BLASTX nr result

ID: Catharanthus23_contig00003207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00003207
         (477 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249622.1| PREDICTED: histone deacetylase HDT1-like [So...   166   2e-39
ref|XP_006338944.1| PREDICTED: histone deacetylase HDT1-like [So...   166   3e-39
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]       164   1e-38
gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]       163   3e-38
gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]       162   3e-38
ref|XP_006341171.1| PREDICTED: histone deacetylase HDT1-like [So...   158   8e-37
gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]        158   8e-37
sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; A...   158   8e-37
ref|XP_004246566.1| PREDICTED: histone deacetylase HDT1-like [So...   157   2e-36
gb|EPS72565.1| histone deacetylase 2a-like protein, partial [Gen...   147   2e-33
emb|CBI30242.3| unnamed protein product [Vitis vinifera]              136   3e-30
ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi...   135   4e-30
emb|CBI17088.3| unnamed protein product [Vitis vinifera]              135   4e-30
ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi...   135   4e-30
ref|XP_006430307.1| hypothetical protein CICLE_v10012182mg [Citr...   135   6e-30
ref|XP_006430306.1| hypothetical protein CICLE_v10012182mg [Citr...   135   6e-30
ref|XP_006481904.1| PREDICTED: histone deacetylase HDT1-like iso...   135   7e-30
ref|XP_006481903.1| PREDICTED: histone deacetylase HDT1-like iso...   135   7e-30
ref|XP_006381322.1| hypothetical protein POPTR_0006s11770g [Popu...   133   2e-29
ref|XP_006381321.1| hypothetical protein POPTR_0006s11770g [Popu...   133   2e-29

>ref|XP_004249622.1| PREDICTED: histone deacetylase HDT1-like [Solanum lycopersicum]
          Length = 287

 Score =  166 bits (421), Expect = 2e-39
 Identities = 78/100 (78%), Positives = 88/100 (88%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW +EVKSG+   VQPG+ MVLHLSQA+LGE+KK+K+SE V L V +DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGQPLSVQPGDDMVLHLSQASLGEVKKDKASEPVCLSVTIDGKKLVLGTLS 60

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANPFD 475
            DKLPQQQFDLVFDRDFELSHNWKNGSVYF+GY AANPF+
Sbjct: 61  LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPFE 100


>ref|XP_006338944.1| PREDICTED: histone deacetylase HDT1-like [Solanum tuberosum]
          Length = 287

 Score =  166 bits (420), Expect = 3e-39
 Identities = 76/100 (76%), Positives = 87/100 (87%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW +EVKSG+   VQPG+ M+LHLSQA+LGE+KK+K SE V L V +DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGQPLSVQPGDDMILHLSQASLGEVKKDKGSEPVCLSVTIDGKKLVLGTLS 60

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANPFD 475
            DKLPQQQFDLVFDRDFELSHNWKNGS+YF+GY AANPF+
Sbjct: 61  SDKLPQQQFDLVFDRDFELSHNWKNGSIYFFGYKAANPFE 100


>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score =  164 bits (414), Expect = 1e-38
 Identities = 78/100 (78%), Positives = 86/100 (86%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW +EVKSG+   VQPG+ MVLHLSQA+LGE KK+K SE V L VNVDGKKL LGTL 
Sbjct: 1   MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANPFD 475
            DKLPQQQFDLVFDRDFELSHNWKNGSVYF+GY AANP++
Sbjct: 61  LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYE 100


>gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
          Length = 294

 Score =  163 bits (412), Expect = 3e-38
 Identities = 78/100 (78%), Positives = 88/100 (88%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW +EVKSGE   VQPG+GMVLHLSQA+LGE+KK+K  +SV L VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKV-QSVCLSVNIDGKKLVLGTLN 59

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANPFD 475
            DK+PQQQFDLVFDRDFELSHNWKNGSVYF+GY A NPF+
Sbjct: 60  SDKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKATNPFE 99


>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score =  162 bits (411), Expect = 3e-38
 Identities = 77/100 (77%), Positives = 89/100 (89%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW +EVKSGE   VQPG+GMVLHLSQA+LGE+KK+K+ +SV L VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKA-QSVCLSVNIDGKKLVLGTLS 59

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANPFD 475
            DK+PQQQFDLVFDRDFELSHNWK+GSVYF+GY A NPF+
Sbjct: 60  SDKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATNPFE 99


>ref|XP_006341171.1| PREDICTED: histone deacetylase HDT1-like [Solanum tuberosum]
          Length = 269

 Score =  158 bits (399), Expect = 8e-37
 Identities = 77/100 (77%), Positives = 88/100 (88%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW +EVKSGE   VQPG+GMVLHLSQA+LGE+KK+KS ESV L VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKS-ESVCLSVNIDGKKLVLGTLN 59

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANPFD 475
            +K+PQQQFDLVFDRDFELSHN K+GSVYF+GY A NPF+
Sbjct: 60  SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFE 99


>gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]
          Length = 203

 Score =  158 bits (399), Expect = 8e-37
 Identities = 77/100 (77%), Positives = 88/100 (88%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW +EVKSGE   VQPG+GMVLHLSQA+LGE+KK+KS ESV L VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKS-ESVCLSVNIDGKKLVLGTLN 59

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANPFD 475
            +K+PQQQFDLVFDRDFELSHN K+GSVYF+GY A NPF+
Sbjct: 60  SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFE 99


>sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
           deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
           gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum
           chacoense]
          Length = 269

 Score =  158 bits (399), Expect = 8e-37
 Identities = 77/100 (77%), Positives = 88/100 (88%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW +EVKSGE   VQPG+GMVLHLSQA+LGE+KK+KS ESV L VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKS-ESVCLSVNIDGKKLVLGTLN 59

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANPFD 475
            +K+PQQQFDLVFDRDFELSHN K+GSVYF+GY A NPF+
Sbjct: 60  SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFE 99


>ref|XP_004246566.1| PREDICTED: histone deacetylase HDT1-like [Solanum lycopersicum]
          Length = 269

 Score =  157 bits (396), Expect = 2e-36
 Identities = 76/100 (76%), Positives = 87/100 (87%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW +EVKSGE   VQPG+GMVLHLSQA+LGE+KK+KS ES  L VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKS-ESACLSVNIDGKKLVLGTLN 59

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANPFD 475
            +K+PQQQFDLVFD+DFELSHN K+GSVYF+GY A NPFD
Sbjct: 60  SEKVPQQQFDLVFDKDFELSHNLKSGSVYFFGYKATNPFD 99


>gb|EPS72565.1| histone deacetylase 2a-like protein, partial [Genlisea aurea]
          Length = 293

 Score =  147 bits (370), Expect = 2e-33
 Identities = 69/92 (75%), Positives = 80/92 (86%)
 Frame = +2

Query: 194 EVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLFPDKLPQ 373
           EVKSGE+ KV PG+G VLHLSQA+LGE+KKEK +E+V L VNV G+KL+LGTLF +KLPQ
Sbjct: 3   EVKSGETHKVIPGDGYVLHLSQASLGELKKEKGNEAVYLSVNVKGQKLILGTLFTEKLPQ 62

Query: 374 QQFDLVFDRDFELSHNWKNGSVYFYGYLAANP 469
           QQFDLVFD DFE+SHNWK GSVYFYGY  +NP
Sbjct: 63  QQFDLVFDNDFEISHNWKKGSVYFYGYKCSNP 94


>emb|CBI30242.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score =  136 bits (343), Expect = 3e-30
 Identities = 63/97 (64%), Positives = 78/97 (80%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW  EVK+GE  +V PG+ M++H+SQA+LGEIKK+K +E V L+ N+ G+KLVLGTL 
Sbjct: 1   MEFWGVEVKAGEPLEVVPGDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLS 60

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAAN 466
            +K PQ  FDLVF++ FELSHNWKNGSVYF GY AAN
Sbjct: 61  AEKFPQISFDLVFEKKFELSHNWKNGSVYFCGYKAAN 97


>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 300

 Score =  135 bits (341), Expect = 4e-30
 Identities = 64/98 (65%), Positives = 77/98 (78%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW  EVK+GESFKV+  +  +LHLSQA LGE KKEK +ESV LF+ +D +KLVLGTL 
Sbjct: 1   MEFWGVEVKAGESFKVKSEDDKILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLL 60

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANP 469
           P  +PQ  FDLVFD++FELSHNWKNGSV+F GY +  P
Sbjct: 61  PANIPQLSFDLVFDKEFELSHNWKNGSVFFMGYKSVLP 98


>emb|CBI17088.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  135 bits (341), Expect = 4e-30
 Identities = 64/98 (65%), Positives = 77/98 (78%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW  EVK+GESFKV+  +  +LHLSQA LGE KKEK +ESV LF+ +D +KLVLGTL 
Sbjct: 1   MEFWGVEVKAGESFKVKSEDDKILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLL 60

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANP 469
           P  +PQ  FDLVFD++FELSHNWKNGSV+F GY +  P
Sbjct: 61  PANIPQLSFDLVFDKEFELSHNWKNGSVFFMGYKSVLP 98


>ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 307

 Score =  135 bits (341), Expect = 4e-30
 Identities = 63/98 (64%), Positives = 78/98 (79%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW  EVK+GE  +V PG+ M++H+SQA+LGEIKK+K +E V L+ N+ G+KLVLGTL 
Sbjct: 1   MEFWGVEVKAGEPLEVVPGDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLS 60

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANP 469
            +K PQ  FDLVF++ FELSHNWKNGSVYF GY AA P
Sbjct: 61  AEKFPQISFDLVFEKKFELSHNWKNGSVYFCGYKAAIP 98


>ref|XP_006430307.1| hypothetical protein CICLE_v10012182mg [Citrus clementina]
           gi|557532364|gb|ESR43547.1| hypothetical protein
           CICLE_v10012182mg [Citrus clementina]
          Length = 326

 Score =  135 bits (340), Expect = 6e-30
 Identities = 62/97 (63%), Positives = 75/97 (77%)
 Frame = +2

Query: 164 LQSAMEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVL 343
           + + MEFW  EVKSG+  K+ PG+  ++HLSQA+LGEIKK+K SESV L++ VD KKLVL
Sbjct: 1   MSTLMEFWGVEVKSGQPLKINPGDNKIVHLSQASLGEIKKDKGSESVYLYLKVDDKKLVL 60

Query: 344 GTLFPDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGY 454
           GTL   K PQ  FDL  ++DFELSHNWKNGSVYF GY
Sbjct: 61  GTLSAQKFPQLSFDLAIEKDFELSHNWKNGSVYFTGY 97


>ref|XP_006430306.1| hypothetical protein CICLE_v10012182mg [Citrus clementina]
           gi|557532363|gb|ESR43546.1| hypothetical protein
           CICLE_v10012182mg [Citrus clementina]
          Length = 325

 Score =  135 bits (340), Expect = 6e-30
 Identities = 62/97 (63%), Positives = 75/97 (77%)
 Frame = +2

Query: 164 LQSAMEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVL 343
           + + MEFW  EVKSG+  K+ PG+  ++HLSQA+LGEIKK+K SESV L++ VD KKLVL
Sbjct: 1   MSTLMEFWGVEVKSGQPLKINPGDNKIVHLSQASLGEIKKDKGSESVYLYLKVDDKKLVL 60

Query: 344 GTLFPDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGY 454
           GTL   K PQ  FDL  ++DFELSHNWKNGSVYF GY
Sbjct: 61  GTLSAQKFPQLSFDLAIEKDFELSHNWKNGSVYFTGY 97


>ref|XP_006481904.1| PREDICTED: histone deacetylase HDT1-like isoform X2 [Citrus
           sinensis]
          Length = 325

 Score =  135 bits (339), Expect = 7e-30
 Identities = 62/97 (63%), Positives = 75/97 (77%)
 Frame = +2

Query: 164 LQSAMEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVL 343
           + + MEFW  EVKSG+  K+ PG+  ++HLSQA+LGEIKK+K SESV L++ VD KKLVL
Sbjct: 1   MSTLMEFWGVEVKSGQPLKINPGDNKIVHLSQASLGEIKKDKGSESVYLYLKVDDKKLVL 60

Query: 344 GTLFPDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGY 454
           GTL   K PQ  FDL  ++DFELSHNWKNGSVYF GY
Sbjct: 61  GTLSAQKFPQFSFDLAIEKDFELSHNWKNGSVYFTGY 97


>ref|XP_006481903.1| PREDICTED: histone deacetylase HDT1-like isoform X1 [Citrus
           sinensis]
          Length = 326

 Score =  135 bits (339), Expect = 7e-30
 Identities = 62/97 (63%), Positives = 75/97 (77%)
 Frame = +2

Query: 164 LQSAMEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVL 343
           + + MEFW  EVKSG+  K+ PG+  ++HLSQA+LGEIKK+K SESV L++ VD KKLVL
Sbjct: 1   MSTLMEFWGVEVKSGQPLKINPGDNKIVHLSQASLGEIKKDKGSESVYLYLKVDDKKLVL 60

Query: 344 GTLFPDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGY 454
           GTL   K PQ  FDL  ++DFELSHNWKNGSVYF GY
Sbjct: 61  GTLSAQKFPQFSFDLAIEKDFELSHNWKNGSVYFTGY 97


>ref|XP_006381322.1| hypothetical protein POPTR_0006s11770g [Populus trichocarpa]
           gi|550336024|gb|ERP59119.1| hypothetical protein
           POPTR_0006s11770g [Populus trichocarpa]
          Length = 305

 Score =  133 bits (335), Expect = 2e-29
 Identities = 64/98 (65%), Positives = 76/98 (77%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW  EVK GE  +V+ G+G +LHLSQA LGE KK+K +ESV LFVN D +KLVLGTL 
Sbjct: 1   MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANP 469
            +K+PQ  FDLVF++DFELSHN KNGSV+F GY  A P
Sbjct: 61  HEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQP 98


>ref|XP_006381321.1| hypothetical protein POPTR_0006s11770g [Populus trichocarpa]
           gi|550336023|gb|ERP59118.1| hypothetical protein
           POPTR_0006s11770g [Populus trichocarpa]
          Length = 236

 Score =  133 bits (335), Expect = 2e-29
 Identities = 64/98 (65%), Positives = 76/98 (77%)
 Frame = +2

Query: 176 MEFWASEVKSGESFKVQPGEGMVLHLSQANLGEIKKEKSSESVALFVNVDGKKLVLGTLF 355
           MEFW  EVK GE  +V+ G+G +LHLSQA LGE KK+K +ESV LFVN D +KLVLGTL 
Sbjct: 1   MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60

Query: 356 PDKLPQQQFDLVFDRDFELSHNWKNGSVYFYGYLAANP 469
            +K+PQ  FDLVF++DFELSHN KNGSV+F GY  A P
Sbjct: 61  HEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQP 98


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