BLASTX nr result
ID: Catharanthus22_contig00047769
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00047769
(319 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 116 3e-24
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 114 1e-23
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 114 2e-23
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 114 2e-23
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 114 2e-23
emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera] 114 2e-23
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 112 5e-23
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 111 9e-23
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 110 1e-22
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 110 2e-22
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 110 2e-22
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 110 2e-22
gb|AAT40486.1| putative polyprotein [Solanum demissum] 108 6e-22
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 108 6e-22
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 108 9e-22
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 106 3e-21
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 106 3e-21
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 106 3e-21
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 105 6e-21
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 104 1e-20
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 116 bits (290), Expect = 3e-24
Identities = 59/94 (62%), Positives = 67/94 (71%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KHRHILNVARA LFQ NLP+ F ES+LTA +LINRTP +VL KTP+ELLF +
Sbjct: 659 VERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKTPYELLFGERPS 718
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
L+SFGCL Y H KDKF R RKCVF+G
Sbjct: 719 YDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIG 752
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 114 bits (285), Expect = 1e-23
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KH+HILNV RAL FQANLPI+F ESVL A +LINRTP +LH KTPFE+LF
Sbjct: 338 VERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFGTPPS 397
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
+ + +FGCL++ HD DKF R RKCVFLG
Sbjct: 398 YAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLG 431
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 114 bits (284), Expect = 2e-23
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KH+HILNV RAL FQANLPI+F ESVL A +LINRTP +LH KTPFE+LF
Sbjct: 671 VERKHKHILNVGRALHFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFGTPPS 730
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
+ + +FGCL++ HD DKF R RKCVFLG
Sbjct: 731 YAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLG 764
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 114 bits (284), Expect = 2e-23
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KH+HILNV RAL FQANLPI+F ESVL A +LINRTP +LH KTPFE+LF
Sbjct: 424 VERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFGTPPS 483
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
+ + +FGCL++ HD DKF R RKCVFLG
Sbjct: 484 YAAIHTFGCLSFAHDXKSKGDKFASRSRKCVFLG 517
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 114 bits (284), Expect = 2e-23
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KH+HILNV RAL FQANLPI+F ESVL A +LINRTP +LH KTPFE+LF
Sbjct: 383 VERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFGTPPS 442
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
+ + +FGCL++ HD DKF R RKCVFLG
Sbjct: 443 YAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLG 476
>emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]
Length = 685
Score = 114 bits (284), Expect = 2e-23
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KH+HILNV RAL FQANLPI+F ESVL A +LINRTP +LH KTPFE+LF
Sbjct: 565 VERKHKHILNVGRALRFQANLPIYFWGESVLXAAHLINRTPSPLLHNKTPFEILFGTPPS 624
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
+ + +FGCL++ HD DKF R RKCVFLG
Sbjct: 625 YAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLG 658
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 112 bits (280), Expect = 5e-23
Identities = 55/94 (58%), Positives = 64/94 (68%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KHRHILNVARAL FQA LPI F LTA YLINRTP +L KTPFELL+ + P
Sbjct: 627 VERKHRHILNVARALRFQARLPIEFWSYCALTAAYLINRTPTPLLQGKTPFELLYNRPPP 686
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
+H++ FGC+ YVH+ DKF R K +FLG
Sbjct: 687 VNHIRVFGCICYVHNQKHGGDKFESRSNKSIFLG 720
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 111 bits (278), Expect = 9e-23
Identities = 56/94 (59%), Positives = 66/94 (70%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KH+HILNV RAL FQANLPI+F ESVL A +LIN TP +LH KTPFE+LF
Sbjct: 551 VERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINXTPSPLLHNKTPFEILFGTPPS 610
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
+ + +FGCL++ HD DKF R RKCVFLG
Sbjct: 611 YAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLG 644
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 110 bits (276), Expect = 1e-22
Identities = 54/94 (57%), Positives = 64/94 (68%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KHRHILNV RAL FQA+LPI F E VL A YLIN TP L KTP+E+L+ +
Sbjct: 482 VERKHRHILNVVRALRFQAHLPIEFWGECVLIARYLINXTPSVFLDGKTPYEILYGQAPS 541
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
H+ +FGCL Y HD + KDKF R RKC+F+G
Sbjct: 542 YKHIXTFGCLCYAHDQNRDKDKFASRSRKCIFVG 575
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 110 bits (275), Expect = 2e-22
Identities = 57/105 (54%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +3
Query: 6 SMVHCNKMVG-VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKT 182
S V+ ++ G VE KHRHILNVAR+LLFQA LPI F ESVLTA YLINRTP +L KT
Sbjct: 662 SCVYTHQQNGRVERKHRHILNVARSLLFQAELPISFWEESVLTAAYLINRTPTPILDGKT 721
Query: 183 PFELLFQKILPCSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
P+++L+ + + L+ FG L + H+ DKF+ RGRKC+F+G
Sbjct: 722 PYKILYSQPPSYASLRVFGSLCFARKHTGRLDKFQERGRKCIFVG 766
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 110 bits (275), Expect = 2e-22
Identities = 58/106 (54%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 TSMVHCNKMVG-VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWK 179
TS V + G VE KHRHILNVAR LFQ++LP F ES+LTA +LINRTP +LH K
Sbjct: 650 TSCVDTRQQNGRVERKHRHILNVARTCLFQSHLPRKFRGESILTAIHLINRTPTKILHGK 709
Query: 180 TPFELLFQKILPCSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
+P+E+LF S L++FGCL Y H + KDKF R R+CVF+G
Sbjct: 710 SPYEVLFGSRPSYSALRTFGCLCYAHYRARDKDKFSERSRRCVFVG 755
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 110 bits (275), Expect = 2e-22
Identities = 57/94 (60%), Positives = 66/94 (70%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KHRH+LNVARAL FQANLPI F E VLTA YLINRTP SVL+ TP+E L +K
Sbjct: 549 VERKHRHLLNVARALRFQANLPIQFWGECVLTAAYLINRTPSSVLNDSTPYERLHKKQPR 608
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
HL+ FG L Y H+ + DKF R R+CVF+G
Sbjct: 609 FDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFVG 642
>gb|AAT40486.1| putative polyprotein [Solanum demissum]
Length = 1065
Score = 108 bits (271), Expect = 6e-22
Identities = 56/94 (59%), Positives = 65/94 (69%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KHRHILNV RAL FQANLPI F E VL A YLINRTP +L+ KTP+E+LF K
Sbjct: 500 VERKHRHILNVTRALRFQANLPISFWGEYVLPAVYLINRTPTLILNGKTPYEVLFGKEPS 559
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
LK FGC+ + H S KDKF + R+C+FLG
Sbjct: 560 YKPLKVFGCICFAHLKSRDKDKFGSKSRQCIFLG 593
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 108 bits (271), Expect = 6e-22
Identities = 56/94 (59%), Positives = 66/94 (70%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KHRHILNVARALLFQA+LPI F ES+LTA YLINRTP S+L +TP+E+L
Sbjct: 686 VERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPYEVLHGSKPV 745
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
S L+ FG YVH + KDKF R R C+F+G
Sbjct: 746 YSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVG 779
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 108 bits (269), Expect = 9e-22
Identities = 53/94 (56%), Positives = 63/94 (67%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KHRHILNVARAL FQ+ LPI F LTA YLINRTP +L KTPFEL++ + P
Sbjct: 663 VERKHRHILNVARALRFQSGLPIEFWSYCALTAAYLINRTPTPLLKGKTPFELIYNRPPP 722
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
H++ FGC+ YVH+ DKF R K +FLG
Sbjct: 723 LQHIRIFGCICYVHNLKHGGDKFASRSNKSIFLG 756
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 106 bits (265), Expect = 3e-21
Identities = 59/110 (53%), Positives = 70/110 (63%), Gaps = 7/110 (6%)
Frame = +3
Query: 9 MVHCNKMVG-------VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSV 167
+VH VG VE KHRHILNVARA+LFQA+LPI F E+VLTA YLINRTP S+
Sbjct: 231 IVHQTSCVGTPQQNGRVERKHRHILNVARAILFQASLPIQFWGEAVLTAAYLINRTPTSL 290
Query: 168 LHWKTPFELLFQKILPCSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
+ +P+E+L HL+ FG YVH S KDKF R R CVF+G
Sbjct: 291 HNGLSPYEILHNSKPNYEHLRVFGSACYVHRASRDKDKFGERSRLCVFIG 340
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 106 bits (265), Expect = 3e-21
Identities = 51/94 (54%), Positives = 66/94 (70%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KHRHILN+ARAL FQ+ LPI F E +L+A YLINRTP +L K+P+E+L++
Sbjct: 449 VERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPK 508
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
SHL+ FG L Y H+ + DKF R R+CVF+G
Sbjct: 509 YSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVG 542
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 106 bits (265), Expect = 3e-21
Identities = 51/94 (54%), Positives = 66/94 (70%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KHRHILN+ARAL FQ+ LPI F E +L+A YLINRTP +L K+P+E+L++
Sbjct: 673 VERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPK 732
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
SHL+ FG L Y H+ + DKF R R+CVF+G
Sbjct: 733 YSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVG 766
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 105 bits (262), Expect = 6e-21
Identities = 51/94 (54%), Positives = 66/94 (70%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KHRHILN+ARAL FQ+ LPI F E +L+A YLINRTP +L K+P+E+L++
Sbjct: 449 VERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPN 508
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
SHL+ FG L Y H+ + DKF R R+CVF+G
Sbjct: 509 YSHLRVFGSLCYAHNQNHKGDKFVARSRRCVFVG 542
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 104 bits (259), Expect = 1e-20
Identities = 53/94 (56%), Positives = 61/94 (64%)
Frame = +3
Query: 36 VESKHRHILNVARALLFQANLPIHFLRESVLTAGYLINRTPLSVLHWKTPFELLFQKILP 215
VE KH+HILN+AR L FQA LPI F E VLTA YLINRTP +L KTP+E+LF +
Sbjct: 548 VERKHQHILNIARTLRFQACLPIDFWGECVLTAAYLINRTPTPILDGKTPYEILFGEKPN 607
Query: 216 CSHLKSFGCLAYVHDHSLPKDKFRLRGRKCVFLG 317
HL+ FG L Y H S DKF R R+C F G
Sbjct: 608 YEHLRVFGSLCYAHKKSRSNDKFDXRSRRCXFXG 641