BLASTX nr result

ID: Catharanthus23_contig00001172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00001172
         (846 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16538.3| unnamed protein product [Vitis vinifera]               62   2e-07
ref|XP_002285727.1| PREDICTED: arabinogalactan peptide 14-like [...    60   8e-07

>emb|CBI16538.3| unnamed protein product [Vitis vinifera]
          Length = 147

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 51/150 (34%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
 Frame = -3

Query: 745 LPCDPLSSNGLFGQQPL-------LPVIPRLYNPTTSSGNQTT*KSVHCXXXXXXXXLIA 587
           LPC P+   G  GQ  +       LP+ P   NPT    +  T               + 
Sbjct: 5   LPCHPVQPLGQVGQSTIHLPARNSLPLSPPYINPTIFPMSPPT--------DYVSAIPLC 56

Query: 586 IVVLRQFRNSISLLSFYLHLFA----------MEAMKVKLFVAVIMMLMALSAVQNXXXX 437
             +    RN  +  +  L++F           MEAMK+KLF+AV+MM++A+SAVQ     
Sbjct: 57  KTLAFPKRNRRASPNSPLYIFIIFRETAKQKEMEAMKMKLFLAVVMMILAVSAVQPAAAA 116

Query: 436 XXXXXXXXXXXSIFVPTAFASLTALAFGML 347
                      +IFVPT FASLTALAFG L
Sbjct: 117 TAPAPAPASDAAIFVPTFFASLTALAFGFL 146


>ref|XP_002285727.1| PREDICTED: arabinogalactan peptide 14-like [Vitis vinifera]
          Length = 59

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 33/58 (56%), Positives = 40/58 (68%)
 Frame = -3

Query: 520 MEAMKVKLFVAVIMMLMALSAVQNXXXXXXXXXXXXXXXSIFVPTAFASLTALAFGML 347
           MEAMK+KLF+AV+MM++A+SAVQ                +IFVPT FASLTALAFG L
Sbjct: 1   MEAMKMKLFLAVVMMILAVSAVQPAAAATAPAPAPASDAAIFVPTFFASLTALAFGFL 58


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