BLASTX nr result

ID: Catharanthus23_contig00003141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00003141
         (612 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352961.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...    97   5e-18
ref|XP_004233115.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...    97   5e-18
ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...    73   7e-11
ref|XP_002316727.1| predicted protein [Populus trichocarpa]            70   5e-10
gb|EOY27724.1| Phospho-N-acetylmuramoyl-pentapeptide-transferase...    60   6e-07
emb|CBI30860.3| unnamed protein product [Vitis vinifera]               58   2e-06

>ref|XP_006352961.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Solanum tuberosum]
          Length = 519

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
 Frame = -1

Query: 363 YGRVSFGFHVQALGFHYDFKVAGKRGGGRYGSCSRQRIFQVDAMDEGSIGVSSI-DWGES 187
           + R+   FH   L  H+  K+  +    RYG C   R+ QV AMD+  +GVSS  DWG++
Sbjct: 37  FQRLLINFHHLRLSSHFPLKIC-RSSARRYGFCLPPRLLQVRAMDD-DVGVSSFHDWGDN 94

Query: 186 DGPIEYIFXXXXXXXXXXDVLLQPITDVDLPTTKENFHPTDDSVTVAAHRFAVLGRAHKR 7
           +G IEY F          D+LLQPITDVDLPT+KE F+  DDSVT    +  +LGRA+KR
Sbjct: 95  NGAIEYRFSSSEGEDSDGDILLQPITDVDLPTSKEQFYSADDSVT--TRQLTMLGRAYKR 152

Query: 6   RK 1
           ++
Sbjct: 153 KR 154


>ref|XP_004233115.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Solanum lycopersicum]
          Length = 518

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 54/122 (44%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
 Frame = -1

Query: 363 YGRVSFGFHVQALGFHYDFKVAGKRGGGRYGSCSRQRIFQVDAMDEGSIGVSSI-DWGES 187
           + R+   FH   L  H+  K+  +    RYG C   R+FQV AMD+  +GVSS  DWG++
Sbjct: 36  FQRLLINFHHLRLSSHFPVKIR-RSSARRYGFCLPPRLFQVRAMDD-DVGVSSFHDWGDN 93

Query: 186 DGPIEYIFXXXXXXXXXXDVLLQPITDVDLPTTKENFHPTDDSVTVAAHRFAVLGRAHKR 7
           +G +EY F          D+LLQPITDVDLPT+KE  +  DD  TV  H+  +LGRA+KR
Sbjct: 94  NGAVEYRFSSSEGEDSDGDILLQPITDVDLPTSKEQLYSADD--TVRTHQLTMLGRAYKR 151

Query: 6   RK 1
           ++
Sbjct: 152 KR 153


>ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Vitis vinifera]
          Length = 545

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 32/92 (34%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = -1

Query: 273 GSCSRQRIFQVDAMDEGSIGVSSID-WGESDGPIEYIFXXXXXXXXXXDVLLQPITDVDL 97
           G  SR+R+ ++ AMDEGS+ +SS+D WG+++G    +           ++++ P++D+DL
Sbjct: 89  GHESRRRLLRIRAMDEGSMDISSLDDWGDNEGIAGNMLPSSDSEDSDGEIIINPVSDIDL 148

Query: 96  PTTKENFHPTDDSVTVAAHRFAVLGRAHKRRK 1
            T+ E    ++D++T+AAHRFA++G+  K+ +
Sbjct: 149 ATSNERLVSSNDALTMAAHRFAMIGKGRKKNR 180


>ref|XP_002316727.1| predicted protein [Populus trichocarpa]
          Length = 189

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = -1

Query: 315 YDFKVAGKRGGGRYGSCSRQRIFQVDAMDEGSIGVSSI--DWGESDGPIEYIFXXXXXXX 142
           ++FK+ G   GGR     R +I QV A DE   GVSS   DW  +DG   Y+        
Sbjct: 69  HNFKLNGSSAGGRR---LRHKIVQVRAFDEDLSGVSSPLDDWANNDGAAGYMLLSSDGED 125

Query: 141 XXXDVLLQPITDVDLPTTKENFHPTDDSVTVAAHRFAVLGRAHKRRK 1
              + ++ P+TD++LPT K +   T+D++T+ AHR A++GRA ++R+
Sbjct: 126 SDGEYIINPVTDMELPTAKVS---TNDALTLTAHRLAMIGRAPRKRR 169


>gb|EOY27724.1| Phospho-N-acetylmuramoyl-pentapeptide-transferase [Theobroma cacao]
          Length = 655

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
 Frame = -1

Query: 264 SRQRIFQVDAMDEGSIGVSSID-WGESDGPIEYIFXXXXXXXXXXD-VLLQPITDVDLPT 91
           SR  + QV+A D+ S G+SS D W   D    Y+F            +LL P+T+VDLP 
Sbjct: 71  SRHDVVQVNATDDDSAGISSFDDWVVDDSVAAYMFSSSSDGEDSDGEILLNPLTEVDLPP 130

Query: 90  TKENFHPTDDSVTVAAHRFAVLGRAHKRRK 1
            + +   TDD++T+  HR A++GR  +R +
Sbjct: 131 VRVS---TDDAITMTTHRLALIGRGQRRHR 157


>emb|CBI30860.3| unnamed protein product [Vitis vinifera]
          Length = 689

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 24/77 (31%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
 Frame = -1

Query: 228 EGSIGVSSID-WGESDGPIEYIFXXXXXXXXXXDVLLQPITDVDLPTTKENFHPTDDSVT 52
           +GS+ +SS+D WG+++G    +           ++++ P++D+DL T+ E    ++D++T
Sbjct: 81  KGSMDISSLDDWGDNEGIAGNMLPSSDSEDSDGEIIINPVSDIDLATSNERLVSSNDALT 140

Query: 51  VAAHRFAVLGRAHKRRK 1
           +AAHRFA++G+  K+ +
Sbjct: 141 MAAHRFAMIGKGRKKNR 157


Top