BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00003185
         (275 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323962.2| hypothetical protein POPTR_0017s01370g [Popu...   110   3e-22
ref|XP_002327484.1| predicted protein [Populus trichocarpa]           110   3e-22
ref|XP_002305261.1| pentatricopeptide repeat-containing family p...   109   4e-22
ref|XP_002881217.1| pentatricopeptide repeat-containing protein ...   106   4e-21
gb|AAM13880.1| unknown protein [Arabidopsis thaliana]                 105   5e-21
pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1...   105   6e-21
ref|NP_850186.1| proteinaceous RNase P 1 [Arabidopsis thaliana] ...   105   6e-21
gb|AAD15382.1| hypothetical protein [Arabidopsis thaliana]            105   6e-21
ref|XP_004486770.1| PREDICTED: proteinaceous RNase P 1, chloropl...   105   8e-21
ref|XP_006294023.1| hypothetical protein CARUB_v10023016mg [Caps...   105   8e-21
gb|EMJ26904.1| hypothetical protein PRUPE_ppa003560mg [Prunus pe...   104   1e-20
ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...   104   1e-20
ref|XP_006410352.1| hypothetical protein EUTSA_v10016443mg [Eutr...   103   2e-20
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
ref|XP_006353636.1| PREDICTED: proteinaceous RNase P 1, chloropl...   102   4e-20
ref|XP_004241814.1| PREDICTED: proteinaceous RNase P 1, chloropl...   102   4e-20
ref|XP_006484639.1| PREDICTED: proteinaceous RNase P 1, chloropl...   102   5e-20
ref|XP_006437491.1| hypothetical protein CICLE_v10031025mg [Citr...   102   5e-20
ref|XP_006437490.1| hypothetical protein CICLE_v10031025mg [Citr...   102   5e-20

>ref|XP_002323962.2| hypothetical protein POPTR_0017s01370g [Populus trichocarpa]
           gi|550319033|gb|EEF04095.2| hypothetical protein
           POPTR_0017s01370g [Populus trichocarpa]
          Length = 578

 Score =  110 bits (274), Expect = 3e-22
 Identities = 56/81 (69%), Positives = 60/81 (74%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D V PNE           A EDPEMAFDLVKQMK  GI+PKLRSYGP LFGFCKK MA 
Sbjct: 176 IDKVPPNEATFTNAARLASAMEDPEMAFDLVKQMKGFGILPKLRSYGPPLFGFCKKGMAD 235

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVDAHM+E  V+AEEPEL
Sbjct: 236 KAYEVDAHMIEYGVVAEEPEL 256


>ref|XP_002327484.1| predicted protein [Populus trichocarpa]
          Length = 486

 Score =  110 bits (274), Expect = 3e-22
 Identities = 56/81 (69%), Positives = 60/81 (74%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D V PNE           A EDPEMAFDLVKQMK  GI+PKLRSYGP LFGFCKK MA 
Sbjct: 84  IDKVPPNEATFTNAARLASAMEDPEMAFDLVKQMKGFGILPKLRSYGPPLFGFCKKGMAD 143

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVDAHM+E  V+AEEPEL
Sbjct: 144 KAYEVDAHMIEYGVVAEEPEL 164


>ref|XP_002305261.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222848225|gb|EEE85772.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 516

 Score =  109 bits (272), Expect = 4e-22
 Identities = 54/81 (66%), Positives = 59/81 (72%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D V PNE             EDPEMAFDLVKQMK  GI+PKLRSYGP LFGFCKK M  
Sbjct: 114 IDKVPPNEATFTNAARLASVMEDPEMAFDLVKQMKGFGIMPKLRSYGPPLFGFCKKGMVD 173

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVDAHM+E+ V+AEEPEL
Sbjct: 174 KAYEVDAHMIESGVVAEEPEL 194


>ref|XP_002881217.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327056|gb|EFH57476.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 572

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D V PNE           AK+DPEMAFD+VKQMK  GI P+LRSYGPALFGFC+K  A 
Sbjct: 169 VDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDAG 228

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVDAHMVE+ V+ EEPEL
Sbjct: 229 KAYEVDAHMVESEVVPEEPEL 249


>gb|AAM13880.1| unknown protein [Arabidopsis thaliana]
          Length = 572

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/82 (64%), Positives = 61/82 (74%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D V PNE           AK+DPEMAFD+VKQMK  GI P+LRSYGPALFGFC+K  A 
Sbjct: 169 VDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDAD 228

Query: 70  KAYEVDAHMVENSVLAEEPELL 5
           KAYEVDAHMVE+ V+ EEPEL+
Sbjct: 229 KAYEVDAHMVESEVVPEEPELV 250


>pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
           A. Thaliana With Mn gi|406855805|pdb|4G26|A Chain A,
           Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1)
           From A. Thaliana With Ca
          Length = 501

 Score =  105 bits (262), Expect = 6e-21
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D V PNE           AK+DPEMAFD+VKQMK  GI P+LRSYGPALFGFC+K  A 
Sbjct: 98  VDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDAD 157

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVDAHMVE+ V+ EEPEL
Sbjct: 158 KAYEVDAHMVESEVVPEEPEL 178


>ref|NP_850186.1| proteinaceous RNase P 1 [Arabidopsis thaliana]
           gi|75115346|sp|Q66GI4.1|PRRP1_ARATH RecName:
           Full=Proteinaceous RNase P 1,
           chloroplastic/mitochondrial; AltName:
           Full=Pentatricopeptide repeat-containing protein
           At2g32230; Flags: Precursor gi|51536606|gb|AAU05541.1|
           At2g32230 [Arabidopsis thaliana]
           gi|330253558|gb|AEC08652.1| proteinaceous RNase P 1
           [Arabidopsis thaliana]
          Length = 572

 Score =  105 bits (262), Expect = 6e-21
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D V PNE           AK+DPEMAFD+VKQMK  GI P+LRSYGPALFGFC+K  A 
Sbjct: 169 VDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDAD 228

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVDAHMVE+ V+ EEPEL
Sbjct: 229 KAYEVDAHMVESEVVPEEPEL 249


>gb|AAD15382.1| hypothetical protein [Arabidopsis thaliana]
          Length = 416

 Score =  105 bits (262), Expect = 6e-21
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D V PNE           AK+DPEMAFD+VKQMK  GI P+LRSYGPALFGFC+K  A 
Sbjct: 139 VDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDAD 198

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVDAHMVE+ V+ EEPEL
Sbjct: 199 KAYEVDAHMVESEVVPEEPEL 219


>ref|XP_004486770.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like isoform X1 [Cicer
           arietinum]
          Length = 578

 Score =  105 bits (261), Expect = 8e-21
 Identities = 52/81 (64%), Positives = 61/81 (75%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D V PNE           AKEDPEMAF L+KQMK +GI PKLRSYGPAL+GFCK+  AA
Sbjct: 161 IDQVQPNEATFTNAARLAAAKEDPEMAFQLLKQMKCAGIAPKLRSYGPALYGFCKRGDAA 220

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVDA M+E+ ++AEEPEL
Sbjct: 221 KAYEVDADMIESGLMAEEPEL 241


>ref|XP_006294023.1| hypothetical protein CARUB_v10023016mg [Capsella rubella]
           gi|482562731|gb|EOA26921.1| hypothetical protein
           CARUB_v10023016mg [Capsella rubella]
          Length = 517

 Score =  105 bits (261), Expect = 8e-21
 Identities = 52/81 (64%), Positives = 60/81 (74%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D V PNE           AK+DPEMAFD+VKQMK  GI P+LRSYGPALFGFC+K  A 
Sbjct: 169 VDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDAD 228

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVDAHM+E+ V+ EEPEL
Sbjct: 229 KAYEVDAHMIESDVVPEEPEL 249


>gb|EMJ26904.1| hypothetical protein PRUPE_ppa003560mg [Prunus persica]
          Length = 565

 Score =  104 bits (259), Expect = 1e-20
 Identities = 54/80 (67%), Positives = 58/80 (72%)
 Frame = -2

Query: 247 DNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAAK 68
           D V PNE           A EDPEMAF LVKQMK  GI PKLRSYGPALFGFCKK  A +
Sbjct: 162 DKVVPNEATFTSAARLAAAAEDPEMAFHLVKQMKGLGIPPKLRSYGPALFGFCKKGEADR 221

Query: 67  AYEVDAHMVENSVLAEEPEL 8
           AYEVDAHMVE+ V+AEEPE+
Sbjct: 222 AYEVDAHMVESKVIAEEPEI 241


>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 895

 Score =  104 bits (259), Expect = 1e-20
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D + PNE           A EDPEMAF+LVKQMK+ GI PKLRSYGP LFGFCKK  A 
Sbjct: 485 VDGIEPNEATFTSAARLACAMEDPEMAFNLVKQMKSCGIPPKLRSYGPPLFGFCKKGDAN 544

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           +AYEVDAHMVE+ V+AEEPEL
Sbjct: 545 RAYEVDAHMVESGVVAEEPEL 565


>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score =  104 bits (259), Expect = 1e-20
 Identities = 52/81 (64%), Positives = 58/81 (71%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D V PNE           A EDPEMAFDL+KQMK   I+PKLRSYGPALFGFCKK MA 
Sbjct: 184 IDKVPPNEATFTNAARLAIAMEDPEMAFDLIKQMKCFDILPKLRSYGPALFGFCKKGMAD 243

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           +AY VDAHM E+ V+ EEPEL
Sbjct: 244 RAYAVDAHMAESGVMPEEPEL 264


>ref|XP_006410352.1| hypothetical protein EUTSA_v10016443mg [Eutrema salsugineum]
           gi|557111521|gb|ESQ51805.1| hypothetical protein
           EUTSA_v10016443mg [Eutrema salsugineum]
          Length = 572

 Score =  103 bits (258), Expect = 2e-20
 Identities = 52/81 (64%), Positives = 60/81 (74%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           ++ V PNE           AK+DPEMAFD+VKQMK  GI PKLRSYGPALFGFC+K  A 
Sbjct: 169 VEKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPKLRSYGPALFGFCRKGDAD 228

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVDAHM+E+ V+ EEPEL
Sbjct: 229 KAYEVDAHMLESEVVPEEPEL 249


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  103 bits (256), Expect = 3e-20
 Identities = 52/81 (64%), Positives = 60/81 (74%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           +D + PNE           A EDPEMAF+LVKQMK+ GI PKLRSYGP LFGFCKK  A 
Sbjct: 116 VDGIEPNEATFTSAARLACAMEDPEMAFNLVKQMKSCGIPPKLRSYGPPLFGFCKKGDAD 175

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           +AYEVDAHM+E+ V+AEEPEL
Sbjct: 176 RAYEVDAHMMESGVVAEEPEL 196


>ref|XP_006353636.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like isoform X1 [Solanum
           tuberosum] gi|565374171|ref|XP_006353637.1| PREDICTED:
           proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like isoform X2 [Solanum
           tuberosum]
          Length = 574

 Score =  102 bits (255), Expect = 4e-20
 Identities = 52/81 (64%), Positives = 61/81 (75%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           ++ VAPNE           AK+DPEMAFDLVK+MK+ G+ PKLRSYGPALFGFC+K MA 
Sbjct: 159 VNGVAPNEATFTSAARLAVAKQDPEMAFDLVKKMKSFGVPPKLRSYGPALFGFCEKGMAD 218

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVD HM E+ V+AEE EL
Sbjct: 219 KAYEVDVHMGESGVVAEEAEL 239


>ref|XP_004241814.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 567

 Score =  102 bits (255), Expect = 4e-20
 Identities = 52/81 (64%), Positives = 61/81 (75%)
 Frame = -2

Query: 250 LDNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAA 71
           ++ VAPNE           AK+DPEMAFDLVK+MK+ G+ PKLRSYGPALFGFC+K MA 
Sbjct: 159 VNGVAPNEATFTSAARLAVAKQDPEMAFDLVKKMKSFGVPPKLRSYGPALFGFCEKGMAD 218

Query: 70  KAYEVDAHMVENSVLAEEPEL 8
           KAYEVD HM E+ V+AEE EL
Sbjct: 219 KAYEVDVHMGESGVVAEEAEL 239


>ref|XP_006484639.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 593

 Score =  102 bits (254), Expect = 5e-20
 Identities = 54/80 (67%), Positives = 57/80 (71%)
 Frame = -2

Query: 247 DNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAAK 68
           D V PNE           AKEDPEMAFDLVKQMK+ GI PKLRSYGPALFGFCK     K
Sbjct: 184 DKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTDK 243

Query: 67  AYEVDAHMVENSVLAEEPEL 8
           AYEVDAHM E+ V+ EEPEL
Sbjct: 244 AYEVDAHMGESGVVPEEPEL 263


>ref|XP_006437491.1| hypothetical protein CICLE_v10031025mg [Citrus clementina]
           gi|557539687|gb|ESR50731.1| hypothetical protein
           CICLE_v10031025mg [Citrus clementina]
          Length = 593

 Score =  102 bits (254), Expect = 5e-20
 Identities = 54/80 (67%), Positives = 57/80 (71%)
 Frame = -2

Query: 247 DNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAAK 68
           D V PNE           AKEDPEMAFDLVKQMK+ GI PKLRSYGPALFGFCK     K
Sbjct: 184 DKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTDK 243

Query: 67  AYEVDAHMVENSVLAEEPEL 8
           AYEVDAHM E+ V+ EEPEL
Sbjct: 244 AYEVDAHMGESGVVPEEPEL 263


>ref|XP_006437490.1| hypothetical protein CICLE_v10031025mg [Citrus clementina]
           gi|557539686|gb|ESR50730.1| hypothetical protein
           CICLE_v10031025mg [Citrus clementina]
          Length = 584

 Score =  102 bits (254), Expect = 5e-20
 Identities = 54/80 (67%), Positives = 57/80 (71%)
 Frame = -2

Query: 247 DNVAPNEXXXXXXXXXXXAKEDPEMAFDLVKQMKTSGIIPKLRSYGPALFGFCKKVMAAK 68
           D V PNE           AKEDPEMAFDLVKQMK+ GI PKLRSYGPALFGFCK     K
Sbjct: 184 DKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTDK 243

Query: 67  AYEVDAHMVENSVLAEEPEL 8
           AYEVDAHM E+ V+ EEPEL
Sbjct: 244 AYEVDAHMGESGVVPEEPEL 263