BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00003164
         (3296 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi...   685   0.0  
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi...   683   0.0  
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi...   683   0.0  
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   679   0.0  
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr...   672   0.0  
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi...   669   0.0  
gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily p...   666   0.0  
ref|XP_002306741.1| pentatricopeptide repeat-containing family p...   657   0.0  
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis...   653   0.0  
gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus...   625   e-176
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   623   e-175
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   615   e-173
ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutr...   603   e-169
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi...   603   e-169
ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containi...   602   e-169
ref|XP_002880012.1| pentatricopeptide repeat-containing protein ...   599   e-168
ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar...   595   e-167
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   587   e-164
ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Caps...   574   e-160
dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgar...   444   e-121

>ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Solanum tuberosum]
          Length = 522

 Score =  685 bits (1767), Expect = 0.0
 Identities = 340/512 (66%), Positives = 418/512 (81%), Gaps = 1/512 (0%)
 Frame = +1

Query: 196  MSRCFCSYTQPSTSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRV 375
            MS   CS    STS++KFIS QP L MLE +C+T+ DLK IHA LIK+GL+KDKIA+SRV
Sbjct: 1    MSSSVCS----STSISKFISDQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIASSRV 56

Query: 376  LAVCANSPA-SDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSW 552
            LA  A SP   D+NYA LVF HIENPNLF WNTIIRGFS SSTP+ AI LF  ML +S  
Sbjct: 57   LAFSAKSPPIGDINYANLVFTHIENPNLFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQV 116

Query: 553  SPGRLTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARK 732
             P  LTYPSVFKAY + GL +NGAQLHGR++K GLEFD FIRNT+L+MYASCG+L EARK
Sbjct: 117  QPHLLTYPSVFKAYARGGLVKNGAQLHGRIIKLGLEFDTFIRNTMLYMYASCGFLVEARK 176

Query: 733  LFEEDEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVA 912
            LF+EDE+ DVV+WNSMI GLAK GEIDDS RLF KM+ RNDV+WN+MISG+VRNG    A
Sbjct: 177  LFDEDEIEDVVSWNSMIMGLAKSGEIDDSWRLFSKMSTRNDVSWNSMISGFVRNGKWNEA 236

Query: 913  FDLFDEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINM 1092
             +LF  MQE+ +KPSE+T+VSLLNA   LGALEQG WI+ Y+KK N++LNVIV+TAII+M
Sbjct: 237  LELFSTMQEENIKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDM 296

Query: 1093 YCKCGDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSF 1272
            YCKCG+++MA  VF + +NKGLS WNS+I GLA NGF  +AIKLF+RL+ S L+PDSVSF
Sbjct: 297  YCKCGNVEMAWHVFISISNKGLSSWNSMILGLATNGFEDDAIKLFARLQCSILKPDSVSF 356

Query: 1273 LGVLTACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMP 1452
            +GVLTACNHSGLV++A++YF+LMK+ Y IEPS++HYGC++D LGRAG +E+A+E+ + M 
Sbjct: 357  IGVLTACNHSGLVDKAKDYFQLMKKEYGIEPSIKHYGCMVDILGRAGLVEEADEVIRSMK 416

Query: 1453 MEPDVAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIH 1632
            MEPD  IW SLLSA R HGN+ +A+ +A+ L +LDPNE+S Y+L++N+YAASG F +AI 
Sbjct: 417  MEPDAVIWCSLLSACRSHGNMELARWSAENLLELDPNESSGYVLMANMYAASGQFAEAID 476

Query: 1633 ERVSMKDKQIEKQPGCSSIEVDGEVHEFLASG 1728
            ER+SMKDK I K+PGCSS+EV+GEVHEF ASG
Sbjct: 477  ERISMKDKHIAKEPGCSSVEVNGEVHEF-ASG 507


>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 550

 Score =  683 bits (1763), Expect = 0.0
 Identities = 338/519 (65%), Positives = 414/519 (79%)
 Frame = +1

Query: 196  MSRCFCSYTQPSTSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRV 375
            M+ C CS+T  STS++KFIS +P L MLENQC+ +KDL+ IHA LIKTGL  D +AASRV
Sbjct: 1    MTPCCCSFTS-STSISKFISDKPHLFMLENQCTNMKDLQKIHAHLIKTGLANDTVAASRV 59

Query: 376  LAVCANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWS 555
            LA CA SPA D+NYAY+VF HI NPNLF WNTIIRGFS SS PE AISLF  MLV+S+  
Sbjct: 60   LAFCA-SPAGDINYAYMVFRHIHNPNLFIWNTIIRGFSNSSNPEAAISLFIDMLVTSTVQ 118

Query: 556  PGRLTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKL 735
            P RLTYPSVFKAY QLGLA +GAQLHGRV+K GLE D F+RNTI+HMY++CG LSEAR++
Sbjct: 119  PQRLTYPSVFKAYAQLGLAHDGAQLHGRVVKLGLESDQFVRNTIIHMYSNCGLLSEARRV 178

Query: 736  FEEDEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAF 915
            F+ED   D+VAWNSMI GL+K GE+ +SRRLFDKM  RN ++WN+MI G VRNG    A 
Sbjct: 179  FDEDLEFDIVAWNSMIMGLSKCGEVGESRRLFDKMPQRNSISWNSMIGGSVRNGMYTEAL 238

Query: 916  DLFDEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMY 1095
            DLF EMQ+Q++KPSE+T+VSLLNASA LGA+ QGEWIH+YI+K +I LN IV+TAIINMY
Sbjct: 239  DLFGEMQKQKIKPSEFTMVSLLNASAQLGAIRQGEWIHEYIRKNHIQLNPIVVTAIINMY 298

Query: 1096 CKCGDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFL 1275
             KCG I+ A  VFE A   GLSCWNS+I GLA NG  +EAI+LFSRL++S+  PD VSFL
Sbjct: 299  SKCGSIEKAVHVFEAAPRTGLSCWNSIIMGLATNGCEEEAIELFSRLKSSSFVPDDVSFL 358

Query: 1276 GVLTACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPM 1455
            GVLTAC+HSG+V +AR YF +M+E Y I PS++HY C++D LGRAG LE+AE+L   MP+
Sbjct: 359  GVLTACSHSGMVEKARKYFSVMRETYRIAPSIKHYSCMVDVLGRAGLLEEAEKLIDGMPL 418

Query: 1456 EPDVAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHE 1635
            + D  IWGSLLS+ R+H +I MAK AAK + +LDP++   Y+L+SNVYAAS  FE+A+ E
Sbjct: 419  KADAIIWGSLLSSCRKHRDIEMAKRAAKHVIELDPSDCCGYVLMSNVYAASSQFEEAMRE 478

Query: 1636 RVSMKDKQIEKQPGCSSIEVDGEVHEFLASGILQYQLPE 1752
            R+SMK ++IEK+PGCS IEVDGEVHEF+A G L  + PE
Sbjct: 479  RLSMKGQKIEKEPGCSLIEVDGEVHEFIAGGRLHQKAPE 517


>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Solanum lycopersicum]
          Length = 522

 Score =  683 bits (1762), Expect = 0.0
 Identities = 338/512 (66%), Positives = 417/512 (81%), Gaps = 1/512 (0%)
 Frame = +1

Query: 196  MSRCFCSYTQPSTSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRV 375
            MS   CS    STS++KFI  QP L MLE +C+T+ DLK IHA LIK+GL+KDKIAASRV
Sbjct: 1    MSSSVCS----STSISKFILDQPYLHMLETKCTTMTDLKKIHAHLIKSGLIKDKIAASRV 56

Query: 376  LAVCANSPA-SDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSW 552
            LA  A SP   D+NYA LVF HIENPN F WNTIIRGFS SSTP+ AI LF  ML +S  
Sbjct: 57   LAFSAKSPPIGDINYANLVFTHIENPNPFTWNTIIRGFSESSTPQYAIHLFIEMLNNSQV 116

Query: 553  SPGRLTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARK 732
             P  LTYPSVFKAY + G+A+NGAQLHGR+MK GLEFD FIRNT+L+MYASCG+L EARK
Sbjct: 117  QPHLLTYPSVFKAYARGGIAKNGAQLHGRIMKLGLEFDTFIRNTLLYMYASCGFLVEARK 176

Query: 733  LFEEDEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVA 912
            LF+EDE+ DVV+WNSMI GLAK GEIDDS RLF KM  RNDV+WN+MISG+VRNG    A
Sbjct: 177  LFDEDEIEDVVSWNSMIIGLAKSGEIDDSWRLFSKMPTRNDVSWNSMISGFVRNGKWNEA 236

Query: 913  FDLFDEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINM 1092
             +LF  MQE+ +KPSE+T+VSLLNA   LGALEQG WI+ Y+KK N++LNVIV+TAII+M
Sbjct: 237  LELFSTMQEENVKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKNNVELNVIVVTAIIDM 296

Query: 1093 YCKCGDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSF 1272
            YCKC +++MA  VF +++NKGLS WNS+I GLA NGF  +AIKLF+RL+ S L+PDSVSF
Sbjct: 297  YCKCANVEMAWHVFVSSSNKGLSSWNSMILGLATNGFEDDAIKLFARLQCSILKPDSVSF 356

Query: 1273 LGVLTACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMP 1452
            +GVLTACNHSGLV +A++YF+LMK  Y IEPS++HYGC++D LGRAG +E+AEE+ + M 
Sbjct: 357  IGVLTACNHSGLVEKAKDYFQLMKMEYGIEPSIKHYGCMVDILGRAGLVEEAEEVIRSMK 416

Query: 1453 MEPDVAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIH 1632
            MEPD  IWGSLLSA R HGN+ +A+ +A+ L +LDPNE+S Y+L++N+YAASG F++A++
Sbjct: 417  MEPDAVIWGSLLSACRSHGNVELARWSAENLLELDPNESSGYVLMANMYAASGLFDEAMN 476

Query: 1633 ERVSMKDKQIEKQPGCSSIEVDGEVHEFLASG 1728
            ER+SMK+K I K+PGCSS+E++GEVHEF ASG
Sbjct: 477  ERISMKEKHIAKEPGCSSVEINGEVHEF-ASG 507


>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic [Vitis vinifera]
            gi|302143555|emb|CBI22116.3| unnamed protein product
            [Vitis vinifera]
          Length = 533

 Score =  679 bits (1752), Expect = 0.0
 Identities = 337/516 (65%), Positives = 408/516 (79%), Gaps = 2/516 (0%)
 Frame = +1

Query: 211  CSYTQPS--TSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAV 384
            CS T PS  TS++KFIS  P L +LE  C+T+KDL+ IHA L+KTGL K  +A S VLA 
Sbjct: 6    CSLTSPSPSTSISKFISDHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAF 65

Query: 385  CANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSPGR 564
            CA SP  D+NYAYLVF  I +PNLF+WNTIIRGFS+SSTP  AISLF  ML+ SS  P R
Sbjct: 66   CATSPGGDINYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHR 125

Query: 565  LTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEE 744
            LTYPSVFKAY QLGLA  GAQLHGRV+K GL+FDPFIRNTI++MYA+CG+LSE  K F E
Sbjct: 126  LTYPSVFKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYE 185

Query: 745  DEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLF 924
                D+VAWNSMI GLAK GE+D+SR+LFD+M  RN V+WN+MISGYVRNG    A DLF
Sbjct: 186  RMDFDIVAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLF 245

Query: 925  DEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCKC 1104
             +MQE+R+KPSE+T+VSLLNASA LGAL+QGEWIHDYI+K N +LNVIV  +II+MYCKC
Sbjct: 246  GQMQEERIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKC 305

Query: 1105 GDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGVL 1284
            G I  A QVFE A  KGLS WN++I GLA NG   EAI+LFSRLE SNL PD V+F+GVL
Sbjct: 306  GSIGEAFQVFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVL 365

Query: 1285 TACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEPD 1464
            TACN+SGLV++A+ YF LM + Y+IEPS++HY C++D LGRAG LE+AEEL + MP+ PD
Sbjct: 366  TACNYSGLVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPD 425

Query: 1465 VAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERVS 1644
              IW SLLSA R+HGN+ +AK AAK +  LD N++  Y+LLSN+YAAS  FE+A+ +R+S
Sbjct: 426  AIIWSSLLSACRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLS 485

Query: 1645 MKDKQIEKQPGCSSIEVDGEVHEFLASGILQYQLPE 1752
            MK+KQIEK+PGCS IEV+GE+HEF+A G L  Q  E
Sbjct: 486  MKEKQIEKEPGCSLIEVNGEIHEFVAGGRLHPQAQE 521


>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
            gi|557539373|gb|ESR50417.1| hypothetical protein
            CICLE_v10031197mg [Citrus clementina]
          Length = 534

 Score =  672 bits (1733), Expect = 0.0
 Identities = 335/511 (65%), Positives = 408/511 (79%), Gaps = 1/511 (0%)
 Frame = +1

Query: 232  TSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAVCANSPASDM 411
            TS++KFIS QP L +L+ QC+++KDLK IHA LIKTGL KD IAASR+LA C  SPA D+
Sbjct: 11   TSMSKFISDQPLLSLLDKQCTSMKDLKKIHAHLIKTGLPKDPIAASRILAFCT-SPAGDI 69

Query: 412  NYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSPGRLTYPSVFKA 591
            NYAYLVF  I+ PNLF WNTIIRGFS+SSTP  AI LF  MLV+S   P RLTYPS+FKA
Sbjct: 70   NYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA 129

Query: 592  YTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEE-DEVLDVVA 768
            Y QLGLA +GAQLHGRV+KQGLEFD FI NTI++MYA+CG+LSEAR +F+E D   DVVA
Sbjct: 130  YAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLIFDEVDTEFDVVA 189

Query: 769  WNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLFDEMQEQRM 948
            WNSMI GLAK GEID+SRRLFDKM  RN V+WN+MISGYVRN   + A +LF EMQEQ +
Sbjct: 190  WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI 249

Query: 949  KPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCKCGDIDMACQ 1128
            KPSE+T+VSLLNA A LGA+ QGEWIH+++     +LN IV+TAII+MYCKCG  + A Q
Sbjct: 250  KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQ 309

Query: 1129 VFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGVLTACNHSGL 1308
            VF     KGLSCWNS++ GLA NG+  EAIKLFS L++SNL+PD +SF+ VLTACNHSG 
Sbjct: 310  VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK 369

Query: 1309 VNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEPDVAIWGSLL 1488
            VN+A++YF LM E Y+I+PS++HY C++DALGRAG LE+AE+L + MP +PD  IWGSLL
Sbjct: 370  VNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLL 429

Query: 1489 SASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERVSMKDKQIEK 1668
            SA R+HGNI MAK AAK + +LD NE+  Y+L+SN+YAAS  FE+A+ ER+ MK+ +IEK
Sbjct: 430  SACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK 489

Query: 1669 QPGCSSIEVDGEVHEFLASGILQYQLPEYVL 1761
            +PGCS IEVDGEVHEF+A G L  + PE  L
Sbjct: 490  EPGCSLIEVDGEVHEFVAGGRLHPKAPEVYL 520


>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Citrus sinensis]
          Length = 534

 Score =  669 bits (1726), Expect = 0.0
 Identities = 334/511 (65%), Positives = 405/511 (79%), Gaps = 1/511 (0%)
 Frame = +1

Query: 232  TSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAVCANSPASDM 411
            TS++KFIS QP L +L+ QC+++KDLK IHA LIKTGL KD IAASR+L  C  SPA D+
Sbjct: 11   TSMSKFISDQPLLSLLDKQCTSMKDLKKIHAHLIKTGLAKDPIAASRILTFCT-SPAGDI 69

Query: 412  NYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSPGRLTYPSVFKA 591
            NYAYLVF  I+ PNLF WNTIIRGFS+SSTP  AI LF  MLV+S   P RLTYPS+FKA
Sbjct: 70   NYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA 129

Query: 592  YTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEE-DEVLDVVA 768
            Y QLGLA +GAQLHGRV+KQGLEFD FI NTI++MYA+CG+LSEAR +F+E D   DVVA
Sbjct: 130  YAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVA 189

Query: 769  WNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLFDEMQEQRM 948
            WNSMI GLAK GEID+SRRLFDKM  RN V+WN+MISGYVRN   + A +LF EMQEQ +
Sbjct: 190  WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI 249

Query: 949  KPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCKCGDIDMACQ 1128
            KPSE+T+VSLLNA A LGA+ QGEWIH+++     +LN IV+TAII+MYCKCG  + A Q
Sbjct: 250  KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQ 309

Query: 1129 VFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGVLTACNHSGL 1308
            VF     KGLSCWNS++ GLA NG+  EAIKLFS L++SNL PD  SF+ VLTACNHSG 
Sbjct: 310  VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLTPDYTSFIAVLTACNHSGK 369

Query: 1309 VNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEPDVAIWGSLL 1488
            VN+A++YF LM E Y+I+PS++HY C++DALGRAG LE+AE+L + MP +PD  IWGSLL
Sbjct: 370  VNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLL 429

Query: 1489 SASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERVSMKDKQIEK 1668
            SA R+HGNI MAK AAK + +LD NE+  Y+L+SN+YAAS  FE+A+ ER+ MK+ +IEK
Sbjct: 430  SACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK 489

Query: 1669 QPGCSSIEVDGEVHEFLASGILQYQLPEYVL 1761
            +PGCS IEVDGEVHEF+A G L  + PE  L
Sbjct: 490  EPGCSLIEVDGEVHEFVAGGRLHPKAPEVYL 520


>gb|EOX93021.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
            cacao]
          Length = 538

 Score =  666 bits (1719), Expect = 0.0
 Identities = 329/520 (63%), Positives = 413/520 (79%), Gaps = 1/520 (0%)
 Frame = +1

Query: 196  MSRCFCSYTQPSTSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRV 375
            M +CFCS T    S+ KFIS QP L +LEN C+++KDLK +HAQLIKTGLV D IAASRV
Sbjct: 1    MVQCFCSLTPSPASITKFISDQPYLSLLENNCTSMKDLKKLHAQLIKTGLVNDIIAASRV 60

Query: 376  LAVCANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWS 555
            LA C  SPA DMNYAYLVF  I+NPNLF WNTIIRGFS+SS P+IAISLF  MLV SS  
Sbjct: 61   LAFCV-SPAGDMNYAYLVFTQIKNPNLFTWNTIIRGFSQSSNPQIAISLFIDMLVGSSIQ 119

Query: 556  PGRLTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKL 735
            P RLTYPSVFKAY QLGLA +G QLHGRV+K GL++D FIRNTI++MYA+CG LSEA ++
Sbjct: 120  PERLTYPSVFKAYAQLGLACDGRQLHGRVIKLGLDYDQFIRNTIIYMYANCGLLSEAWRM 179

Query: 736  FEEDEV-LDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVA 912
            F+E+ + LD+VAWNSMI GLAK GE+D+SRRLF+KM  RN V+WN+MISGYVRNG    A
Sbjct: 180  FDEEHMELDIVAWNSMIIGLAKCGEVDESRRLFNKMVSRNTVSWNSMISGYVRNGRFLEA 239

Query: 913  FDLFDEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINM 1092
             +LF EMQE+ ++PSE+T+VSLLNA A LGA+ QG+WIHDYI K N +LN IV+TAII+M
Sbjct: 240  LELFQEMQEEHIRPSEFTMVSLLNACACLGAITQGKWIHDYILKQNFELNGIVVTAIIDM 299

Query: 1093 YCKCGDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSF 1272
            YCKCG+ + A QVF  +  +GLSCWNS+I GLA NG   EA +LFS+LE+ +L+PD V+F
Sbjct: 300  YCKCGNAEKALQVFTTSPKEGLSCWNSMILGLATNGCENEARQLFSKLESLSLKPDHVTF 359

Query: 1273 LGVLTACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMP 1452
            +GVL ACN +G+V++A+ YF LM E Y+I+P+++HY C++D LG AG LE+AE+L + MP
Sbjct: 360  IGVLMACNSAGMVDKAKYYFSLMTEKYKIKPTIKHYSCMVDVLGNAGLLEEAEQLIRSMP 419

Query: 1453 MEPDVAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIH 1632
            +  D  IWGSLLSA R+HGN+ MAK AAK + +LDP E S Y+L+SNVYAA+  FE+AI 
Sbjct: 420  VNEDAIIWGSLLSACRKHGNVGMAKRAAKLVIELDPAERSGYVLMSNVYAATRQFEEAIK 479

Query: 1633 ERVSMKDKQIEKQPGCSSIEVDGEVHEFLASGILQYQLPE 1752
            +R+SMK+KQ++K+PGCS IEV+  VHEF++ G L  Q  E
Sbjct: 480  QRLSMKEKQLQKEPGCSLIEVNDVVHEFVSGGRLHPQAKE 519


>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222856190|gb|EEE93737.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 509

 Score =  657 bits (1695), Expect = 0.0
 Identities = 328/488 (67%), Positives = 395/488 (80%), Gaps = 1/488 (0%)
 Frame = +1

Query: 274  MLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAVCANSPASDMNYAYLVFNHIENPN 453
            ML+  C+++KDL+ IHAQLIKTGL KD IAASRVLA C  SPA D+NYAYLVF  I NPN
Sbjct: 1    MLDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCT-SPAGDINYAYLVFTQIRNPN 59

Query: 454  LFAWNTIIRGFSRSSTPEIAISLFAHMLVSS-SWSPGRLTYPSVFKAYTQLGLAENGAQL 630
            LF WNTIIRGFS+SSTP  AISLF  M+ +S +  P RLTYPSVFKAY QLGLA  GAQL
Sbjct: 60   LFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQL 119

Query: 631  HGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEEDEVLDVVAWNSMISGLAKHGEI 810
            HGRV+K GLE D FI+NTIL+MY +CG+L EA+++F+     DVV WN+MI GLAK GEI
Sbjct: 120  HGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEI 179

Query: 811  DDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLFDEMQEQRMKPSEYTVVSLLNAS 990
            D SRRLFDKM  RN V+WN+MISGYVR G    A +LF  MQE+ +KPSE+T+VSLLNA 
Sbjct: 180  DKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNAC 239

Query: 991  ADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCKCGDIDMACQVFENATNKGLSCWN 1170
            A LGAL QGEWIHDYI K N  LN IVITAII+MY KCG ID A QVF++A  KGLSCWN
Sbjct: 240  ACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWN 299

Query: 1171 SLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGVLTACNHSGLVNEARNYFKLMKEM 1350
            SLI GLA +G   EA++LFS+LE+SNL+PD VSF+GVLTACNH+G+V+ A++YF LM E 
Sbjct: 300  SLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSET 359

Query: 1351 YEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEPDVAIWGSLLSASRQHGNIRMAKL 1530
            Y+IEPS++HY C++D LGRAG LE+AEEL K MP+ PD  IWGSLLS+ R++GNI MAK 
Sbjct: 360  YKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQ 419

Query: 1531 AAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERVSMKDKQIEKQPGCSSIEVDGEVH 1710
            AAK +N+LDPNE+SS++LLSNVYAA  HFE+AI +R+S+K+KQ++K+PGCS IEV+GEVH
Sbjct: 420  AAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGEVH 479

Query: 1711 EFLASGIL 1734
            EF+A G L
Sbjct: 480  EFVAGGRL 487


>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
            gi|587904202|gb|EXB92403.1| hypothetical protein
            L484_021387 [Morus notabilis]
          Length = 530

 Score =  653 bits (1685), Expect = 0.0
 Identities = 324/511 (63%), Positives = 407/511 (79%), Gaps = 5/511 (0%)
 Frame = +1

Query: 211  CSYT---QPS-TSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVL 378
            CS T    PS TS+AKFIS QP L MLE +C+T+ DL+ IHA LIKTGL+   IA+SR+L
Sbjct: 6    CSQTFTPSPSPTSIAKFISDQPHLSMLEKRCATMSDLRKIHAHLIKTGLISHTIASSRLL 65

Query: 379  AVCANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSP 558
            A CA SPA ++NYA +VF+ I+NPNLF WNTIIRGFSRSSTP+ AI LF  MLV S   P
Sbjct: 66   AFCA-SPAGNINYALMVFSQIQNPNLFIWNTIIRGFSRSSTPQTAIFLFIDMLVGSPLEP 124

Query: 559  GRLTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLF 738
             RLTYPSVFKAY QLGLA  GAQLHGRV+K GL+ D F+RNTI+HMY +CG+LSEAR+LF
Sbjct: 125  QRLTYPSVFKAYAQLGLACFGAQLHGRVIKLGLDCDRFVRNTIIHMYINCGFLSEARQLF 184

Query: 739  EEDEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFD 918
            +E   LD+VAWNSMI GL+K GE+ +SRRLFD+M  RN V+WN+MISGYVRNG    A +
Sbjct: 185  DESSELDLVAWNSMIMGLSKCGEVGESRRLFDRMPLRNSVSWNSMISGYVRNGKCVEALE 244

Query: 919  LFDEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYC 1098
            LF +MQ + +K SE+T+VSLLNAS  LGA+ QGEWIH+YI K  I+LNVIV+TAII+MYC
Sbjct: 245  LFGKMQGEGIKASEFTMVSLLNASGRLGAIRQGEWIHEYITKNGIELNVIVVTAIIDMYC 304

Query: 1099 KCGDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENS-NLEPDSVSFL 1275
            KCG ++ A  VF+ A   GLSCWNS++ GLA NG  +EA++LFSRLE+S +L PD VSFL
Sbjct: 305  KCGSVNKALSVFKTAPKLGLSCWNSMVMGLAMNGCEEEALELFSRLESSIDLRPDGVSFL 364

Query: 1276 GVLTACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPM 1455
             VLTACNHSG+V++AR+YF LM+  Y IEPS  HY C++D LG+AG LE+AE+L   MP+
Sbjct: 365  AVLTACNHSGMVDKARDYFSLMRGKYNIEPSTRHYSCMVDVLGKAGHLEEAEKLILSMPI 424

Query: 1456 EPDVAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHE 1635
             PD  IWGSLLSA R+HGNI MA+ A + + +LDP+E+S+Y+L+SNVY +S H+++A+ +
Sbjct: 425  NPDAIIWGSLLSACRKHGNIEMAQRALERVIELDPSESSAYVLMSNVYGSSSHYDEAVKQ 484

Query: 1636 RVSMKDKQIEKQPGCSSIEVDGEVHEFLASG 1728
            R++MK+K+IEK+PGCS IEVDGEVHEF+A G
Sbjct: 485  RINMKEKRIEKEPGCSLIEVDGEVHEFVAFG 515


>gb|ESW13851.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
          Length = 525

 Score =  625 bits (1613), Expect = e-176
 Identities = 316/510 (61%), Positives = 392/510 (76%), Gaps = 2/510 (0%)
 Frame = +1

Query: 211  CSYTQPSTS--VAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAV 384
            CS   PS+S  +A FIS  PCL ML+NQC+ +KDL+ IH  +IKTGL  D IAASRVL  
Sbjct: 5    CSALPPSSSPSIANFISDHPCLTMLQNQCTNMKDLQKIHPHIIKTGLALDHIAASRVLTF 64

Query: 385  CANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSPGR 564
            CA+S + D+NYAYLVF  I NPNL+ WNTIIRGFSRSSTP+ AISLF  ML S+   P R
Sbjct: 65   CASS-SGDINYAYLVFTGIPNPNLYCWNTIIRGFSRSSTPQFAISLFVDMLYSAV-EPQR 122

Query: 565  LTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEE 744
            LTYPSVFKAY QLG   +GAQLHGRV+K GLE D FI NTIL+MYA+ G +SEAR++F+E
Sbjct: 123  LTYPSVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTILYMYANSGLMSEARRVFDE 182

Query: 745  DEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLF 924
               LDVVA NSMI GLAK GE+D SRRLFD M  R  V+WN+MISGYVRNG      +LF
Sbjct: 183  PLELDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTAVSWNSMISGYVRNGRLTEGLELF 242

Query: 925  DEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCKC 1104
             +MQE+ ++PSE+T+VSLL+A A LGAL+ GEW+HDYIK+ N  LNVIV+TAII+MYCKC
Sbjct: 243  RKMQEEGVEPSEFTMVSLLSACAHLGALQHGEWVHDYIKRGNFKLNVIVLTAIIDMYCKC 302

Query: 1105 GDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGVL 1284
            G I+ A +VF  +  +GL CWNS+I GLA NG  +EAI+ FS+LE+SN++PD VSF+GVL
Sbjct: 303  GSIEKAVEVFAASPTRGLPCWNSIIIGLALNGHEREAIEYFSKLESSNIKPDCVSFIGVL 362

Query: 1285 TACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEPD 1464
            TAC + G V EAR+YF LM + YEIEPS++HY CL++ LG A  LE+AEE+ K M +E D
Sbjct: 363  TACKYLGAVREARDYFALMMDKYEIEPSIKHYTCLVEVLGHAALLEEAEEVIKGMSIEAD 422

Query: 1465 VAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERVS 1644
              IWGSLLS+ R+HGN+ +AK AA+ + +L+P E S YLL+SNV AAS  FE+A+  R+ 
Sbjct: 423  FIIWGSLLSSCRKHGNVEIAKRAAQRVFELNPREASGYLLMSNVQAASNQFEEALEHRIL 482

Query: 1645 MKDKQIEKQPGCSSIEVDGEVHEFLASGIL 1734
            MK++ +EK+PGCSSIE+ GEVHEFLA G L
Sbjct: 483  MKERLVEKEPGCSSIELHGEVHEFLAGGRL 512


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  623 bits (1606), Expect = e-175
 Identities = 306/516 (59%), Positives = 404/516 (78%), Gaps = 1/516 (0%)
 Frame = +1

Query: 208  FCSYTQPS-TSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAV 384
            FC    PS  +++K IS Q  L ML+  C+T+KDLK IH+QLIKTGL KD  AASR+LA 
Sbjct: 4    FCCLLPPSPATISKLISDQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAF 63

Query: 385  CANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSPGR 564
            CA SPA D+NYAYLVF  I+NPN+FAWNTIIRGFSRSS P+ +ISL+  ML++S   P R
Sbjct: 64   CA-SPAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQR 122

Query: 565  LTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEE 744
            LTYPSVFKA+ QL LA  GAQLHG+++K GLE D FIRNTIL MY +CG+ SEARK+F+ 
Sbjct: 123  LTYPSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDR 182

Query: 745  DEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLF 924
                D+VAWN+MI G+AK G +D+SRRLFDKM+ RN V+WN+MISGYVRNG    A +LF
Sbjct: 183  GMDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELF 242

Query: 925  DEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCKC 1104
             +MQ +R++PSE+T+VSLLNA A LGA+ QGEWIHDY+ K   +LN IV+TAII+MY KC
Sbjct: 243  QKMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKC 302

Query: 1105 GDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGVL 1284
            G ID A QVF++A  +GLSCWNS+I GLA NG   EA++LFS L++S+L PD VSF+ VL
Sbjct: 303  GSIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVL 362

Query: 1285 TACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEPD 1464
            TAC+H+G+V++A++YF LM++ Y+I+P ++H+ C++D LGRAG LE+AEEL + M ++PD
Sbjct: 363  TACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPD 422

Query: 1465 VAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERVS 1644
              IWGSLL +  ++GNI+MAK AA  L +L+P+E+SS++L++N YAA+ +FE+A+ ER++
Sbjct: 423  AIIWGSLLWSCCKYGNIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERLT 482

Query: 1645 MKDKQIEKQPGCSSIEVDGEVHEFLASGILQYQLPE 1752
            +K+  I K+PGCS IEV GEVHEF+A G    ++ E
Sbjct: 483  LKENHIGKEPGCSCIEVGGEVHEFVAGGRAHPEIKE 518


>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Glycine max]
          Length = 534

 Score =  615 bits (1585), Expect = e-173
 Identities = 314/528 (59%), Positives = 407/528 (77%), Gaps = 6/528 (1%)
 Frame = +1

Query: 211  CSYTQPSTS----VAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVL 378
            CS   PS+S    +AKFIS QPCL ML+ QC+ +KDL+ IHA +IKTGL    +AASRVL
Sbjct: 5    CSALPPSSSSSPSIAKFISDQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVL 64

Query: 379  AVCANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSP 558
              CA+S + D+NYAYL+F  I +PNL+ WNTIIRGFSRSSTP +AISLF  ML SS   P
Sbjct: 65   TFCASS-SGDINYAYLLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVL-P 122

Query: 559  GRLTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLF 738
             RLTYPSVFKAY QLG   +GAQLHGRV+K GLE D FI+NTI++MYA+ G LSEAR++F
Sbjct: 123  QRLTYPSVFKAYAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVF 182

Query: 739  EEDEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFD 918
            +E   LDVVA NSMI GLAK GE+D SRRLFD M  R  VTWN+MISGYVRN     A +
Sbjct: 183  DELVDLDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALE 242

Query: 919  LFDEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYC 1098
            LF +MQ +R++PSE+T+VSLL+A A LGAL+ GEW+HDY+K+ + +LNVIV+TAII+MYC
Sbjct: 243  LFRKMQGERVEPSEFTMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYC 302

Query: 1099 KCGDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLG 1278
            KCG I  A +VFE +  +GLSCWNS+I GLA NG+ ++AI+ FS+LE S+L+PD VSF+G
Sbjct: 303  KCGVIVKAIEVFEASPTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIG 362

Query: 1279 VLTACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPME 1458
            VLTAC + G V +AR+YF LM   YEIEPS++HY C+++ LG+A  LE+AE+L K MP++
Sbjct: 363  VLTACKYIGAVGKARDYFSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLK 422

Query: 1459 PDVAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHER 1638
             D  IWGSLLS+ R+HGN+ +AK AA+ + +L+P++ S YLL+SNV AAS  FE+A+ +R
Sbjct: 423  ADFIIWGSLLSSCRKHGNVEIAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQR 482

Query: 1639 VSMKDKQIEKQPGCSSIEVDGEVHEFLASGILQYQLPE--YVLS*TNY 1776
            + M+++  EK+PGCSSIE+ GEVHEFLA G L  +  E  Y+L+ +++
Sbjct: 483  ILMRERLAEKEPGCSSIELYGEVHEFLAGGRLHPKAREIYYLLNDSSF 530


>ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutrema salsugineum]
            gi|557112734|gb|ESQ53018.1| hypothetical protein
            EUTSA_v10017572mg [Eutrema salsugineum]
          Length = 546

 Score =  603 bits (1555), Expect = e-169
 Identities = 294/508 (57%), Positives = 389/508 (76%)
 Frame = +1

Query: 205  CFCSYTQPSTSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAV 384
            C+   T P+ S    +S    + +++ QCST+++LK IHA LIKTGL+ D IAASRVLA 
Sbjct: 7    CYSGMTMPTFSSTISVSGNSHIRLIDTQCSTMRELKQIHANLIKTGLISDTIAASRVLAF 66

Query: 385  CANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSPGR 564
            C  SP SDM+YAYL+F  I + N F WNTIIRGFSRSS PE++I++F  M  S+S  P R
Sbjct: 67   CCTSP-SDMSYAYLLFTRINHKNPFVWNTIIRGFSRSSFPEMSITIFIDMFSSASAKPQR 125

Query: 565  LTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEE 744
            LTYPSVFKAY  LG A +G QLHG V+K+GLE D FIRNT+LHMYA+CG   EA ++F  
Sbjct: 126  LTYPSVFKAYASLGKARDGMQLHGMVIKEGLEDDSFIRNTMLHMYATCGCFVEAWRIFMA 185

Query: 745  DEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLF 924
             +  DVVAWNSM+ GLA++G I+ +++LFD+M  RN+++WN+MISG+V+NG  + A ++F
Sbjct: 186  MKHFDVVAWNSMMMGLARYGLIEQAQKLFDEMPQRNEISWNSMISGFVKNGRFKDALEMF 245

Query: 925  DEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCKC 1104
             +MQE+ +KP  +T+VSLLNA A LGA EQG WIH+YI K   +LN IVITA+I+MYCKC
Sbjct: 246  RKMQERNVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVKNRFELNSIVITALIDMYCKC 305

Query: 1105 GDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGVL 1284
            G I+   +VFE+A NK LSCWNS++ GLANNG+ + A+ LFS LE+S+LEPDSVSF+GVL
Sbjct: 306  GCIEEGLRVFESAPNKQLSCWNSMVLGLANNGYEERAMDLFSELESSDLEPDSVSFIGVL 365

Query: 1285 TACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEPD 1464
            TAC +SG V+EA  +F+LM+E Y IEPS++HY C+++ LG AG LE+AE + K MPME D
Sbjct: 366  TACAYSGKVDEAGEFFRLMREKYLIEPSIKHYTCMVNVLGGAGLLEEAEAMIKNMPMEQD 425

Query: 1465 VAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERVS 1644
              IW SLLSA R++GN+ MA+ AAKCL +LDP++   Y+L+SN YA+ G FE+A+ +RV 
Sbjct: 426  AIIWSSLLSACRKNGNVEMAERAAKCLKKLDPDDTCGYVLMSNAYASYGLFEEAVEQRVL 485

Query: 1645 MKDKQIEKQPGCSSIEVDGEVHEFLASG 1728
            MK++Q+EK+ GCSSIEVD EVHEF++ G
Sbjct: 486  MKERQMEKEIGCSSIEVDFEVHEFVSCG 513


>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Cucumis sativus]
            gi|449530724|ref|XP_004172343.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Cucumis sativus]
          Length = 543

 Score =  603 bits (1555), Expect = e-169
 Identities = 296/510 (58%), Positives = 386/510 (75%)
 Frame = +1

Query: 199  SRCFCSYTQPSTSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVL 378
            S C      P ++    IS+QP L M++  C+T++DL+  HA LIK+G   +  AASR+L
Sbjct: 4    SICGLPSLSPISTSKLIISNQPYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRIL 63

Query: 379  AVCANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSP 558
            A CA SP  +M+YAYLVF  ++NPNLF+WNT+IRGFS+SS P+IA+ LF  MLVSS   P
Sbjct: 64   AFCA-SPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEP 122

Query: 559  GRLTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLF 738
             RLTYPS+FKAY+QLGLA +GAQLHGR++K GL+FDPFIRNTIL+MYA+ G+LSEAR++F
Sbjct: 123  QRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIF 182

Query: 739  EEDEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFD 918
             ++   DVV+WNSMI GLAK GEID+SR+LFDKM  +N ++WN+MI GYVRNG  + A  
Sbjct: 183  NQEMEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALK 242

Query: 919  LFDEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYC 1098
            LF +MQE+R++PSE+T+VSLLNASA +GAL QG WIH+YIKK N+ LN IV+TAII+MYC
Sbjct: 243  LFIKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYC 302

Query: 1099 KCGDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLG 1278
            KCG I  A QVFE    + LS WNS+I GLA NG  KEAI +F  LE+S+L+PD +SF+ 
Sbjct: 303  KCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMA 362

Query: 1279 VLTACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPME 1458
            VLTACNH  +V+E   +F  MK  Y IEPS++HY  ++D + RAGFLE+AE+  K MP+E
Sbjct: 363  VLTACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIE 422

Query: 1459 PDVAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHER 1638
             D  IWG LLSA R +GN  MAK AA+ +N+LDP E   Y+L++N++A   +F  A+ +R
Sbjct: 423  KDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVGAMEKR 482

Query: 1639 VSMKDKQIEKQPGCSSIEVDGEVHEFLASG 1728
            V+M+ K++EK+PG S IEVD EVHEF+A G
Sbjct: 483  VAMRMKKVEKEPGGSFIEVDEEVHEFIAGG 512


>ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
            chloroplastic-like [Cicer arietinum]
          Length = 536

 Score =  602 bits (1551), Expect = e-169
 Identities = 299/517 (57%), Positives = 394/517 (76%), Gaps = 2/517 (0%)
 Frame = +1

Query: 208  FCSYTQPSTSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAVC 387
            F     P  S++KFIS QPCL ML+N C+T+K   +I+  +IKTGL  + IA++RVL  C
Sbjct: 8    FSQSPPPPPSISKFISDQPCLTMLQNHCTTLKHFHMIYPHIIKTGLTHNPIASTRVLTFC 67

Query: 388  ANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSPGRL 567
            A SP+ ++NYAY +F  + NPNL++WNTIIR FSRSSTP+ AISLF  ML S    P  L
Sbjct: 68   A-SPSGNINYAYKLFARMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQI-QPQHL 125

Query: 568  TYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEED 747
            TYPSVFKAY QL   + G+QLHG V+K GL+ D FI NTI++MYA+ G LSEA+++F+E 
Sbjct: 126  TYPSVFKAYAQLSAGDYGSQLHGMVVKLGLQRDQFIHNTIIYMYANSGLLSEAKRVFDEK 185

Query: 748  -EVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLF 924
             E+ DVVA+NSMI G AK GEID++R+LFD+M  R  VTWN+MISGYVRNG    A +LF
Sbjct: 186  LELGDVVAFNSMIMGFAKCGEIDEARKLFDEMFTRTSVTWNSMISGYVRNGKLMEALELF 245

Query: 925  DEMQ-EQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCK 1101
             +MQ E+R++PSE+T+VSLLNA A LGAL+ G+W+HDYIK+ + +LNVIV+TAII+MYCK
Sbjct: 246  HKMQLEERVEPSEFTMVSLLNACAHLGALQHGKWVHDYIKRNDFELNVIVLTAIIDMYCK 305

Query: 1102 CGDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGV 1281
            CG ++ A QVF+    +GLSCWNS+I GLA NG  +EA + FS LE S  +PDSVSF+GV
Sbjct: 306  CGSVENAIQVFDTYPGRGLSCWNSIIIGLAMNGHEREAFEFFSELELSKFKPDSVSFIGV 365

Query: 1282 LTACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEP 1461
            LTAC H G V++A++YF LM   Y+IEPS++HY C+++ LG+A FLE+AEEL + MP++P
Sbjct: 366  LTACKHLGAVDKAKDYFALMMNEYKIEPSIKHYTCMVEVLGQAAFLEEAEELIQGMPIKP 425

Query: 1462 DVAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERV 1641
            D  IWGSLLS+ R+HGN++ AK AA+ + +L+P++ S Y+L+SNVYAAS  FE+A+ +RV
Sbjct: 426  DAIIWGSLLSSCRKHGNVQRAKRAAQRVYELNPSDASGYVLMSNVYAASNKFEEAVEQRV 485

Query: 1642 SMKDKQIEKQPGCSSIEVDGEVHEFLASGILQYQLPE 1752
             MK+   EK+PGCSSIE+ GEVHEFLA G L  +  E
Sbjct: 486  LMKENLTEKEPGCSSIELYGEVHEFLAGGRLHPKTQE 522


>ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297325851|gb|EFH56271.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 542

 Score =  599 bits (1544), Expect = e-168
 Identities = 302/509 (59%), Positives = 380/509 (74%), Gaps = 1/509 (0%)
 Frame = +1

Query: 205  CFCSYTQPSTSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAV 384
            CF   T P+   + F+S   CL +++ +CST+++LK IHA LIKTGL+ D +AASRVLA 
Sbjct: 7    CFSGVTVPAIPSSGFVSGNTCLRLIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAF 66

Query: 385  CANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSS-SWSPG 561
            C  SP SD NYAYLVF  I + N F WNTIIRGFSRSS PE+AIS+F  ML SS S  P 
Sbjct: 67   CCASP-SDRNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQ 125

Query: 562  RLTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFE 741
            RLTYPSVFKAY  LGLA +G QLHGRV+K+GLE D FIRNT+LHMY +CG L EA +LF 
Sbjct: 126  RLTYPSVFKAYASLGLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFV 185

Query: 742  EDEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDL 921
                 DVVAWNS+I GLAK G ID +++LFD+M  RN V+WN+MISG+VRNG  + A ++
Sbjct: 186  GMMGFDVVAWNSIIMGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEM 245

Query: 922  FDEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCK 1101
            F EMQE+ +KP  +T+VSLLNA A LGA EQG WIH YI +   +LN IVITA+I+MYCK
Sbjct: 246  FREMQERDVKPDGFTMVSLLNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCK 305

Query: 1102 CGDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGV 1281
            CG  +   +VFE A  K LSCWNS+I GLANNG  + A+ LF  LE + LEPDSVSF+GV
Sbjct: 306  CGCFEEGLKVFECAPTKQLSCWNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGV 365

Query: 1282 LTACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEP 1461
            LTAC HSG V++A  +F+LM+E Y IEPS++HY C+++ LG AG L++AE L K MP+E 
Sbjct: 366  LTACAHSGEVHKAGEFFRLMREKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEG 425

Query: 1462 DVAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERV 1641
            D  IW SLL+A R++GN+ MAK AA CL  LDP+E   Y+L+SN YA+ G FE+A+ +R+
Sbjct: 426  DTIIWSSLLAACRKNGNVEMAKRAANCLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRL 485

Query: 1642 SMKDKQIEKQPGCSSIEVDGEVHEFLASG 1728
             MK++Q+EK+ GCSSIEVD EVHEF++ G
Sbjct: 486  LMKERQMEKEVGCSSIEVDFEVHEFVSCG 514


>ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g42920, chloroplastic; Flags: Precursor
            gi|4512663|gb|AAD21717.1| hypothetical protein
            [Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|110738441|dbj|BAF01146.1| hypothetical protein
            [Arabidopsis thaliana] gi|330255093|gb|AEC10187.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 559

 Score =  595 bits (1533), Expect = e-167
 Identities = 305/508 (60%), Positives = 376/508 (74%), Gaps = 1/508 (0%)
 Frame = +1

Query: 208  FCSYTQPSTSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAVC 387
            F   T P+   +  +S    L +++ QCST+++LK IHA LIKTGL+ D + ASRVLA C
Sbjct: 8    FSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFC 67

Query: 388  ANSPASDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSS-SWSPGR 564
              SP SDMNYAYLVF  I + N F WNTIIRGFSRSS PE+AIS+F  ML SS S  P R
Sbjct: 68   CASP-SDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR 126

Query: 565  LTYPSVFKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEE 744
            LTYPSVFKAY +LG A +G QLHG V+K+GLE D FIRNT+LHMY +CG L EA ++F  
Sbjct: 127  LTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLG 186

Query: 745  DEVLDVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLF 924
                DVVAWNSMI G AK G ID ++ LFD+M  RN V+WN+MISG+VRNG  + A D+F
Sbjct: 187  MIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMF 246

Query: 925  DEMQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCKC 1104
             EMQE+ +KP  +T+VSLLNA A LGA EQG WIH+YI +   +LN IV+TA+I+MYCKC
Sbjct: 247  REMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKC 306

Query: 1105 GDIDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGVL 1284
            G I+    VFE A  K LSCWNS+I GLANNGF + A+ LFS LE S LEPDSVSF+GVL
Sbjct: 307  GCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVL 366

Query: 1285 TACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEPD 1464
            TAC HSG V+ A  +F+LMKE Y IEPS++HY  +++ LG AG LE+AE L K MP+E D
Sbjct: 367  TACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEED 426

Query: 1465 VAIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERVS 1644
              IW SLLSA R+ GN+ MAK AAKCL +LDP+E   Y+LLSN YA+ G FE+A+ +R+ 
Sbjct: 427  TVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLL 486

Query: 1645 MKDKQIEKQPGCSSIEVDGEVHEFLASG 1728
            MK++Q+EK+ GCSSIEVD EVHEF++ G
Sbjct: 487  MKERQMEKEVGCSSIEVDFEVHEFISCG 514


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355518779|gb|AET00403.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  587 bits (1513), Expect = e-164
 Identities = 296/515 (57%), Positives = 389/515 (75%), Gaps = 5/515 (0%)
 Frame = +1

Query: 223  QPSTSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAVCANSPA 402
            Q   S++KFIS+ PCL ML+N C+TI     I+  +IKTGL  + IA++R L  CA SP+
Sbjct: 16   QQPPSISKFISNHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCA-SPS 74

Query: 403  SDMNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSPGRLTYPSV 582
             ++NYAY +F  + NPNL++WNTIIR FSRSSTP+ AISLF  ML S    P  LTYPSV
Sbjct: 75   GNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQI-QPQYLTYPSV 133

Query: 583  FKAYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEEDEVL-- 756
            FKAY QLG A  GAQLHGRV+K GL+ D FI NTI++MYA+ G +SEAR++F+  ++   
Sbjct: 134  FKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELY 193

Query: 757  --DVVAWNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLFDE 930
              DVVA NSMI G AK GEID+SR LFD M  R  V+WN+MISGYVRNG    A +LF++
Sbjct: 194  DHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNK 253

Query: 931  MQEQRMKPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCKCGD 1110
            MQ +  + SE+T+VSLLNA A LGAL+ G+W+HDYIK+ + +LNVIV+TAII+MYCKCG 
Sbjct: 254  MQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGS 313

Query: 1111 IDMACQVFENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNL-EPDSVSFLGVLT 1287
            ++ A +VFE    +GLSCWNS+I GLA NG  +EA + FS+LE+S L +PDSVSF+GVLT
Sbjct: 314  VENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLT 373

Query: 1288 ACNHSGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEPDV 1467
            AC H G +N+AR+YF+LM   YEIEPS++HY C++D LG+AG LE+AEEL K MP++PD 
Sbjct: 374  ACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDA 433

Query: 1468 AIWGSLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERVSM 1647
             IWGSLLS+ R+H N+++A+ AA+ + +L+P++ S Y+L+SNV+AAS  FE+AI +R+ M
Sbjct: 434  IIWGSLLSSCRKHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLM 493

Query: 1648 KDKQIEKQPGCSSIEVDGEVHEFLASGILQYQLPE 1752
            K+   EK+PGCSSIE+ GEVHEF+A G L  +  E
Sbjct: 494  KENLTEKEPGCSSIELYGEVHEFIAGGRLHPKTQE 528


>ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Capsella rubella]
            gi|565472276|ref|XP_006293940.1| hypothetical protein
            CARUB_v10022931mg [Capsella rubella]
            gi|482562647|gb|EOA26837.1| hypothetical protein
            CARUB_v10022931mg [Capsella rubella]
            gi|482562648|gb|EOA26838.1| hypothetical protein
            CARUB_v10022931mg [Capsella rubella]
          Length = 555

 Score =  574 bits (1479), Expect = e-160
 Identities = 292/499 (58%), Positives = 372/499 (74%), Gaps = 1/499 (0%)
 Frame = +1

Query: 235  SVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAVCANSPASDMN 414
            +VA F S    L +++ QCST+++LK IH  LIKTGL+ D +AASRVLA C  SP SDMN
Sbjct: 12   TVAAFPSPASYLRLIDTQCSTMRELKQIHGNLIKTGLISDTVAASRVLAFCCASP-SDMN 70

Query: 415  YAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSS-SWSPGRLTYPSVFKA 591
            YAYLVF  I + N F WNTIIRGFS+SS PE+AIS+F  ML SS S  P  LTYPSVFKA
Sbjct: 71   YAYLVFTRINHKNPFVWNTIIRGFSQSSFPEMAISIFIDMLCSSPSVKPQNLTYPSVFKA 130

Query: 592  YTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEEDEVLDVVAW 771
            Y +LG A +G QLHGRV+K+GLE D FIRNT+L MY + G L EA ++F      DVVAW
Sbjct: 131  YGRLGQAIDGRQLHGRVLKEGLEDDSFIRNTMLQMYVTSGCLVEAWRIFVGMTDFDVVAW 190

Query: 772  NSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLFDEMQEQRMK 951
            NSMI GLAK G I  +++LFD+M  RN+V+WN+MISG+VRNG  + A ++F EMQE+ +K
Sbjct: 191  NSMIMGLAKCGLISQAQQLFDEMPHRNEVSWNSMISGFVRNGRFKDALEMFREMQERNVK 250

Query: 952  PSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCKCGDIDMACQV 1131
            P  +T+VSLLNA A LGA EQG WIH+YI +   +LN IVITA+I MYCKCG I+   +V
Sbjct: 251  PDGFTMVSLLNACAYLGANEQGRWIHEYIARNRFELNSIVITALIEMYCKCGCIEEGLKV 310

Query: 1132 FENATNKGLSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGVLTACNHSGLV 1311
            FE A  K LSCWNS+I GLANNG  + A+ LF  LE   LEPDSVSF+GVLTAC +SG V
Sbjct: 311  FECAPKKQLSCWNSMILGLANNGCEERAMDLFLELERFGLEPDSVSFIGVLTACAYSGEV 370

Query: 1312 NEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEPDVAIWGSLLS 1491
            ++A  +F+LM+E Y +EPS++HY C+++ LG AG L++AE L K MP+E D  IW SLL+
Sbjct: 371  HKAGGFFRLMREKYMVEPSIKHYTCMVNVLGGAGLLDEAESLIKKMPVEEDAIIWSSLLA 430

Query: 1492 ASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERVSMKDKQIEKQ 1671
            A R++ N+ MAK AAKCL +LDP+E   Y+L+SN YA  G FE+A+ +R+ MK++++EK+
Sbjct: 431  ACRKYSNVEMAKRAAKCLKKLDPDETCGYVLMSNAYAHYGLFEEAVEQRILMKERKMEKE 490

Query: 1672 PGCSSIEVDGEVHEFLASG 1728
             GCSSIEVD EVHEF++ G
Sbjct: 491  VGCSSIEVDFEVHEFVSCG 509


>dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326506700|dbj|BAJ91391.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 520

 Score =  444 bits (1141), Expect = e-121
 Identities = 227/501 (45%), Positives = 320/501 (63%), Gaps = 3/501 (0%)
 Frame = +1

Query: 229  STSVAKFISSQPCLEMLENQCSTIKDLKIIHAQLIKTGLVKDKIAASRVLAVCANSPASD 408
            S S++ F++S P L +L  QC+T+  L+ +HA L+K+GL KD IAASR +A CA     D
Sbjct: 22   SPSISAFLASHPALTLLHTQCATMAHLRQLHAALVKSGLSKDPIAASRAVAFCAGE-GRD 80

Query: 409  MNYAYLVFNHIENPNLFAWNTIIRGFSRSSTPEIAISLFAHMLVSSSWSPGRLTYPSVFK 588
              YA  +  +   PN F WNT IR  S    P+ A++LF  ML S +  P R T+PS+F 
Sbjct: 81   AAYAARIVRYHPRPNSFMWNTAIRALSDGPGPDAAVALFVDMLRSPT-PPERRTFPSLFA 139

Query: 589  AYTQLGLAENGAQLHGRVMKQGLEFDPFIRNTILHMYASCGYLSEARKLFEEDEVLDVVA 768
            AY +LG A++GA LHG V+K GL  D + RNT + MYAS G   EA  LF + +V DVVA
Sbjct: 140  AYARLGRADDGAALHGMVLKLGLAGDAYTRNTTIAMYASSGRADEALALFGQCQVFDVVA 199

Query: 769  WNSMISGLAKHGEIDDSRRLFDKMTCRNDVTWNAMISGYVRNGNPEVAFDLFDEMQEQRM 948
             NS I  L++ G +D++R +FD M  R   TW+AM+S Y R      A DLF  MQ   +
Sbjct: 200  CNSAIVALSRAGRVDEARAVFDGMPSRTVATWSAMVSAYSRAARFHDAVDLFSAMQVDGV 259

Query: 949  KPSEYTVVSLLNASADLGALEQGEWIHDYIKKTNIDLNVIVITAIINMYCKCGDIDMACQ 1128
            +P+   +VS+L   A LGALEQG W+H YI K ++ +N +V+ A+++MYCKCG I  A Q
Sbjct: 260  EPNANVLVSVLGCCASLGALEQGAWVHAYIDKQDVGMNALVVIALVDMYCKCGSIHKARQ 319

Query: 1129 VFENATNKG---LSCWNSLISGLANNGFCKEAIKLFSRLENSNLEPDSVSFLGVLTACNH 1299
            VF+ + ++G   LS WN+++ GLA +G C+EA+ LFS LE+  L PD+V+F+ +L A  H
Sbjct: 320  VFDTSRSQGLAKLSSWNAMMLGLAAHGQCQEALALFSELESYGLRPDNVTFIAMLMAYGH 379

Query: 1300 SGLVNEARNYFKLMKEMYEIEPSVEHYGCLIDALGRAGFLEQAEELTKYMPMEPDVAIWG 1479
            SG+ +EA+  F  M   Y + P +EHYGCL+DAL RAG L +AE+  + MPM+PD AIWG
Sbjct: 380  SGMADEAKALFASMAREYGVTPGIEHYGCLVDALARAGRLREAEDTIRAMPMKPDAAIWG 439

Query: 1480 SLLSASRQHGNIRMAKLAAKCLNQLDPNENSSYLLLSNVYAASGHFEKAIHERVSMKDKQ 1659
            +LLS  R HG+      AA+   + DP ++ +Y+L ++V A  G   + +  R  M+++ 
Sbjct: 440  ALLSGCRLHGDAEAGARAARGAVECDPRDSGAYVLAASVLARDGEVGRGLGVRGKMREEG 499

Query: 1660 IEKQPGCSSIEVDGEVHEFLA 1722
            + K PGCS IEVDG VHEF++
Sbjct: 500  VAKVPGCSMIEVDGVVHEFVS 520