BLASTX nr result
ID: Catharanthus22_contig00048275
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00048275 (278 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006367262.1| PREDICTED: uncharacterized protein LOC102604... 53 5e-08 ref|XP_004305246.1| PREDICTED: putative disease resistance prote... 51 8e-06 >ref|XP_006367262.1| PREDICTED: uncharacterized protein LOC102604848 [Solanum tuberosum] Length = 2498 Score = 53.1 bits (126), Expect(2) = 5e-08 Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 6/78 (7%) Frame = -2 Query: 217 GLHNVIKIGMSFYGIDDTGVSSDQESSDQGVKILFPKLKYLSLEDMPNLKEWMEVEVTQR 38 G H V IG +FYGID G ++ S++ +++ FP LK L LEDMP+L EW EV++ + Sbjct: 2056 GFHKVECIGPTFYGID--GNNNGSSSNNANIQV-FPLLKELLLEDMPSLTEWKEVQLLPK 2112 Query: 37 AG------SAVVFPILKE 2 +FP+LK+ Sbjct: 2113 GNVGRDRLGVRMFPVLKK 2130 Score = 29.3 bits (64), Expect(2) = 5e-08 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -1 Query: 275 TGCERLEEIPSLGLLQSLQRI 213 +GC+R +EIPSLG L+ LQ + Sbjct: 2032 SGCKRCKEIPSLGQLKFLQHL 2052 >ref|XP_004305246.1| PREDICTED: putative disease resistance protein RGA4-like [Fragaria vesca subsp. vesca] Length = 984 Score = 51.2 bits (121), Expect(2) = 8e-06 Identities = 33/73 (45%), Positives = 41/73 (56%) Frame = -2 Query: 220 KGLHNVIKIGMSFYGIDDTGVSSDQESSDQGVKILFPKLKYLSLEDMPNLKEWMEVEVTQ 41 K + N+ +IG FYG DT V ESS + + LFP LK L +E NL EWM E Sbjct: 466 KRMENLTRIGSEFYG--DTYVDCGNESSREARR-LFPALKTLHIEKAENLIEWM--EAPS 520 Query: 40 RAGSAVVFPILKE 2 GS VVFP L++ Sbjct: 521 ERGSRVVFPCLEK 533 Score = 23.9 bits (50), Expect(2) = 8e-06 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -1 Query: 272 GCERLEEIPSLGLLQSLQRI 213 GC + EE+P LG L +L + Sbjct: 444 GCSKCEELPVLGHLPNLSSV 463