BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00003183
         (1316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661...    99   2e-19
ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624...    92   2e-17
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]    79   2e-12
emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]    66   4e-12
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    65   9e-11
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    71   4e-10
gb|AAT40486.1| putative polyprotein [Solanum demissum]                 55   5e-09
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]    64   4e-08
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]    64   4e-08
ref|XP_004289223.1| PREDICTED: uncharacterized protein LOC101293...    48   1e-07
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    54   2e-07
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...    58   3e-07
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t...    63   3e-07
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    57   4e-07
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    59   1e-06
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    61   1e-06
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    61   1e-06
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    60   2e-06
ref|XP_004243119.1| PREDICTED: uncharacterized protein LOC101247...    59   3e-06
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    55   4e-06

>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
          Length = 516

 Score = 99.4 bits (246), Expect(2) = 2e-19
 Identities = 78/255 (30%), Positives = 131/255 (51%), Gaps = 14/255 (5%)
 Frame = +1

Query: 379  PDILISLVQLKDGNFDQLDRHD*VRARVQE*ARFHW*NHNAALPE*F--KFKRRKKINTL 552
            P  +I+ VQLK  N+D+  R   VR  ++   +F + + +   P+    +      +N++
Sbjct: 39   PGNIITQVQLKGENYDEWARA--VRGSLRARRKFRFVDGSIKKPDDAAPEIDDWWTVNSM 96

Query: 553  IRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL*IANKRYICGD 732
            I SWIF      LR++IT    A+ + +++ QRF   N P I   K +L  AN +     
Sbjct: 97   IVSWIFNTIEPKLRSTITYRENAQELWDDIKQRFSISNGPRIQQLKSEL--ANCKQNGDS 154

Query: 733  ILC---QIKETVGRTCNHEQLPICDCE--KTATESA--KRHEKEKLWQFLF*LDTTNIRK 891
            I+    ++K+      + +Q+P+C C   K    +A  K+ E+EKL QFL  LD T  R 
Sbjct: 155  IVTYFGRLKKLWDELNDFDQIPMCTCNGCKCGISAALNKKREEEKLHQFLMGLDDTQFRT 214

Query: 892  IRSLILDEDTLSNVNQAYAKIIQQEQVQNMTKEDDENSIGGVVFAVRNFHGNNTNK---- 1059
            +RS +L  D L N+N+AY  ++Q+E+V  MT+  +E     + FAV++   ++  K    
Sbjct: 215  VRSNVLSLDPLPNLNRAYQMVVQEERVGVMTRGKEERG-DPIAFAVKSGRTSSWEKKPNT 273

Query: 1060 -CNLVCGHCNKNGHE 1101
                 C HC ++GH+
Sbjct: 274  GSEKPCSHCKRDGHD 288



 Score = 24.6 bits (52), Expect(2) = 2e-19
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 1113 LVGYPKWWLER 1145
            LVGYP WW +R
Sbjct: 295  LVGYPDWWGDR 305


>ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624694 isoform X1 [Citrus
            sinensis] gi|568852764|ref|XP_006480041.1| PREDICTED:
            uncharacterized protein LOC102624694 isoform X2 [Citrus
            sinensis] gi|568852766|ref|XP_006480042.1| PREDICTED:
            uncharacterized protein LOC102624694 isoform X3 [Citrus
            sinensis]
          Length = 320

 Score = 92.0 bits (227), Expect(2) = 2e-17
 Identities = 66/197 (33%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
 Frame = +1

Query: 541  INTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL*IANKRY 720
            +N++I SWI       LR++IT   VAK + +++ +RF   N P +   K +L    +R 
Sbjct: 16   VNSMIVSWILNTIEPTLRSTITHMEVAKKLWDDIKERFSVGNGPRVHQLKSELAECKQRG 75

Query: 721  ICGDILC---QIKETVGRTCNHEQLPICDCEKTATESA----KRHEKEKLWQFLF*LDTT 879
            +   IL    ++K       N+EQ PIC C     E      K+ E+E+L QFL  LD T
Sbjct: 76   MT--ILSYYGKLKLIWEELANYEQYPICSCGGCTCELEAKLNKKCEEERLHQFLMGLDDT 133

Query: 880  NIRKIRSLILDEDTLSNVNQAYAKIIQQEQVQNMTKEDDENSIGGVVFAVRNFHGNN--- 1050
                +RS IL  D L  +N+AY+ ++Q+E+VQ +T+   E     V FAV+         
Sbjct: 134  IYGSVRSNILSTDPLPPLNRAYSLVVQEERVQTITR-GKEGRGEPVAFAVQGGVKGQIEI 192

Query: 1051 TNKCNLVCGHCNKNGHE 1101
              K +++C HC K GH+
Sbjct: 193  REKSSVICKHCRKTGHD 209



 Score = 25.0 bits (53), Expect(2) = 2e-17
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 1113 LVGYPKWWLER 1145
            L+GYP+WW +R
Sbjct: 216  LIGYPEWWGDR 226


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 79.0 bits (193), Expect(2) = 2e-12
 Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 10/178 (5%)
 Frame = +1

Query: 598  SITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL*IANKRYICGDILC--QIKETVGRTC 771
            +I    V+  +  E+ Q+F   N P +   K  L +  K+   G I+   ++K       
Sbjct: 53   TINSMLVSWELWEEIKQQFSIGNGPRVQQLKSYL-VNCKQEGQGIIVYYGKLKSLWDELN 111

Query: 772  NHEQLPICDCE----KTATESAKRHEKEKLWQFLF*LDTTNIRKIRSLILDEDTLSNVNQ 939
            N++ +P+C C     K  T+  K+ E+E++ QFL  LD      +RS IL  + LSN+N+
Sbjct: 112  NYDSIPVCTCTRCKCKITTQLEKKREEERVHQFLMGLDEDGYGTVRSNILSIEPLSNLNR 171

Query: 940  AYAKIIQQEQVQNMTKEDDENSIGGVVFAV----RNFHGNNTNKCNLVCGHCNKNGHE 1101
             YA I+QQE+V+ MT+  +E     + FAV    RN  G+  +K  ++C +C + GHE
Sbjct: 172  VYAMIVQQERVRTMTRTKEERG-SPMSFAVQVGGRNPGGDGKDK-TVICSNCKRKGHE 227



 Score = 21.2 bits (43), Expect(2) = 2e-12
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +3

Query: 1116 VGYPKWWLER 1145
            + YP+WW +R
Sbjct: 235  IAYPEWWGDR 244


>emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]
          Length = 685

 Score = 65.9 bits (159), Expect(3) = 4e-12
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
 Frame = +1

Query: 775  HEQLPICDCEKTATESA---KRHEKEKLWQFLF*LDTTNIRKIRSLILDEDTLSNVNQAY 945
            HE L  C C  + T ++    R E+EKL  FL  L+T    ++R+ IL +D L ++++AY
Sbjct: 130  HEPLISCTCCSSCTAASLHQARCEQEKLHDFLMGLNTDLYAQLRTNILSQDPLPSLDRAY 189

Query: 946  AKIIQQEQV---QNMTKEDDENSIGGVVFAVRNFHGNNTNKCNL-VCGHCNKNGHET 1104
              +IQ E+V   + +TK+     +G   FAVR   G    K    VC HC K GHET
Sbjct: 190  QLVIQDERVRLAKAVTKDKPAEVLG---FAVRTGAGRGRGKTERPVCSHCKKTGHET 243



 Score = 31.6 bits (70), Expect(3) = 4e-12
 Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 4/117 (3%)
 Frame = +2

Query: 428 NWTDTIKLGLESKNKLGFIGRTITQPY----QNDSNLRGGRKSTP*LGHGYLNTIESS*E 595
           +W   I+L LE++ K  F+  TIT P     Q+D N          L     NTI+    
Sbjct: 45  DWASDIQLALEARRKFEFLEGTITGPQPPYTQSDWNTVNAM-----LVSWITNTIDP--- 96

Query: 596 LQLQRQGLQKRSEMSCCKGSVHRTGLIF*IESSNYELQIKGTSVVTYFAKLRKLWEE 766
                   + ++ ++ C+                   Q K  SV TY+ KL  LWEE
Sbjct: 97  --------ELKTSIAKCE-------------------QSKSMSVTTYYGKLNVLWEE 126



 Score = 21.2 bits (43), Expect(3) = 4e-12
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 1113 LVGYPKWWLER 1145
            +VGYP+ WL++
Sbjct: 268  IVGYPEGWLDQ 278


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 65.5 bits (158), Expect(3) = 9e-11
 Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
 Frame = +1

Query: 772  NHEQLPICDCEKTATESA----KRHEKEKLWQFLF*LDTTNIRKIRSLILDEDTLSNVNQ 939
            N++++P+C+C            K+ E+E++ QFL  LD      + S IL  + L N+N+
Sbjct: 124  NYDKMPVCNCVGCKCNLTIVLEKKREEERVHQFLMGLDEEGYGTVSSNILSTEPLPNLNR 183

Query: 940  AYAKIIQQEQVQNMTKEDDENSIGGVVFAVRNFHGNNT----NKCNLVCGHCNKNGHE 1101
             YA ++QQE+++ MT+  +E   G ++       G N+       N+VC +C + GH+
Sbjct: 184  VYAMVVQQERMRTMTRTKEER--GNLMSFAMKVGGQNSRGEXKDRNVVCTNCKREGHD 239



 Score = 28.1 bits (61), Expect(3) = 9e-11
 Identities = 30/146 (20%), Positives = 54/146 (36%)
 Frame = +2

Query: 350 DEYYMAPNDVQIS*LVSFN*RTAILTNWTDTIKLGLESKNKLGFIGRTITQPYQNDSNLR 529
           + Y +  ND   + +     R      W   +   L +K K GF    I QP +N   + 
Sbjct: 13  NHYSLNSNDNSGNIITQVQLRGENYDEWARAMWTALRAKKKYGFXDGXIKQPVENAQEIE 72

Query: 530 GGRKSTP*LGHGYLNTIESS*ELQLQRQGLQKRSEMSCCKGSVHRTGLIF*IESSNYELQ 709
                        +N++E    +    +  Q R +++ CK +                  
Sbjct: 73  NWWT---------INSMERF-SIGNGPRVQQLRLDLANCKQN------------------ 104

Query: 710 IKGTSVVTYFAKLRKLWEEPATMNNF 787
             G  +VTY+ KL+ +W+E   +NN+
Sbjct: 105 --GQVIVTYYGKLKMIWDE---LNNY 125



 Score = 20.4 bits (41), Expect(3) = 9e-11
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 1113 LVGYPKWWLER 1145
            L+GY +WW  R
Sbjct: 246  LIGYLEWWGNR 256


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 71.2 bits (173), Expect(2) = 4e-10
 Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
 Frame = +1

Query: 541  INTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL*IA--NK 714
            +N ++ SWI       ++++++K R AK +   L QR+   N P I   K  +     +K
Sbjct: 83   VNAMLVSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKCEQSK 142

Query: 715  RYICGDILCQIKETVGRTCNHEQLPICDCEKTATESA---KRHEKEKLWQFLF*LDTTNI 885
                     ++         HE L  C C  + T ++    R E+ KL  FL  L+T   
Sbjct: 143  SMSVTTYYGKLNVLWEELFKHEPLISCTCCSSCTAASLHQARREQGKLHDFLMGLNTDLY 202

Query: 886  RKIRSLILDEDTLSNVNQAYAKIIQQEQVQNMTKEDDENSIGGVVFAVRNFHGNNTNKCN 1065
             ++R+ IL +D L ++++AY  +IQ ++V+      ++     + FAVR   G    K  
Sbjct: 203  AQLRTNILSQDPLPSLDRAYQLVIQDKRVRLAKAVTEDKPAEVLGFAVRTGAGRGRGKTE 262

Query: 1066 L-VCGHCNKNGHET 1104
              VC HC K GHET
Sbjct: 263  RPVCSHCKKTGHET 276



 Score = 21.2 bits (43), Expect(2) = 4e-10
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 1113 LVGYPKWWLER 1145
            +VGYP+ WL++
Sbjct: 301  IVGYPEGWLDQ 311


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 55.1 bits (131), Expect(3) = 5e-09
 Identities = 50/199 (25%), Positives = 79/199 (39%), Gaps = 8/199 (4%)
 Frame = +1

Query: 541  INTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL*IANKRY 720
            +N+++  W+F      LR++I+     K +  +L +RF   +  ++L             
Sbjct: 70   VNSMLIVWVFNTIDPSLRSTISYMETVKELWEDLRERFSVASGRNLL------------- 116

Query: 721  ICGDILCQIKETVGRTCNHEQLPICDCEKTATESAKRHEKEKLWQFLF*LDTTNIRKIRS 900
                        VG TC  E+           +  +  EKEK+ QF   LD        S
Sbjct: 117  ---------AIHVGCTCGAEK-----------KLTQEREKEKVHQFSMGLDDKVFGTTHS 156

Query: 901  LILDEDTLSNVNQAYAKIIQQEQVQNMTKEDDENSIGGVVFAVRNFHGNNTNKCNL---- 1068
             IL    L  +N+ YA IIQ+E+ QN+ +  ++ S   V FAV +      N   +    
Sbjct: 157  NILSTKPLPTLNRVYAMIIQEERHQNLARAKEDRS-DVVAFAVHSLSTARNNYSTIPSND 215

Query: 1069 ----VCGHCNKNGHETKNY 1113
                 C  C K  +ETK Y
Sbjct: 216  LDKPPCAKCGKFNYETKKY 234



 Score = 27.3 bits (59), Expect(3) = 5e-09
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 431 WTDTIKLGLESKNKLGFIGRTITQPYQNDSNL 526
           W   ++    +K KLGFI   ITQP +    L
Sbjct: 33  WAKAMRNAFRAKKKLGFIDGLITQPKEEGFEL 64



 Score = 25.4 bits (54), Expect(3) = 5e-09
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 1110 LLVGYPKWW 1136
            LL+GYP+WW
Sbjct: 236  LLIGYPEWW 244


>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
          Length = 1262

 Score = 64.3 bits (155), Expect(2) = 4e-08
 Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 6/194 (3%)
 Frame = +1

Query: 541  INTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL*IAN--K 714
            +N ++ SWI       ++++++K R AK +   L QR+   N P I   K  +      K
Sbjct: 82   VNAMLGSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKCEQPK 141

Query: 715  RYICGDILCQIKETVGRTCNHEQLPICDCEKTATESA---KRHEKEKLWQFLF*LDTTNI 885
                     ++         +E L  C C  + T ++    R E+ KL  FL  L+T   
Sbjct: 142  SMSVTTYYGKLNVLWEELFKNEPLISCTCCSSCTAASLHQARREQGKLHDFLMGLNTDLY 201

Query: 886  RKIRSLILDEDTLSNVNQAYAKIIQQEQVQNMTKEDDENSIGGVVFAVRNFHGNNTNKCN 1065
             ++R+ IL +D L ++++AY  +IQ E+V+      ++     + F VR   G    K  
Sbjct: 202  AQLRTNILSQDPLPSLDRAYQLVIQDERVRLAKAVTEDKPAEVLGFXVRTGAGRGRGKTE 261

Query: 1066 L-VCGHCNKNGHET 1104
              VC H  K GHET
Sbjct: 262  RPVCSHXKKTGHET 275



 Score = 21.2 bits (43), Expect(2) = 4e-08
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 1113 LVGYPKWWLER 1145
            +VGYP+ WL++
Sbjct: 300  IVGYPEGWLDQ 310


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score = 64.3 bits (155), Expect(2) = 4e-08
 Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
 Frame = +1

Query: 550  LIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL*IA--NKRYI 723
            ++ SWI       ++++++K R AK +   L QR+   N P I   K  +     +K   
Sbjct: 1    MLVSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKCEQSKSMS 60

Query: 724  CGDILCQIKETVGRTCNHEQLPICDCEKTATESA---KRHEKEKLWQFLF*LDTTNIRKI 894
                  ++         HE L  C C  + T ++    R E+ KL  FL  L+T    ++
Sbjct: 61   VTTYYGKLNVLWEELFKHEPLISCTCCSSCTAASLHQARREQGKLHDFLMGLNTDLYAQL 120

Query: 895  RSLILDEDTLSNVNQAYAKIIQQEQVQNMTKEDDENSIGGVVFAVRNFHGNNTNKC-NLV 1071
             + IL +D L ++++AY  +IQ E+V+      ++     + FAVR   G    K   LV
Sbjct: 121  XTNILSQDPLPSLDRAYQLVIQDERVRLAKAVTEDKPAEVLGFAVRTGVGXGRGKTERLV 180

Query: 1072 CGHCNKNGHET 1104
            C H  K GHET
Sbjct: 181  CXHXKKTGHET 191



 Score = 21.2 bits (43), Expect(2) = 4e-08
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 1113 LVGYPKWWLER 1145
            +VGYP+ WL++
Sbjct: 216  IVGYPEGWLDQ 226


>ref|XP_004289223.1| PREDICTED: uncharacterized protein LOC101293529 [Fragaria vesca
            subsp. vesca]
          Length = 536

 Score = 47.8 bits (112), Expect(2) = 1e-07
 Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 5/196 (2%)
 Frame = +1

Query: 538  KINTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL*IANK- 714
            + N L+++W+F      ++ S+   + A  I  EL +RF   N   + N +  +   NK 
Sbjct: 94   RCNILVKTWLFGSMSKEIKRSLAHCKTAHDIWEELKERFSHTNTVQLYNIENDI---NKC 150

Query: 715  RYICGDILCQIKETVGRTCNHE---QLPICDCEKTATESAKRH-EKEKLWQFLF*LDTTN 882
                G +        G     +    L  C CE  A  + K + E +K  +FL  L+   
Sbjct: 151  EQGTGTVTTYHTNLTGLWDARDVACALTPCTCE--AANTYKTYIETQKTIKFLMGLN-EG 207

Query: 883  IRKIRSLILDEDTLSNVNQAYAKIIQQEQVQNMTKEDDENSIGGVVFAVRNFHGNNTNKC 1062
               +RS I+  D L ++N+ YA  ++ E+   ++ E    +     FAV+ F    T K 
Sbjct: 208  YASLRSNIISMDPLPSLNKVYAAALRHEKQAAVSNEKVVTTTEASTFAVKRFAKPPTEK- 266

Query: 1063 NLVCGHCNKNGHETKN 1110
             L C  C    H  +N
Sbjct: 267  ELKCEKCGMTNHVMRN 282



 Score = 36.2 bits (82), Expect(2) = 1e-07
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2

Query: 428 NWTDTIKLGLESKNKLGFIGRTITQPYQN 514
           NW D++ + L  KNK GFI  TIT+P  N
Sbjct: 57  NWADSMSMALAVKNKHGFINGTITRPLHN 85


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 53.9 bits (128), Expect(2) = 2e-07
 Identities = 30/98 (30%), Positives = 53/98 (54%)
 Frame = +1

Query: 805  KTATESAKRHEKEKLWQFLF*LDTTNIRKIRSLILDEDTLSNVNQAYAKIIQQEQVQNMT 984
            KT  +  K  E++KL QFL  LD +    ++S +L    L ++ +AY  + Q E+ ++++
Sbjct: 170  KTMDDVRKEREEDKLHQFLMGLDESVYGAVKSALLSRVPLPSLEEAYNALTQDEESKSLS 229

Query: 985  KEDDENSIGGVVFAVRNFHGNNTNKCNLVCGHCNKNGH 1098
            +  +E  + GV FAV+       +  N VC +C + GH
Sbjct: 230  RLHNER-VDGVSFAVQTTSRPRDSSENRVCSNCGRVGH 266



 Score = 29.3 bits (64), Expect(2) = 2e-07
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 8/122 (6%)
 Frame = +2

Query: 431 WTDTIKLGLESKNKLGFIGRTITQPYQNDSNLRGGRKSTP*LGHGYLNTIESS*ELQLQR 610
           W   ++L L+++ K GF   +I QP + D +      +   +      TI+ +    +  
Sbjct: 50  WATNLRLALKARKKFGFADGSIPQPVETDPDFEDWTANNALVVSWMKLTIDETVSTSMSH 109

Query: 611 QG--------LQKRSEMSCCKGSVHRTGLIF*IESSNYELQIKGTSVVTYFAKLRKLWEE 766
                     +QKR         V     +  +++     + KG ++ TY+ +L +LW  
Sbjct: 110 LDDSHELWTHIQKRF-------GVKNGQRVQRLKTELATCRQKGVAIETYYGRLSQLWRS 162

Query: 767 PA 772
            A
Sbjct: 163 LA 164


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score = 57.8 bits (138), Expect(2) = 3e-07
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
 Frame = +1

Query: 535  KKINTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQN-------RPDILN*KQ 693
            K  N++I  WI       +R+++     AK + + L QRF   N       + +IL  KQ
Sbjct: 73   KAANSMIIGWIRTSIDPTIRSTVAFVSDAKDLWDSLKQRFSNGNGVRKQLLKDEILACKQ 132

Query: 694  QL*IANKRYICGDILCQIKETVGRTCNHEQLPICDCEKTATESAKRHEKEKLWQFLF*LD 873
                     +    L ++ E +    N++    C CE  A + AK  E +K+ QFL  LD
Sbjct: 133  D---GQSVLVYYGRLTKLWEELQ---NYKTSRTCTCE-AAPDIAKEREDDKVHQFLLNLD 185

Query: 874  TTNIRKIRSLILDEDTLSNVNQAYAKIIQQEQVQNMTKEDDENSIGGVVFAVRNFHGNNT 1053
                R IRS I  +D L  +NQ Y+++I +EQ  N ++  D+     V F V+      T
Sbjct: 186  E-RFRPIRSTITVQDPLPALNQVYSRVIHEEQNLNASRIKDDIKTEAVGFTVQATPLPPT 244

Query: 1054 ------------NKCNLVCGHCNKNGHE 1101
                        ++ +L C H ++ GH+
Sbjct: 245  PQVAAVSAPRFRDRSSLTCTHYHRQGHD 272



 Score = 25.0 bits (53), Expect(2) = 3e-07
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 1110 LLVGYPKWWLER 1145
            L+ GYP WWLE+
Sbjct: 278  LVHGYPDWWLEQ 289


>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 370

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 27/236 (11%)
 Frame = +1

Query: 523  FKRRKKINTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL* 702
            F+  K +N++I  WI       +++++T    A  + +EL QRF   N   +   K QL 
Sbjct: 86   FENWKTVNSMIVGWIRVSIEPKVKSTVTFISDAHLLWDELRQRFSVTNNVRVHQIKAQL- 144

Query: 703  IANKRYICGDILCQIKETVGRTCN-------HEQLPICDCEKTATESAKRHEKEKLWQFL 861
                   C      + +  GR CN       ++   +C      T   K  + EKL QF+
Sbjct: 145  -----ASCRQEGQTVIDYYGRLCNLWDELKNYQASAVCPHGSVLTAIVKERDDEKLHQFV 199

Query: 862  F*LDTTNIRKIRSLILDEDTLSNVNQAYAKIIQQEQ--VQNMTKEDDENSIGGVVF---- 1023
              LD+     + + +++ D L ++  AY+++I++EQ    + T+E  +  +G V      
Sbjct: 200  LGLDSARFSGLCTNLINMDPLPSLGVAYSQVIREEQRIHASRTQEQRQEVVGFVARHEQS 259

Query: 1024 ------AVRNFHGNNTNKCNLVCGHCNKNGHETKNYLS--------ATQNGGLRGT 1149
                  A  +   +      ++C HC + GHE K+  S          +NG  RG+
Sbjct: 260  SAMSSPAQSSIESSIVKSRPVLCSHCGRTGHEKKDCWSIVGFPDWWTERNGNGRGS 315


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 57.0 bits (136), Expect(2) = 4e-07
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = +1

Query: 793  CDCEKTATESAKRHEKEKLWQFLF*LDTTNIRKIRSLILDEDTLSNVNQAYAKIIQQEQV 972
            C CE  A++  K  E +++ +FL  LD+     IRS I D + L ++ Q Y++++++EQ 
Sbjct: 168  CKCE-AASDIEKEREDDRVHKFLLGLDS-RFSSIRSSITDIEPLPDLYQVYSRVVREEQN 225

Query: 973  QNMTKEDDENSIGGVVFAVRNFHGNN-TNKCNLVCGHCNKNGHE 1101
             N ++  D      + F+V++       +K  L C HCN+ GHE
Sbjct: 226  LNASRTKDVVKTEAIGFSVQSSTTPRFRDKSTLFCTHCNRKGHE 269



 Score = 25.0 bits (53), Expect(2) = 4e-07
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 1110 LLVGYPKWWLER 1145
            L+ GYP WWLE+
Sbjct: 275  LVHGYPDWWLEQ 286


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 59.3 bits (142), Expect(2) = 1e-06
 Identities = 48/147 (32%), Positives = 65/147 (44%)
 Frame = +1

Query: 661  QNRPDILN*KQQL*IANKRYICGDILCQIKETVGRTCNHEQLPICDCEKTATESAKRHEK 840
            Q R +I+N KQ+       Y       +IK        + ++P C C   A    K  E 
Sbjct: 19   QLRSEIVNLKQEGMTVAAYY------AKIKGMWDELNQYIEIPECTCG-AAQAIVKSRED 71

Query: 841  EKLWQFLF*LDTTNIRKIRSLILDEDTLSNVNQAYAKIIQQEQVQNMTKEDDENSIGGVV 1020
            EK  QFL  LD T    +RS IL  D L  + + YA + Q+E+ ++M +  D   I  V 
Sbjct: 72   EKAHQFLMGLDDTTFGTVRSSILALDPLPTLGKIYAMVTQEERHRSMARGADRAEI-TVF 130

Query: 1021 FAVRNFHGNNTNKCNLVCGHCNKNGHE 1101
             A     G  TNK    C HC K GH+
Sbjct: 131  AAXTEKPGGQTNKSG-SCTHCGKTGHD 156



 Score = 21.6 bits (44), Expect(2) = 1e-06
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 1113 LVGYPKWWLER 1145
            L GYP WW  R
Sbjct: 163  LKGYPDWWPTR 173


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 29/238 (12%)
 Frame = +1

Query: 523  FKRRKKINTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL* 702
            ++  + +N++I  WI       +++++T    A  + +EL QRF   N+  +   K QL 
Sbjct: 83   YENWQAVNSMIVGWIRASIEPKVKSTVTFISDAHQLWSELKQRFSVGNKVRVHQIKAQL- 141

Query: 703  IANKRYICGDILCQIKETVGRTCN-------HEQLPICDCEK----TATESAKRHEKEKL 849
                   C      + +  GR C        ++ + +C C         E +K  E+EK+
Sbjct: 142  -----AACRQDGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKEREEEKI 196

Query: 850  WQFLF*LDTTNIRKIRSLILDEDTLSNVNQAYAKIIQQEQ--VQNMTKEDDENSIGGVVF 1023
             QF+  LD +    + + ++  D   ++ + Y++++++EQ       +E  +++IG +  
Sbjct: 197  HQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQSAIGFLTR 256

Query: 1024 AVRNFHGNNTNKC-------NLVCGHCNKNGHETK---------NYLSATQNGGLRGT 1149
                     T+         +++C HC ++GHE K         ++ +   NGG RG+
Sbjct: 257  QSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGS 314


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
 Frame = +1

Query: 511  E*FKFKRRKKINTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*K 690
            E F F++  + N++I SW+       +   I   + A+ +  +L  +F  +N P +   +
Sbjct: 357  EPFMFEQWNQCNSMILSWLTHAVESDIAEGIIHAKTAREVWVDLRDQFSQKNAPAVFQIQ 416

Query: 691  QQL*IANKRYIC-GDILCQIKETVGRTCNHEQLPICDCEKTATESAKRHEKEKLWQFLF* 867
            + +   ++  +       +IK        +     C+  +   E   + E+++L QFL  
Sbjct: 417  KSIATMSQGTMTVAAYFTKIKALWDELETYRSPLTCNQRQAHLE---QREEDRLMQFLMG 473

Query: 868  LDTTNIRKIRSLILDEDTLSNVNQAYAKIIQQEQVQNMTKEDDENSIGGVVFAVRNFHGN 1047
            L+ +  + +RS IL    L NV QAY+ I+Q+E  + ++ E  EN    +  AV    GN
Sbjct: 474  LNES-YKAVRSNILMMSPLPNVRQAYSLIVQEEMQRQVSSEPTENF--SIAAAVPGKGGN 530

Query: 1048 NTNKCNLVCGHCNKNGH 1098
               K   +C HCN++GH
Sbjct: 531  PRQK---MCDHCNRSGH 544


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 29/238 (12%)
 Frame = +1

Query: 523  FKRRKKINTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL* 702
            ++  + +N++I  WI       +++++T    A  + +EL QRF   N+  +   K QL 
Sbjct: 83   YENWQAVNSMIVGWIRASIEPKVKSTVTFICDAHQLWSELKQRFSVGNKVHVHQIKTQL- 141

Query: 703  IANKRYICGDILCQIKETVGRTCN-------HEQLPICDCEK----TATESAKRHEKEKL 849
                   C      + +  GR C        ++ + +C C         E +K  E+EK+
Sbjct: 142  -----AACRQDGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKEREEEKI 196

Query: 850  WQFLF*LDTTNIRKIRSLILDEDTLSNVNQAYAKIIQQEQ--VQNMTKEDDENSIGGVVF 1023
             QF+  LD +    + + ++  D   ++ + Y++++++EQ       +E  +++IG +  
Sbjct: 197  HQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQSAIGFLTR 256

Query: 1024 AVRNFHGNNTNKC-------NLVCGHCNKNGHETK---------NYLSATQNGGLRGT 1149
                     T+         +++C HC ++GHE K         ++ +   NGG RG+
Sbjct: 257  QSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGS 314


>ref|XP_004243119.1| PREDICTED: uncharacterized protein LOC101247933 [Solanum
            lycopersicum]
          Length = 528

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 12/216 (5%)
 Frame = +1

Query: 535  KKINTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL*IANK 714
            K  N++I SWIF      ++ SI   ++A  +  ++  R+++ N P     K  L +  +
Sbjct: 88   KANNSIICSWIFNSADETIQPSIVAHQIAHELWTDITARYKSTNAPRSWQLKSDLQMLRQ 147

Query: 715  R----------YICGDILCQIKETVGRTCNHEQLPICDCEKTATESAKRHEKEKLWQFLF 864
            +          +I  +I  Q+  ++   C       C C   A +   R E+EK   FL 
Sbjct: 148  KGQSVVSFYNQFI--NIWNQLYGSIDPNCG------CICPVGA-KMLLRFEEEKTHAFLL 198

Query: 865  *LDTTNIRKIRSLILDEDTLSNVNQAYAKIIQQEQVQNMTKEDDENSIGGVVFAVRNFHG 1044
             LD       RS I     L  +N+AY  + Q+E+ +++    D+++  G+ FAV     
Sbjct: 199  GLDDAQFGATRSEIFGTHPLFVLNEAYYLVSQEERHKSIVCNRDDHT-DGLAFAVET--- 254

Query: 1045 NNTNKCNLVCGHCNKNGHETKN--YLSATQNGGLRG 1146
              T      C HC KNGH  +    L    +GG RG
Sbjct: 255  QPTPPLKYKCTHCGKNGHSAERCFILIGFPSGGRRG 290


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 54.7 bits (130), Expect(2) = 4e-06
 Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
 Frame = +1

Query: 541  INTLIRSWIFKHHRILLRASITKTRVAKTI*NELLQRFRAQNRPDILN*KQQL*IANKRY 720
            +N++I  WI       ++A++T    A  +  +L QRF   N+  I   + QL       
Sbjct: 94   VNSMIVGWIRTSIEPKVKATVTFISDAHLLWKDLKQRFSVGNKVRIHQIRAQL------S 147

Query: 721  ICGDILCQIKETVGRTCN-------HEQLPICDCEK----TATESAKRHEKEKLWQFLF* 867
             C      + E  GR  N       ++ + +C C        +E  K  E+EK+ QF+  
Sbjct: 148  SCRQDGQAVIEYYGRLSNLWEEYNIYKPVTVCTCGLCRCGATSEPTKEREEEKIHQFVLG 207

Query: 868  LDTTNIRKIRSLILDEDTLSNVNQAYAKIIQQEQ--VQNMTKEDDENSIGGVVFAVRNFH 1041
            LD +    + + +++ D L ++ + Y+++I++EQ       +E  E ++G +    +  H
Sbjct: 208  LDESRFGGLCATLINMDPLPSLGEIYSRVIREEQRLASVHVREQKEEAVGFLARREQLDH 267

Query: 1042 ------------------GNNTNKCNLVCGHCNKNGHETK 1107
                               N+  K  + C +C + GHE K
Sbjct: 268  HSRVDASSSRSEHTGGSRSNSIIKGRVTCSNCGRTGHEKK 307



 Score = 24.3 bits (51), Expect(2) = 4e-06
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 1113 LVGYPKWWLER 1145
            +VG+P WW ER
Sbjct: 312  IVGFPDWWSER 322