BLASTX nr result
ID: Catharanthus23_contig00003084
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00003084
(340 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY34116.1| Histone H2A 12 isoform 1 [Theobroma cacao] gi|508... 82 7e-14
gb|EOY07600.1| Histone H2A 12 [Theobroma cacao] 81 2e-13
ref|XP_004487027.1| PREDICTED: probable histone H2A.1-like [Cice... 81 2e-13
ref|XP_003597346.1| Histone H2A [Medicago truncatula] gi|1089360... 81 2e-13
ref|XP_003632610.1| PREDICTED: probable histone H2A.4 isoform 2 ... 81 2e-13
ref|XP_003632202.1| PREDICTED: probable histone H2A.4 isoform 2 ... 81 2e-13
ref|XP_003558215.1| PREDICTED: histone H2A-like [Brachypodium di... 81 2e-13
ref|XP_006429024.1| hypothetical protein CICLE_v10013023mg [Citr... 81 2e-13
gb|AEC10950.1| histone H2A [Camellia sinensis] 81 2e-13
ref|XP_002533104.1| histone h2a, putative [Ricinus communis] gi|... 81 2e-13
ref|XP_002533102.1| histone h2a, putative [Ricinus communis] gi|... 81 2e-13
ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 ... 81 2e-13
ref|XP_002274570.1| PREDICTED: probable histone H2A.4 isoform 1 ... 81 2e-13
gb|EXC35050.1| putative histone H2A.4 [Morus notabilis] 80 2e-13
ref|XP_002308145.1| histone 2 [Populus trichocarpa] 80 2e-13
gb|ACG36457.1| histone H2A [Zea mays] 80 2e-13
gb|ACG24751.1| histone H2A [Zea mays] 80 2e-13
ref|NP_001141182.1| uncharacterized LOC100273269 [Zea mays] gi|1... 80 2e-13
ref|XP_006381182.1| histone H2A family protein [Populus trichoca... 80 2e-13
ref|XP_004984759.1| PREDICTED: histone H2A-like [Setaria italica] 80 4e-13
>gb|EOY34116.1| Histone H2A 12 isoform 1 [Theobroma cacao]
gi|508786861|gb|EOY34117.1| Histone H2A 12 isoform 1
[Theobroma cacao]
Length = 149
Score = 82.0 bits (201), Expect = 7e-14
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS +AGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE
Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 65
>gb|EOY07600.1| Histone H2A 12 [Theobroma cacao]
Length = 153
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS +AGLQFPVGRIGRYLKKGRYSQRVGTGAPVY+AAVLE
Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLE 65
>ref|XP_004487027.1| PREDICTED: probable histone H2A.1-like [Cicer arietinum]
Length = 149
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/42 (90%), Positives = 42/42 (100%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
V+RS+RAGLQFPVGRIGRYLKKGRY+QRVGTGAPVY+AAVLE
Sbjct: 24 VTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLE 65
>ref|XP_003597346.1| Histone H2A [Medicago truncatula]
gi|108936001|sp|Q2HU68.1|H2A1_MEDTR RecName:
Full=Probable histone H2A.1 gi|87240419|gb|ABD32277.1|
Histone H2A; Histone-fold [Medicago truncatula]
gi|355486394|gb|AES67597.1| Histone H2A [Medicago
truncatula] gi|388518347|gb|AFK47235.1| unknown
[Medicago truncatula]
Length = 148
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/42 (90%), Positives = 42/42 (100%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
V+RS+RAGLQFPVGRIGRYLKKGRY+QRVGTGAPVY+AAVLE
Sbjct: 23 VTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLE 64
>ref|XP_003632610.1| PREDICTED: probable histone H2A.4 isoform 2 [Vitis vinifera]
Length = 165
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS +AGLQFPVGRIGRYLKKGRYSQRVGTGAPVY+AAVLE
Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLE 65
>ref|XP_003632202.1| PREDICTED: probable histone H2A.4 isoform 2 [Vitis vinifera]
Length = 167
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS +AGLQFPVGRIGRYLKKGRYSQRVGTGAPVY+AAVLE
Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLE 65
>ref|XP_003558215.1| PREDICTED: histone H2A-like [Brachypodium distachyon]
Length = 161
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
V+RS RAGLQFPVGRIGRYLKKGRY+QRVGTGAPVYMAAVLE
Sbjct: 28 VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLE 69
>ref|XP_006429024.1| hypothetical protein CICLE_v10013023mg [Citrus clementina]
gi|568854273|ref|XP_006480755.1| PREDICTED: histone
H2A-like [Citrus sinensis] gi|337733640|gb|AEI72269.1|
histone H2A [Citrus trifoliata]
gi|557531081|gb|ESR42264.1| hypothetical protein
CICLE_v10013023mg [Citrus clementina]
Length = 150
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS +AGLQFPVGRIGRYLKKGRYSQRVGTGAPVY+AAVLE
Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLE 65
>gb|AEC10950.1| histone H2A [Camellia sinensis]
Length = 151
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS +AGLQFPVGRIGRYLKKGRY+QRVGTGAPVYMAAVLE
Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLE 65
>ref|XP_002533104.1| histone h2a, putative [Ricinus communis]
gi|223527095|gb|EEF29276.1| histone h2a, putative
[Ricinus communis]
Length = 150
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
V+RS RAGLQFPVGRIGRYLKKGRY+QRVGTGAPVYMAAVLE
Sbjct: 24 VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLE 65
>ref|XP_002533102.1| histone h2a, putative [Ricinus communis]
gi|223527093|gb|EEF29274.1| histone h2a, putative
[Ricinus communis]
Length = 150
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
V+RS RAGLQFPVGRIGRYLKKGRY+QRVGTGAPVYMAAVLE
Sbjct: 24 VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLE 65
>ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 [Vitis vinifera]
gi|147841321|emb|CAN60181.1| hypothetical protein
VITISV_014244 [Vitis vinifera]
gi|297746122|emb|CBI16178.3| unnamed protein product
[Vitis vinifera]
Length = 149
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS +AGLQFPVGRIGRYLKKGRYSQRVGTGAPVY+AAVLE
Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLE 65
>ref|XP_002274570.1| PREDICTED: probable histone H2A.4 isoform 1 [Vitis vinifera]
gi|147769777|emb|CAN63391.1| hypothetical protein
VITISV_009336 [Vitis vinifera]
Length = 149
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS +AGLQFPVGRIGRYLKKGRYSQRVGTGAPVY+AAVLE
Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLE 65
>gb|EXC35050.1| putative histone H2A.4 [Morus notabilis]
Length = 149
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS +AGLQFPVGRIGRYLKKGRYSQR+GTGAPVY+AAVLE
Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRIGTGAPVYLAAVLE 65
>ref|XP_002308145.1| histone 2 [Populus trichocarpa]
Length = 136
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/42 (90%), Positives = 42/42 (100%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS++AGLQFPVGRIGRYLKKGRYSQRVG+GAPVY+AAVLE
Sbjct: 11 VSRSAKAGLQFPVGRIGRYLKKGRYSQRVGSGAPVYLAAVLE 52
>gb|ACG36457.1| histone H2A [Zea mays]
Length = 152
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRSSRAGLQFPV R+GRYLKKGRY+QRVGTGAPVY+AAVLE
Sbjct: 27 VSRSSRAGLQFPVSRVGRYLKKGRYAQRVGTGAPVYLAAVLE 68
>gb|ACG24751.1| histone H2A [Zea mays]
Length = 150
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRSSRAGLQFPV R+GRYLKKGRY+QRVGTGAPVY+AAVLE
Sbjct: 27 VSRSSRAGLQFPVSRVGRYLKKGRYAQRVGTGAPVYLAAVLE 68
>ref|NP_001141182.1| uncharacterized LOC100273269 [Zea mays] gi|194703122|gb|ACF85645.1|
unknown [Zea mays] gi|194708722|gb|ACF88445.1| unknown
[Zea mays] gi|195605664|gb|ACG24662.1| histone H2A [Zea
mays] gi|195606120|gb|ACG24890.1| histone H2A [Zea mays]
gi|195619448|gb|ACG31554.1| histone H2A [Zea mays]
gi|195620268|gb|ACG31964.1| histone H2A [Zea mays]
gi|195625358|gb|ACG34509.1| histone H2A [Zea mays]
gi|195626390|gb|ACG35025.1| histone H2A [Zea mays]
gi|195629410|gb|ACG36346.1| histone H2A [Zea mays]
gi|195636162|gb|ACG37549.1| histone H2A [Zea mays]
gi|413932406|gb|AFW66957.1| histone H2A [Zea mays]
Length = 150
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRSSRAGLQFPV R+GRYLKKGRY+QRVGTGAPVY+AAVLE
Sbjct: 27 VSRSSRAGLQFPVSRVGRYLKKGRYAQRVGTGAPVYLAAVLE 68
>ref|XP_006381182.1| histone H2A family protein [Populus trichocarpa]
gi|118485435|gb|ABK94574.1| unknown [Populus
trichocarpa] gi|550335769|gb|ERP58979.1| histone H2A
family protein [Populus trichocarpa]
Length = 149
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/42 (90%), Positives = 42/42 (100%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS++AGLQFPVGRIGRYLKKGRYSQRVG+GAPVY+AAVLE
Sbjct: 24 VSRSAKAGLQFPVGRIGRYLKKGRYSQRVGSGAPVYLAAVLE 65
>ref|XP_004984759.1| PREDICTED: histone H2A-like [Setaria italica]
Length = 159
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = -1
Query: 127 VSRSSRAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYMAAVLE 2
VSRS +AGLQFPVGRIGRYLKKGRY+QRVGTGAPVY+AAVLE
Sbjct: 29 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLE 70