BLASTX nr result
ID: Catharanthus23_contig00002202
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00002202
(3985 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 2218 0.0
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 2217 0.0
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not... 2208 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 2208 0.0
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su... 2205 0.0
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr... 2204 0.0
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 2204 0.0
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 2203 0.0
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia... 2203 0.0
gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus... 2202 0.0
gb|EOY28253.1| DNA-directed RNA polymerase family protein isofor... 2201 0.0
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su... 2201 0.0
gb|ESW10701.1| hypothetical protein PHAVU_009G230400g [Phaseolus... 2196 0.0
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 2193 0.0
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su... 2189 0.0
ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca... 2188 0.0
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 2188 0.0
ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Popu... 2186 0.0
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh... 2186 0.0
gb|EMJ15758.1| hypothetical protein PRUPE_ppa000425mg [Prunus pe... 2186 0.0
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 2218 bits (5747), Expect = 0.0
Identities = 1096/1173 (93%), Positives = 1129/1173 (96%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSR+SAKGG+SGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 319
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCWVGIHRDPDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQRLLIK++DIQALQ RE+PE+GGWHDL+AKGF
Sbjct: 620 YGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV+AR+NPEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDV+IGKTTPI+QD+AQ G AARYT+RDHSTSLRHSE G+VDQVLLTT
Sbjct: 860 LAPPGTRVSGEDVVIGKTTPIAQDEAQ---GPAARYTRRDHSTSLRHSETGMVDQVLLTT 916
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 917 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTMEGITPDIIVNPHA 976
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 977 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1036
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR LT+ IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1037 TGRRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1096
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP
Sbjct: 1097 CMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 1156
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKR 241
YACKLLFQELMSMAIAPRM+TKD++Q +D++K+
Sbjct: 1157 YACKLLFQELMSMAIAPRMLTKDVKQAKDKKKK 1189
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 2217 bits (5744), Expect = 0.0
Identities = 1099/1174 (93%), Positives = 1126/1174 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSR+SAKGG+SGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCWVGIHRDPDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQRLLIKK+DI ALQ RES EEGGWHDL+AKGF
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
I+DLV AR+NPEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPI+Q++AQ G +ARYT+RDHS SLRHSE GIVDQVLLTT
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPIAQEEAQ---GQSARYTRRDHSISLRHSETGIVDQVLLTT 919
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 920 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 979
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 980 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1039
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR LTA IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1040 TGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1099
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP
Sbjct: 1100 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 1159
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TKD++ +DQ+K+G
Sbjct: 1160 YACKLLFQELMAMAIAPRMLTKDVKPTKDQKKKG 1193
>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 2208 bits (5721), Expect = 0.0
Identities = 1092/1174 (93%), Positives = 1123/1174 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 21 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 81 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 141 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSR+S+KGG+SGQY
Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 260
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 261 IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVG GE+CETKKAYYFGYIIHRLLLC
Sbjct: 321 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGEFCETKKAYYFGYIIHRLLLC 380
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 381 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 440
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 441 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCWVGIHRDPDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 561 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQRLLIKKRDI+ALQ RE+PEE GWHDL++ GF
Sbjct: 621 YGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVSNGFIEYIDTEEEETTMIS 680
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV AR+NPEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 681 MTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQS+IDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG
Sbjct: 801 SVIMNQSAIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 860
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPI+QD+AQ +A+RYT+RDHS SLRHSENGIVDQVLLTT
Sbjct: 861 LAPPGTRVSGEDVIIGKTTPIAQDEAQ--GQAASRYTRRDHSISLRHSENGIVDQVLLTT 918
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRS+RIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 919 NADGLRFVKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 978
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 979 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1038
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR LTA IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1039 TGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1098
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP
Sbjct: 1099 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 1158
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TKD++ + DQ+K+G
Sbjct: 1159 YACKLLFQELMAMAIAPRMLTKDVKPLNDQKKKG 1192
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 2208 bits (5721), Expect = 0.0
Identities = 1094/1174 (93%), Positives = 1124/1174 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 80 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMA+TQNRPPSTMFVRMLSR+SAKGG+SGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNG WVGIHRDPDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQRL+IKK+DIQ LQ RESP+EGGWHDL+AKG+
Sbjct: 620 YGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMIS 679
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV AR+NP +AY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR++TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDG 859
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQDDAQ G A+RYT++DHSTSLRHSE G+VDQVLLTT
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQDDAQ---GQASRYTRKDHSTSLRHSETGMVDQVLLTT 916
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 917 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 976
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 977 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1036
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1037 TGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1096
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP
Sbjct: 1097 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 1156
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TKD++ +DQ+K+G
Sbjct: 1157 YACKLLFQELMAMAIAPRMLTKDVKLAKDQKKKG 1190
>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
sinensis]
Length = 1195
Score = 2205 bits (5713), Expect = 0.0
Identities = 1097/1175 (93%), Positives = 1123/1175 (95%), Gaps = 1/1175 (0%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSD 82
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSR+SAKGG+SGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQ 322
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVTR+KRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 382
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 442
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCWVGIHRDP+M VNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQRLLIKKRDI ALQ RESPE+GGWHDL+AKGF
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV AR++PEEAY DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 862
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQD+AQ G A+RYT+RDHS SLRHSE G+VDQVLLTT
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQDEAQ---GQASRYTRRDHSISLRHSETGMVDQVLLTT 919
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 920 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 979
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 980 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1039
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR LTA IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1040 TGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1099
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKKNSFECRGCKNKTDIVQVHIP
Sbjct: 1100 CMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 1159
Query: 339 YACKLLFQELMSMAIAPRMMTK-DIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TK D +Q +D +K+G
Sbjct: 1160 YACKLLFQELMAMAIAPRMLTKEDTKQSKDHKKKG 1194
>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
gi|557525528|gb|ESR36834.1| hypothetical protein
CICLE_v10027701mg [Citrus clementina]
Length = 1195
Score = 2204 bits (5710), Expect = 0.0
Identities = 1096/1175 (93%), Positives = 1123/1175 (95%), Gaps = 1/1175 (0%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSD 82
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSR+SAKGG+SGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQ 322
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVTR+KRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 382
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 442
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCWVGIHRDP+M VNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQRLLIKKRDI ALQ RESPE+GGWHDL+AKGF
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV AR++PEEAY DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 862
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQD+AQ G A+RYT+RDHS SLRHSE G+VDQVLLTT
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQDEAQ---GQASRYTRRDHSISLRHSETGMVDQVLLTT 919
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 920 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 979
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 980 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1039
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR LTA IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1040 TGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1099
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGA+HFLKERLFDQSDAYRVHVCE CGLIAIANLKKNSFECRGCKNKTDIVQVHIP
Sbjct: 1100 CMIAHGASHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 1159
Query: 339 YACKLLFQELMSMAIAPRMMTK-DIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TK D +Q +D +K+G
Sbjct: 1160 YACKLLFQELMAMAIAPRMLTKEDTKQSKDHKKKG 1194
>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
arietinum]
Length = 1194
Score = 2204 bits (5710), Expect = 0.0
Identities = 1089/1174 (92%), Positives = 1126/1174 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKISFGQIYLSKPMMTESDGET+TLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETSTLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSR+S+KGG+SGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVT+EKRIKYAK+ILQ+EMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKDILQREMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCW+GIHRDPDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIV+KQRLLIKK+DI +LQ RESPEEGGWHDL++KGF
Sbjct: 623 YGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 682
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV AR+NPEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 802
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTP+SQ++AQ G AARY+KRDHS SLRHSE GIVDQVLLTT
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPLSQEEAQ---GQAARYSKRDHSISLRHSETGIVDQVLLTT 919
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 920 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 979
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 980 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1039
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1040 TGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1099
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKKNSFECRGCKNKTDIVQV+IP
Sbjct: 1100 CMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVYIP 1159
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TK+I+ I+DQ+K+G
Sbjct: 1160 YACKLLFQELMAMAIAPRMLTKEIKSIKDQKKKG 1193
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
tuberosum]
Length = 1191
Score = 2203 bits (5709), Expect = 0.0
Identities = 1092/1173 (93%), Positives = 1122/1173 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 80 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAE+QNRPPSTMFVRMLSR+SAKGG+SGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNG WVGIHRDPDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQRL+IKK+DIQ LQ RESP+EGGWHDL+AKG+
Sbjct: 620 YGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMIS 679
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV AR+NP +AY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+ TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRATTMGMRHGSYDKLDDDG 859
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQDDAQ G A+RYT++DHSTSLRHSE G+VDQVLLTT
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQDDAQ---GQASRYTRKDHSTSLRHSETGMVDQVLLTT 916
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGI+PDIIVNPHA
Sbjct: 917 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGISPDIIVNPHA 976
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 977 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1036
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1037 TGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1096
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP
Sbjct: 1097 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 1156
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKR 241
YACKLLFQELM+MAIAPRM+TKD++ +DQ+K+
Sbjct: 1157 YACKLLFQELMAMAIAPRMLTKDVKLAKDQKKK 1189
>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
Length = 1195
Score = 2203 bits (5709), Expect = 0.0
Identities = 1092/1174 (93%), Positives = 1124/1174 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 24 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 83
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 84 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 143
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 144 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 203
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAE+QNRPPSTMFVRMLSR+SAKGG+SGQY
Sbjct: 204 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 263
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 264 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 323
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 324 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 383
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 384 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 443
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 444 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 503
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE GTENFEEI
Sbjct: 504 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEXGTENFEEI 563
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFV+G W+GIHRDPDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 564 SPAVIPQATKIFVBGTWMGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 623
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQ+LLIKK+DIQ LQ RE+PEEGGWHDL+AKG+
Sbjct: 624 YGRCSRPLFIVEKQKLLIKKKDIQQLQQRETPEEGGWHDLVAKGYIEYIDTEEEETTMIS 683
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV A +NPE+AY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 684 MTINDLVQASINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 743
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 744 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 803
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR++TMGMRHGSYDKLDDDG
Sbjct: 804 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDG 863
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQDDAQ G A+RYT++DHSTSLRHSE G+VDQVLLTT
Sbjct: 864 LAPPGTRVSGEDVIIGKTTPISQDDAQ---GQASRYTRKDHSTSLRHSETGMVDQVLLTT 920
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 921 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHA 980
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 981 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1040
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1041 TGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1100
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP
Sbjct: 1101 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 1160
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TKD++Q RDQ+K+G
Sbjct: 1161 YACKLLFQELMAMAIAPRMLTKDVKQARDQKKKG 1194
>gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
Length = 1194
Score = 2202 bits (5707), Expect = 0.0
Identities = 1091/1174 (92%), Positives = 1124/1174 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIY+ISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 83 FAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSR+S+KGG+SGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 502
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNG W+GIHRDPDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGSWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIV+KQRLLIKKRDI ALQ RESPEEGGWHDL++KGF
Sbjct: 623 YGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 682
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV AR+NPE+AY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 862
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQ++AQ G A RYT+RDHS SLRHSE G+VDQVLLTT
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQEEAQ---GQALRYTRRDHSISLRHSETGMVDQVLLTT 919
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 920 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 979
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 980 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1039
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1040 TGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1099
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IP
Sbjct: 1100 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIP 1159
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TK+I+ +DQ+K+G
Sbjct: 1160 YACKLLFQELMAMAIAPRMLTKEIKSAKDQKKKG 1193
>gb|EOY28253.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
cacao]
Length = 1189
Score = 2201 bits (5703), Expect = 0.0
Identities = 1093/1174 (93%), Positives = 1125/1174 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSR+SAKGG+SGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVG++CETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCWVG+HR+PDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQRLLIKK+DI ALQ RESPE+GGWHDL+AKGF
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV ARVNPEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQ++AQ G A+RY++RDHS SLRHSE GIVDQVLLTT
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQ---GQASRYSRRDHSISLRHSETGIVDQVLLTT 916
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 917 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 976
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRG+E MYNGH
Sbjct: 977 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGH 1036
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1037 TGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1096
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IP
Sbjct: 1097 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIP 1156
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TK+ +DQ+K+G
Sbjct: 1157 YACKLLFQELMAMAIAPRMLTKE--PPKDQKKKG 1188
>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus]
Length = 1199
Score = 2201 bits (5702), Expect = 0.0
Identities = 1090/1175 (92%), Positives = 1124/1175 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 28 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 87
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 88 VAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 147
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 148 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 207
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAE+QNRPPSTMFVRMLSR+SAKGG+SGQY
Sbjct: 208 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 267
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 268 IRATLPYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 327
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYIIHRLLLC
Sbjct: 328 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 387
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 388 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 447
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 448 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 507
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 508 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 567
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCWVGIHRDP+M VNTEVGVVRDIRLKELRIYTD
Sbjct: 568 SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 627
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQRLLIKK+DI ALQ RESPE+GGWHDL+AKGF
Sbjct: 628 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 687
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
I+DL+ AR+NP EAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 688 MTISDLIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 747
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 748 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 807
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG
Sbjct: 808 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 867
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQ++AQ G AARY++RDHS SLRHSENGIVDQVLLTT
Sbjct: 868 LAPPGTRVSGEDVIIGKTTPISQEEAQ---GQAARYSRRDHSISLRHSENGIVDQVLLTT 924
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 925 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 984
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 985 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1044
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1045 TGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1104
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKK+SFECRGCKNKTDIVQV+IP
Sbjct: 1105 CMIAHGAAHFLKERLFDQSDAYRIHVCECCGLIAIANLKKSSFECRGCKNKTDIVQVYIP 1164
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRGN 235
YACKLLFQELM+MAIAPRM TK+I+ ++DQ+K+G+
Sbjct: 1165 YACKLLFQELMAMAIAPRMFTKEIKPLKDQKKKGS 1199
>gb|ESW10701.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris]
Length = 1196
Score = 2196 bits (5690), Expect = 0.0
Identities = 1084/1173 (92%), Positives = 1123/1173 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 21 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
AET+YKISFGQIYLSKPMMTESDGETA+LFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 81 SAETVYKISFGQIYLSKPMMTESDGETASLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 140
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 141 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSR+S+KGG+SGQY
Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 260
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMM+LLRPSLEEAFVIQNQQ
Sbjct: 261 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMDLLRPSLEEAFVIQNQQ 320
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVG+GEYCETKKAYYFGYIIHRLLLC
Sbjct: 321 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLC 380
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI
Sbjct: 381 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 440
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKT+TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 441 KAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCW+GIHRDPDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 561 SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 620
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIV++QRLLIKK+DI ALQ RESPEEGGWHDL++KGF
Sbjct: 621 YGRCSRPLFIVDRQRLLIKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 680
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV AR+NPEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 681 MTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 800
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 801 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 860
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQ++AQ G A RYT+RDHS SLRHSE GIVDQVLLTT
Sbjct: 861 LAPPGTRVSGEDVIIGKTTPISQEEAQ---GQALRYTRRDHSISLRHSETGIVDQVLLTT 917
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 918 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 977
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVD+ISKALHKCGYQMRG+E MYNGH
Sbjct: 978 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDSISKALHKCGYQMRGFETMYNGH 1037
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1038 TGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1097
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQV IP
Sbjct: 1098 CMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVFIP 1157
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKR 241
YACKLLFQELM+MAIAPRM+TKD++ +DQ++R
Sbjct: 1158 YACKLLFQELMAMAIAPRMLTKDVKSKKDQRRR 1190
>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1192
Score = 2193 bits (5682), Expect = 0.0
Identities = 1088/1174 (92%), Positives = 1120/1174 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTE QDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSR+S+KGG+SGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF TQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSYTQMMELLRPSLEEAFVIQNQQ 322
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCW+GIHRDPDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIV+KQRLLIKK+DI ALQ RESPE+GGWHDL++KGF
Sbjct: 623 YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMIS 682
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV AR+NPE+AY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV+IACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVSIACYSGYNQED 802
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQ++AQ G A RYT+RDHS SLRHSE GIVDQVLLTT
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQEEAQ---GQALRYTRRDHSISLRHSETGIVDQVLLTT 919
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 920 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 979
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 980 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1039
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1040 TGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1099
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IP
Sbjct: 1100 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIP 1159
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TK+++ QK+G
Sbjct: 1160 YACKLLFQELMAMAIAPRMLTKEVK--TTNQKKG 1191
>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1193
Score = 2189 bits (5672), Expect = 0.0
Identities = 1086/1174 (92%), Positives = 1119/1174 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRV+KKGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVVKKGHD 142
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQD KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSR+S+KGG+SGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DT MMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTLMMELLRPSLEEAFVIQNQQ 322
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCW+GIHRDPDM VNTEVGVVRDI LKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIILKELRIYTD 622
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIV+KQRLLIKK+DI ALQ RESPE+GGWHDL++KGF
Sbjct: 623 YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMIS 682
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV AR+NPE+AY TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQ++AQ G A RYT+RDHS SLRHSE GIVDQVLLTT
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQEEAQ---GQALRYTRRDHSISLRHSETGIVDQVLLTT 919
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 920 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 979
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 980 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1039
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1040 TGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1099
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IP
Sbjct: 1100 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIP 1159
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TK+++ +Q+K+G
Sbjct: 1160 YACKLLFQELMAMAIAPRMLTKEVK-TTNQKKKG 1192
>ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 1213
Score = 2188 bits (5670), Expect = 0.0
Identities = 1089/1192 (91%), Positives = 1125/1192 (94%), Gaps = 18/1192 (1%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 24 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 83
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 84 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 143
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 144 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 203
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAE+QNRPPSTMFVRMLSR+SAKGG+SGQY
Sbjct: 204 IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRASAKGGSSGQY 263
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 264 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 323
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRG+TVGVT+EKRIKYAK+ILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 324 VALDYIGKRGSTVGVTKEKRIKYAKDILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 383
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 384 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 443
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 444 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 503
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFE-- 2146
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFE
Sbjct: 504 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEVL 563
Query: 2145 ------EISPAVIPEATKIFVNGCWVGIHRDPDM----------XXXXXXXXXXXXXVNT 2014
EISPAVIP+ATKIFVNGCW+GIHRDPDM VNT
Sbjct: 564 VISFIKEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRFSAEGFDVVQVDVNT 623
Query: 2013 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIA 1834
EVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKK+DI +LQ RESPE+GGWHDL++
Sbjct: 624 EVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEDGGWHDLVS 683
Query: 1833 KGFXXXXXXXXXXXXXXXXXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFP 1654
KGF INDLV AR+NPEEAY+DTYTHCEIHPSLILGVCASIIPFP
Sbjct: 684 KGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFP 743
Query: 1653 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 1474
DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
Sbjct: 744 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 803
Query: 1473 GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 1294
GINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR
Sbjct: 804 GINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 863
Query: 1293 SNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHS 1114
+NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTP+SQ++ Q G AARY+KRDHS
Sbjct: 864 ANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEQQ---GQAARYSKRDHS 920
Query: 1113 TSLRHSENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 934
SLRHSE GIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 921 ISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 980
Query: 933 MPFTGEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 754
MP+T EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 981 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1040
Query: 753 LHKCGYQMRGYERMYNGHTGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 574
LHKCGYQMRG+E MYNGHTGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1041 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1100
Query: 573 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 394
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS
Sbjct: 1101 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1160
Query: 393 FECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
FECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRM+TK+++ I+DQ+K+G
Sbjct: 1161 FECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEVKAIKDQKKKG 1212
>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] gi|147841183|emb|CAN72948.1| hypothetical
protein VITISV_033708 [Vitis vinifera]
gi|302143287|emb|CBI21848.3| unnamed protein product
[Vitis vinifera]
Length = 1193
Score = 2188 bits (5670), Expect = 0.0
Identities = 1081/1174 (92%), Positives = 1122/1174 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 22 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 81
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
F ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+IKKGHD
Sbjct: 82 FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 141
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
EEVTETQ+F KVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 142 LEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPS+MFVRMLSR+SAKGG+SGQY
Sbjct: 202 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 262 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRG+TVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 322 VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI
Sbjct: 382 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 441
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 442 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEEW TENFEEI
Sbjct: 502 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 561
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP++TKIFVNGCWVGIHR+PD+ VNTEVGV+RDIRLKELR+YTD
Sbjct: 562 SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 621
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQRLLIKKRDI+ALQ RESPE+GGWHDL++KGF
Sbjct: 622 YGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMIS 681
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDL++AR+NPEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 682 MTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 742 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R NTMGMRHGSYDKLDDDG
Sbjct: 802 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG 861
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTPISQDD+Q G A+RYT+RDHSTSLRHSE+G+VDQVLLTT
Sbjct: 862 LAPPGTRVSGEDVIIGKTTPISQDDSQ---GQASRYTRRDHSTSLRHSESGMVDQVLLTT 918
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGITPDIIVNPHA
Sbjct: 919 NADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHA 978
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 979 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1038
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR LTA IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1039 TGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1098
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP
Sbjct: 1099 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 1158
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
YACKLLFQELM+MAIAPRM+TK+++ +DQ+K+G
Sbjct: 1159 YACKLLFQELMAMAIAPRMLTKEVKPPKDQKKKG 1192
>ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa]
gi|550340301|gb|EEE85647.2| hypothetical protein
POPTR_0004s04320g [Populus trichocarpa]
Length = 1215
Score = 2186 bits (5665), Expect = 0.0
Identities = 1093/1191 (91%), Positives = 1122/1191 (94%), Gaps = 17/1191 (1%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD
Sbjct: 27 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 86
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD
Sbjct: 87 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 146
Query: 3399 GEEVTETQDFGKVFIGK--------VPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFI 3244
GEEVTETQDF KVFIGK VPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFI
Sbjct: 147 GEEVTETQDFTKVFIGKASIMNYLFVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFI 206
Query: 3243 INGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSA 3064
INGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAE+QNRPPSTMFVRMLSR+SA
Sbjct: 207 INGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRTSA 266
Query: 3063 KGGASGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEE 2884
KGG+SGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEE
Sbjct: 267 KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEE 326
Query: 2883 AFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGY 2704
AFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGY
Sbjct: 327 AFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGY 386
Query: 2703 IIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGK 2524
IIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGK
Sbjct: 387 IIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGK 446
Query: 2523 DVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSP 2344
DVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSP
Sbjct: 447 DVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSP 506
Query: 2343 IGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEW 2164
IGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEW
Sbjct: 507 IGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEW 566
Query: 2163 GTENFEEISPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRL 1984
GTENFEEISPAVIP+ATKIFVNG WVGIHRDPDM VNTEVGVVRDIRL
Sbjct: 567 GTENFEEISPAVIPQATKIFVNGGWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRL 626
Query: 1983 KELRIYTDYGRCSRPLFIVEKQRLLIKKRDIQALQARES---------PEEGGWHDLIAK 1831
KELRIYTDYGRCSRPLFIVEKQ+LLI+K+DI ALQ R S EGGWHDL++K
Sbjct: 627 KELRIYTDYGRCSRPLFIVEKQKLLIRKKDIHALQQRVSHLIYNDHLFKYEGGWHDLVSK 686
Query: 1830 GFXXXXXXXXXXXXXXXXXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPD 1651
GF I+DLV AR+NPEEAY+DTYTHCEIHPSLILGVCASIIPFPD
Sbjct: 687 GFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPD 746
Query: 1650 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 1471
HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
Sbjct: 747 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 806
Query: 1470 INAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRS 1291
INAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRS
Sbjct: 807 INAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRS 866
Query: 1290 NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHST 1111
NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+Q++AQ G +ARYT+RDHS
Sbjct: 867 NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQ---GQSARYTRRDHSI 923
Query: 1110 SLRHSENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 931
SLRHSE G+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 924 SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 983
Query: 930 PFTGEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 751
P+T EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 984 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1043
Query: 750 HKCGYQMRGYERMYNGHTGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 571
HKCGYQMRG+E MYNGHTGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1044 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1103
Query: 570 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 391
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF
Sbjct: 1104 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1163
Query: 390 ECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
ECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRM+TKDI+Q + Q+K+G
Sbjct: 1164 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDIKQAKSQKKKG 1214
>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
Length = 1200
Score = 2186 bits (5665), Expect = 0.0
Identities = 1083/1173 (92%), Positives = 1120/1173 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
I+QEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q D
Sbjct: 29 ISQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQPD 88
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHD
Sbjct: 89 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 148
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 149 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 208
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE QNRPPSTMFVRMLSR+SAKGG+SGQY
Sbjct: 209 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAEAQNRPPSTMFVRMLSRTSAKGGSSGQY 268
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIRTEIPIIIVFRALGFVADKDILEHIC++ DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 269 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICFNSSDTQMMELLRPSLEEAFVIQNQQ 328
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRG+TVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC
Sbjct: 329 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 388
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQF I
Sbjct: 389 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFXI 448
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRL+SPIGREGKLA
Sbjct: 449 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLBSPIGREGKLA 508
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 509 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 568
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNG WVGIHR+PDM VNTEVGVVRDIRLKELRIYTD
Sbjct: 569 SPAVIPQATKIFVNGLWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 628
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIVEKQRLLIKK+D+QALQ RESP++GGWH+L+AKGF
Sbjct: 629 YGRCSRPLFIVEKQRLLIKKKDVQALQQRESPDDGGWHELVAKGFIEYIDTEEEETTMIS 688
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDL++A+VNP EAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 689 MTINDLLSAKVNPTEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 748
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 749 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 808
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG
Sbjct: 809 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 868
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTR SGEDVIIGKTTPIS DDAQ G AARYTKRDHSTSLRHSE G+VDQVLLTT
Sbjct: 869 LAPPGTRCSGEDVIIGKTTPISPDDAQ---GQAARYTKRDHSTSLRHSETGMVDQVLLTT 925
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EGI+PDIIVNPHA
Sbjct: 926 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGISPDIIVNPHA 985
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRG+E MYNGH
Sbjct: 986 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGH 1045
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L++ IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1046 TGRRLSSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1105
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYR+HVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIP
Sbjct: 1106 CMIAHGAAHFLKERLFDQSDAYRIHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 1165
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKR 241
YACKLLFQELMSMAIAPRM+TKDI+Q ++Q+K+
Sbjct: 1166 YACKLLFQELMSMAIAPRMLTKDIKQSKEQRKK 1198
>gb|EMJ15758.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica]
Length = 1192
Score = 2186 bits (5664), Expect = 0.0
Identities = 1077/1174 (91%), Positives = 1120/1174 (95%)
Frame = -2
Query: 3759 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 3580
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 79
Query: 3579 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 3400
FAET Y+I FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+K ++KKGHD
Sbjct: 80 FAETTYRIKFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKSIVKKGHD 139
Query: 3399 GEEVTETQDFGKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 3220
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 3219 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAETQNRPPSTMFVRMLSRSSAKGGASGQY 3040
IAQEKMSTNHVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRML+R+S+KGG+SGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLARTSSKGGSSGQY 259
Query: 3039 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFKDTQMMELLRPSLEEAFVIQNQQ 2860
IRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 2859 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 2680
VALDYIGKRGATVGV+REKRIKYAKEILQKEMLPHVGVGE+CETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVSREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 379
Query: 2679 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 2500
ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGK++NLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKELNLQFAI 439
Query: 2499 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 2320
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 2319 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 2140
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 2139 SPAVIPEATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVGVVRDIRLKELRIYTD 1960
SPAVIP+ATKIFVNGCWVGIHRDP+M VNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1959 YGRCSRPLFIVEKQRLLIKKRDIQALQARESPEEGGWHDLIAKGFXXXXXXXXXXXXXXX 1780
YGRCSRPLFIV+KQRLLIKK+DI ALQ RE+PE+GGWHDL+AKGF
Sbjct: 620 YGRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 1779 XXINDLVTARVNPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 1600
INDLV AR+NPEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 1599 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 1420
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 1419 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 1240
SVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 1239 LAPPGTRVSGEDVIIGKTTPISQDDAQVPSGSAARYTKRDHSTSLRHSENGIVDQVLLTT 1060
LAPPGTRVSGEDVIIGKTTP++QD+AQ +A+RYT+RDHS SLRHSE GIVDQVLLTT
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPMAQDEAQ--GQAASRYTRRDHSISLRHSETGIVDQVLLTT 917
Query: 1059 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPFTGEGITPDIIVNPHA 880
NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP+T EG+TPDIIVNPHA
Sbjct: 918 NADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGVTPDIIVNPHA 977
Query: 879 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGYERMYNGH 700
IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALH CGYQMRG+E MYNGH
Sbjct: 978 IPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHSCGYQMRGFETMYNGH 1037
Query: 699 TGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 520
TGR L+A IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD
Sbjct: 1038 TGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERD 1097
Query: 519 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIP 340
CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IP
Sbjct: 1098 CMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIP 1157
Query: 339 YACKLLFQELMSMAIAPRMMTKDIRQIRDQQKRG 238
YACKLLFQELMSMAIAPRM+TKDI+ +DQ+K+G
Sbjct: 1158 YACKLLFQELMSMAIAPRMLTKDIKPAKDQKKKG 1191