BLASTX nr result
ID: Catharanthus23_contig00001211
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00001211
(2136 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isof... 241 1e-60
ref|XP_002531375.1| RNA and export factor binding protein, putat... 238 1e-59
ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solan... 236 3e-59
gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus... 234 9e-59
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor... 231 1e-57
ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isofor... 229 3e-57
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 228 1e-56
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro... 227 1e-56
ref|XP_006363386.1| PREDICTED: THO complex subunit 4-like [Solan... 227 2e-56
emb|CAG26903.1| ALY protein [Nicotiana benthamiana] 226 3e-56
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 225 5e-56
gb|EOY34109.1| RNA-binding family protein [Theobroma cacao] 225 7e-56
ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [A... 224 2e-55
gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus pe... 221 8e-55
ref|XP_004143092.1| PREDICTED: RNA and export factor-binding pro... 221 1e-54
ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer... 219 4e-54
gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus no... 217 2e-53
gb|EOY07572.1| RNA-binding family protein [Theobroma cacao] 216 2e-53
ref|XP_003606654.1| THO complex subunit [Medicago truncatula] gi... 209 3e-51
gb|ESW04085.1| hypothetical protein PHAVU_011G066000g [Phaseolus... 209 4e-51
>ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isoform X1 [Glycine max]
Length = 243
Score = 241 bits (614), Expect = 1e-60
Identities = 134/246 (54%), Positives = 155/246 (63%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAWKH 1781
AALDMTL+D+IK NKK +ANRAAPY+AAKAPE+AWKH
Sbjct: 3 AALDMTLEDIIKNNKKSSLANTRGRGRASGPGPARRLPNRAANRAAPYAAAKAPETAWKH 62
Query: 1780 DMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTIH 1601
DM+++ Y G RASSIETGTKLYISNLDYGVSN+D+KELF EVGD+KR T+H
Sbjct: 63 DMYANQPVAAAYP----GGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDVKRHTVH 118
Query: 1600 YDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXXX 1421
YDRSGRSKGTAEVVFSRR DA+AAVKRYNNVQLDGKPMK++IVGTN+
Sbjct: 119 YDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNIA-THAAPPAVNGT 177
Query: 1420 XXXXXGVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKYHK 1241
GVPRS Q EK+SAEDLDADLEKYH
Sbjct: 178 FGNPTGVPRSGQGRSGSLGRPRGGSRGRGSIQRGRGRGRGGRDEKVSAEDLDADLEKYHA 237
Query: 1240 ESMEIS 1223
E+M+++
Sbjct: 238 EAMQLN 243
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor binding
protein, putative [Ricinus communis]
Length = 247
Score = 238 bits (606), Expect = 1e-59
Identities = 136/245 (55%), Positives = 153/245 (62%), Gaps = 1/245 (0%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAWKH 1781
+ALDM+LDD+IK NKK NRAAPY+AAKAPES W+H
Sbjct: 3 SALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAAPYAAAKAPESTWQH 62
Query: 1780 DMFSSDQAIGGYSAQAGG-SRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTI 1604
DMF+ +G + Q GG SRAS IETGTKLYISNL+YGVSNED+KELFSEVGDLKR +I
Sbjct: 63 DMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSI 122
Query: 1603 HYDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXX 1424
HYDRSGRSKGTAEVVFSRR DA+AAVKRYNNVQLDGKPMKI+IVGTN+
Sbjct: 123 HYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIA-TPAATPAANG 181
Query: 1423 XXXXXXGVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKYH 1244
G PR Q GEK+SAEDLDADLEKYH
Sbjct: 182 NFGNSNGAPRGGQ-GRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLEKYH 240
Query: 1243 KESME 1229
E+M+
Sbjct: 241 SEAMQ 245
>ref|XP_004251323.1| PREDICTED: THO complex subunit 4-like [Solanum lycopersicum]
Length = 251
Score = 236 bits (602), Expect = 3e-59
Identities = 140/249 (56%), Positives = 156/249 (62%), Gaps = 5/249 (2%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKK----XXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPES 1793
AALDMTLDDLIK+NK SANRAAPYS AKAP++
Sbjct: 4 AALDMTLDDLIKKNKTGTGGKPRGRGRGAASTSSAGPSRRVPNRSANRAAPYSIAKAPQA 63
Query: 1792 AWKHDMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKR 1613
+W HDMF +DQA+ QAGG RASSIETGTKLYISNLDYGVSNED+KELFSE+GDLKR
Sbjct: 64 SWNHDMFEADQAVA--FGQAGG-RASSIETGTKLYISNLDYGVSNEDIKELFSEIGDLKR 120
Query: 1612 CTIHYDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXX 1433
+HYDRSGRSKGTAEVVFSRRQDA+A VKR+NNVQLDGKPMKI+IVGTN+V
Sbjct: 121 YAVHYDRSGRSKGTAEVVFSRRQDALAGVKRFNNVQLDGKPMKIEIVGTNIVTPTAPFSN 180
Query: 1432 XXXXXXXXXGVPRSAQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADL 1256
G PRS Q GEK+SAEDLDADL
Sbjct: 181 GAFGFGDTNGAPRSGQVRGGGFGRSRGGRGRDRGFRGGNRGWGRGGRGEKVSAEDLDADL 240
Query: 1255 EKYHKESME 1229
KYH E+M+
Sbjct: 241 MKYHTEAMQ 249
>gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus vulgaris]
gi|561023569|gb|ESW22299.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
Length = 245
Score = 234 bits (598), Expect = 9e-59
Identities = 130/246 (52%), Positives = 152/246 (61%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAWKH 1781
AALDMTLDD+IK NKK + NR APY+AAKAPESAW+H
Sbjct: 3 AALDMTLDDIIKNNKKSASANTRGRGRASGPGPARRLPNRAGNRPAPYAAAKAPESAWQH 62
Query: 1780 DMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTIH 1601
DM++ ++ Q G RASSIETGTKLYISNLDYGVSN+D+KELF EVGDLKR T+H
Sbjct: 63 DMYADQGVATAFAGQGG--RASSIETGTKLYISNLDYGVSNDDIKELFLEVGDLKRHTVH 120
Query: 1600 YDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXXX 1421
YDRSGRSKGTAEVVFSRR DA+AAVKRY+NVQLDGKPMK++IVGTN+
Sbjct: 121 YDRSGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEIVGTNIATHAAVPPVNGTF 180
Query: 1420 XXXXXGVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKYHK 1241
PRS Q EK+SAEDLDA+LEKYH
Sbjct: 181 GNSGGP-PRSGQGRSGLLGRPRGAPRGRGSSRRGRGGRGRDRDEKVSAEDLDAELEKYHA 239
Query: 1240 ESMEIS 1223
E+M+++
Sbjct: 240 EAMQLN 245
>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 231 bits (589), Expect = 1e-57
Identities = 133/248 (53%), Positives = 158/248 (63%), Gaps = 2/248 (0%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAWKH 1781
AA+DM+LDD+IK NKK +ANRAAPY+ AKAPE+ W+H
Sbjct: 3 AAMDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFPNRAANRAAPYATAKAPEATWQH 62
Query: 1780 DMFSSDQ-AIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTI 1604
D+++ Q A GY AQ G RA+SIETGTKLYISNLDYGVS++D+KELF+EVGDLKR +
Sbjct: 63 DLYADQQVAAAGYPAQGG--RAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAV 120
Query: 1603 HYDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXX 1424
HYDRSGRSKGTAEVVFSRR DA+AAVKRYNNVQLDGKPMKI+IVGTN +
Sbjct: 121 HYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTN-ISTPGVAPARNG 179
Query: 1423 XXXXXXGVPRSAQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKY 1247
GVPRS Q GEK+SA+DLDADLEKY
Sbjct: 180 AIGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKY 239
Query: 1246 HKESMEIS 1223
H E+M+++
Sbjct: 240 HAEAMQLN 247
>ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571492362|ref|XP_006592205.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 229 bits (585), Expect = 3e-57
Identities = 132/248 (53%), Positives = 157/248 (63%), Gaps = 2/248 (0%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAWKH 1781
AA+DM+LDD+IK NKK +ANRAAPY+ AKAPE+ W+H
Sbjct: 3 AAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYAPAKAPEATWQH 62
Query: 1780 DMFSSDQ-AIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTI 1604
D+++ A GY AQ G RA+SIETGTKLYISNLDYGVSN+D+KELF+EVGDLKR +
Sbjct: 63 DLYADQHVAAAGYPAQGG--RAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRHAV 120
Query: 1603 HYDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXX 1424
HYDRSGRSKGTAEVVFSRR DA++AVKRYNNVQLDGKPMKI+IVGTN +
Sbjct: 121 HYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTN-ISTPGVAPAPNG 179
Query: 1423 XXXXXXGVPRSAQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKY 1247
GVPRS Q GEK+SA+DLDADLEKY
Sbjct: 180 AIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKY 239
Query: 1246 HKESMEIS 1223
H E+M+++
Sbjct: 240 HAEAMQLN 247
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 228 bits (580), Expect = 1e-56
Identities = 129/244 (52%), Positives = 148/244 (60%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAWKH 1781
+ALDM+LDD+IK NKK ANR APY+ AKAPE+ W+H
Sbjct: 3 SALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYTTAKAPETTWQH 62
Query: 1780 DMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTIH 1601
DMF+ + + Q G RAS+IETGTKLYISNLDYGVSNED+KELFSEVGDLKR +IH
Sbjct: 63 DMFADQ--VSAFPVQQAG-RASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 1600 YDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXXX 1421
YDRSGRSKGTAEVV+SRR DA+AAVKRYNNVQLDGKPMKI+IVGTN+
Sbjct: 120 YDRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATRTAAPAANVNF 179
Query: 1420 XXXXXGVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKYHK 1241
VPR Q EKISAEDLDADL+KY+
Sbjct: 180 GNSNG-VPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLDKYYS 238
Query: 1240 ESME 1229
E+ E
Sbjct: 239 EASE 242
>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 227 bits (579), Expect = 1e-56
Identities = 138/246 (56%), Positives = 154/246 (62%), Gaps = 1/246 (0%)
Frame = -3
Query: 1957 ALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXS-ANRAAPYSAAKAPESAWKH 1781
ALDM+LDDLIK NK+ ANR PYS +KAPE+ W+H
Sbjct: 4 ALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKAPETTWQH 63
Query: 1780 DMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTIH 1601
DMF+ DQA Y AQAG R S+IETGTKLYISNLDYGVSNED+KELFSEVGDLKR +IH
Sbjct: 64 DMFA-DQA-AAYPAQAG--RTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 1600 YDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXXX 1421
YDRSGRSKGTAEVVFSRR DA+AAVKRYNNVQLDGKPMKI+IVGTN+
Sbjct: 120 YDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTNGT 179
Query: 1420 XXXXXGVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKYHK 1241
G RSAQ GEK+SAEDLDADLEKYH
Sbjct: 180 FGNSNGGLRSAQ--GRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHS 237
Query: 1240 ESMEIS 1223
E+M+I+
Sbjct: 238 EAMQIN 243
>ref|XP_006363386.1| PREDICTED: THO complex subunit 4-like [Solanum tuberosum]
Length = 254
Score = 227 bits (578), Expect = 2e-56
Identities = 136/252 (53%), Positives = 152/252 (60%), Gaps = 8/252 (3%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKK----XXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPES 1793
AALDMTLDDLIK+NK SANRAAPYS AKAPE+
Sbjct: 4 AALDMTLDDLIKKNKTGTGGKPRGRGCGAASTSSAGPSRRFPNRSANRAAPYSTAKAPEA 63
Query: 1792 AWKHDMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKR 1613
+W HDMF++DQA+ QAGG RASSIETGTKLYISNLDYGVS ED+KELFSE+GDLKR
Sbjct: 64 SWNHDMFAADQAVA--FGQAGG-RASSIETGTKLYISNLDYGVSKEDIKELFSEIGDLKR 120
Query: 1612 CTIHYDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXX 1433
+HYDRSGRSKGT EVVFSRRQD +A VKR+NNVQLDGKPMKI+IVGTN+V
Sbjct: 121 YAVHYDRSGRSKGTTEVVFSRRQDTLAGVKRFNNVQLDGKPMKIEIVGTNIVTPTAPFSN 180
Query: 1432 XXXXXXXXXGVPR----SAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLD 1265
G PR GEK+SAEDLD
Sbjct: 181 GAFGFGDTNGAPRRYAFGQVRGGGFGRSRGARGRGRGFRGGNRGWGRGGRGEKVSAEDLD 240
Query: 1264 ADLEKYHKESME 1229
ADL KYH E+M+
Sbjct: 241 ADLMKYHTEAMQ 252
>emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
Length = 252
Score = 226 bits (576), Expect = 3e-56
Identities = 134/247 (54%), Positives = 148/247 (59%), Gaps = 3/247 (1%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNK--KXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAW 1787
AALDM+LDDLIK+NK SANRAAPYS AKAPE+AW
Sbjct: 4 AALDMSLDDLIKKNKTDTGGKRRGRGRGGASGPGPARRFPNRSANRAAPYSTAKAPEAAW 63
Query: 1786 KHDMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCT 1607
HDMF++ + G ASSI TGTKLYISNLDYGVSNED+KELFSE GDLKR
Sbjct: 64 NHDMFAAADQAFPFGQAGGDQAASSISTGTKLYISNLDYGVSNEDIKELFSEAGDLKRYA 123
Query: 1606 IHYDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXX 1427
IHYDRSGRSKGTAEVVFSRRQDA+AAVKRYNNVQLDGKPMKI+IVGTN+
Sbjct: 124 IHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAAPAFNGA 183
Query: 1426 XXXXXXXGVPRSAQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEK 1250
G PR+ Q GEK+SAEDLDADL K
Sbjct: 184 FGFGDTNGGPRTDQARSGGFGRSRGGRGRGRGFRGGSRGRGRGDRGEKVSAEDLDADLMK 243
Query: 1249 YHKESME 1229
YH E+M+
Sbjct: 244 YHTEAMQ 250
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 225 bits (574), Expect = 5e-56
Identities = 128/244 (52%), Positives = 147/244 (60%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAWKH 1781
+ALDM+LDD+IK NKK ANR APY+ AKAPE+ W+H
Sbjct: 3 SALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYTTAKAPETTWQH 62
Query: 1780 DMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTIH 1601
DMF+ + + Q G RAS+IETGTKLYISNLDYGVSNED+KELFSEVGDLKR +IH
Sbjct: 63 DMFADQ--VSAFPVQQAG-RASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 1600 YDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXXX 1421
YDRSGRSKGTAEVV+SRR DA+AAVKRYN VQLDGKPMKI+IVGTN+
Sbjct: 120 YDRSGRSKGTAEVVYSRRADAVAAVKRYNTVQLDGKPMKIEIVGTNIATRTAAPAANVNF 179
Query: 1420 XXXXXGVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKYHK 1241
VPR Q EKISAEDLDADL+KY+
Sbjct: 180 GNSNG-VPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLDKYYS 238
Query: 1240 ESME 1229
E+ E
Sbjct: 239 EASE 242
>gb|EOY34109.1| RNA-binding family protein [Theobroma cacao]
Length = 241
Score = 225 bits (573), Expect = 7e-56
Identities = 132/244 (54%), Positives = 152/244 (62%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAWKH 1781
+AL+M+LDDLIK+N+K ANR+ PY+AAKAPE+ W+H
Sbjct: 3 SALEMSLDDLIKRNRKSGSGNSRGRGRGSGPGPARRFPNRGANRSGPYTAAKAPETTWQH 62
Query: 1780 DMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTIH 1601
DM+S A + QAG RAS+IETGTKLYISNLDYGVSN+D+KELF+EVGDLKR TIH
Sbjct: 63 DMYSDKGA--AFQGQAG--RASAIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRFTIH 118
Query: 1600 YDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXXX 1421
YDRSGRSKGTAEVVFSRR DAMAAVKRYNNVQLDGKPMKI+IVGTNV
Sbjct: 119 YDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNVA-TPGAPSAGNGA 177
Query: 1420 XXXXXGVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKYHK 1241
G PR GEK+SAEDLDA+LEKYH
Sbjct: 178 FGNSNGAPRGGH--GRGGGFGKQRGGGGGRGFGRGRGRGKGRGEKVSAEDLDAELEKYHS 235
Query: 1240 ESME 1229
E+M+
Sbjct: 236 EAMQ 239
>ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [Amborella trichopoda]
gi|548848813|gb|ERN07718.1| hypothetical protein
AMTR_s00012p00035940 [Amborella trichopoda]
Length = 253
Score = 224 bits (570), Expect = 2e-55
Identities = 136/255 (53%), Positives = 156/255 (61%), Gaps = 9/255 (3%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKK----XXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAK---- 1805
+ALDM+LDDLIK NKK +ANRAAPYS K
Sbjct: 3 SALDMSLDDLIKNNKKSGGGGGGGVMRGRNRGGTSGPVRRIQNRTANRAAPYSMGKAFQA 62
Query: 1804 APESAWKHDMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVG 1625
APE+ W+HD+F+ +G Y QA +R S+IETGTKLYISNLDYGVSNED+KELFSEVG
Sbjct: 63 APETTWQHDLFA--DPVGPYGVQA--ARPSAIETGTKLYISNLDYGVSNEDIKELFSEVG 118
Query: 1624 DLKRCTIHYDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXX 1445
DLKR +IHYDRSGRSKGTAEVVFSRR DA+AAVKRYNNVQLDGKPMKI+IVGTN+V
Sbjct: 119 DLKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNLVTPAP 178
Query: 1444 XXXXXXXXXXXXXGVPRSAQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDL 1268
G+PRS Q GEK+SA DL
Sbjct: 179 IPQVANGLLATPNGIPRSVQPRGAGIIGRGPRGGGRGGGRGRGRGGRGGGRGEKVSAADL 238
Query: 1267 DADLEKYHKESMEIS 1223
DADLEKYH E+M+I+
Sbjct: 239 DADLEKYHSEAMQIN 253
>gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus persica]
Length = 252
Score = 221 bits (564), Expect = 8e-55
Identities = 132/250 (52%), Positives = 153/250 (61%), Gaps = 8/250 (3%)
Frame = -3
Query: 1954 LDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAWKHDM 1775
L+M+LDDLIK +KK +ANR PY+AAKAPE+AW+HD+
Sbjct: 5 LNMSLDDLIKTSKKSGSGNARGRGRASGPGPARRLPNRAANRTTPYAAAKAPETAWQHDL 64
Query: 1774 FSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTIHYD 1595
++ DQ + AQAG RAS+IETGTKLYISNLDYGVSNED+KELFSEVGDLKR +HYD
Sbjct: 65 YT-DQGAAAFPAQAG--RASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGVHYD 121
Query: 1594 RSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVV---XXXXXXXXXXX 1424
RSGRSKGTAEVVFSRR DA+AAVKRYNNVQLDGKPMKI+IVGTN+
Sbjct: 122 RSGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGGPPTLPPAANG 181
Query: 1423 XXXXXXGVPRSAQ-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDAD 1259
GVPR Q GEK+SAEDLDA+
Sbjct: 182 NFGNSNGVPRGGQSRGGAFGRIRGGGGRGPRRGGRGRGSGNGGGRGRGGEKVSAEDLDAE 241
Query: 1258 LEKYHKESME 1229
LEKYH E+M+
Sbjct: 242 LEKYHAEAMQ 251
>ref|XP_004143092.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus] gi|449508143|ref|XP_004163231.1| PREDICTED: RNA
and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 221 bits (563), Expect = 1e-54
Identities = 130/246 (52%), Positives = 150/246 (60%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAWKH 1781
A LDM+LDD+IK NKK +ANR PYSA KAPE+ W+H
Sbjct: 3 APLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRT-PYSAPKAPETTWQH 61
Query: 1780 DMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTIH 1601
DMF+ + G+ Q G RAS+I+TGTKLYISNLDYGVSNED+KELFSEVGD+KR IH
Sbjct: 62 DMFADPSS--GFLVQGG--RASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIH 117
Query: 1600 YDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXXX 1421
YD+SGRSKGTAEVVFSRR DA+AAVK+YNNVQLDGKPMKI+IVGTN+
Sbjct: 118 YDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNP 177
Query: 1420 XXXXXGVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKYHK 1241
G PR Q EK+SAEDLDADLEKYH
Sbjct: 178 FENSNGAPRRQQ------GRGGPPSRQRGHGFGRGRGRGRGPSEKVSAEDLDADLEKYHA 231
Query: 1240 ESMEIS 1223
ESM+I+
Sbjct: 232 ESMQIN 237
>ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer arietinum]
Length = 257
Score = 219 bits (558), Expect = 4e-54
Identities = 129/258 (50%), Positives = 154/258 (59%), Gaps = 12/258 (4%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSAAKAPESAWKH 1781
AALDMTL+D+IK NKK +N AAPYSAAKAPE+ W+H
Sbjct: 3 AALDMTLEDIIKNNKKSGSGNPRGRSRPGPGPARRLPNRV-SNHAAPYSAAKAPETTWQH 61
Query: 1780 DMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTIH 1601
D+++ DQ + + A G RA SIETGTKLYISNLDY VSN+D+KELFSEVGDLKR +H
Sbjct: 62 DLYA-DQPVAAAAYSAQGGRAPSIETGTKLYISNLDYAVSNDDIKELFSEVGDLKRHGVH 120
Query: 1600 YDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXXX 1421
YDRSGRSKGTAEVVFSRRQDA+AAVKRYNNVQLDGKPMKI+IVGTN +
Sbjct: 121 YDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTN-ISTPGVAPAVNGA 179
Query: 1420 XXXXXGVPRSAQ------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISA 1277
G+P+S Q +K+SA
Sbjct: 180 IGNFNGIPQSGQGRGGALRGPGGRGQGIRRNQGRGRGSGGGRGGGRGGGRGGGRDQKVSA 239
Query: 1276 EDLDADLEKYHKESMEIS 1223
EDLDA+LE+YH E+M+I+
Sbjct: 240 EDLDAELERYHAEAMQIN 257
>gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus notabilis]
Length = 248
Score = 217 bits (552), Expect = 2e-53
Identities = 134/246 (54%), Positives = 152/246 (61%), Gaps = 4/246 (1%)
Frame = -3
Query: 1954 LDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSA-NRAAPYSAA-KAPESAWKH 1781
L M+LDD+IK NKK A NRAAPY+AA KAPE+ W+H
Sbjct: 5 LSMSLDDIIKTNKKTGSGNPRGRGRLSGGPGPARRVPNRAPNRAAPYAAAPKAPETTWQH 64
Query: 1780 DMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTIH 1601
DM+ DQ ++AQAG RAS+I+TGTKLYISNL+YGVSNED+KELFSEVGDLKR IH
Sbjct: 65 DMYM-DQGTA-FAAQAG--RASAIQTGTKLYISNLEYGVSNEDIKELFSEVGDLKRYAIH 120
Query: 1600 YDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXXX 1421
YDRSGRSKGTAEVVFSRR DA+AAVKRYNNVQLDGKPMKI+IVGTNV
Sbjct: 121 YDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNVATPAAPPPPANGS 180
Query: 1420 XXXXXGVPRSAQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKY 1247
G+PR Q GEKISA+DLDADLEKY
Sbjct: 181 FGNSNGLPRGGQGRGGGAFGRPRGGGGGGRGPRRGRGRGQGRGTGEKISADDLDADLEKY 240
Query: 1246 HKESME 1229
H E+M+
Sbjct: 241 HAEAMQ 246
>gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]
Length = 240
Score = 216 bits (551), Expect = 2e-53
Identities = 131/243 (53%), Positives = 147/243 (60%), Gaps = 1/243 (0%)
Frame = -3
Query: 1954 LDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXSANRAAPYSA-AKAPESAWKHD 1778
LDM+LDDLIK N+K ANR APYS +AP++ W+HD
Sbjct: 5 LDMSLDDLIKSNRKSGLTRTRPPLNSGNGPSRRFPNRA-ANRTAPYSKPVQAPDTTWQHD 63
Query: 1777 MFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRCTIHY 1598
MF D A G+ + AG RASSIETGTKLYISNLDYGVSNED+KELFSEVGD+KR ++HY
Sbjct: 64 MFVDDGA--GFPSAAG--RASSIETGTKLYISNLDYGVSNEDIKELFSEVGDMKRYSVHY 119
Query: 1597 DRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXXXXXX 1418
DRSGRSKGTAEVVFSRR DA A KRYN VQLDGKPMKI+IVGTNV
Sbjct: 120 DRSGRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMKIEIVGTNVATPVALPPATNGKF 179
Query: 1417 XXXXGVPRSAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLEKYHKE 1238
GVPRS Q GEK+SAEDLDADLE YHKE
Sbjct: 180 ANPNGVPRSGQ----GRGSFSGRSRGPGRGARRGRGQGRGQGEKVSAEDLDADLENYHKE 235
Query: 1237 SME 1229
+M+
Sbjct: 236 AMQ 238
>ref|XP_003606654.1| THO complex subunit [Medicago truncatula] gi|355507709|gb|AES88851.1|
THO complex subunit [Medicago truncatula]
Length = 376
Score = 209 bits (533), Expect = 3e-51
Identities = 116/216 (53%), Positives = 136/216 (62%), Gaps = 12/216 (5%)
Frame = -3
Query: 1834 NRAAPYSAAKAPESAWKHDMFSSDQAIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNE 1655
NRAAPYSAAKAPE+ W+HD+++ A G RA SIETGTKLYISNLDYGVSN+
Sbjct: 162 NRAAPYSAAKAPETTWQHDLYADQHVAAAAYPAAQGGRAPSIETGTKLYISNLDYGVSND 221
Query: 1654 DVKELFSEVGDLKRCTIHYDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDI 1475
D+KELFSEVGDLKR +HYDRSGRSKGTAEVVFSRRQDA+AAVKRYNNVQLDGKPMKI+I
Sbjct: 222 DIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEI 281
Query: 1474 VGTNVVXXXXXXXXXXXXXXXXXGVPRSAQ------------XXXXXXXXXXXXXXXXXX 1331
VGTN + G+P+S Q
Sbjct: 282 VGTN-ISTPGAAPVVNAPIGNFNGIPQSGQGRVGEFRGPGGRGQGIRRNRGRGRGSGGPR 340
Query: 1330 XXXXXXXXXXXXGEKISAEDLDADLEKYHKESMEIS 1223
+K+SAEDLDA+LEKYH E+M+++
Sbjct: 341 GGGRGGGRGRGRDDKVSAEDLDAELEKYHAEAMQLN 376
>gb|ESW04085.1| hypothetical protein PHAVU_011G066000g [Phaseolus vulgaris]
Length = 234
Score = 209 bits (532), Expect = 4e-51
Identities = 128/250 (51%), Positives = 153/250 (61%), Gaps = 4/250 (1%)
Frame = -3
Query: 1960 AALDMTLDDLIKQNKKXXXXXXXXXXXXXXXXXXXXXXXXS--ANRAAPYSAAKAPESAW 1787
AALD+TLDD+IK NKK S ANRAAPY+AA A ++ W
Sbjct: 3 AALDLTLDDIIKNNKKSGSGNFRGQNRSSGSGPGPSRRFPSRVANRAAPYAAANA-DATW 61
Query: 1786 KHDMFSSDQ-AIGGYSAQAGGSRASSIETGTKLYISNLDYGVSNEDVKELFSEVGDLKRC 1610
KH++++ A GYSA+ G ASSIETGTKL+ISNLDYGVSN+D+KELFSEVGD+KR
Sbjct: 62 KHNLYADQYVAAAGYSARGGF--ASSIETGTKLFISNLDYGVSNDDIKELFSEVGDMKRH 119
Query: 1609 TIHYDRSGRSKGTAEVVFSRRQDAMAAVKRYNNVQLDGKPMKIDIVGTNVVXXXXXXXXX 1430
+HYDRSGRSKGTAEVVFSRR DA+AAVKRYNNVQLDGKPMKI+I G N+
Sbjct: 120 GVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIAGANI---------- 169
Query: 1429 XXXXXXXXGVPRSAQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKISAEDLDADLE 1253
GVPRS Q +K+SA+DLDADLE
Sbjct: 170 -----STPGVPRSGQGRNGALRKPGGRGQGMQRDRGQGRGHGGGRRDDKLSADDLDADLE 224
Query: 1252 KYHKESMEIS 1223
KYH E+M+++
Sbjct: 225 KYHAEAMQLN 234