BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00002310
         (578 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]    64   3e-09
pir||S54157 extensin-like protein - cowpea (fragment)                  60   4e-07
dbj|BAA13176.1| extensin [Catharanthus roseus]                         60   4e-07

>emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]
          Length = 358

 Score = 63.5 bits (153), Expect(2) = 3e-09
 Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 18/62 (29%)
 Frame = -2

Query: 346 ILMNWRRWWWRLVLINGWWRWRRFIHV---RWWWRR---------------FVNGRRWWW 221
           +L++WRR WWRLV +  WW W R +HV   RWWW R                V+ RRWWW
Sbjct: 187 VLVDWRRRWWRLVFV--WWWWWRVVHVWLLRWWWWRVVHVWLLGWWWWGLVLVDRRRWWW 244

Query: 220 RL 215
           RL
Sbjct: 245 RL 246



 Score = 23.9 bits (50), Expect(2) = 3e-09
 Identities = 13/18 (72%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = -1

Query: 419 TCK--PVVVETCILVVVG 372
           TCK   VVVETCI  VVG
Sbjct: 140 TCKREEVVVETCICRVVG 157


>pir||S54157 extensin-like protein - cowpea (fragment)
          Length = 279

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 53/131 (40%), Positives = 61/131 (46%), Gaps = 24/131 (18%)
 Frame = +3

Query: 135 LLAFSNHC*LQILIPSSSXXXXXXXXXSLHHHLLPFTN-----LRHHHL---TCINLLHL 290
           LL F++H  L +L               LHHHLL FT+     L  HHL   T ++LLHL
Sbjct: 24  LLMFTSHHLLHLLPHHLHMCISRHHHHLLHHHLLMFTSHHLLHLLPHHLPMFTSLHLLHL 83

Query: 291 --HH------PFISTSLHHHLLQFISILLTSISRLPHH-HQYTSLHHHRF---TSP---- 422
             HH      P     LH HLL F S  L  +  LPHH H   S HHH     TSP    
Sbjct: 84  LPHHLPMCISPHHHHLLHRHLLMFTSHHLLHL--LPHHLHMCISRHHHHLPMSTSPHHHH 141

Query: 423 LLHQKIPMSIS 455
           LLH  +PMS S
Sbjct: 142 LLHHHLPMSTS 152


>dbj|BAA13176.1| extensin [Catharanthus roseus]
          Length = 217

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 91  MTPLFTALVIALVALCLPSQTTADYKYSS 177
           MTPLFTALVIALVALCLPSQTTADYKYSS
Sbjct: 1   MTPLFTALVIALVALCLPSQTTADYKYSS 29