BLASTX nr result
ID: Catharanthus23_contig00001046
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00001046
(355 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349277.1| PREDICTED: survival of motor neuron-related-... 77 3e-12
ref|XP_006431438.1| hypothetical protein CICLE_v10002025mg [Citr... 76 5e-12
ref|XP_004230413.1| PREDICTED: survival of motor neuron-related-... 76 5e-12
ref|XP_006291679.1| hypothetical protein CARUB_v10017839mg [Caps... 75 9e-12
ref|XP_006291678.1| hypothetical protein CARUB_v10017839mg [Caps... 75 9e-12
ref|XP_006291677.1| hypothetical protein CARUB_v10017839mg [Caps... 75 9e-12
ref|XP_002328804.1| predicted protein [Populus trichocarpa] gi|5... 75 1e-11
ref|XP_006395773.1| hypothetical protein EUTSA_v10004677mg [Eutr... 74 2e-11
ref|XP_004167806.1| PREDICTED: survival of motor neuron-related-... 73 5e-11
ref|XP_004142808.1| PREDICTED: survival of motor neuron-related-... 73 5e-11
gb|EOY25771.1| Nucleic acid binding,RNA binding isoform 2 [Theob... 72 6e-11
gb|EOY25770.1| Nucleic acid binding,RNA binding isoform 1 [Theob... 72 6e-11
ref|XP_002269518.2| PREDICTED: survival of motor neuron-related-... 71 1e-10
ref|XP_002876824.1| nucleic acid binding protein [Arabidopsis ly... 71 1e-10
ref|NP_001030955.1| nucleic acid binding/RNA binding protein [Ar... 71 2e-10
ref|NP_178361.2| nucleic acid binding/RNA binding protein [Arabi... 71 2e-10
dbj|BAH56997.1| AT2G02570 [Arabidopsis thaliana] 71 2e-10
ref|XP_002527827.1| survival motor neuron protein, putative [Ric... 70 2e-10
gb|EXB80406.1| Survival of motor neuron-related-splicing factor ... 70 3e-10
gb|AFK41014.1| unknown [Lotus japonicus] 70 3e-10
>ref|XP_006349277.1| PREDICTED: survival of motor neuron-related-splicing factor 30-like
[Solanum tuberosum]
Length = 299
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = -3
Query: 149 MQSGTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
MQSG +EVS+EELASNLSTYKEQL+QVR++L EP NSEY+DMEKEL+E
Sbjct: 1 MQSG-DEVSIEELASNLSTYKEQLQQVRQLLHDEPDNSEYIDMEKELVE 48
>ref|XP_006431438.1| hypothetical protein CICLE_v10002025mg [Citrus clementina]
gi|568833281|ref|XP_006470830.1| PREDICTED: survival of
motor neuron-related-splicing factor 30-like isoform X1
[Citrus sinensis] gi|557533560|gb|ESR44678.1|
hypothetical protein CICLE_v10002025mg [Citrus
clementina]
Length = 295
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = -3
Query: 140 GTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
G EE+S+EEL SNLSTYKEQL+QVRE+L H+PGNSEY DMEKEL E
Sbjct: 3 GGEELSIEELFSNLSTYKEQLQQVRELLVHDPGNSEYADMEKELSE 48
>ref|XP_004230413.1| PREDICTED: survival of motor neuron-related-splicing factor 30-like
[Solanum lycopersicum]
Length = 299
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = -3
Query: 149 MQSGTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
MQSG +EVS+EELASNLSTYKEQL+QVR++L EP NSEY+DMEKEL E
Sbjct: 1 MQSG-DEVSIEELASNLSTYKEQLQQVRQLLHDEPDNSEYIDMEKELAE 48
>ref|XP_006291679.1| hypothetical protein CARUB_v10017839mg [Capsella rubella]
gi|482560386|gb|EOA24577.1| hypothetical protein
CARUB_v10017839mg [Capsella rubella]
Length = 269
Score = 75.1 bits (183), Expect = 9e-12
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -3
Query: 149 MQSGTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
M+ G EEVS+EELASNLSTYKEQL+QVR++L +P N+EY DMEKEL E
Sbjct: 1 MEGGVEEVSIEELASNLSTYKEQLDQVRQLLSEDPRNAEYADMEKELKE 49
>ref|XP_006291678.1| hypothetical protein CARUB_v10017839mg [Capsella rubella]
gi|482560385|gb|EOA24576.1| hypothetical protein
CARUB_v10017839mg [Capsella rubella]
Length = 244
Score = 75.1 bits (183), Expect = 9e-12
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -3
Query: 149 MQSGTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
M+ G EEVS+EELASNLSTYKEQL+QVR++L +P N+EY DMEKEL E
Sbjct: 1 MEGGVEEVSIEELASNLSTYKEQLDQVRQLLSEDPRNAEYADMEKELKE 49
>ref|XP_006291677.1| hypothetical protein CARUB_v10017839mg [Capsella rubella]
gi|482560384|gb|EOA24575.1| hypothetical protein
CARUB_v10017839mg [Capsella rubella]
Length = 221
Score = 75.1 bits (183), Expect = 9e-12
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -3
Query: 149 MQSGTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
M+ G EEVS+EELASNLSTYKEQL+QVR++L +P N+EY DMEKEL E
Sbjct: 1 MEGGVEEVSIEELASNLSTYKEQLDQVRQLLSEDPRNAEYADMEKELKE 49
>ref|XP_002328804.1| predicted protein [Populus trichocarpa]
gi|566168331|ref|XP_006385091.1| hypothetical protein
POPTR_0004s23810g [Populus trichocarpa]
gi|118483337|gb|ABK93570.1| unknown [Populus
trichocarpa] gi|550341859|gb|ERP62888.1| hypothetical
protein POPTR_0004s23810g [Populus trichocarpa]
Length = 287
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/44 (79%), Positives = 41/44 (93%)
Frame = -3
Query: 134 EEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
EEVS+EELASNLSTYKEQL QVR++L +PGNSEY+DMEKEL+E
Sbjct: 4 EEVSIEELASNLSTYKEQLHQVRQLLVDDPGNSEYVDMEKELIE 47
>ref|XP_006395773.1| hypothetical protein EUTSA_v10004677mg [Eutrema salsugineum]
gi|557092412|gb|ESQ33059.1| hypothetical protein
EUTSA_v10004677mg [Eutrema salsugineum]
Length = 301
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -3
Query: 149 MQSGTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
M+ G EEVS++ELASNL+TYKEQLEQVR++L +P NSEY DMEKEL E
Sbjct: 1 MEGGEEEVSIKELASNLTTYKEQLEQVRQLLSEDPRNSEYADMEKELKE 49
>ref|XP_004167806.1| PREDICTED: survival of motor neuron-related-splicing factor
30-like, partial [Cucumis sativus]
Length = 116
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = -3
Query: 140 GTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
G E+VS+EELA+NLSTYK+QL QVR++L+ +PGNSEY+DMEKEL E
Sbjct: 3 GGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEE 48
>ref|XP_004142808.1| PREDICTED: survival of motor neuron-related-splicing factor 30-like
isoform 1 [Cucumis sativus]
Length = 299
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = -3
Query: 140 GTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
G E+VS+EELA+NLSTYK+QL QVR++L+ +PGNSEY+DMEKEL E
Sbjct: 3 GGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEE 48
>gb|EOY25771.1| Nucleic acid binding,RNA binding isoform 2 [Theobroma cacao]
Length = 291
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -3
Query: 140 GTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
G +E+S+EELASNLSTYKEQL+QVR+IL +PGN EY+DMEKEL E
Sbjct: 3 GEDELSIEELASNLSTYKEQLQQVRQILVDDPGNLEYVDMEKELAE 48
>gb|EOY25770.1| Nucleic acid binding,RNA binding isoform 1 [Theobroma cacao]
Length = 375
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -3
Query: 140 GTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
G +E+S+EELASNLSTYKEQL+QVR+IL +PGN EY+DMEKEL E
Sbjct: 3 GEDELSIEELASNLSTYKEQLQQVRQILVDDPGNLEYVDMEKELAE 48
>ref|XP_002269518.2| PREDICTED: survival of motor neuron-related-splicing factor 30-like
[Vitis vinifera]
Length = 301
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = -3
Query: 140 GTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
G EE+S++ELASNLSTYK+QL+QVR++L +PGNSEY+DMEKEL E
Sbjct: 3 GGEELSIDELASNLSTYKDQLQQVRKLLVDDPGNSEYVDMEKELEE 48
>ref|XP_002876824.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297322662|gb|EFH53083.1| nucleic acid binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -3
Query: 149 MQSGTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
M+ G EE+S+E LASNLSTYKEQLEQVR++L +P N EY DMEKEL E
Sbjct: 1 MEGGVEELSIEVLASNLSTYKEQLEQVRQLLSEDPRNLEYADMEKELKE 49
>ref|NP_001030955.1| nucleic acid binding/RNA binding protein [Arabidopsis thaliana]
gi|330250505|gb|AEC05599.1| nucleic acid binding/RNA
binding protein [Arabidopsis thaliana]
Length = 288
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = -3
Query: 149 MQSGTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
M G EE+S+E+LAS++STYKEQLEQVR++L +P NSEY DMEKEL E
Sbjct: 1 MVGGVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKE 49
>ref|NP_178361.2| nucleic acid binding/RNA binding protein [Arabidopsis thaliana]
gi|30678012|ref|NP_849927.1| nucleic acid binding/RNA
binding protein [Arabidopsis thaliana]
gi|145328250|ref|NP_001077871.1| nucleic acid
binding/RNA binding protein [Arabidopsis thaliana]
gi|27754612|gb|AAO22752.1| unknown protein [Arabidopsis
thaliana] gi|28393903|gb|AAO42359.1| unknown protein
[Arabidopsis thaliana] gi|330250503|gb|AEC05597.1|
nucleic acid binding/RNA binding protein [Arabidopsis
thaliana] gi|330250504|gb|AEC05598.1| nucleic acid
binding/RNA binding protein [Arabidopsis thaliana]
gi|330250506|gb|AEC05600.1| nucleic acid binding/RNA
binding protein [Arabidopsis thaliana]
Length = 300
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = -3
Query: 149 MQSGTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
M G EE+S+E+LAS++STYKEQLEQVR++L +P NSEY DMEKEL E
Sbjct: 1 MVGGVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKE 49
>dbj|BAH56997.1| AT2G02570 [Arabidopsis thaliana]
Length = 83
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = -3
Query: 149 MQSGTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
M G EE+S+E+LAS++STYKEQLEQVR++L +P NSEY DMEKEL E
Sbjct: 1 MVGGVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKE 49
>ref|XP_002527827.1| survival motor neuron protein, putative [Ricinus communis]
gi|223532751|gb|EEF34530.1| survival motor neuron
protein, putative [Ricinus communis]
Length = 57
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = -3
Query: 140 GTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
G EEVS+EELASNLSTYK+QL QVRE+L +P NSEY DMEKEL E
Sbjct: 3 GGEEVSIEELASNLSTYKQQLHQVRELLVDDPYNSEYADMEKELKE 48
>gb|EXB80406.1| Survival of motor neuron-related-splicing factor 30 [Morus
notabilis]
Length = 302
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
Frame = -3
Query: 149 MQSGT--EEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
MQ G EEVSVEELASNLSTYK+QL QV+++L +PGNSEY DME+EL E
Sbjct: 1 MQGGDVGEEVSVEELASNLSTYKDQLHQVKQLLADDPGNSEYADMERELNE 51
>gb|AFK41014.1| unknown [Lotus japonicus]
Length = 301
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/46 (69%), Positives = 41/46 (89%)
Frame = -3
Query: 140 GTEEVSVEELASNLSTYKEQLEQVREILEHEPGNSEYLDMEKELLE 3
G++EVS+EELASNLSTYK+QL QVR++L +P NSEY+DME+EL E
Sbjct: 5 GSDEVSIEELASNLSTYKDQLYQVRQLLNDDPSNSEYVDMERELRE 50