BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00002331
         (3319 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   248   2e-70
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   248   2e-70
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   248   2e-70
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   240   6e-70
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   244   1e-67
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   221   2e-67
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...   248   4e-67
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...   243   3e-66
emb|CAN79492.1| hypothetical protein VITISV_033373 [Vitis vinifera]   208   4e-66
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...   233   3e-65
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   247   2e-62
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   241   5e-62
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   245   8e-62
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]   244   2e-61
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   243   3e-61
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   241   2e-60
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   239   4e-60
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380...   239   4e-60
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]   234   2e-58
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]   233   3e-58

>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  248 bits (633), Expect(2) = 2e-70
 Identities = 142/298 (47%), Positives = 177/298 (59%), Gaps = 9/298 (3%)
 Frame = -3

Query: 1253 PRKKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLL 1074
            P K+ALG KW Y+IK + DG +ERYKARL++LGN Q EG DY ETFA V K    + FL 
Sbjct: 995  PGKRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLG 1054

Query: 1073 QPSARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCW 894
              +AR     +   H +  HGDL EEVYMKLP GF       VC L KSLYGL+QAPRCW
Sbjct: 1055 VAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCW 1114

Query: 893  FSKLSTALSQYGFKHLYANYSLFTYAFHGILC-VLIYVDDLIITEKDSSAISHFKLHLSR 717
            FSKLS+AL QYGF    ++YSLF+Y   GI   VL+YVDDLII+     A++ FK +L  
Sbjct: 1115 FSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVHVLVYVDDLIISGSCPDAVAQFKSYLES 1174

Query: 716  CFHLKDLGPLNIFSVLRSPEMLPVSTSVRANMLWTSFTKQVYP--------GLNLPSLQL 561
            CFH+KDLG L  F        L +  S  A   + S  K V          G    +  L
Sbjct: 1175 CFHMKDLGLLKYF--------LGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPL 1226

Query: 560  SKIYTLATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
             + + L+      + + + YR LVG L+YL +TRP+L+YSV+ LAQFMQ PR  HW A
Sbjct: 1227 EQNHKLSLSTSPLLSDSSRYRRLVGRLIYLVVTRPELSYSVHTLAQFMQNPRQDHWNA 1284



 Score = 48.1 bits (113), Expect(2) = 2e-70
 Identities = 22/52 (42%), Positives = 34/52 (65%)
 Frame = -2

Query: 1404 ANHRSFHAVVQGEIEPTTFFEAITHEKRRHAMQQEIDALETNGTWILANLPP 1249
            ++H++F A V   +EPTT+ EA+  +  R AM  EI++L  N T+ + NLPP
Sbjct: 944  SSHKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPP 995



 Score =  137 bits (344), Expect = 4e-29
 Identities = 88/214 (41%), Positives = 115/214 (53%), Gaps = 2/214 (0%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEV+RNA   YLSQ KY LDII E GL GA+P+  P+EQN         + +  
Sbjct: 1184 LKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDS 1243

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   + +                      ++ VV YLKS PG G  L+
Sbjct: 1244 SRYRRLVGRLIYLVVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLS 1303

Query: 330  S-SNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKLN-TIPA 157
            S S L ++ +CD+D  +CPLT RS T YFV LG++PISWKTKKQPTVS+S  +      A
Sbjct: 1304 STSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAMA 1363

Query: 156  ITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
                EL WL ++L DL V H   + ++ DS+ +I
Sbjct: 1364 FLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAI 1397



 Score = 64.7 bits (156), Expect(2) = 8e-17
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
 Frame = -3

Query: 2183 CENVMELTKWREKEKLLQFLFGLDTAIFRMIRSSILGEDPLPNINQAYSKVMQEEQVKNM 2004
            C    +  K+RE + + Q+L+GL+   F  IRSS+    PLP + + Y+ V QEE + N 
Sbjct: 175  CNLGTDQEKYREDDMVHQYLYGLNETKFHTIRSSLTSRVPLPGLEEVYNIVRQEEDMVNN 234

Query: 2003 TKG*KKQEQ------RLRLMGKNG*RIFDKLNLIRNV-----CHKSGHESKTCF*VIWSP 1857
                +++        ++R   +     F     ++N      C++ GH  + CF +I  P
Sbjct: 235  RSSNEERTDVTAFAVQMRPRSEVISEKFANSEKLQNKKLCTHCNRGGHSPENCFVLIGYP 294

Query: 1856 EWWIERSKYNAGRGGSGTSKG 1794
            EWW +R +  +   GS TS+G
Sbjct: 295  EWWGDRPRGKSNSNGS-TSRG 314



 Score = 52.0 bits (123), Expect(2) = 8e-17
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
 Frame = -2

Query: 2607 DGLSTLITLVQLKDNNFNERADAIEMVLESKNKLGFLNGSTPKLK------EDELKYN-- 2452
            D    +I+   LK NN+ E A   +  L S+ K GFL+G+ P+        ED L  N  
Sbjct: 27   DNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDWLTINAL 86

Query: 2451 ----VEEN*YVDRFTDIKHH*TTFKVFQSQKRGL*KL*DELLQRFRAVNEPRYYELRAPI 2284
                ++     +  T+I H      +++           ++ +RF   N P+  +++A +
Sbjct: 87   LVSWMKMTIDSELLTNISHRDVARDLWE-----------QIRKRFSVSNGPKNQKMKADL 135

Query: 2283 MSCKQKGMFEATYYAKLKKL*DEL 2212
             +CKQ+GM    YY KL K+ D +
Sbjct: 136  ATCKQEGMTVEGYYGKLNKIWDNI 159


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  248 bits (632), Expect(2) = 2e-70
 Identities = 141/298 (47%), Positives = 177/298 (59%), Gaps = 9/298 (3%)
 Frame = -3

Query: 1253 PRKKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLL 1074
            P K+ALG KW Y+IK + DG +ERYKARL++LGN Q EG DY ETFA V K    + FL 
Sbjct: 636  PGKRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLG 695

Query: 1073 QPSARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCW 894
              +AR     +   H +  HGDL EEVYMKLP GF       VC L KSLYGL+QAPRCW
Sbjct: 696  VAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCW 755

Query: 893  FSKLSTALSQYGFKHLYANYSLFTYAFHGILC-VLIYVDDLIITEKDSSAISHFKLHLSR 717
            FSKLS+AL QYGF    ++YSLF+Y   G+   VL+YVDDLII+     A++ FK +L  
Sbjct: 756  FSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDLIISGSCPDAVAQFKSYLES 815

Query: 716  CFHLKDLGPLNIFSVLRSPEMLPVSTSVRANMLWTSFTKQVYP--------GLNLPSLQL 561
            CFH+KDLG L  F        L +  S  A   + S  K V          G    +  L
Sbjct: 816  CFHMKDLGLLKYF--------LGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPL 867

Query: 560  SKIYTLATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
             + + L+      + + + YR LVG L+YL +TRP+L+YSV+ LAQFMQ PR  HW A
Sbjct: 868  EQNHKLSLSTSPLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNA 925



 Score = 48.1 bits (113), Expect(2) = 2e-70
 Identities = 22/52 (42%), Positives = 34/52 (65%)
 Frame = -2

Query: 1404 ANHRSFHAVVQGEIEPTTFFEAITHEKRRHAMQQEIDALETNGTWILANLPP 1249
            ++H++F A V   +EPTT+ EA+  +  R AM  EI++L  N T+ + NLPP
Sbjct: 585  SSHKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPP 636



 Score =  137 bits (345), Expect = 3e-29
 Identities = 88/214 (41%), Positives = 115/214 (53%), Gaps = 2/214 (0%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEV+RNA   YLSQ KY LDII E GL GA+P+  P+EQN         + +  
Sbjct: 825  LKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDS 884

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   + +                      ++ VV YLKS PG G  L+
Sbjct: 885  SRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLS 944

Query: 330  S-SNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKLN-TIPA 157
            S S L ++ +CD+D  +CPLT RS T YFV LG++PISWKTKKQPTVS+S  +      A
Sbjct: 945  STSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAMA 1004

Query: 156  ITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
                EL WL ++L DL V H   + ++ DS+ +I
Sbjct: 1005 FLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAI 1038


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score =  248 bits (632), Expect(2) = 2e-70
 Identities = 141/298 (47%), Positives = 177/298 (59%), Gaps = 9/298 (3%)
 Frame = -3

Query: 1253 PRKKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLL 1074
            P K+ALG KW Y+IK + DG +ERYKARL++LGN Q EG DY ETFA V K    + FL 
Sbjct: 636  PGKRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLG 695

Query: 1073 QPSARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCW 894
              +AR     +   H +  HGDL EEVYMKLP GF       VC L KSLYGL+QAPRCW
Sbjct: 696  VAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCW 755

Query: 893  FSKLSTALSQYGFKHLYANYSLFTYAFHGILC-VLIYVDDLIITEKDSSAISHFKLHLSR 717
            FSKLS+AL QYGF    ++YSLF+Y   G+   VL+YVDDLII+     A++ FK +L  
Sbjct: 756  FSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDLIISGSCPDAVAQFKSYLES 815

Query: 716  CFHLKDLGPLNIFSVLRSPEMLPVSTSVRANMLWTSFTKQVYP--------GLNLPSLQL 561
            CFH+KDLG L  F        L +  S  A   + S  K V          G    +  L
Sbjct: 816  CFHMKDLGLLKYF--------LGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPL 867

Query: 560  SKIYTLATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
             + + L+      + + + YR LVG L+YL +TRP+L+YSV+ LAQFMQ PR  HW A
Sbjct: 868  EQNHKLSLSTSPLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNA 925



 Score = 48.1 bits (113), Expect(2) = 2e-70
 Identities = 22/52 (42%), Positives = 34/52 (65%)
 Frame = -2

Query: 1404 ANHRSFHAVVQGEIEPTTFFEAITHEKRRHAMQQEIDALETNGTWILANLPP 1249
            ++H++F A V   +EPTT+ EA+  +  R AM  EI++L  N T+ + NLPP
Sbjct: 585  SSHKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPP 636



 Score =  137 bits (344), Expect = 4e-29
 Identities = 87/214 (40%), Positives = 115/214 (53%), Gaps = 2/214 (0%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEV+RNA   YLSQ KY LDII E GL GA+P+  P+EQN         + +  
Sbjct: 825  LKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDS 884

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   + +                      ++ VV YLKS PG G  L+
Sbjct: 885  SRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLS 944

Query: 330  S-SNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKLN-TIPA 157
            S S L ++ +CD+D  +CPLT RS T YFV LG++PISWKTKKQPT+S+S  +      A
Sbjct: 945  STSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTISRSSAEAEYRAMA 1004

Query: 156  ITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
                EL WL ++L DL V H   + ++ DS+ +I
Sbjct: 1005 FLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAI 1038


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  240 bits (613), Expect(3) = 6e-70
 Identities = 142/294 (48%), Positives = 180/294 (61%), Gaps = 5/294 (1%)
 Frame = -3

Query: 1253 PRKKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLL 1074
            P K A+G +W ++ K   DG VERYKARL++ GN QVEGEDY ETFA V +    +  L 
Sbjct: 1028 PGKVAIGSQWVFKTKYNSDGTVERYKARLVVQGNKQVEGEDYKETFAPVVRMTTVRTLLR 1087

Query: 1073 QPSARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCW 894
              +A   +  +   H +  HGDL EEVYMKLP GF  S    VC L+KSLYGL+QAPRCW
Sbjct: 1088 NVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCW 1147

Query: 893  FSKLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSR 717
            F KLS +L ++GF   Y +YSLF+Y  + I L VLIYVDDL+I   D   +  FK +LSR
Sbjct: 1148 FKKLSDSLLRFGFVQSYEDYSLFSYTRNNIELRVLIYVDDLLICGNDGYMLQKFKDYLSR 1207

Query: 716  CFHLKDLGPLNIF---SVLRSPEMLPVSTSVRA-NMLWTSFTKQVYPGLNLPSLQLSKIY 549
            CF +KDLG L  F    V R PE + +S    A +++  S      P        L + +
Sbjct: 1208 CFSMKDLGKLKYFLGIEVSRGPEGIFLSQRKYALDVIADSGNLGSRPA----HTPLEQNH 1263

Query: 548  TLATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
             LA+D G  + +P  YR LVG LLYL  TRP+L+YSV+VLAQFMQ PR  H+ A
Sbjct: 1264 HLASDDGPLLSDPKPYRRLVGRLLYLLHTRPELSYSVHVLAQFMQNPREAHFDA 1317



 Score = 46.2 bits (108), Expect(3) = 6e-70
 Identities = 21/52 (40%), Positives = 32/52 (61%)
 Frame = -2

Query: 1404 ANHRSFHAVVQGEIEPTTFFEAITHEKRRHAMQQEIDALETNGTWILANLPP 1249
            ++HR++ A +   +EP  F EA+  +    AM  E+DALE N TW + +LPP
Sbjct: 977  SSHRAYLAAITDNVEPKHFKEAVQIKVWNDAMFTEVDALEINKTWDIVDLPP 1028



 Score = 29.3 bits (64), Expect(3) = 6e-70
 Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
 Frame = -1

Query: 1558 RITHPAEKLKDFVCYT---TYGNTHSASAS-SVPSKVNGTCPYPLGSY--DAYASS 1409
            R THP  KL D+V Y    T  + H+  A  S  S V G   +PL  Y  DA  SS
Sbjct: 922  RATHPPPKLNDYVLYNAMYTPSSIHALPADPSQSSTVPGKSLFPLTDYVSDAAFSS 977



 Score =  132 bits (332), Expect = 1e-27
 Identities = 83/214 (38%), Positives = 116/214 (54%), Gaps = 2/214 (0%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEV+R    ++LSQ KYALD+I ++G  G++PA TP+EQN +       + +  
Sbjct: 1217 LKYFLGIEVSRGPEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDP 1276

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L + + +                    + +L VV YLK  PG G  LN
Sbjct: 1277 KPYRRLVGRLLYLLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLN 1336

Query: 330  SS-NLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKLN-TIPA 157
            +  +LTL  YCD+D  SCPLT RS + Y V+LG SPISWKTKKQ TVS S  +      +
Sbjct: 1337 ADPDLTLEVYCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMS 1396

Query: 156  ITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
                E+KWL ++L +L +  ++   LY DS+ +I
Sbjct: 1397 YALKEIKWLRKLLKELGIEQSTPARLYCDSKAAI 1430



 Score = 77.4 bits (189), Expect(2) = 1e-21
 Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
 Frame = -3

Query: 2183 CENVMELTKWREKEKLLQFLFGLDTAIFRMIRSSILGEDPLPNINQAYSKVMQEEQVKNM 2004
            C    E TK RE+EK+ QF+ GLD + F  + ++++  DPLP++ + YS+V++EEQ    
Sbjct: 186  CGATSEPTKEREEEKIHQFVLGLDESRFGGLCATLINMDPLPSLGEIYSRVIREEQRLAS 245

Query: 2003 TKG*KKQEQRLRLM----------------------GKNG*RIFDKLNLIRNVCHKSGHE 1890
                +++E+ +  +                      G +      K  +  + C ++GHE
Sbjct: 246  VHVREQKEEAVGFLARREQLDHHSRVDASSSRSEHTGGSRSNSIIKGRVTCSNCGRTGHE 305

Query: 1889 SKTCF*VIWSPEWWIERSKYNAGRGGSGTSKGSHGRN 1779
             K C+ ++  P+WW ER   N GRG +G  +G  G N
Sbjct: 306  KKECWQIVGFPDWWSER---NGGRGSNGRGRGGRGSN 339



 Score = 55.5 bits (132), Expect(2) = 1e-21
 Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
 Frame = -2

Query: 2619 MKKNDGLSTLITLVQLKDNNFNERADAIEMVLESKNKLGFLNGSTPKLKEDELKYN--VE 2446
            +  +D    +I+ V+L  +N+N+ A  +   L++K K GF+NG+ P+   ++  Y     
Sbjct: 34   LASSDNPGAVISSVELNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPPNDPNYENWTA 93

Query: 2445 EN*YVDRF--TDIKHH*TTFKVFQSQKRGL*KL*DELLQRFRAVNEPRYYELRAPIMSCK 2272
             N  +  +  T I+        F S    L K   +L QRF   N+ R +++RA + SC+
Sbjct: 94   VNSMIVGWIRTSIEPKVKATVTFISDAHLLWK---DLKQRFSVGNKVRIHQIRAQLSSCR 150

Query: 2271 QKGMFEATYYAKLKKL*DE 2215
            Q G     YY +L  L +E
Sbjct: 151  QDGQAVIEYYGRLSNLWEE 169


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  244 bits (622), Expect(2) = 1e-67
 Identities = 141/292 (48%), Positives = 181/292 (61%), Gaps = 5/292 (1%)
 Frame = -3

Query: 1247 KKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLLQP 1068
            K A+G +W Y+ K   DG VERYKARL++ GN+Q+EGEDYTETFA V K    +  L   
Sbjct: 1020 KVAIGSQWVYKTKFNADGTVERYKARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLV 1079

Query: 1067 SARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCWFS 888
            +A   +  +   H +  HGDL EEVYMKLP GF  S    VC L+KSLYGL+QAPRCWF 
Sbjct: 1080 AANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFK 1139

Query: 887  KLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSRCF 711
            KLS AL ++GF   Y +YS F+Y+  GI L VL+YVDDLII   D   +  FK +L RCF
Sbjct: 1140 KLSDALKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDDLIICGNDEYMVQKFKEYLGRCF 1199

Query: 710  HLKDLGPLNIF---SVLRSPEMLPVSTSVRA-NMLWTSFTKQVYPGLNLPSLQLSKIYTL 543
             +KDLG L  F    V R P+ + +S    A +++  S T    P        L + + L
Sbjct: 1200 SMKDLGKLKYFLGIEVSRGPDGIFLSQRKYALDIISDSGTLGARPAYT----PLEQNHHL 1255

Query: 542  ATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
            A+D G  + +P  +R LVG LLYL  TRP+L+YSV+VL+QFMQ PR  H +A
Sbjct: 1256 ASDDGPLLQDPKPFRRLVGRLLYLLHTRPELSYSVHVLSQFMQAPREAHLEA 1307



 Score = 43.1 bits (100), Expect(2) = 1e-67
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = -2

Query: 1404 ANHRSFHAVVQGEIEPTTFFEAITHEKRRHAMQQEIDALETNGTWILANLP 1252
            A H+ F A +    EP  F EA+  +    AM +E+DALE N TW + +LP
Sbjct: 967  AGHKVFLAAITANDEPKHFKEAVKVKVWNDAMYKEVDALEVNKTWDIVDLP 1017



 Score =  139 bits (349), Expect = 1e-29
 Identities = 86/214 (40%), Positives = 120/214 (56%), Gaps = 2/214 (0%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEV+R    ++LSQ KYALDII ++G  GA+PA TP+EQN +       +    
Sbjct: 1207 LKYFLGIEVSRGPDGIFLSQRKYALDIISDSGTLGARPAYTPLEQNHHLASDDGPLLQDP 1266

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L + + +             A     LE ++ +V YLK  PG G  L+
Sbjct: 1267 KPFRRLVGRLLYLLHTRPELSYSVHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLS 1326

Query: 330  SS-NLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKLN-TIPA 157
            S+ +LTL  YCD+D  SCPLT RS + Y V+LG SPISWKTKKQ TVS S  +      +
Sbjct: 1327 SNKDLTLEVYCDSDFQSCPLTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMS 1386

Query: 156  ITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
            +   E+KWL+++L +L +  A+   L+ DS+ +I
Sbjct: 1387 VALKEIKWLNKLLKELGITLAAPTRLFCDSKAAI 1420



 Score = 79.3 bits (194), Expect(2) = 9e-21
 Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
 Frame = -3

Query: 2207 IVKRSVYNCENVMELTKWREKEKLLQFLFGLDTAIFRMIRSSILGEDPLPNINQAYSKVM 2028
            + K  +  C   +E +K RE+EK+ QF+ GLD + F  + ++++  DP P++ + YS+V+
Sbjct: 173  VCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVV 232

Query: 2027 QEEQVKNMTKG*KKQEQRLRLMGKNG*RIFD-----------KLNLIRNVCHKSGHESKT 1881
            +EEQ     +  ++Q+  +  + +      D             +++ + C +SGHE K 
Sbjct: 233  REEQRLASVQIREQQQSAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKD 292

Query: 1880 CF*VIWSPEWWIERS------KYNAGRGGSGTSKGSHGRNR 1776
            C+ ++  P+WW ER+        + GRGG  +   + GR R
Sbjct: 293  CWQIVGFPDWWTERTNGGGRGSSSRGRGGRSSGSNNSGRGR 333



 Score = 50.8 bits (120), Expect(2) = 9e-21
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
 Frame = -2

Query: 2619 MKKNDGLSTLITLVQLKDNNFNERADAIEMVLESKNKLGFLNGSTPKLKEDELKYNVEE- 2443
            +  +D    +I+ V L  +N+NE +  +   L++K K GF+NGS  K   D   Y   + 
Sbjct: 29   LASSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKTGFINGSISKPPLDNPDYENWQA 88

Query: 2442 -N*YVDRF--TDIKHH*TTFKVFQSQKRGL*KL*DELLQRFRAVNEPRYYELRAPIMSCK 2272
             N  +  +    I+    +   F S      +L  EL QRF   N+ R ++++A + +C+
Sbjct: 89   VNSMIVGWIRASIEPKVKSTVTFISDAH---QLWSELKQRFSVGNKVRVHQIKAQLAACR 145

Query: 2271 QKGMFEATYYAKLKKL*DE 2215
            Q G     YY +L KL +E
Sbjct: 146  QDGQPVIDYYGRLCKLWEE 164


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  221 bits (564), Expect(3) = 2e-67
 Identities = 131/296 (44%), Positives = 175/296 (59%), Gaps = 5/296 (1%)
 Frame = -3

Query: 1253 PRKKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLL 1074
            P KKA+GCKW Y+IK   DG +ERYKARL+  G  Q+EG DY E F+ V K    + FL 
Sbjct: 843  PEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLA 902

Query: 1073 QPSARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCW 894
               A+  +  +   + +  HGDL EEVYMKLP GF ++G + VC L+KSLYGL+QA R W
Sbjct: 903  VXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 962

Query: 893  FSKLSTALSQYGFKHLYANYSLFTYAFHGILC-VLIYVDDLIITEKDSSAISHFKLHLSR 717
            F+KL+TAL +YGF+   A+YSLFTY    I+  +L+YVDDLI+   D+     FK  L R
Sbjct: 963  FAKLTTALKEYGFQQSLADYSLFTYRRGNIVMNLLVYVDDLILAGNDNKVCEAFKNFLDR 1022

Query: 716  CFHLKDLGPLNI---FSVLRSPEMLPVSTSVRANMLWTSFTKQV-YPGLNLPSLQLSKIY 549
             F +K+LG L       V R  + L +S    A     +  K+    G       + + +
Sbjct: 1023 KFGIKNLGQLKYILGIEVARGKDGLFLSQRKYA----LNIIKECGLLGARPVEFPMEENH 1078

Query: 548  TLATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKAVF 381
             LA   G  + +P  YR LVG L+YLT+TRP L Y V+VL+QFMQ PR +H  A +
Sbjct: 1079 KLALANGRLLNDPGMYRRLVGRLIYLTVTRPDLTYXVHVLSQFMQSPREEHLDAAY 1134



 Score = 55.8 bits (133), Expect(3) = 2e-67
 Identities = 26/54 (48%), Positives = 37/54 (68%)
 Frame = -2

Query: 1398 HRSFHAVVQGEIEPTTFFEAITHEKRRHAMQQEIDALETNGTWILANLPPEESS 1237
            HR+F A +  E EP T+ EA+   + R AM +EI+ALETN TW + +LPPE+ +
Sbjct: 794  HRAFLAXINIEKEPRTYKEAVXDNRWREAMAKEIEALETNQTWKVVDLPPEKKA 847



 Score = 30.0 bits (66), Expect(3) = 2e-67
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 1534 LKDFVCYTTYGNTHSASASSVPSKVNGTCPYPLGSYDAY 1418
            L+D++CY+    +   S +S   KV    PYP+ +Y  Y
Sbjct: 749  LQDYICYSARSLSTLCSKASSIQKVPSGKPYPIANYVTY 787



 Score =  114 bits (285), Expect = 3e-22
 Identities = 80/214 (37%), Positives = 107/214 (50%), Gaps = 2/214 (0%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKY LGIEVAR    L+LSQ KYAL+II E GL GA+P   P+E+N         +    
Sbjct: 1032 LKYILGIEVARGKDGLFLSQRKYALNIIKECGLLGARPVEFPMEENHKLALANGRLLNDP 1091

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   +               +     L+ +  VV YLK  PG G  L 
Sbjct: 1092 GMYRRLVGRLIYLTVTRPDLTYXVHVLSQFMQSPREEHLDAAYRVVRYLKKGPGQGIVLK 1151

Query: 330  SSN-LTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKLNTIP-A 157
            + N L L  Y D+D  SCPLT RS +   V LG SPISW+ KKQ T+S+S  ++     A
Sbjct: 1152 ADNDLQLYCYSDSDWXSCPLTRRSISGCCVKLGTSPISWRCKKQGTISRSSAEVEYXSMA 1211

Query: 156  ITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
            +  +EL WL  +L+ L VLH   + LY D++ ++
Sbjct: 1212 MAASELTWLKSLLASLGVLHDKPMKLYCDNKAAL 1245



 Score = 72.4 bits (176), Expect(2) = 2e-17
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
 Frame = -3

Query: 2213 SQIVKRSVYNCENVMELTKWREKEKLLQFLFGLDTAIFRMIRSSILGEDPLPNINQAYSK 2034
            +Q ++     C     + K RE EK  QFL GLD   F  +RSSIL  DPLP + + Y+ 
Sbjct: 49   NQYIEIPECTCGAAQAIVKSREDEKAHQFLMGLDDTTFGTVRSSILALDPLPTLGKIYAM 108

Query: 2033 VMQEEQVKNMTKG*KKQEQRLRLMGKNG*RIFDKLNLIRNV--CHKSGHESKTCF*VIWS 1860
            V QEE+ ++M +G  + E  + +      +   + N   +   C K+GH+   CF +   
Sbjct: 109  VTQEERHRSMARGADRAE--ITVFAAXTEKPGGQTNKSGSCTHCGKTGHDVADCFQLKGY 166

Query: 1859 PEWWIERSKYNAGRG-GSGTSKGSH 1788
            P+WW  R     GRG G G  + S+
Sbjct: 167  PDWWPTR---QMGRGRGRGRGRNSY 188



 Score = 46.6 bits (109), Expect(2) = 2e-17
 Identities = 21/46 (45%), Positives = 33/46 (71%)
 Frame = -2

Query: 2349 DELLQRFRAVNEPRYYELRAPIMSCKQKGMFEATYYAKLKKL*DEL 2212
            ++L +R+   N PR ++LR+ I++ KQ+GM  A YYAK+K + DEL
Sbjct: 3    EDLKERYAVGNAPRVHQLRSEIVNLKQEGMTVAAYYAKIKGMWDEL 48


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score =  248 bits (634), Expect(2) = 4e-67
 Identities = 138/293 (47%), Positives = 187/293 (63%), Gaps = 4/293 (1%)
 Frame = -3

Query: 1253 PRKKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLL 1074
            P KKALGCKW +R+K K DG +ER+KARL++LGN+Q EG DYTETFA V K V  + FL 
Sbjct: 1013 PGKKALGCKWVFRLKYKSDGTLERHKARLVVLGNNQTEGLDYTETFAPVAKMVTVRAFLQ 1072

Query: 1073 QPSARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCW 894
            Q  +   +  +   H +  HGDL EEVYM+ P GF +     VC L+KSLYGL+QAPRCW
Sbjct: 1073 QVVSLDWEVHQMDVHNAFLHGDLDEEVYMQFPPGFRTGDKTKVCRLRKSLYGLKQAPRCW 1132

Query: 893  FSKLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSR 717
            F+KL++AL  YGF    ++YSLF +  +G+ L VL+YVDDLIIT    + I+ FK +LS 
Sbjct: 1133 FAKLTSALKNYGFIQDISDYSLFIFHKNGVRLHVLVYVDDLIITGTTIAVITEFKHYLSS 1192

Query: 716  CFHLKDLGPLNIF---SVLRSPEMLPVSTSVRANMLWTSFTKQVYPGLNLPSLQLSKIYT 546
            CF++KDLG L  F    V RSPE + +     A  +    T+    G+   S  L + + 
Sbjct: 1193 CFYMKDLGILRYFLGIEVARSPEGIYLCQRKYALDI---ITETGLLGVKPASFPLDQNHK 1249

Query: 545  LATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
            LA   G  + +P  YR LVG ++YL  TRP+L+Y +++L+QFM  P+  HW+A
Sbjct: 1250 LAFATGETIDDPLRYRRLVGRIIYLATTRPELSYVIHILSQFMHNPKPAHWEA 1302



 Score = 36.6 bits (83), Expect(2) = 4e-67
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = -2

Query: 1401 NHRSFHAVVQGEIEPTTFFEAITHEKRRHAMQQEIDALETNGTWILANLPP 1249
            N++++   +    EP  + EA+  +  + A+  EI +LE  GTW + +LPP
Sbjct: 963  NYQAYILAITSGNEPRNYNEAMLDDHWKGAVSHEIGSLENLGTWTVEDLPP 1013



 Score =  119 bits (299), Expect = 7e-24
 Identities = 85/220 (38%), Positives = 118/220 (53%), Gaps = 8/220 (3%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            L+YFLGIEVAR+   +YL Q KYALDII ETGL G KPA  P++QN       +  +A  
Sbjct: 1202 LRYFLGIEVARSPEGIYLCQRKYALDIITETGLLGVKPASFPLDQNH------KLAFATG 1255

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAAT-----PSPA-LEGSLLVV*YLKSCPG 349
                        +      A    + S  +H  +     P PA  E +L VV YLKS PG
Sbjct: 1256 ETIDDPLRYRRLVGRIIYLATTRPELSYVIHILSQFMHNPKPAHWEAALRVVRYLKSSPG 1315

Query: 348  *GFFLNSSN-LTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKL 172
             G  L ++  L LS +CD+D  +CP + RS T +F+ LG SP+SWKT+KQ  VS+S  + 
Sbjct: 1316 QGILLRANTPLVLSAWCDSDFGACPHSDRSLTGWFIQLGGSPLSWKTQKQNVVSRSSAEA 1375

Query: 171  N-TIPAITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
                 A T +E+ W+ ++L  L +   +   L+ DS  +I
Sbjct: 1376 EYRAMAETVSEIIWIRELLPALGIPCTAPTTLHSDSLSAI 1415



 Score = 70.9 bits (172), Expect(2) = 1e-17
 Identities = 42/136 (30%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
 Frame = -3

Query: 2168 ELTKWREKEKLLQFLFGLDTAIFRMIRSSILGEDPLPNINQAYSKVMQEEQVKNMTKG*K 1989
            ++ K RE++KL QFL GLD +++  ++S++L   PLP++ +AY+ + Q+E+ K++++   
Sbjct: 174  DVRKEREEDKLHQFLMGLDESVYGAVKSALLSRVPLPSLEEAYNALTQDEESKSLSRLHN 233

Query: 1988 KQEQRLRLMGKNG*RIFDKL-NLIRNVCHKSGHESKTCF*VIWSPEWWIERSKY----NA 1824
            ++   +    +   R  D   N + + C + GH ++ CF +I  P W  E+ +     ++
Sbjct: 234  ERVDGVSFAVQTTSRPRDSSENRVCSNCGRVGHLAEQCFKLIGYPPWLEEKLRLKNTASS 293

Query: 1823 GRGGSGTSKG--SHGR 1782
             RGG  + KG  SHGR
Sbjct: 294  SRGGLSSFKGKQSHGR 309



 Score = 48.9 bits (115), Expect(2) = 1e-17
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
 Frame = -2

Query: 2619 MKKNDGLSTLITLVQLKDNNFNERADAIEMVLESKNKLGFLNGSTPKLKEDELKYN--VE 2446
            +   D   TLI+   L+  N++E A  + + L+++ K GF +GS P+  E +  +     
Sbjct: 27   LTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGSIPQPVETDPDFEDWTA 86

Query: 2445 EN*YVDRFTDIKHH*TTFKVFQSQKRGL*KL*DELLQRFRAVNEPRYYELRAPIMSCKQK 2266
             N  V  +  +     T     S      +L   + +RF   N  R   L+  + +C+QK
Sbjct: 87   NNALVVSWMKLTID-ETVSTSMSHLDDSHELWTHIQKRFGVKNGQRVQRLKTELATCRQK 145

Query: 2265 GMFEATYYAKLKKL*DELAN 2206
            G+   TYY +L +L   LA+
Sbjct: 146  GVAIETYYGRLSQLWRSLAD 165


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score =  243 bits (620), Expect(2) = 3e-66
 Identities = 138/294 (46%), Positives = 189/294 (64%), Gaps = 5/294 (1%)
 Frame = -3

Query: 1253 PRKKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLL 1074
            P KKALGCKW +R+K K DG +ER+KARL++LGN Q EG DY+ETFA V K V  + FL 
Sbjct: 975  PGKKALGCKWVFRLKYKSDGTLERHKARLVVLGNKQTEGIDYSETFAPVAKMVTVRAFLQ 1034

Query: 1073 QPSARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCW 894
            Q ++   +  +   H +  HGDL EEVY+K P GF S     VC L+K+LYGL+QAPRCW
Sbjct: 1035 QVASLDWEVHQMDVHNAFLHGDLDEEVYIKFPPGFGSDDNRKVCRLRKALYGLKQAPRCW 1094

Query: 893  FSKLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSR 717
            F+KL+TAL+ YGF    ++YSLFT   +GI L +L+YVDDLIIT      I+ FK +LS 
Sbjct: 1095 FAKLTTALNDYGFIQDISDYSLFTMERNGIRLHILVYVDDLIITGSSLDVITKFKGYLSS 1154

Query: 716  CFHLKDLGPLNIF---SVLRSPEMLPVSTSVRA-NMLWTSFTKQVYPGLNLPSLQLSKIY 549
            CF++KDLG L  F    V RSP  + +     A +++  +    V+P     S  L + +
Sbjct: 1155 CFYMKDLGILRYFLGIEVARSPAGIYLCQRKYAIDIITETGLLGVWPA----SHPLEQNH 1210

Query: 548  TLATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
             LA   G  + +P+ YR LVG L+YL  TRP+L+Y++++L+QFM  P+  H +A
Sbjct: 1211 KLALAFGDTISDPSRYRRLVGRLIYLGTTRPELSYAIHMLSQFMSDPKADHMEA 1264



 Score = 39.3 bits (90), Expect(2) = 3e-66
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = -2

Query: 1404 ANHRSFHAVVQGEIEPTTFFEAITHEKRRHAMQQEIDALETNGTWILANLPP 1249
            A ++++   +   IEP ++ EAI  E  R A+  EI +LE  GTW + +LPP
Sbjct: 924  AAYQAYVFAISLGIEPKSYKEAILDENWRCAVSDEIVSLENLGTWTVEDLPP 975



 Score =  121 bits (304), Expect = 2e-24
 Identities = 84/214 (39%), Positives = 110/214 (51%), Gaps = 2/214 (0%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            L+YFLGIEVAR+ + +YL Q KYA+DII ETGL G  PA  P+EQN           +  
Sbjct: 1164 LRYFLGIEVARSPAGIYLCQRKYAIDIITETGLLGVWPASHPLEQNHKLALAFGDTISDP 1223

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   + +            +   +  +E +L VV YLKS PG G  L 
Sbjct: 1224 SRYRRLVGRLIYLGTTRPELSYAIHMLSQFMSDPKADHMEAALRVVRYLKSSPGQGILLR 1283

Query: 330  SSN-LTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKLN-TIPA 157
            S+  L L+ +CD+   SCP+T RS T +F+ LG SPISWKTKK   VS+S  +      A
Sbjct: 1284 SNTPLVLTGWCDSGFDSCPITQRSLTGWFIQLGGSPISWKTKKHDVVSRSSAEAEYRAMA 1343

Query: 156  ITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
             T +EL WL  +L  L +     I LY DS  +I
Sbjct: 1344 DTVSELLWLRALLPALGISCNEPIMLYSDSLSAI 1377



 Score = 53.9 bits (128), Expect(2) = 1e-12
 Identities = 22/57 (38%), Positives = 43/57 (75%)
 Frame = -3

Query: 2168 ELTKWREKEKLLQFLFGLDTAIFRMIRSSILGEDPLPNINQAYSKVMQEEQVKNMTK 1998
            E+ K RE++KL QFL GLD +++  ++S++L   PLP++ +AY+ + Q+E+ K++++
Sbjct: 173  EVRKEREEDKLHQFLMGLDESMYGAVKSALLSRVPLPSLEEAYNTLTQDEESKSLSR 229



 Score = 48.9 bits (115), Expect(2) = 1e-12
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
 Frame = -2

Query: 2619 MKKNDGLSTLITLVQLKDNNFNERADAIEMVLESKNKLGFLNGSTPKLKEDELKYN--VE 2446
            +   D   TLI+   L+  N++E A  + + L+++ K GF +G+ P+  E    ++  + 
Sbjct: 26   LTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGTIPQPDETNPDFDDWIA 85

Query: 2445 EN*YVDRFTDIKHH*TTFKVFQSQKRGL*KL*DELLQRFRAVNEPRYYELRAPIMSCKQK 2266
             N  V  +  +  H  +     S       +   + +RF   N  R   L+  + +C+QK
Sbjct: 86   NNALVVSWMKLTIH-ESLATSMSHLDDSHDMWTHIQKRFGVKNGQRIQRLKTELATCRQK 144

Query: 2265 GMFEATYYAKLKKL*DELAN 2206
            G    TYY KL +L   LA+
Sbjct: 145  GTPIETYYGKLSQLWRSLAD 164


>emb|CAN79492.1| hypothetical protein VITISV_033373 [Vitis vinifera]
          Length = 2116

 Score =  208 bits (529), Expect(3) = 4e-66
 Identities = 119/289 (41%), Positives = 171/289 (59%), Gaps = 4/289 (1%)
 Frame = -3

Query: 1238 LGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLLQPSAR 1059
            LGCKW Y +K++ DG ++RYKARL+ LGN+Q  G +Y ETFA V K    +  L   ++ 
Sbjct: 1676 LGCKWVYSVKVRSDGSLDRYKARLVALGNNQEYGVNYEETFAPVAKMTTVRTILALAASS 1735

Query: 1058 VGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCWFSKLS 879
                 +     +  HGDL E +YMK P G   S T HVC L++SLYGL+QAPR WF K  
Sbjct: 1736 DWPLHQMNVKNAFLHGDLKECIYMKPPPGLFPSPTSHVCKLRRSLYGLKQAPRAWFDKFR 1795

Query: 878  TALSQYGFKHLYANYSLFTY-AFHGILCVLIYVDDLIITEKDSSAISHFKLHLSRCFHLK 702
            T L Q+ F+    + SLF + +  GI+ +L+YVDD++IT  DS+ +   K HLS  FH+K
Sbjct: 1796 TTLLQFSFRQSKYDTSLFLWKSDMGIVVLLVYVDDIVITGSDSALLGQLKTHLSESFHMK 1855

Query: 701  DLGPLNIF---SVLRSPEMLPVSTSVRANMLWTSFTKQVYPGLNLPSLQLSKIYTLATDK 531
            DLG L  F    V  SP  + ++    A+ L  +   Q    ++ P ++L+       ++
Sbjct: 1856 DLGSLTYFLGLEVHHSPSGISLNQHKYASDLVATAGLQGATSVDTP-MELN--VKFRKEE 1912

Query: 530  GLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKAV 384
            G  + NP+ YR LVG L+YLTITRP ++++V  ++QF+Q PR  H  AV
Sbjct: 1913 GDLLANPSLYRKLVGSLVYLTITRPDISFAVQQVSQFLQTPRHLHLAAV 1961



 Score = 56.2 bits (134), Expect(3) = 4e-66
 Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
 Frame = -2

Query: 339  FLNSSNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKLN-TI 163
            ++  ++  L+ Y DAD   C  T RS T + V LG++ ISWK+KKQ  VSKS  +     
Sbjct: 1967 YVQGNSTRLAAYSDADWAGCADTRRSITGWCVFLGDALISWKSKKQDRVSKSSTESEYRA 2026

Query: 162  PAITCNELKWLHQMLSDLQVLHASLIPLYYD 70
             ++ C+E+ WL  +L+D   +  +  P+Y++
Sbjct: 2027 MSLACSEIIWLRGLLAD--AIQITTNPVYHE 2055



 Score = 38.5 bits (88), Expect(3) = 4e-66
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -2

Query: 1359 PTTFFEAITHEKRRHAMQQEIDALETNGTWILANLPP 1249
            PT +  A  H+  R AMQ+EI ALE N TW +   PP
Sbjct: 1635 PTCYSHAAKHDCWRQAMQEEIAALEANHTWDIEPCPP 1671


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score =  233 bits (594), Expect(2) = 3e-65
 Identities = 139/294 (47%), Positives = 177/294 (60%), Gaps = 5/294 (1%)
 Frame = -3

Query: 1253 PRKKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLL 1074
            P K A+G +W Y+ K   DG +ERYKARL++ GN QVEGEDY ETFA V K    +  L 
Sbjct: 675  PGKVAIGSQWVYKTKYNADGSIERYKARLVVQGNKQVEGEDYNETFAPVVKMTTVRTLLR 734

Query: 1073 QPSARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCW 894
              +A   +  +   + +  HGDL EEVYMKLP GF  S    VC L+KSLYGL+QAPRCW
Sbjct: 735  LVAANQWEVYQMDVNNAFLHGDLDEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCW 794

Query: 893  FSKLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSR 717
            F KLS AL ++GF   + +YS F+Y  +GI L VL+YVDDL+I   D   +  FK +L R
Sbjct: 795  FKKLSDALLRFGFVQGHEDYSFFSYTRNGIELRVLVYVDDLLICGNDGYMLQKFKEYLGR 854

Query: 716  CFHLKDLGPLNIF---SVLRSPEMLPVSTSVRA-NMLWTSFTKQVYPGLNLPSLQLSKIY 549
            CF +KDLG L  F    V R  E + +S    A +++  S      P L      L + +
Sbjct: 855  CFSMKDLGKLKYFLGIEVSRGSEGIFLSQRKYALDIITDSGNLGCRPALT----PLEQNH 910

Query: 548  TLATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
             LATD G  + +   YR LVG LLYL  TRP+L+YSV+VL+QFMQ PR  H  A
Sbjct: 911  HLATDDGPLLADAKPYRRLVGRLLYLLHTRPELSYSVHVLSQFMQTPREAHLAA 964



 Score = 45.8 bits (107), Expect(2) = 3e-65
 Identities = 22/52 (42%), Positives = 31/52 (59%)
 Frame = -2

Query: 1404 ANHRSFHAVVQGEIEPTTFFEAITHEKRRHAMQQEIDALETNGTWILANLPP 1249
            A H++F A +    EP  F EA+  +    AM +E+DALE N TW + +LPP
Sbjct: 624  AGHKAFLAAITANDEPKHFKEAVRIKVWNDAMFKEVDALEINKTWDIVDLPP 675



 Score =  124 bits (311), Expect = 3e-25
 Identities = 81/202 (40%), Positives = 113/202 (55%), Gaps = 8/202 (3%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEV+R +  ++LSQ KYALDII ++G  G +PA+TP+EQN +       + A  
Sbjct: 864  LKYFLGIEVSRGSEGIFLSQRKYALDIITDSGNLGCRPALTPLEQNHHLATDDGPLLADA 923

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAA-----TPSPA-LEGSLLVV*YLKSCPG 349
                        L + + +       S +VH       TP  A L  ++ +V +LK  PG
Sbjct: 924  KPYRRLVGRLLYLLHTRPEL------SYSVHVLSQFMQTPREAHLAAAMRIVRFLKGSPG 977

Query: 348  *GFFLNS-SNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKL 172
             G  LN+ + L L  YCD+D  +CP T RS + Y V+LG SPISWKTKKQ TVS S  + 
Sbjct: 978  QGILLNADTELQLDVYCDSDFQTCPKTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEA 1037

Query: 171  N-TIPAITCNELKWLHQMLSDL 109
                 ++   E+KWL ++L +L
Sbjct: 1038 EYRAMSVALREIKWLRKLLKEL 1059


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  247 bits (631), Expect = 2e-62
 Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 1/288 (0%)
 Frame = -3

Query: 1247 KKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLLQP 1068
            K+ALG +W YR K   +G +ER K+RL++LGNHQ  G DY ETF+ V K    + FL   
Sbjct: 990  KRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIA 1049

Query: 1067 SARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCWFS 888
            +++  +  +   H +  HGDL EEVYMKLP GF SS  + VC L+KSLYGL+QAPRCWF+
Sbjct: 1050 ASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESSDPNLVCRLRKSLYGLKQAPRCWFA 1109

Query: 887  KLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSRCF 711
            KL TAL  YGF   Y+NYSLFTY    + + VL+YVDDLII+  DS+A+  FK +L+ CF
Sbjct: 1110 KLVTALKGYGFLQSYSNYSLFTYTKGNVQINVLVYVDDLIISRNDSAALKTFKAYLNDCF 1169

Query: 710  HLKDLGPLNIFSVLRSPEMLPVSTSVRANMLWTSFTKQVYPGLNLPSLQLSKIYTLATDK 531
             +KDLG L  F  +            +        ++    G       + + + L    
Sbjct: 1170 KMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSETGLLGAKPCGFPIEQNHRLGLAN 1229

Query: 530  GLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
            G  + NP SYR LVG L+YL +TRP LAYSV++++QFMQ PR++HW+A
Sbjct: 1230 GELLSNPESYRRLVGRLIYLAVTRPDLAYSVHIISQFMQEPRIEHWEA 1277



 Score =  112 bits (281), Expect = 8e-22
 Identities = 81/215 (37%), Positives = 108/215 (50%), Gaps = 3/215 (1%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEVAR+++ L+L Q KY LDI+ ETGL GAKP   P+EQN   G     + +  
Sbjct: 1177 LKYFLGIEVARSSAGLFLCQRKYTLDIVSETGLLGAKPCGFPIEQNHRLGLANGELLSNP 1236

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   +                      E +L VV YLK  PG G  L 
Sbjct: 1237 ESYRRLVGRLIYLAVTRPDLAYSVHIISQFMQEPRIEHWEAALRVVRYLKGTPGQGVLLR 1296

Query: 330  S-SNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKS--QLKLNTIP 160
            + S+L+L  +CD+D  +CP+T RS +            W TKKQ TVS+S  + +   + 
Sbjct: 1297 ADSDLSLQGWCDSDWAACPVTRRSLS-----------GWLTKKQHTVSRSSAEAEYRAMA 1345

Query: 159  AITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
            A+TC ELKWL  +L  L V H   I L+ DSQ ++
Sbjct: 1346 AVTC-ELKWLKGLLLSLGVHHPKAIKLFCDSQSAL 1379



 Score = 63.2 bits (152), Expect(2) = 1e-15
 Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 22/148 (14%)
 Frame = -3

Query: 2153 REKEKLLQFLFGLDTAIFRMIRSSILGEDPLPNINQAYSKVMQEEQV---KNMTKG*KKQ 1983
            RE+ KL  FL GL+T ++  +R++IL +DPLP++++AY  V+Q+++V   K +T+    +
Sbjct: 185  REQGKLHDFLMGLNTDLYAQLRTNILSQDPLPSLDRAYQLVIQDKRVRLAKAVTEDKPAE 244

Query: 1982 EQRLRLMGKNG*RIFDKLNLIRNVCHKSGHESKT-------------------CF*VIWS 1860
                 +    G         + + C K+GHE+ T                   C+ ++  
Sbjct: 245  VLGFAVRTGAGRGRGKTERPVCSHCKKTGHETSTCWSLVACPHCHKHGHDKNNCYEIVGY 304

Query: 1859 PEWWIERSKYNAGRGGSGTSKGSHGRNR 1776
            PE W++++K +   GG+G S+   GR R
Sbjct: 305  PEGWLDQNKAD---GGAGRSRQQAGRGR 329



 Score = 49.7 bits (117), Expect(2) = 1e-15
 Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
 Frame = -2

Query: 2589 ITLVQLKDNNFNERADAIEMVLE-SKNKLGFLNGST--PKLKEDELKYNVEEN*YVDRFT 2419
            IT  +L+ +N+++ A  I++ L  S+ K  FL G+   P+    +  +N      V   T
Sbjct: 33   ITPTRLRGDNYDDWASDIQLALAGSRRKFEFLEGTITGPQPPYTQSDWNTVNAMLVSWIT 92

Query: 2418 -----DIKHH*TTFKVFQSQKRGL*KL*DELLQRFRAVNEPRYYELRAPIMSCKQ-KGMF 2257
                 ++K   +T   F+  KR    L + L QR+  VN PR  +L+  I  C+Q K M 
Sbjct: 93   NTIDPEVK---STLSKFRDAKR----LWEHLKQRYAMVNGPRIQQLKTSIAKCEQSKSMS 145

Query: 2256 EATYYAKLKKL*DELANCETL 2194
              TYY KL  L +EL   E L
Sbjct: 146  VTTYYGKLNVLWEELFKHEPL 166


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  241 bits (615), Expect(2) = 5e-62
 Identities = 132/290 (45%), Positives = 173/290 (59%), Gaps = 1/290 (0%)
 Frame = -3

Query: 1253 PRKKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLL 1074
            P K+A+G +W Y++K   DG VERYKARL+ LGN Q EGEDY ETFA V K    + FL 
Sbjct: 860  PGKRAIGSQWVYKVKHNSDGSVERYKARLVALGNKQKEGEDYGETFAPVAKMATVRLFLD 919

Query: 1073 QPSARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCW 894
                R  +  +   H +  HGDL EEVYMKLP GF +S  + VC L+K+LYGL+QAPRCW
Sbjct: 920  VAVKRNWEIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNKVCRLRKALYGLKQAPRCW 979

Query: 893  FSKLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSR 717
            F KL+TAL +YGF+   A+YSLFT     + + +LIYVDDLIIT     A   FK +L+ 
Sbjct: 980  FEKLTTALKRYGFQQSLADYSLFTLVKGSVRIKILIYVDDLIITGNSQRATQQFKEYLAS 1039

Query: 716  CFHLKDLGPLNIFSVLRSPEMLPVSTSVRANMLWTSFTKQVYPGLNLPSLQLSKIYTLAT 537
            CFH+KDLGPL  F  +            +        ++    G+   +  L + + L  
Sbjct: 1040 CFHMKDLGPLKYFLGIEVARSTTGIYICQRKYALDIISETGLLGVKPANFPLEQNHKLGL 1099

Query: 536  DKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
                 + +P  YR LVG L+YL +TR  LA+SV++LA+FMQ PR  HW A
Sbjct: 1100 STSPLLTDPQRYRRLVGRLIYLAVTRLDLAFSVHILARFMQEPREDHWAA 1149



 Score = 26.9 bits (58), Expect(2) = 5e-62
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 1317 HAMQQEIDALETNGTWILANLPP 1249
            H     IDA E N TW + +LPP
Sbjct: 838  HTTYVAIDAQEENHTWTIEDLPP 860



 Score =  127 bits (318), Expect = 4e-26
 Identities = 85/215 (39%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
 Frame = -2

Query: 693  PLKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAX 514
            PLKYFLGIEVAR+ + +Y+ Q KYALDII ETGL G KPA  P+EQN   G     +   
Sbjct: 1048 PLKYFLGIEVARSTTGIYICQRKYALDIISETGLLGVKPANFPLEQNHKLGLSTSPLLTD 1107

Query: 513  XXXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFL 334
                         L   +                        +L VV YLK+ PG G FL
Sbjct: 1108 PQRYRRLVGRLIYLAVTRLDLAFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFL 1167

Query: 333  N-SSNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKLN-TIP 160
              S +  ++ +CD+D    P++ RS T YFV  G+SPISWKTKKQ TVSKS  +      
Sbjct: 1168 RRSGDFQITGWCDSDWAGDPMSRRSVTGYFVQFGDSPISWKTKKQDTVSKSSAEAEYRAM 1227

Query: 159  AITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
            +   +EL WL Q+L  L V H   + +  DS+ +I
Sbjct: 1228 SFLASELLWLKQLLFSLGVSHVQPMIMCCDSKSAI 1262



 Score = 71.6 bits (174), Expect = 2e-09
 Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 12/138 (8%)
 Frame = -3

Query: 2159 KWREKEKLLQFLFGLDTAIFRMIRSSILGEDPLPNINQAYSKVMQEEQ-VKNMTKG*KKQ 1983
            K RE++K+ +FL GLD A+FR +RSS++   P+  + + Y+ V QEE  ++N       Q
Sbjct: 90   KDREEDKVHEFLSGLDDALFRTVRSSLVSRIPVQPLEEVYNIVRQEEDLLRNGANVLDDQ 149

Query: 1982 EQRLRLMGKNG*RIF-------DKLNLIRNVCHKSGHESKTCF*VIWSPEWWIE----RS 1836
             +      +   +++       DK +++   C++SGH S++C+ VI  PEWW +    RS
Sbjct: 150  REVNAFAAQMRPKLYQGRGDEKDK-SMVCKHCNRSGHASESCYAVIGYPEWWGDRPRSRS 208

Query: 1835 KYNAGRGGSGTSKGSHGR 1782
                GRGG+ +S G  GR
Sbjct: 209  LQTRGRGGTNSS-GGRGR 225


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  245 bits (626), Expect = 8e-62
 Identities = 132/288 (45%), Positives = 177/288 (61%), Gaps = 1/288 (0%)
 Frame = -3

Query: 1247 KKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLLQP 1068
            K+ALG +W YR K   +G +ER K+RL++LGNHQ  G DY ETF+ V K  + + FL   
Sbjct: 628  KRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTMVRAFLAIA 687

Query: 1067 SARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCWFS 888
            +++  +  +   H +  HGDL EEVYMKLP GF  S  + VC L+KSLYGL+QAPRCWFS
Sbjct: 688  ASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFS 747

Query: 887  KLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSRCF 711
            KL TAL  YGF   Y++YSLFTY    + + VL+YVDDLII+  DS+A+  FK +LS CF
Sbjct: 748  KLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDDLIISGNDSAALKTFKAYLSDCF 807

Query: 710  HLKDLGPLNIFSVLRSPEMLPVSTSVRANMLWTSFTKQVYPGLNLPSLQLSKIYTLATDK 531
             +KDLG L  F  +            +        ++    G       + + + L    
Sbjct: 808  KMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLAN 867

Query: 530  GLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
            G  + NP SYR LVG L+YL +TRP LAYSV++L+QFM  PR++HW+A
Sbjct: 868  GELLSNPESYRRLVGRLIYLAVTRPDLAYSVHILSQFMHEPRIEHWEA 915



 Score =  134 bits (336), Expect = 3e-28
 Identities = 88/215 (40%), Positives = 116/215 (53%), Gaps = 3/215 (1%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEVAR+++ L+L Q KY LDI+ E GL GAKP   P+EQN   G     + +  
Sbjct: 815  LKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLANGELLSNP 874

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   +                      E +L VV YLK  PG G  L 
Sbjct: 875  ESYRRLVGRLIYLAVTRPDLAYSVHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGILLR 934

Query: 330  S-SNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKS--QLKLNTIP 160
            + S+L+L  +CD+D  +CP+T RS + + V LG SPISWKTKKQ TVS+S  + +   + 
Sbjct: 935  ADSDLSLQGWCDSDWAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMA 994

Query: 159  AITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
            A+TC ELKWL  +L  L V H   I L+ DSQ ++
Sbjct: 995  AVTC-ELKWLKGLLLSLGVHHPKAIKLFCDSQSAL 1028


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score =  244 bits (622), Expect = 2e-61
 Identities = 132/287 (45%), Positives = 176/287 (61%), Gaps = 1/287 (0%)
 Frame = -3

Query: 1247 KKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLLQP 1068
            K+ALG +W YR K   +G +ER K+RL++LGNHQ  G DY ETF+ V K    + FL   
Sbjct: 658  KRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIA 717

Query: 1067 SARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCWFS 888
            +++  +  +   H +  HGDL EEVYMKLP GF SS  + VC L KSLYGL+QAPRCWF+
Sbjct: 718  ASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESSDPNLVCRLWKSLYGLKQAPRCWFA 777

Query: 887  KLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSRCF 711
            KL TAL  YGF   Y++YSLFTY    + + VL+YVDDLII+  DS+A+  FK +LS CF
Sbjct: 778  KLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLIISGNDSAALKTFKAYLSDCF 837

Query: 710  HLKDLGPLNIFSVLRSPEMLPVSTSVRANMLWTSFTKQVYPGLNLPSLQLSKIYTLATDK 531
             +KDLG L  F  +            +        ++    G       + + + L    
Sbjct: 838  KMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFSIEQNHRLGLAN 897

Query: 530  GLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWK 390
            G  + NP SYR LVG L+YL +TRP LAYSV++L+QFMQ PR++HW+
Sbjct: 898  GELLSNPESYRRLVGRLIYLAVTRPNLAYSVHILSQFMQEPRIEHWE 944



 Score =  126 bits (317), Expect = 6e-26
 Identities = 86/215 (40%), Positives = 114/215 (53%), Gaps = 3/215 (1%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEVAR+++ L+L Q KY LDI+ E GL GAKP    +EQN   G     + +  
Sbjct: 845  LKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFSIEQNHRLGLANGELLSNP 904

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   +                      E +L VV YLK  PG G  L 
Sbjct: 905  ESYRRLVGRLIYLAVTRPNLAYSVHILSQFMQEPRIEHWEVALRVVHYLKGTPGQGILLR 964

Query: 330  S-SNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKS--QLKLNTIP 160
            + S+L+L  +CD+D  +CP+T RS + + V LG S ISWKTKKQ TVS+S  + +   + 
Sbjct: 965  ADSDLSLQGWCDSDWAACPVTRRSLSGWLVFLGQSHISWKTKKQHTVSRSSAEAEYRAMA 1024

Query: 159  AITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
            A+TC ELKWL  +L  L V H   I L+ DSQ ++
Sbjct: 1025 AVTC-ELKWLKGLLLSLGVHHPKAIKLFCDSQSAL 1058


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  243 bits (621), Expect = 3e-61
 Identities = 132/288 (45%), Positives = 176/288 (61%), Gaps = 1/288 (0%)
 Frame = -3

Query: 1247 KKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLLQP 1068
            K+ALG +W YR K   +G +ER K+RL++LGNHQ  G DY ETF+ V K    + FL   
Sbjct: 707  KRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIA 766

Query: 1067 SARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCWFS 888
            +++  +  +   H +  HGDL EEVYMKLP GF  S  + VC L+KSLYGL+QAPRCWFS
Sbjct: 767  ASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFS 826

Query: 887  KLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSRCF 711
            KL TAL  YGF   Y++YSLFTY    + + VL+YVDDLII+  DS+A+  FK +LS CF
Sbjct: 827  KLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDDLIISGNDSAALKTFKAYLSDCF 886

Query: 710  HLKDLGPLNIFSVLRSPEMLPVSTSVRANMLWTSFTKQVYPGLNLPSLQLSKIYTLATDK 531
             +KDLG L  F  +            +        ++    G       + + + L    
Sbjct: 887  KMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLXLAN 946

Query: 530  GLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
            G  + NP SYR LVG L+YL +TRP LAYSV++L+QFM  PR++HW+A
Sbjct: 947  GELLSNPESYRRLVGRLIYLAVTRPDLAYSVHILSQFMXEPRIEHWEA 994



 Score =  132 bits (333), Expect = 8e-28
 Identities = 92/221 (41%), Positives = 122/221 (55%), Gaps = 9/221 (4%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEVAR+++ L+L Q KY LDI+ E GL GAKP   P+EQN       R   A  
Sbjct: 894  LKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNH------RLXLANG 947

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATP---SPALE---GSLLVV*YLKSCPG 349
                        +      A      + +VH  +     P +E    +L VV YLK  PG
Sbjct: 948  ELLSNPESYRRLVGRLIYLAVTRPDLAYSVHILSQFMXEPRIEHWEAALRVVRYLKGTPG 1007

Query: 348  *GFFLNS-SNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKS--QL 178
             G  L + S+L+L  +CD+D  +CP+T RS + + V LG SPISWKTKKQ TVS+S  + 
Sbjct: 1008 QGILLRADSDLSLQGWCDSDWAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEA 1067

Query: 177  KLNTIPAITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
            +   + A+TC ELKWL  +L  L V H   I L+ DSQ ++
Sbjct: 1068 EYRAMAAVTC-ELKWLKGLLLSLGVHHPKAIKLFCDSQSAL 1107


>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  241 bits (614), Expect = 2e-60
 Identities = 131/288 (45%), Positives = 176/288 (61%), Gaps = 1/288 (0%)
 Frame = -3

Query: 1247 KKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLLQP 1068
            K+ALG +W YR K   +G +ER K+RL++LGNHQ  G DY ETF+ V K    + FL   
Sbjct: 990  KRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRTFLAIA 1049

Query: 1067 SARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCWFS 888
            +++  +  +   H +  HGDL EEVYMKLP GF  S  + VC L+KSLYGL+QAPRCWF+
Sbjct: 1050 ASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFA 1109

Query: 887  KLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSRCF 711
            KL TAL  YGF   Y++YSLFTY    + + VL+YVDDLII+  DS+A+  FK +LS CF
Sbjct: 1110 KLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLIISGNDSAALKTFKAYLSDCF 1169

Query: 710  HLKDLGPLNIFSVLRSPEMLPVSTSVRANMLWTSFTKQVYPGLNLPSLQLSKIYTLATDK 531
             +KDLG L  F  +            +        ++    G       + + + L    
Sbjct: 1170 KMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLAN 1229

Query: 530  GLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
            G  + N  SYR LVG L+YL +TRP LAYSV++L+QFMQ PR++HW+A
Sbjct: 1230 GELLSNLESYRRLVGRLIYLAVTRPDLAYSVHILSQFMQEPRIEHWEA 1277



 Score =  133 bits (334), Expect = 6e-28
 Identities = 87/215 (40%), Positives = 116/215 (53%), Gaps = 3/215 (1%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEVAR+++ L+L Q KY LDI+ E GL GAKP   P+EQN   G     + +  
Sbjct: 1177 LKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLANGELLSNL 1236

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   +                      E +L VV YLK  PG G  L 
Sbjct: 1237 ESYRRLVGRLIYLAVTRPDLAYSVHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLR 1296

Query: 330  S-SNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKS--QLKLNTIP 160
            + S+L+L  +CD+D  +CP+T RS + + V LG SPISWKTKKQ TVS+S  + +   + 
Sbjct: 1297 ADSDLSLQGWCDSDWAACPVTKRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMA 1356

Query: 159  AITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
            A+TC ELKWL  +L  L + H   I L+ DSQ ++
Sbjct: 1357 AVTC-ELKWLKGLLLSLGMHHPKAIKLFCDSQSAL 1390


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  239 bits (611), Expect = 4e-60
 Identities = 134/292 (45%), Positives = 177/292 (60%), Gaps = 5/292 (1%)
 Frame = -3

Query: 1247 KKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLLQP 1068
            KKA+  KW Y++K   DG +ER+KARL+++GNHQ EG D+ ETFA V K    +  L   
Sbjct: 1025 KKAISSKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVA 1084

Query: 1067 SARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCWFS 888
            +A+  +  +   H +  HGDL EEVYM+LP GF  S    VC L+KSLYGL+QAPRCWFS
Sbjct: 1085 AAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFS 1144

Query: 887  KLSTALSQYGFKHLYANYSLFTYA-FHGILCVLIYVDDLIITEKDSSAISHFKLHLSRCF 711
            KLSTAL   GF   Y +YSLF+      I+ VL+YVDDLI+   +  AI  FK  L +CF
Sbjct: 1145 KLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVAGNNLDAIDRFKSQLHKCF 1204

Query: 710  HLKDLGPLNIF---SVLRSPEMLPVSTSVRANMLWTSFTKQV-YPGLNLPSLQLSKIYTL 543
            H+KDLG L  F    V R P+   +S    A        K+    G    ++ ++  + L
Sbjct: 1205 HMKDLGKLKYFLGLEVSRGPDGFCLSQRKYA----LDIVKETGLLGCKPSAVPIALNHKL 1260

Query: 542  ATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
            A+  G    NP  YR LVG  +YLTITRP L+Y+V++L+QFMQ P + HW+A
Sbjct: 1261 ASITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEA 1312



 Score =  132 bits (331), Expect = 1e-27
 Identities = 87/214 (40%), Positives = 111/214 (51%), Gaps = 2/214 (0%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLG+EV+R      LSQ KYALDI+ ETGL G KP+  P+  N         ++   
Sbjct: 1212 LKYFLGLEVSRGPDGFCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNP 1271

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   +               A      E +L +V YLK  P  G FL 
Sbjct: 1272 EQYRRLVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLR 1331

Query: 330  S-SNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKLN-TIPA 157
            S S+L ++ YCD+D  +CPLT RS + Y V LG+SPISWKTKKQ TVS S  +      A
Sbjct: 1332 SDSSLIINAYCDSDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMA 1391

Query: 156  ITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
             T  ELKWL  +L DL V H+S + L+ DS+ +I
Sbjct: 1392 YTLKELKWLKALLKDLGVHHSSPMKLHCDSEAAI 1425



 Score = 80.1 bits (196), Expect(2) = 1e-22
 Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
 Frame = -3

Query: 2183 CENVMELTKWREKEKLLQFLFGLDTAIFRMIRSSILGEDPLPNINQAYSKVMQEEQVKNM 2004
            CE   ++ K RE +++ +FL GLD+  F  IRSSI   +PLP++ Q YS+V++EEQ  N 
Sbjct: 170  CEAASDIEKEREDDRVHKFLLGLDSR-FSSIRSSITDIEPLPDLYQVYSRVVREEQNLNA 228

Query: 2003 --TKG*KKQEQ-RLRLMGKNG*RIFDKLNLIRNVCHKSGHESKTCF*VIWSPEWWIERSK 1833
              TK   K E     +      R  DK  L    C++ GHE   CF V   P+WW+E++ 
Sbjct: 229  SRTKDVVKTEAIGFSVQSSTTPRFRDKSTLFCTHCNRKGHEVTQCFLVHGYPDWWLEQNP 288

Query: 1832 Y-----NAGRGGSGT-SKGSHGRNRN 1773
                    GRG +G  S    G NR+
Sbjct: 289  QENQPSTRGRGSNGRGSSSGRGGNRS 314



 Score = 56.2 bits (134), Expect(2) = 1e-22
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
 Frame = -2

Query: 2622 MMKKNDGLSTLITLVQLKDNNFNERADAIEMVLESKNKLGFLNGSTPKLKED-ELKYNVE 2446
            ++  +D    LI+ V LK+NN+ E ++ ++  L +K KLGF++GS PK   D EL   + 
Sbjct: 23   LINASDNPGALISSVVLKENNYAEWSEELQNFLRAKQKLGFIDGSIPKPAADPELSLWIA 82

Query: 2445 EN*YVDRF--TDIKHH*TTFKVFQSQKRGL*KL*DELLQRFRAVNEPRYYELRAPIMSCK 2272
             N  +  +  T I     +   F S+     +L + L +RF   N  R   L+  I +C 
Sbjct: 83   INSMIVGWIRTSIDPTIRSTVGFVSEAS---QLWENLRRRFSVGNGVRKTLLKDEIAACT 139

Query: 2271 QKGMFEATYYAKLKKL*DELAN 2206
            Q G     YY +L KL +EL N
Sbjct: 140  QDGQPVLAYYGRLIKLWEELQN 161


>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
            At2g23330 [Arabidopsis thaliana]
            gi|110742535|dbj|BAE99183.1| putative retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 776

 Score =  239 bits (611), Expect = 4e-60
 Identities = 134/292 (45%), Positives = 177/292 (60%), Gaps = 5/292 (1%)
 Frame = -3

Query: 1247 KKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLLQP 1068
            KKA+  KW Y++K   DG +ER+KARL+++GNHQ EG D+ ETFA V K    +  L   
Sbjct: 305  KKAISSKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVA 364

Query: 1067 SARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCWFS 888
            +A+  +  +   H +  HGDL EEVYM+LP GF  S    VC L+KSLYGL+QAPRCWFS
Sbjct: 365  AAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFS 424

Query: 887  KLSTALSQYGFKHLYANYSLFTYA-FHGILCVLIYVDDLIITEKDSSAISHFKLHLSRCF 711
            KLSTAL   GF   Y +YSLF+      I+ VL+YVDDLI+   +  AI  FK  L +CF
Sbjct: 425  KLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVAGNNLDAIDRFKSQLHKCF 484

Query: 710  HLKDLGPLNIF---SVLRSPEMLPVSTSVRANMLWTSFTKQV-YPGLNLPSLQLSKIYTL 543
            H+KDLG L  F    V R P+   +S    A        K+    G    ++ ++  + L
Sbjct: 485  HMKDLGKLKYFLGLEVSRGPDGFCLSQRKYA----LDIVKETGLLGCKPSAVPIALNHKL 540

Query: 542  ATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
            A+  G    NP  YR LVG  +YLTITRP L+Y+V++L+QFMQ P + HW+A
Sbjct: 541  ASITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEA 592



 Score =  132 bits (331), Expect = 1e-27
 Identities = 87/214 (40%), Positives = 111/214 (51%), Gaps = 2/214 (0%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLG+EV+R      LSQ KYALDI+ ETGL G KP+  P+  N         ++   
Sbjct: 492  LKYFLGLEVSRGPDGFCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNP 551

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   +               A      E +L +V YLK  P  G FL 
Sbjct: 552  EQYRRLVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLR 611

Query: 330  S-SNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKSQLKLN-TIPA 157
            S S+L ++ YCD+D  +CPLT RS + Y V LG+SPISWKTKKQ TVS S  +      A
Sbjct: 612  SDSSLIINAYCDSDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMA 671

Query: 156  ITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
             T  ELKWL  +L DL V H+S + L+ DS+ +I
Sbjct: 672  YTLKELKWLKALLKDLGVHHSSPMKLHCDSEAAI 705


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score =  234 bits (597), Expect = 2e-58
 Identities = 128/288 (44%), Positives = 172/288 (59%), Gaps = 1/288 (0%)
 Frame = -3

Query: 1247 KKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLLQP 1068
            K ALG +W YR K   +G +ER K RL++LGNHQ    DY ETF+ + K    + FL   
Sbjct: 834  KCALGSQWVYRTKYFSNGDIERLKYRLVVLGNHQEADIDYHETFSPIAKMTTVRAFLAIA 893

Query: 1067 SARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCWFS 888
            +++  +  +   H +  HGDL EEVYMKLP GF S   + VC L+KSLYGL+QAPRCWF+
Sbjct: 894  ASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESXDPNLVCRLRKSLYGLKQAPRCWFA 953

Query: 887  KLSTALSQYGFKHLYANYSLFTYAFHGI-LCVLIYVDDLIITEKDSSAISHFKLHLSRCF 711
            KL T L  YGF   Y++YSLFTY    + + VL+YVDDLII+  DS+A+  FK +LS CF
Sbjct: 954  KLVTXLKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLIISGNDSAALKTFKAYLSDCF 1013

Query: 710  HLKDLGPLNIFSVLRSPEMLPVSTSVRANMLWTSFTKQVYPGLNLPSLQLSKIYTLATDK 531
             +K+LG L  F  +            +        ++    G       + + + L    
Sbjct: 1014 KMKBLGVLKYFLGIEVARSSAGLFLCQXKYTLDIVSEXGLLGAKPCGFXIEQNHRLGLAN 1073

Query: 530  GLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWKA 387
            G  + NP SYR LVG L+YL +TRP LAYSV+ L+QFMQ PR++HW+A
Sbjct: 1074 GELLSNPESYRRLVGRLIYLAVTRPDLAYSVHXLSQFMQEPRIEHWEA 1121



 Score =  102 bits (254), Expect = 1e-18
 Identities = 68/170 (40%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
 Frame = -2

Query: 690  LKYFLGIEVARNASRLYLSQSKYALDIIYETGLSGAKPAITPVEQNLYSGYR*RSMYAXX 511
            LKYFLGIEVAR+++ L+L Q KY LDI+ E GL GAKP    +EQN   G     + +  
Sbjct: 1021 LKYFLGIEVARSSAGLFLCQXKYTLDIVSEXGLLGAKPCGFXIEQNHRLGLANGELLSNP 1080

Query: 510  XXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPALEGSLLVV*YLKSCPG*GFFLN 331
                        L   +                      E +L V  YLK   G G  L 
Sbjct: 1081 ESYRRLVGRLIYLAVTRPDLAYSVHXLSQFMQEPRIEHWEAALRVXRYLKGTXGQGILLR 1140

Query: 330  -SSNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKS 184
              S+L+L  +CD+D  +CP+T RS + + V LG SPISWKTKKQ TVS+S
Sbjct: 1141 XDSDLSLQGWCDSDWAACPVTXRSLSGWLVFLGQSPISWKTKKQHTVSRS 1190



 Score = 65.9 bits (159), Expect(2) = 4e-14
 Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 25/151 (16%)
 Frame = -3

Query: 2153 REKEKLLQFLFGLDTAIFRMIRSSILGEDPLPNINQAYSKVMQEEQVK------------ 2010
            RE+ KL  FL GL+T ++  + ++IL +DPLP++++AY  V+Q+E+V+            
Sbjct: 100  REQGKLHDFLMGLNTDLYAQLXTNILSQDPLPSLDRAYQLVIQDERVRLAKAVTEDKPAE 159

Query: 2009 --------NMTKG*KKQEQRLRLMGKNG*RIFDKLNLIRNV-----CHKSGHESKTCF*V 1869
                     +  G  K E   RL+  +  +   + +   +      CHK GH+   C+ +
Sbjct: 160  VLGFAVRTGVGXGRGKTE---RLVCXHXKKTGHETSTCWSXVACPHCHKHGHDKNNCYEI 216

Query: 1868 IWSPEWWIERSKYNAGRGGSGTSKGSHGRNR 1776
            +  PE W++++K +   GG+G S+   GR R
Sbjct: 217  VGYPEGWLDQNKAD---GGAGRSRQQAGRGR 244



 Score = 42.0 bits (97), Expect(2) = 4e-14
 Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = -2

Query: 2400 TTFKVFQSQKRGL*KL*DELLQRFRAVNEPRYYELRAPIMSCKQ-KGMFEATYYAKLKKL 2224
            +T   F+  KR    L + L QR+  VN PR  +L+  I  C+Q K M   TYY KL  L
Sbjct: 16   STLSKFRDAKR----LWEHLKQRYAMVNGPRIQQLKTSIAKCEQSKSMSVTTYYGKLNVL 71

Query: 2223 *DELANCETL 2194
             +EL   E L
Sbjct: 72   WEELFKHEPL 81


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score =  233 bits (595), Expect = 3e-58
 Identities = 133/293 (45%), Positives = 176/293 (60%), Gaps = 7/293 (2%)
 Frame = -3

Query: 1247 KKALGCKWAYRIKLKYDGIVERYKARLIILGNHQVEGEDYTETFALVTKPVLFKPFLLQP 1068
            KKA+G KW Y+IK   DG +ER K RL+ILGN +VEG DY ETFA   K V  + FL   
Sbjct: 731  KKAIGSKWVYKIKYNSDGSIERCKTRLVILGNKKVEGIDYNETFAPTAKMVTVQTFLAVV 790

Query: 1067 SARVGKFTRWTQHFSPRHGDLAEEVYMKLPLGFHSSGTHHVCLLKKSLYGLRQAPRCWFS 888
            + +  +  +   H +  HG+L EEVYM++  GF S     VC L+KSLYGL+QAP+CWF+
Sbjct: 791  AMKGWELHQMDVHNAFLHGELDEEVYMQMSPGFASPTPGKVCGLRKSLYGLQQAPKCWFA 850

Query: 887  KLSTALSQYGFKHLYANYSLFTY-AFHGILCVLIYVDDLIITEKDSSAISHFKLHLSRCF 711
            KL  AL+ YGFK  Y +YSLFTY A H  L VL+YVDDLII+  D + +  FK +LSRCF
Sbjct: 851  KLVAALTSYGFKQSYLDYSLFTYEAQHIQLNVLVYVDDLIISRNDGTTVQQFKDYLSRCF 910

Query: 710  HLKDLGPLNIFSVLRSPEMLPVSTSVRANML-WTSFTKQVYP-----GLNLPSLQLSKIY 549
            H+KDLG L    +    E+    T+     L    +T  +       G       L + +
Sbjct: 911  HIKDLGKLKFLGI----EVARNDTNSDGIFLCQRKYTLDIISEVGLLGAKSAGTPLEQNH 966

Query: 548  TLATDKGLCMPNPASYRCLVGCLLYLTITRPKLAYSVNVLAQFMQPPRLQHWK 390
             LA      + +P  YR LVG L+YL IT+P+L+Y V++LAQFMQ P  +HW+
Sbjct: 967  KLALVANFDLRDPRQYRRLVGWLIYLMITQPELSYCVHMLAQFMQQPNDEHWE 1019



 Score =  111 bits (277), Expect = 2e-21
 Identities = 90/221 (40%), Positives = 112/221 (50%), Gaps = 12/221 (5%)
 Frame = -2

Query: 681  FLGIEVARNASR---LYLSQSKYALDIIYETGLSGAKPAITPVEQN----LYSGYR*RSM 523
            FLGIEVARN +    ++L Q KY LDII E GL GAK A TP+EQN    L + +  R  
Sbjct: 920  FLGIEVARNDTNSDGIFLCQRKYTLDIISEVGLLGAKSAGTPLEQNHKLALVANFDLRDP 979

Query: 522  YAXXXXXXXXXXXXXXLDYYKAQACLLCKCSCTVHAATPSPA---LEGSLLVV*YLKSCP 352
                              Y       L  C   +      P     E +L VV YLK   
Sbjct: 980  RQYRRLVGWLI-------YLMITQPELSYCVHMLAQFMQQPNDEHWEVALRVVRYLKGNL 1032

Query: 351  G*GFFLNSSNLTLSDYCDAD*TSCPLT*RSPTVYFVVLGNSPISWKTKKQPTVSKS--QL 178
            G G  L +         D D    PLT RS T YF++LGNSPISWKTKKQ TVS+S  + 
Sbjct: 1033 GQGILLRT---------DCDLKFYPLTRRSLTGYFILLGNSPISWKTKKQHTVSRSSDEA 1083

Query: 177  KLNTIPAITCNELKWLHQMLSDLQVLHASLIPLYYDSQVSI 55
            +  ++  ITC ELKWL  +LS L V+H+  + LY DSQ ++
Sbjct: 1084 EYRSMATITC-ELKWLKGLLSTLGVMHSDPMHLYCDSQATL 1123



 Score = 80.9 bits (198), Expect(2) = 4e-21
 Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 10/143 (6%)
 Frame = -3

Query: 2183 CENVMELTKWREKEKLLQFLFGLDTAIFRMIRSSILGEDPLPNINQAYSKVMQEEQVKNM 2004
            C+   +L K RE+E++ QFL GLD   +  +RS+IL  +PL N+N+ Y+ ++Q+E+V+ M
Sbjct: 126  CKITTQLEKKREEERVHQFLMGLDEDGYGTVRSNILSIEPLSNLNRVYAMIVQQERVRTM 185

Query: 2003 TKG*KKQEQ------RLRLMGKNG*RIFDKLNLIRNVCHKSGHESKTCF*VIWSPEWWIE 1842
            T+   K+E+       +++ G+N         +I + C + GHE  +CF  I  PEWW +
Sbjct: 186  TR--TKEERGSPMSFAVQVGGRNPGGDGKDKTVICSNCKRKGHEVDSCFQRIAYPEWWGD 243

Query: 1841 RSKYN----AGRGGSGTSKGSHG 1785
            R +      +G  G G  +G+ G
Sbjct: 244  RPRTTTSGCSGGHGRGVQQGTGG 266



 Score = 50.4 bits (119), Expect(2) = 4e-21
 Identities = 41/144 (28%), Positives = 65/144 (45%)
 Frame = -2

Query: 2619 MKKNDGLSTLITLVQLKDNNFNERADAIEMVLESKNKLGFLNGSTPKLKEDELKYNVEEN 2440
            +  ND    +IT VQLK              L +K K GF++GS  +   D         
Sbjct: 7    LTSNDNPGNIITQVQLK-------------ALRAKKKYGFVDGSIKQPDNDS-------- 45

Query: 2439 *YVDRFTDIKHH*TTFKVFQSQKRGL*KL*DELLQRFRAVNEPRYYELRAPIMSCKQKGM 2260
                   +++   T   +  S +     L +E+ Q+F   N PR  +L++ +++CKQ+G 
Sbjct: 46   ------PELEDWWTINSMLVSWE-----LWEEIKQQFSIGNGPRVQQLKSYLVNCKQEGQ 94

Query: 2259 FEATYYAKLKKL*DELANCETLCV 2188
                YY KLK L DEL N +++ V
Sbjct: 95   GIIVYYGKLKSLWDELNNYDSIPV 118



 Score = 60.1 bits (144), Expect = 6e-06
 Identities = 49/130 (37%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
 Frame = -2

Query: 1404 ANHRSFHAVVQGEIEPTTFFEAITHEKRRHAMQQEIDALETNGTWILANLPPEE----SS 1237
            A HR F A V    EP+T+ E I  E  R AM++EI ALE N TWI+ NLP E+    S 
Sbjct: 678  AQHRFFLATVTTGCEPSTYAEVIKDECWREAMRKEIQALEDNETWIVENLPLEKKAIGSK 737

Query: 1236 WL*MGIPNQT*I*WYCRT---I*GPPHHSWQPSS*G*GLHRNLCSCD*TSTVQTLLAAAV 1066
            W+     N       C+T   I G           G   +          TVQT LA   
Sbjct: 738  WVYKIKYNSDGSIERCKTRLVILG------NKKVEGIDYNETFAPTAKMVTVQTFLAVVA 791

Query: 1065 GKGWEIH*MD 1036
             KGWE+H MD
Sbjct: 792  MKGWELHQMD 801