BLASTX nr result
ID: Catharanthus23_contig00000114
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00000114
(1185 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 310 1e-81
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai... 304 4e-80
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 303 9e-80
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox... 303 9e-80
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 303 1e-79
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 302 2e-79
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 301 3e-79
sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox... 300 8e-79
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 299 1e-78
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 298 4e-78
ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase... 297 5e-78
gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 297 6e-78
gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 296 8e-78
gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 296 8e-78
ref|XP_002531624.1| Ribulose bisphosphate carboxylase small chai... 296 8e-78
sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carbo... 296 1e-77
gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 295 3e-77
sp|Q39744.1|RBS2_FLAPR RecName: Full=Ribulose bisphosphate carbo... 294 5e-77
gb|EOY04196.1| Ribulose bisphosphate carboxylase (small chain) f... 294 5e-77
gb|EMJ16250.1| hypothetical protein PRUPE_ppa012123mg [Prunus pe... 293 1e-76
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 310 bits (793), Expect = 1e-81
Identities = 145/168 (86%), Positives = 160/168 (95%), Gaps = 1/168 (0%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 567
NRASPAQASMVAPFTGLKSTSAFPVTRK +DIT+LA+NGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFETL 74
Query: 566 SYLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF 387
SYLP+L+ EQLA+EV+YLLR+GWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF
Sbjct: 75 SYLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF 134
Query: 386 GCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
GC+D+ QVLKEL+EA K YPN+F+RIIGFDNVRQVQCISFIAYKP +
Sbjct: 135 GCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKPPSF 182
>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
precursor, putative [Ricinus communis]
gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
carboxylase small chain 1B, chloroplast precursor,
putative [Ricinus communis]
Length = 181
Score = 304 bits (779), Expect = 4e-80
Identities = 142/168 (84%), Positives = 159/168 (94%), Gaps = 1/168 (0%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 567
+R+SPAQA+MVAPFTGLKS ++FPVTRK +DITS+ASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 12 SRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQVWPPLGKKKFETL 71
Query: 566 SYLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF 387
SYLP+L+ EQLA+EVDYLLR+GW+PCLEFELEHGFVYREN RSPGYYDGRYWTMWKLPMF
Sbjct: 72 SYLPDLTDEQLAKEVDYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMF 131
Query: 386 GCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
GC+DS QVLKEL+EAKK YPN+FIRIIGFDN RQVQCISFIAYKPT +
Sbjct: 132 GCSDSTQVLKELDEAKKAYPNSFIRIIGFDNRRQVQCISFIAYKPTTF 179
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 303 bits (776), Expect = 9e-80
Identities = 142/164 (86%), Positives = 152/164 (92%)
Frame = -2
Query: 737 ASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLSYL 558
++PAQA MVAPFTGLKS+SAFPVTRK +DITS+ASNGGRVQCMQVWPPLG KK+ETLSYL
Sbjct: 15 SAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYL 74
Query: 557 PELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCN 378
P LS E LA+EVDYLLR+ WVPCLEFELEHGFVYREN RSPGYYDGRYWTMWKLPMFGC
Sbjct: 75 PPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCT 134
Query: 377 DSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTG 246
DS+QVLKELEEAKK YP +FIRIIGFDNVRQVQCISFIAYKP G
Sbjct: 135 DSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPPG 178
>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
carboxylase [Malus sp.]
Length = 183
Score = 303 bits (776), Expect = 9e-80
Identities = 142/167 (85%), Positives = 153/167 (91%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 564
+R +PAQA MVAPFTGLKS+SA PVTRK +DITS+ASNGGRVQCMQVWPPLG KK+ETLS
Sbjct: 17 DRPAPAQARMVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLS 76
Query: 563 YLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 384
YLP LS E LA+EVDYLLR+ WVPCLEFELEHGFVYREN RSPGYYDGRYWTMWKLPMFG
Sbjct: 77 YLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFG 136
Query: 383 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
C DS+QVLKELEEAKK YP +FIRIIGFDNVRQVQCISFIAYKP G+
Sbjct: 137 CTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183
>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 179
Score = 303 bits (775), Expect = 1e-79
Identities = 145/167 (86%), Positives = 153/167 (91%), Gaps = 1/167 (0%)
Frame = -2
Query: 740 RASPAQASMVAPFTGLKSTSAFPVTRKES-DITSLASNGGRVQCMQVWPPLGKKKYETLS 564
RA+PAQA+MVAPFTGLKS SAFPVTRK S DITSL+SNGGRVQCMQVWPP+GKKK+ETLS
Sbjct: 13 RATPAQATMVAPFTGLKSASAFPVTRKSSEDITSLSSNGGRVQCMQVWPPIGKKKFETLS 72
Query: 563 YLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 384
YLP LS E LA+EVDYLLR GWVPCLEFELEHGFVYRE+ SPGYYDGRYWTMWKLPMFG
Sbjct: 73 YLPPLSPESLAKEVDYLLRSGWVPCLEFELEHGFVYREHHSSPGYYDGRYWTMWKLPMFG 132
Query: 383 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
C DSAQVLKELEEAKK YP AFIRIIGFDN RQVQCISFIAYKP G+
Sbjct: 133 CTDSAQVLKELEEAKKAYPTAFIRIIGFDNKRQVQCISFIAYKPPGF 179
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 302 bits (773), Expect = 2e-79
Identities = 141/164 (85%), Positives = 154/164 (93%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 564
+RA+PAQASMVAPFTGLKST+AFPVTRK +DITSL SNGGRVQCM+VWPPLG KK+ETLS
Sbjct: 15 SRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLS 74
Query: 563 YLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 384
YLP L+ E+LA+EVDYLLR GWVPCLEFELEHG+VYREN RSPGYYDGRYWTMWKLPMFG
Sbjct: 75 YLPPLTNEELAKEVDYLLRSGWVPCLEFELEHGWVYRENHRSPGYYDGRYWTMWKLPMFG 134
Query: 383 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKP 252
C DS+QVL E+EE KKEYPNAFIRIIGFDNVRQVQCISFIA+KP
Sbjct: 135 CTDSSQVLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAFKP 178
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 301 bits (771), Expect = 3e-79
Identities = 140/164 (85%), Positives = 154/164 (93%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 564
+RA PAQASMVAPFTGLKST+AFPVTRK +DITSL SNGGRVQCM+VWPPLG KK+ETLS
Sbjct: 15 SRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLS 74
Query: 563 YLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 384
YLP+L+ EQL++EVDYLLR GWVPCLEFELEHGFVYRE+ SPGYYDGRYWTMWKLPMFG
Sbjct: 75 YLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFG 134
Query: 383 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKP 252
C DS+QVLKE+EE KKEYPNA+IRIIGFDNVRQVQCISFIA+KP
Sbjct: 135 CTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178
>sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|218021|dbj|BAA00450.1| RuBisCO small
subunit [Pyrus pyrifolia var. culta]
Length = 183
Score = 300 bits (768), Expect = 8e-79
Identities = 141/167 (84%), Positives = 152/167 (91%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 564
+R +PAQA MVAPF GLKS+SAFPVTRK +DITS+ASNGGRVQCMQVWPPLG KK+ETLS
Sbjct: 17 DRPAPAQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLS 76
Query: 563 YLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 384
YLP LS E LA+EVDYLLR+ WVPCLEFELE GFVYREN RSPGYYDGRYWTMWKLPMFG
Sbjct: 77 YLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFG 136
Query: 383 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
C DS+QVLKELEEAKK YP +FIRIIGFDNVRQVQCISFIAYKP G+
Sbjct: 137 CTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183
>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
[Corchorus olitorius]
Length = 183
Score = 299 bits (766), Expect = 1e-78
Identities = 141/168 (83%), Positives = 154/168 (91%), Gaps = 1/168 (0%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRKES-DITSLASNGGRVQCMQVWPPLGKKKYETL 567
NRASPAQA++VAPFTGLKS SAFP TRK + DITS+ASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 13 NRASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQVWPPLGKKKFETL 72
Query: 566 SYLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF 387
SYLP+L+ QLA+EVDYLLR GW+PCLEFELEHGFVYRE+ SPGYYDGRYWTMWKLPMF
Sbjct: 73 SYLPDLTPVQLAKEVDYLLRSGWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMF 132
Query: 386 GCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
GC DS+QVLKELEEAKK YP+AFIRIIGFDN RQVQCISFIAYKP +
Sbjct: 133 GCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQCISFIAYKPPSF 180
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 298 bits (762), Expect = 4e-78
Identities = 138/167 (82%), Positives = 150/167 (89%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 564
NRASPAQASMVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPP+GKKK+ETLS
Sbjct: 15 NRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQVWPPIGKKKFETLS 74
Query: 563 YLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 384
YLP LS E+L +E++YLLR WVPCLEFELE GFVYR+N +SPGYYDGRYWTMWKLPMFG
Sbjct: 75 YLPPLSREELLKEIEYLLRMNWVPCLEFELEKGFVYRDNHKSPGYYDGRYWTMWKLPMFG 134
Query: 383 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
C D QV KEL+EA K YPNAF+RIIGFDN RQVQCISFIAYKP G+
Sbjct: 135 CTDPLQVFKELDEAIKTYPNAFVRIIGFDNKRQVQCISFIAYKPPGF 181
>ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 182
Score = 297 bits (761), Expect = 5e-78
Identities = 142/166 (85%), Positives = 151/166 (90%), Gaps = 1/166 (0%)
Frame = -2
Query: 737 ASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETLSY 561
ASPAQASMVAPFTGLKS SAFP+TRK SDITSL SNGGRVQCMQVWPP+G KK+ETLSY
Sbjct: 17 ASPAQASMVAPFTGLKSASAFPITRKTNSDITSLPSNGGRVQCMQVWPPVGLKKFETLSY 76
Query: 560 LPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGC 381
LP L+ E LA+EVD+LLR WVPCLEFELE GFVYREN +SPGYYDGRYWTMWKLPMFGC
Sbjct: 77 LPPLTSESLAKEVDFLLRNKWVPCLEFELEKGFVYRENHKSPGYYDGRYWTMWKLPMFGC 136
Query: 380 NDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
D++QVLKELEEAKK YPNAFIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 137 TDASQVLKELEEAKKAYPNAFIRIIGFDNVRQVQCISFIAYKPAGY 182
>gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium raimondii]
Length = 182
Score = 297 bits (760), Expect = 6e-78
Identities = 142/168 (84%), Positives = 153/168 (91%), Gaps = 1/168 (0%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 567
NR+SPAQA+MVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 566 SYLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF 387
SYLP+L+ QLA+EVDYLLR W+PCLEFELE GFV+R+ + P YYDGRYWTMWKLPMF
Sbjct: 75 SYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSNLPTYYDGRYWTMWKLPMF 134
Query: 386 GCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
GC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 135 GCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPEGY 182
>gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium tomentosum]
Length = 182
Score = 296 bits (759), Expect = 8e-78
Identities = 142/168 (84%), Positives = 153/168 (91%), Gaps = 1/168 (0%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 567
NR+SPAQA+MVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 566 SYLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF 387
SYLP+L+ QLA+EVDYLLR W+PCLEFELE GFV+R+ + P YYDGRYWTMWKLPMF
Sbjct: 75 SYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMF 134
Query: 386 GCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
GC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 135 GCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKGY 182
>gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366462|gb|AFS41728.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366476|gb|AFS41735.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium barbadense]
gi|406366492|gb|AFS41743.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium tomentosum] gi|406366506|gb|AFS41750.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
gi|406366520|gb|AFS41757.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 182
Score = 296 bits (759), Expect = 8e-78
Identities = 142/168 (84%), Positives = 153/168 (91%), Gaps = 1/168 (0%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 567
NR+SPAQA+MVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 566 SYLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF 387
SYLP+L+ QLA+EVDYLLR W+PCLEFELE GFV+R+ + P YYDGRYWTMWKLPMF
Sbjct: 75 SYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMF 134
Query: 386 GCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
GC DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 135 GCTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPEGY 182
>ref|XP_002531624.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528742|gb|EEF30752.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 180
Score = 296 bits (759), Expect = 8e-78
Identities = 142/168 (84%), Positives = 155/168 (92%), Gaps = 1/168 (0%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRKES-DITSLASNGGRVQCMQVWPPLGKKKYETL 567
NRA+P QASMVAPFTGLKS+S FPVTRK++ DIT+LASNGG+V CMQVWPP+GKKK+ETL
Sbjct: 14 NRAAP-QASMVAPFTGLKSSSVFPVTRKQNNDITTLASNGGKVHCMQVWPPVGKKKFETL 72
Query: 566 SYLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF 387
SYLP LS E LA+EVDYLLR GWVPCLEFELEHGFVYREN RSPGYYDGR WTMWKLPMF
Sbjct: 73 SYLPPLSEESLAKEVDYLLRMGWVPCLEFELEHGFVYRENHRSPGYYDGRCWTMWKLPMF 132
Query: 386 GCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
GC DS+QVLKELEEAKK YPN+FIRIIGFDN RQVQCISFIAYKP+G+
Sbjct: 133 GCTDSSQVLKELEEAKKAYPNSFIRIIGFDNKRQVQCISFIAYKPSGF 180
>sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor gi|967225|gb|AAB67848.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 178
Score = 296 bits (758), Expect = 1e-77
Identities = 137/167 (82%), Positives = 152/167 (91%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 564
+RA+PAQA+MVAPFTGLKS +AFP T+K +D ++L SNGGRVQCM+VWPPLGKKKYETLS
Sbjct: 12 SRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPSNGGRVQCMKVWPPLGKKKYETLS 71
Query: 563 YLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 384
YLP L+ QLA+EVDYLLR WVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG
Sbjct: 72 YLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 131
Query: 383 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
C DSAQV+KEL+E KKEYP A+IRIIGFDNVRQVQCISFIA KP G+
Sbjct: 132 CTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPDGF 178
>gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366478|gb|AFS41736.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366508|gb|AFS41751.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
Length = 182
Score = 295 bits (754), Expect = 3e-77
Identities = 141/168 (83%), Positives = 152/168 (90%), Gaps = 1/168 (0%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 567
NR+SPAQA+MVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 566 SYLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF 387
SYLP+L+ QLA+EVDYLLR W+PCLEFELE GFV+R+ + P YYDGRYWTMWKLPMF
Sbjct: 75 SYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMF 134
Query: 386 GCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
GC DSAQVLKELE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 135 GCTDSAQVLKELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKGY 182
>sp|Q39744.1|RBS2_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|967221|gb|AAB67846.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 178
Score = 294 bits (752), Expect = 5e-77
Identities = 136/167 (81%), Positives = 151/167 (90%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 564
+RA+PAQA+MVAPFTGLKS AFP T+K +D ++L SNGGRVQCM+VWPPLGKK+YETLS
Sbjct: 12 SRAAPAQANMVAPFTGLKSNVAFPATKKANDFSTLPSNGGRVQCMKVWPPLGKKRYETLS 71
Query: 563 YLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 384
YLP L+ QLA+EVDYLLR WVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG
Sbjct: 72 YLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 131
Query: 383 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
C DSAQV+KEL+E KKEYP A+IRIIGFDNVRQVQCISFIA KP G+
Sbjct: 132 CTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPEGF 178
>gb|EOY04196.1| Ribulose bisphosphate carboxylase (small chain) family protein
isoform 2 [Theobroma cacao]
Length = 184
Score = 294 bits (752), Expect = 5e-77
Identities = 141/168 (83%), Positives = 151/168 (89%), Gaps = 1/168 (0%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 567
NRASPAQASMVAPFTGLKSTSA PV RK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRASPAQASMVAPFTGLKSTSALPVARKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 566 SYLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMF 387
SYLP+L+ E+L +EV+YLLR WVPCLEFELEHGFVYREN R PGYYDGR W MWKLPMF
Sbjct: 75 SYLPDLTRERLFKEVEYLLRNKWVPCLEFELEHGFVYRENLRIPGYYDGRCWIMWKLPMF 134
Query: 386 GCNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
GC D++QVLKEL+EAKK YP AFIRIIGFDN RQVQCISFIAYKP GY
Sbjct: 135 GCTDASQVLKELDEAKKTYPTAFIRIIGFDNRRQVQCISFIAYKPPGY 182
>gb|EMJ16250.1| hypothetical protein PRUPE_ppa012123mg [Prunus persica]
Length = 183
Score = 293 bits (749), Expect = 1e-76
Identities = 138/167 (82%), Positives = 151/167 (90%)
Frame = -2
Query: 743 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 564
+RA+PAQAS+VAPFTGLKS SAFP +K +DITS+ASNGGRVQCM+VWP +G KK+ETLS
Sbjct: 17 DRAAPAQASLVAPFTGLKSASAFPGAKKTNDITSIASNGGRVQCMKVWPTVGLKKFETLS 76
Query: 563 YLPELSLEQLAREVDYLLRQGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 384
YLP LS E LA+EVDYLLR+ WVPCLEFELE GFVYREN RSPGYYDGRYWTMWKLPMFG
Sbjct: 77 YLPPLSPESLAKEVDYLLRKNWVPCLEFELEKGFVYRENHRSPGYYDGRYWTMWKLPMFG 136
Query: 383 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPTGY 243
C DS+QVLKELEEAKK PN+FIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 137 CTDSSQVLKELEEAKKANPNSFIRIIGFDNVRQVQCISFIAYKPAGY 183