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM+AEY           QLPEP ERKQ L+AE+VL VLKRISD+DC+LLG NP+YAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P P ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R AAWH D++KG +T GDT+VR+EKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADA TMETINDTISKAKN VK LI+  ++  L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            E EPGRTM ESFEN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GFVDRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KKSEFD  F++E+D+  W P+YM  E ++DLKTI+E+R VFDAEVQKLEADR  
Sbjct: 901  LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            L +EIAT+GD++WPLPVN+KRLI NAQKTFK+D RRPSDMHP+++VE VDKLQERLKVV 
Sbjct: 961  LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            G+D LS EAQKNATLFFNILLRS+ ASKRVLK++RLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            P V+  KERAK+VQCALEYTTLRSVT ATEVWYDPDPM TII EDVEFVKSYYEMPDE+I
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
             P+KISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNADKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGELNDES EDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  K++  EGF++
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
            ++EWMLDTEGVNLLAVMCHEDVDA+RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVFAE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTGDC+L LN+EMLK AIE+ LPSYMEG LEFGMTP RSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEG-LEFGMTPARSPVSGT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYH+GMMSP YL SPN+RLSP +DAQFSPYV GMAF
Sbjct: 1500 PYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
            [Citrus sinensis]
          Length = 1853

 Score = 2730 bits (7077), Expect = 0.0
 Identities = 1348/1536 (87%), Positives = 1437/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MDTRFP+SPAEVAKV++VQFGILSPDEIRQMSVV IEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSK+LADE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA++IRNPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK++GGCGAQQP + I
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM+AEY           QLPEP ERKQ L+AE+VL VLKRISD+DC+LLG NP+YAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P P ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R AAWH D++KG +T GDT+VR+EKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADA TMETINDTISKAKN VK LI+  ++  L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            E EPGRTM ESFEN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GFVDRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KKSEFD  F++E+D+  W P+YM  E ++DLKTI+E+R VFDAEVQKLEADR  
Sbjct: 901  LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            L +EIAT+GD++WPLPVN+KRLI NAQKTFK+D RRPSDMHP+++VE VDKLQERLKVV 
Sbjct: 961  LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            G+D LS EAQKNATLFFNILLRS+ ASKRVLK++RLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            P V+  KERAK+VQCALEYTTLRSVT ATEVWYDPDPM TII EDVEFVKSYYEMPDE+I
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
             P+KISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNADKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGELNDES EDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  K++  EGF++
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
            ++EWMLDTEGVNLLAVMCHEDVDA+RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVFAE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTGDC+L LN+EMLK AIE+ LPSYMEG LEFGMTP RSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEG-LEFGMTPARSPVSGT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYH+GMMSP YL SPN+RLSP +DAQFSPYV GMAF
Sbjct: 1500 PYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
            [Citrus sinensis]
          Length = 1790

 Score = 2730 bits (7077), Expect = 0.0
 Identities = 1348/1536 (87%), Positives = 1437/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MDTRFP+SPAEVAKV++VQFGILSPDEIRQMSVV IEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSK+LADE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA++IRNPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK++GGCGAQQP + I
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM+AEY           QLPEP ERKQ L+AE+VL VLKRISD+DC+LLG NP+YAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P P ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R AAWH D++KG +T GDT+VR+EKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADA TMETINDTISKAKN VK LI+  ++  L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            E EPGRTM ESFEN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GFVDRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KKSEFD  F++E+D+  W P+YM  E ++DLKTI+E+R VFDAEVQKLEADR  
Sbjct: 901  LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            L +EIAT+GD++WPLPVN+KRLI NAQKTFK+D RRPSDMHP+++VE VDKLQERLKVV 
Sbjct: 961  LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            G+D LS EAQKNATLFFNILLRS+ ASKRVLK++RLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            P V+  KERAK+VQCALEYTTLRSVT ATEVWYDPDPM TII EDVEFVKSYYEMPDE+I
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
             P+KISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNADKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGELNDES EDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  K++  EGF++
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
            ++EWMLDTEGVNLLAVMCHEDVDA+RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVFAE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTGDC+L LN+EMLK AIE+ LPSYMEG LEFGMTP RSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEG-LEFGMTPARSPVSGT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYH+GMMSP YL SPN+RLSP +DAQFSPYV GMAF
Sbjct: 1500 PYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Citrus sinensis] gi|568825318|ref|XP_006467028.1|
            PREDICTED: DNA-directed RNA polymerase II subunit 1-like
            isoform X2 [Citrus sinensis]
          Length = 1860

 Score = 2730 bits (7077), Expect = 0.0
 Identities = 1348/1536 (87%), Positives = 1437/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MDTRFP+SPAEVAKV++VQFGILSPDEIRQMSVV IEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSK+LADE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA++IRNPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK++GGCGAQQP + I
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM+AEY           QLPEP ERKQ L+AE+VL VLKRISD+DC+LLG NP+YAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P P ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R AAWH D++KG +T GDT+VR+EKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADA TMETINDTISKAKN VK LI+  ++  L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            E EPGRTM ESFEN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GFVDRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KKSEFD  F++E+D+  W P+YM  E ++DLKTI+E+R VFDAEVQKLEADR  
Sbjct: 901  LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            L +EIAT+GD++WPLPVN+KRLI NAQKTFK+D RRPSDMHP+++VE VDKLQERLKVV 
Sbjct: 961  LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            G+D LS EAQKNATLFFNILLRS+ ASKRVLK++RLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            P V+  KERAK+VQCALEYTTLRSVT ATEVWYDPDPM TII EDVEFVKSYYEMPDE+I
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
             P+KISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNADKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGELNDES EDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  K++  EGF++
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
            ++EWMLDTEGVNLLAVMCHEDVDA+RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVFAE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTGDC+L LN+EMLK AIE+ LPSYMEG LEFGMTP RSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEG-LEFGMTPARSPVSGT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYH+GMMSP YL SPN+RLSP +DAQFSPYV GMAF
Sbjct: 1500 PYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
            gi|557527347|gb|ESR38597.1| hypothetical protein
            CICLE_v10024686mg [Citrus clementina]
          Length = 1860

 Score = 2730 bits (7076), Expect = 0.0
 Identities = 1348/1536 (87%), Positives = 1436/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MDTRFP+SPAEVAKV++VQFGILSPDEIRQMSVV IEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLSIMR VCFNCSK+LADE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA++IRNPKNRLKKILDACKNKTKCEGGDEIDV GQD EEP+KK +GGCGAQQP + I
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKKKGGCGAQQPKLTI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM+AEY           QLPEP ERKQ L+AE+VL VLKRISD+DC+LLG NP+YAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P P ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R AAWH D++KG +T GDT+VR+EKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADA TMETINDTISKAKN VK LI+  ++  L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            E EPGRTM ESFEN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GFVDRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ 
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KKSEFD  F++E+D+  W P+YM  E ++DLKTI+E+R VFDAEVQKLEADR  
Sbjct: 901  LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            L +EIAT+GD++WPLPVN+KRLI NAQKTFK+D RRPSDMHP+++VE VDKLQERLKVV 
Sbjct: 961  LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            G+D LS EAQKNATLFFNILLRS+ ASKRVLK++RLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            P V+  KERAK+VQCALEYTTLRSVT ATEVWYDPDPM TII EDVEFVKSYYEMPDE+I
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
             P+KISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNADKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGELNDES EDDVFLKKIESNMLTEMALRGIPDINKVFIK  K  K++  EGF++
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
            ++EWMLDTEGVNLLAVMCHEDVDA+RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVFAE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTGDC+L LN+EMLK AIE+ LPSYMEG LEFGMTP RSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMEG-LEFGMTPARSPVSGT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYH+GMMSP YL SPN+RLSP +DAQFSPYV GMAF
Sbjct: 1500 PYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>gb|AFW57310.1| RNA polymerase II large subunit family protein [Zea mays]
          Length = 1850

 Score = 2727 bits (7070), Expect = 0.0
 Identities = 1351/1537 (87%), Positives = 1439/1537 (93%), Gaps = 2/1537 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP+SPAEVAKV+ VQFGILSPDEIRQMSV+ IEH ET ERGKPKPGGLSDPRLGTI
Sbjct: 1    MDARFPYSPAEVAKVEFVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRKIKCETCMA MAEC GHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSK+LADE++ K
Sbjct: 61   DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDETK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA++IRNPKNRLK+I DACK+K  C GGD++DVQ QD++EP+KK RGGCGAQQPNI +
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQDTDEPIKK-RGGCGAQQPNITV 179

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            DGMKMVAE+           QLPEP ERKQ LSAE+VL+VLKRISD+DC LLG NP+YAR
Sbjct: 180  DGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYAR 239

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNGAPAHII+
Sbjct: 240  PDWMILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIT 299

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 300  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 359

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 360  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 419

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            +DGQRLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 420  EDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 479

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 480  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 539

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDT IEKDVFMNILMWW+DFDGKIPAP ILKPRP+WTGKQVFNLIIPKQIN
Sbjct: 540  LLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPTILKPRPIWTGKQVFNLIIPKQIN 599

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R +AWH ++EKG ITPGDT+VR+EKGELLSGTLCKK+LGT +GSLIHVIWEEVGPDAA
Sbjct: 600  LIRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDAA 659

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQNGFS+GIGDTIADASTMETINDTISKAKN VKELI+     +L
Sbjct: 660  RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMETINDTISKAKNAVKELIKKAHEKQL 719

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            EAEPGRTM ESFENRVNQVLNKARDDAGSSAQ SLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 720  EAEPGRTMMESFENRVNQVLNKARDDAGSSAQNSLSESNNLKAMVTAGSKGSFINISQMT 779

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 780  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 839

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 840  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 899

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KK EFD++F+YE+DD  W+P+YM PE V+DLKTIRE R+VF+AEVQKLEADR  
Sbjct: 900  LDSLKMKKPEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRYQ 959

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            LGSEI TTGDN+WP+PVN+KRLI NAQKTFKIDFRRPSDMHP++IVE +DKLQERLKVV 
Sbjct: 960  LGSEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVVP 1019

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            GDD +S EAQKNATLFFNILLRS+ ASKRVLK+YRLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1020 GDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPG 1079

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1080 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1139

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            P+V++ KE AK+VQCALEYTTLRSVTHATE+WYDPDP+ TII ED EFV+SYYEMPDE+I
Sbjct: 1140 PQVNQKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDTEFVQSYYEMPDEDI 1199

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
            DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDL+CIFNDDNADKLILRIRI 
Sbjct: 1200 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRIT 1259

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGE+ DES EDDVFLKKIE NMLTEMALRGIPDINKVFIK  KVN F Q++GF+A
Sbjct: 1260 NDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKEGKVNTFYQDDGFKA 1319

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
             NEWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1320 ANEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAV+AE+DH
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDH 1439

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTG CAL LN++ML+QAIE+ LPSY+EG L+FGMTP RSPITGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEG-LDFGMTPARSPITGT 1498

Query: 1619 PYHEGMMSPSYLLSPNVRLSPA-SDAQFSPYVSGMAF 1512
            PYHEGMMSPSYLLSPN+R SP  +DA FSPYV  MAF
Sbjct: 1499 PYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1535


>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
            max]
          Length = 1827

 Score = 2725 bits (7064), Expect = 0.0
 Identities = 1347/1536 (87%), Positives = 1436/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP SPAEVAKV++VQFGILSPDEIRQMSVV IEHGETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC A+MAEC GHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSK+LADE D K
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA+RIRNPKNRLKKILDACKNK+KCEGGDEID+ GQD++EPVKKSRGGCGAQQP I I
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM+AEY           QLPEP ERKQ LSAE+VL VLKRISD+DC+LLG NP+YAR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLK+QERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFI KDVFMNILMWWEDFDGK+PAPAILKP PLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R ++WH + E+G ITPGDT+VR+EKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADASTMETIN TIS AK +VK+LI   +  KL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAQEKKL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            EAEPGRTM +SFENRVNQ LN+ARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIPYGF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KK+EFD +F+YE DD  W+P YM  E VEDLKTIRE R+VF+AEVQKLEADR  
Sbjct: 901  LDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            L +EIATTGD++ PLPVN+KRLI NAQKTFK+DFRRPSDMHP++IVE +DKLQERLKVV 
Sbjct: 961  LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            G+D LS+EAQKNATL FNILLRS+ ASKRVL++YRL++EAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLR 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
             +V + KERAKSVQCALEYTTLRSVT ATEVWYDPDPMSTII ED +FVKSYYEMPDEE+
Sbjct: 1141 SDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPDEEV 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
              +KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGE+ DES EDDVFLKKIESNMLTEM LRGIPDINKVFIKNTKV KF++ +GF+ 
Sbjct: 1261 NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDENQGFKP 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
            + EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 NEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTG+CAL LN+EMLK AIE+ LPSYM+G L+FGMTP RSPI+GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMDG-LDFGMTPARSPISGT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYHEG+MSPSYLLSPN+RLSP SDAQFSPYV GMAF
Sbjct: 1500 PYHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAF 1535


>ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
            X2 [Setaria italica]
          Length = 1852

 Score = 2724 bits (7062), Expect = 0.0
 Identities = 1352/1538 (87%), Positives = 1441/1538 (93%), Gaps = 3/1538 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP+SPAEVAKV+LVQFGILSPDEIRQMSV+ IEH ET ERGKPKPGGLSDPRLGTI
Sbjct: 1    MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRKIKCETCMA MAEC GHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSK+LADE+D K
Sbjct: 61   DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQ-DSEEPVKKSRGGCGAQQPNIK 5580
            FKQA++IRNPKNRLK+I DACK+K  C GGD++DVQ Q D++EPVKK RGGCGAQQPNI 
Sbjct: 121  FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179

Query: 5579 IDGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYA 5400
            +DGMKMVAE+           QLPEP ERKQ LSAE+VL+VLKRISD+DC LLG NP++A
Sbjct: 180  VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 5399 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHII 5220
            RPDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNGAPAHII
Sbjct: 240  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 5219 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 5040
            +EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300  TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359

Query: 5039 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4860
            RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360  RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419

Query: 4859 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4680
            R+DGQRLDLRY+KKSSDQHL+LGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420  REDGQRLDLRYVKKSSDQHLDLGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479

Query: 4679 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4500
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539

Query: 4499 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4320
            TLLGCRKITKRDT IEKDVFMNILMWW+DFDGKIPAPAILKPRP+WTGKQVFNLIIPKQI
Sbjct: 540  TLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQI 599

Query: 4319 NLQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 4140
            NL R +AWH + E G ITPGDT+VR+EKGELLSGTLCKK+LGT +GSLIHVIWEEVGPDA
Sbjct: 600  NLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDA 659

Query: 4139 ARKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNK 3960
            ARKFLGHTQWLVNYWLLQ GFS+GIGDTIADA+TME IN+TISKAKNEVKELI+    N 
Sbjct: 660  ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISKAKNEVKELIKQAHENH 719

Query: 3959 LEAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3780
            LEAEPGRTM ESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720  LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779

Query: 3779 TACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGR 3600
            TACVGQQNVEGKRIP+GF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780  TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839

Query: 3599 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3420
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899

Query: 3419 KLEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRL 3240
            KL++LK+KK EFD++F+YE+DD  W+P+YM PE V+DLKTIRE R+VF+AEVQKLEADR 
Sbjct: 900  KLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRF 959

Query: 3239 LLGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVV 3060
             LG+EI TTGDN+WP+PVN+KRLI NAQKTFKIDFRRPSDMHP++IVE +DKLQERLKVV
Sbjct: 960  QLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVV 1019

Query: 3059 HGDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAP 2880
             GDD +S EAQKNATLFFNILLRS+ ASKRVLK+YRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079

Query: 2879 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2700
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139

Query: 2699 KPEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEE 2520
            KPEV++ KE AK+VQCALEYTTLRSVTHATE+WYDPDP+ TII EDVEFV+SYYEMPDE+
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199

Query: 2519 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 2340
            IDPDKISPWLLRIELNREMM+DKKLSMADIAEKIN EFDDDL+CIFNDDNADKLILRIRI
Sbjct: 1200 IDPDKISPWLLRIELNREMMIDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRI 1259

Query: 2339 MNDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFR 2163
             ND+APKGE+ DES EDDVFLKKIE NMLTEMALRGIPDINKVFIK+ KVNKF+Q EGF+
Sbjct: 1260 TNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHGKVNKFDQSEGFK 1319

Query: 2162 ADNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1983
            ADNEWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1320 ADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379

Query: 1982 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETD 1803
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAV+AE D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEAD 1439

Query: 1802 HLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITG 1623
             LRGVTENIMLGQLAPIGTG CAL LN++ML+QAIE+ LPSY+EG L+FGMTP RSPI+G
Sbjct: 1440 LLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEG-LDFGMTPARSPISG 1498

Query: 1622 TPYHEGMMSPSYLLSPNVRLSPA-SDAQFSPYVSGMAF 1512
            TPYHEGMMSPSYLLSPN+R SP  +DA FSPYV  MAF
Sbjct: 1499 TPYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1536


>ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer
            arietinum]
          Length = 1834

 Score = 2724 bits (7062), Expect = 0.0
 Identities = 1346/1536 (87%), Positives = 1438/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP SPAEVAKV++VQFGILSPDEIRQMSVV IEHGETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC A+MAEC GHFG+LELAKPMFHIGF+KTVLSIMRCVCFNCSK+LADE+D K
Sbjct: 61   DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEQDHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FKQA+RI++PKNRL+KILDACKNKTKCEGGD+ID+ G D+EEPVKKSRGGCGAQQP I I
Sbjct: 121  FKQALRIKSPKNRLRKILDACKNKTKCEGGDDIDMPGHDTEEPVKKSRGGCGAQQPKITI 180

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            +GMKM+AEY           QLPEP ERKQ LSAE+VL VLKRISD+DC+LLG NP+YAR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDW+ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENLK+QERNG+PAHIIS
Sbjct: 241  PDWLILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD+
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDS 540

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFI KDVFMNILMWWEDFDGK+P P ILKP P+WTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFISKDVFMNILMWWEDFDGKVPTPTILKPEPMWTGKQVFNLIIPKQIN 600

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            L R ++WH ++EKGPITPGDT+VR+EKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LIRYSSWHNENEKGPITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADASTMETIN TIS+AK +VK+LI   +  KL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISQAKEKVKQLIREAQEKKL 720

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            EAEPGRTM ESFENRVNQ LN+ARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIP+GF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KK++FD  F+YE DD  W+P YM  E VEDLKTIRE R+VF+AEVQKL+ADR  
Sbjct: 901  LDSLKMKKADFDRAFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLDADRFQ 960

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            L +EIATTGD++ PLPVN+KRLI NAQKTFK+DFRRPSDMHP++IVE +DKLQERLKVV 
Sbjct: 961  LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP 1020

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            GDD LS+EAQKNATL FNILLRS+ ASKRVL++YRL++EAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG 1080

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            PEV + KERAKSVQCALEYTTLRSVT ATEVWYDPDPMSTII EDV+FVKSYYEMPDEE+
Sbjct: 1141 PEVCKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
              +KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            NDEAPKGE+ DES EDDVFLKKIESNMLTEM LRGI DINKVFIKNTK+ KF++ EGF+ 
Sbjct: 1261 NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIADINKVFIKNTKIQKFDENEGFKP 1320

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
              EWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 YEEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTG+CALLLN+EMLK AIE+ LPSYMEG L+FGMTPGRSPI+ T
Sbjct: 1441 LRGVTENIMLGQLAPIGTGECALLLNDEMLKNAIELQLPSYMEG-LDFGMTPGRSPISAT 1499

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            PYHEG+MSPSYLLSPN+RLSP +DAQFSPYV GMAF
Sbjct: 1500 PYHEGLMSPSYLLSPNLRLSPTNDAQFSPYVGGMAF 1535


>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria
            vesca subsp. vesca]
          Length = 1842

 Score = 2724 bits (7061), Expect = 0.0
 Identities = 1349/1536 (87%), Positives = 1431/1536 (93%), Gaps = 1/1536 (0%)
 Frame = -2

Query: 6116 MDTRFPHSPAEVAKVKLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 5937
            MD RFP SP EVAKV+ VQFGILSPDEIRQMSVV IEH ET   GKPK  GLSDPRLGTI
Sbjct: 1    MDIRFPFSPCEVAKVRRVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60

Query: 5936 DRKIKCETCMANMAECAGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKVLADEEDPK 5757
            DRK+KCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSK+L DE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120

Query: 5756 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPNIKI 5577
            FK A+RI+NPKNRLKKILDACKNKTKCEGGDEIDVQ  D++EP+KKSRGGCGAQQP + I
Sbjct: 121  FKTALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQ--DTDEPLKKSRGGCGAQQPKLTI 178

Query: 5576 DGMKMVAEYXXXXXXXXXXXQLPEPAERKQQLSAEKVLSVLKRISDDDCKLLGFNPQYAR 5397
            DGMKMVAEY           QLPEP ERKQ L+AE+VLSVLKRISD+DC+LLG NP+YAR
Sbjct: 179  DGMKMVAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 238

Query: 5396 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 5217
            PDWMILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNG+PAHIIS
Sbjct: 239  PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 298

Query: 5216 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 5037
            EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 299  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 358

Query: 5036 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4857
            TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 359  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 418

Query: 4856 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 4677
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 419  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 478

Query: 4676 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 4497
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 479  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 538

Query: 4496 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 4317
            LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 539  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 598

Query: 4316 LQRNAAWHQDDEKGPITPGDTVVRVEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 4137
            LQR +AWH + E G ITPGDT VR+EKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 599  LQRTSAWHSESETGNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 658

Query: 4136 RKFLGHTQWLVNYWLLQNGFSMGIGDTIADASTMETINDTISKAKNEVKELIEMYKNNKL 3957
            RKFLGHTQWLVNYWLLQN FS+GIGDTIADA+TME IN+TISKAKNEVKELI   ++  L
Sbjct: 659  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQSKSL 718

Query: 3956 EAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 3777
            E EPGRTM +SFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 719  EPEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 778

Query: 3776 ACVGQQNVEGKRIPYGFVDRTLPHFLKEDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 3597
            ACVGQQNVEGKRIPYGF+DRTLPHF K+D GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 779  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 838

Query: 3596 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 3417
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 839  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 898

Query: 3416 LEALKVKKSEFDDMFKYEIDDPTWQPDYMHPEAVEDLKTIREIRSVFDAEVQKLEADRLL 3237
            L++LK+KK EFD  F Y  DD  W PDYM PE VEDLKTIRE R+VFDAEV KLE DRL 
Sbjct: 899  LDSLKMKKKEFDKTFAYVFDDENWNPDYMLPEHVEDLKTIREFRNVFDAEVSKLETDRLQ 958

Query: 3236 LGSEIATTGDNTWPLPVNIKRLISNAQKTFKIDFRRPSDMHPLQIVEFVDKLQERLKVVH 3057
            LG+EIA TGDN+WPLPVN+KRLI NAQKTFKIDFRR SDMHP++IVE +DKLQERL+VV 
Sbjct: 959  LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLRVVP 1018

Query: 3056 GDDYLSKEAQKNATLFFNILLRSSLASKRVLKDYRLTQEAFEWVIGEIESRFLQSLVAPG 2877
            GDD LS EAQKNATLFFNILLRS+ ASKRVL++YRLT+EAFEWVIGEIESRFLQSLVAPG
Sbjct: 1019 GDDLLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLVAPG 1078

Query: 2876 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 2697
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1079 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1138

Query: 2696 PEVSRAKERAKSVQCALEYTTLRSVTHATEVWYDPDPMSTIIPEDVEFVKSYYEMPDEEI 2517
            PE ++ KERAK+VQCALEYTTLRSVT ATEVWYDPDPMST+I ED++FV+SYYEMPDEE+
Sbjct: 1139 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDLDFVRSYYEMPDEEV 1198

Query: 2516 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 2337
            +PDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNA+KLILRIRIM
Sbjct: 1199 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDGDLTCIFNDDNAEKLILRIRIM 1258

Query: 2336 NDEAPKGELNDES-EDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVNKFNQEEGFRA 2160
            N+E PKG+  DES EDDVFLKKIESNMLTEMALRGIPDINKVFIK+ KVNKF+Q EGF+A
Sbjct: 1259 NEETPKGDSQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKA 1318

Query: 2159 DNEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1980
            + EWMLDTEGVNLLAV+CH+DVDAKRTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1319 EQEWMLDTEGVNLLAVLCHDDVDAKRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1378

Query: 1979 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1800
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDA+VFAETDH
Sbjct: 1379 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDASVFAETDH 1438

Query: 1799 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGNLEFGMTPGRSPITGT 1620
            LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSY++G L+FGMTP RSP++GT
Sbjct: 1439 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYVDG-LDFGMTPSRSPVSGT 1497

Query: 1619 PYHEGMMSPSYLLSPNVRLSPASDAQFSPYVSGMAF 1512
            P+ +GMMSP+YLLSPN+R+SP SDAQFSPYV GMAF
Sbjct: 1498 PFRDGMMSPNYLLSPNMRMSPISDAQFSPYVGGMAF 1533