BLASTX nr result
ID: Catharanthus23_contig00001475
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00001475
(644 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006484165.1| PREDICTED: transcription factor TCP20-like [... 61 2e-13
ref|XP_006437974.1| hypothetical protein CICLE_v10032374mg [Citr... 61 2e-13
ref|XP_002514876.1| transcription factor, putative [Ricinus comm... 54 8e-12
gb|EOX99738.1| Teosinte branched 1 isoform 1 [Theobroma cacao] g... 53 2e-11
gb|EXB40331.1| hypothetical protein L484_017473 [Morus notabilis] 49 1e-09
gb|ADL36832.1| TCP domain class transcription factor [Malus dome... 42 8e-08
gb|EMJ18947.1| hypothetical protein PRUPE_ppa009925mg [Prunus pe... 41 3e-07
ref|XP_002304668.1| hypothetical protein POPTR_0003s16630g [Popu... 50 2e-06
ref|XP_002512905.1| transcription factor, putative [Ricinus comm... 39 5e-06
>ref|XP_006484165.1| PREDICTED: transcription factor TCP20-like [Citrus sinensis]
Length = 274
Score = 61.2 bits (147), Expect(2) = 2e-13
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Frame = -2
Query: 469 GTGFXXXXXXXXXXXATQNLNSLPKFGFHGVEFPN---------SASFVQNHHLPGLELG 317
G+GF ++NL++ PKFGFHG+EFPN S +H +PGLELG
Sbjct: 160 GSGFIQNSGQLTSNFGSENLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELG 219
Query: 316 LSQEAHIGGFN 284
LSQ+AH+G N
Sbjct: 220 LSQDAHVGVMN 230
Score = 40.8 bits (94), Expect(2) = 2e-13
Identities = 27/52 (51%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = -3
Query: 618 GNSVSLGLHSKFDEGFGI------RMNWAMMSGNMGRSNLQPPTGGGSSWPS 481
GNSVS GLH+K EG G R NW MMS N GRS Q P+G WP+
Sbjct: 110 GNSVSAGLHTKI-EGLGPGVGSINRANWTMMSANFGRS--QIPSG---VWPT 155
>ref|XP_006437974.1| hypothetical protein CICLE_v10032374mg [Citrus clementina]
gi|557540170|gb|ESR51214.1| hypothetical protein
CICLE_v10032374mg [Citrus clementina]
Length = 274
Score = 61.2 bits (147), Expect(2) = 2e-13
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Frame = -2
Query: 469 GTGFXXXXXXXXXXXATQNLNSLPKFGFHGVEFPN---------SASFVQNHHLPGLELG 317
G+GF ++NL++ PKFGFHG+EFPN S +H +PGLELG
Sbjct: 160 GSGFIQNSGQLTSNFGSENLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELG 219
Query: 316 LSQEAHIGGFN 284
LSQ+AH+G N
Sbjct: 220 LSQDAHVGVMN 230
Score = 40.8 bits (94), Expect(2) = 2e-13
Identities = 27/52 (51%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = -3
Query: 618 GNSVSLGLHSKFDEGFGI------RMNWAMMSGNMGRSNLQPPTGGGSSWPS 481
GNSVS GLH+K EG G R NW MMS N GRS Q P+G WP+
Sbjct: 110 GNSVSAGLHAKI-EGLGPGVGSINRANWTMMSANFGRS--QIPSG---VWPT 155
>ref|XP_002514876.1| transcription factor, putative [Ricinus communis]
gi|223545927|gb|EEF47430.1| transcription factor,
putative [Ricinus communis]
Length = 302
Score = 54.3 bits (129), Expect(2) = 8e-12
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Frame = -2
Query: 469 GTGFXXXXXXXXXXXATQNLNSLPKFGFHGVEFPN---------SASFVQNHHLPGLELG 317
G G+ ++ N+LPKFGFHGVE PN S N +PGLELG
Sbjct: 190 GAGYISNSSQSAMNFGNESANALPKFGFHGVELPNINMGLMSFYSMFNATNQQVPGLELG 249
Query: 316 LSQEAHIGGFN 284
LSQ+ H G N
Sbjct: 250 LSQDGHTGVMN 260
Score = 42.0 bits (97), Expect(2) = 8e-12
Identities = 27/52 (51%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = -3
Query: 618 GNSVSLGLHSKFDEGFGI------RMNWAMMSGNMGRSNLQPPTGGGSSWPS 481
GNSVS GLHSK EG G R NW MM+ N+GR N+ T G WPS
Sbjct: 139 GNSVSAGLHSKM-EGIGPSVGSRDRANWTMMNSNLGRCNV---TNG--MWPS 184
>gb|EOX99738.1| Teosinte branched 1 isoform 1 [Theobroma cacao]
gi|508707843|gb|EOX99739.1| Teosinte branched 1 isoform
1 [Theobroma cacao]
Length = 294
Score = 53.1 bits (126), Expect(2) = 2e-11
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 9/55 (16%)
Frame = -2
Query: 421 TQNLNSLPKFGFHGVEFPN-SASFV--------QNHHLPGLELGLSQEAHIGGFN 284
++N N++PK+GFHG+EFP+ + FV N +PGLELGLSQ+ H G N
Sbjct: 202 SENSNNIPKYGFHGLEFPHMNMGFVSFSSLLNGSNQQVPGLELGLSQDPHFGVLN 256
Score = 42.0 bits (97), Expect(2) = 2e-11
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
Frame = -3
Query: 618 GNSVSLGLHSKFDE-GFGI----RMNWAMMSGNMGRSNLQPPTGGGSSWPS 481
GNSV GLH+K + G GI R NW+MMSGN+ RS++ P+G +WPS
Sbjct: 134 GNSVPAGLHTKIEGLGSGIGSRDRNNWSMMSGNIERSHI--PSG---AWPS 179
>gb|EXB40331.1| hypothetical protein L484_017473 [Morus notabilis]
Length = 269
Score = 48.5 bits (114), Expect(2) = 1e-09
Identities = 32/78 (41%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Frame = -2
Query: 484 ISGFGGTGFXXXXXXXXXXXATQNLNSL-PKFGFHGVEFP----------NSASFVQNHH 338
I GFG +GF +N N L PKFGFHG +FP N+ N
Sbjct: 150 IGGFG-SGFFPNSGQSTTSFGGENANMLLPKFGFHGFDFPPGVNLGAVSFNTVIGGGNQQ 208
Query: 337 LPGLELGLSQEAHIGGFN 284
+PGLELGLSQ+ HI N
Sbjct: 209 VPGLELGLSQDGHIRVLN 226
Score = 40.4 bits (93), Expect(2) = 1e-09
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = -3
Query: 618 GNSVSLGLHSKFDEGFGIRMNWAMMSGNMGRSN-LQPPTGGGSS 490
GNSVS LH++ ++ G R NWA+MSGN+GRS+ + P GG S
Sbjct: 114 GNSVSSALHTRMED-LG-RANWAVMSGNLGRSHGIWPGIGGFGS 155
>gb|ADL36832.1| TCP domain class transcription factor [Malus domestica]
Length = 315
Score = 42.0 bits (97), Expect(2) = 8e-08
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -3
Query: 618 GNSVSLGLHSKFDE---GFGIRMNWAMMSGNMGRSNLQPPTGGGSSWP 484
G S+S GLH K DE G R +WAM+ GN+GR ++ G G WP
Sbjct: 151 GTSLSAGLHQKIDELGGSSGGRTSWAMVGGNLGRPHV---AGVGGLWP 195
Score = 40.8 bits (94), Expect(2) = 8e-08
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 13/59 (22%)
Frame = -2
Query: 421 TQNLNSLPKFGFHGVEFPNS----ASFV---------QNHHLPGLELGLSQEAHIGGFN 284
T++ N L K GF G + P S SF Q LPGLELGLSQ+ HIG N
Sbjct: 217 TESSNYLQKIGFPGFDLPVSNLGPMSFTSILGGGNQQQQQQLPGLELGLSQDGHIGVLN 275
>gb|EMJ18947.1| hypothetical protein PRUPE_ppa009925mg [Prunus persica]
Length = 272
Score = 40.8 bits (94), Expect(2) = 3e-07
Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 14/60 (23%)
Frame = -3
Query: 618 GNSVSLGLHSKFDE------GFGIRMNWAMMSGNMGR----SNLQPPTGG----GSSWPS 481
G S+S GLH K DE G G R +WAM+ GN+GR + L PP SS PS
Sbjct: 109 GTSLSAGLHQKIDELGGSSIGSGSRTSWAMVGGNLGRPHVATGLWPPVSSFGFQSSSGPS 168
Score = 40.0 bits (92), Expect(2) = 3e-07
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 10/56 (17%)
Frame = -2
Query: 421 TQNLNSLPKFGFHGVEFPNS----ASFVQ------NHHLPGLELGLSQEAHIGGFN 284
+++ N + K GF G + P S SF N LPGLELGLSQ+ HIG N
Sbjct: 174 SESSNYMQKIGFPGFDLPVSNMGPMSFTSILGGGSNQQLPGLELGLSQDGHIGVLN 229
>ref|XP_002304668.1| hypothetical protein POPTR_0003s16630g [Populus trichocarpa]
gi|222842100|gb|EEE79647.1| hypothetical protein
POPTR_0003s16630g [Populus trichocarpa]
Length = 302
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 29/71 (40%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Frame = -2
Query: 469 GTGFXXXXXXXXXXXATQNLNSLPKFGFHGVEFPN---------SASFVQNHHLPGLELG 317
G GF +N ++LPK+GF GVEFPN S N LPGLELG
Sbjct: 191 GLGFVPNSGQSTSNFGNENSSTLPKYGFQGVEFPNINMGLMSFYSMFSGTNQQLPGLELG 250
Query: 316 LSQEAHIGGFN 284
LSQ+ H N
Sbjct: 251 LSQDGHSAMLN 261
Score = 27.3 bits (59), Expect(2) = 2e-06
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = -3
Query: 618 GNSVSLGLHSKFDEGFG-------IRMNWAMMSGNMGRSNLQPPTGGGSSWPS 481
G SVS GLH+K EG G R +W + + +G SN+ TG WPS
Sbjct: 140 GGSVSTGLHAKM-EGLGPGVTGSRDRNDWTLSNTKLGISNV--ATG---VWPS 186
>ref|XP_002512905.1| transcription factor, putative [Ricinus communis]
gi|223547916|gb|EEF49408.1| transcription factor,
putative [Ricinus communis]
Length = 320
Score = 38.9 bits (89), Expect(2) = 5e-06
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Frame = -2
Query: 484 ISGFGGTGFXXXXXXXXXXXATQNLNSLPKFGFHGVEFPNS----ASFVQ------NHHL 335
+ GFG ++ + L K GF G + P + SF N +
Sbjct: 206 VGGFGFQSSSTTTGPVTSNLGNESSSYLQKIGFPGFDLPGNNMGPMSFTSILGGTSNQQI 265
Query: 334 PGLELGLSQEAHIGGFN 284
PGLELGLSQ+ HIG N
Sbjct: 266 PGLELGLSQDGHIGVLN 282
Score = 37.7 bits (86), Expect(2) = 5e-06
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 14/54 (25%)
Frame = -3
Query: 618 GNSVSLGLHSKFDEGFGI--------RMNWAMMSGNMGR------SNLQPPTGG 499
G S+S GLH K D+ G R +WAM+ GN+GR + L PP GG
Sbjct: 155 GTSLSAGLHQKIDDLGGSSSITSSNSRTSWAMVGGNLGRPHHVATTGLWPPVGG 208