BLASTX nr result
ID: Catharanthus22_contig00047711
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00047711
(300 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 76 5e-12
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 75 9e-12
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 75 9e-12
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 70 2e-10
ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291... 70 4e-10
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 69 7e-10
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 68 1e-09
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta... 68 1e-09
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 67 3e-09
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A... 66 4e-09
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 66 4e-09
ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313... 65 9e-09
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624... 65 1e-08
ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296... 64 2e-08
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 64 2e-08
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 64 2e-08
gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [... 64 3e-08
gb|EMJ21003.1| hypothetical protein PRUPE_ppa026469mg, partial [... 62 6e-08
gb|EMJ12193.1| hypothetical protein PRUPE_ppa021032mg [Prunus pe... 61 1e-07
gb|EMJ01337.1| hypothetical protein PRUPE_ppa017266mg, partial [... 61 1e-07
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = +2
Query: 17 VMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLIQ 196
++RR+L FC+ SGQKV+L KS++F S N S E+ LI GI ++LG YLG+P++Q
Sbjct: 561 IIRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGMPILQ 620
Query: 197 TRIKGQIYSYIVEWMRRKLCGWRAK 271
R+ + + ++E + +L GW+ +
Sbjct: 621 KRMNKETFGEVLERVSARLAGWKGR 645
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +2
Query: 17 VMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLIQ 196
V+RR+L FC SGQKV+L KS++F S N S ++ LI GI +LG YLG+P++Q
Sbjct: 223 VIRRVLERFCVASGQKVSLEKSKIFFSENVSRDLGKLISDESGISSTRELGKYLGMPVLQ 282
Query: 197 TRIKGQIYSYIVEWMRRKLCGWRAK 271
RI + I+E + +L GW+ +
Sbjct: 283 RRINKDTFGDILEKLTTRLAGWKGR 307
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
Length = 947
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +2
Query: 17 VMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLIQ 196
V+RRIL FC SGQKV+L+KS++F S N S ++ LI GI +LG YLG+P++Q
Sbjct: 375 VIRRILETFCIASGQKVSLDKSKIFFSKNVSRDLEKLISKESGIKSTRELGKYLGMPILQ 434
Query: 197 TRIKGQIYSYIVEWMRRKLCGWRAK 271
RI + ++E + +L GW+ +
Sbjct: 435 RRINKDTFGEVLERVSSRLAGWKGR 459
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/87 (40%), Positives = 50/87 (57%)
Frame = +2
Query: 11 ANVMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPL 190
A VM+ L FC+ SG KVN +KS+++ S NT +I D + + + D G YLGVP
Sbjct: 702 AQVMKWCLDRFCEASGSKVNEDKSKIYFSANTHLDIRDAVCNTLAMEATADFGKYLGVPT 761
Query: 191 IQTRIKGQIYSYIVEWMRRKLCGWRAK 271
I R + Y Y+V+ + KL GW+ K
Sbjct: 762 INGRSSKREYQYLVDRINGKLAGWKTK 788
>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
subsp. vesca]
Length = 948
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +2
Query: 29 ILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLIQTRIK 208
I E+C SGQ ++ KS +F SPNT +++ L+ G +E+ G YLG+P I R+K
Sbjct: 355 IFEEYCRASGQVISREKSSIFFSPNTPAQMARLMCELMGFVEVENPGKYLGLPTIWGRLK 414
Query: 209 GQIYSYIVEWMRRKLCGWRAK 271
SYI E + RKL GW+ K
Sbjct: 415 KDALSYITERINRKLDGWKEK 435
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/84 (38%), Positives = 49/84 (58%)
Frame = +2
Query: 20 MRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLIQT 199
+ I +E+C SGQ +N KS + SPNT ++ L+ G +ED G YLG+P +
Sbjct: 138 LMEIFKEYCKASGQLINGEKSSAYFSPNTPDQMSRLLGELMGFAEVEDPGKYLGLPTLWG 197
Query: 200 RIKGQIYSYIVEWMRRKLCGWRAK 271
R K + YIV+ ++RKL GW+ +
Sbjct: 198 RSKKEAVGYIVDRVQRKLVGWKQR 221
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/86 (37%), Positives = 53/86 (61%)
Frame = +2
Query: 17 VMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLIQ 196
V+R++L +FC SGQKV+L KS++F S N ++ I GI ++LG YLG+P++Q
Sbjct: 153 VVRKVLEKFCIASGQKVSLEKSKIFFSQNVHRDLEKFISDESGIKSTKELGKYLGMPVLQ 212
Query: 197 TRIKGQIYSYIVEWMRRKLCGWRAKV 274
RI + I+ + +L GW+ ++
Sbjct: 213 KRINKDTFGEILLRVSSRLAGWKGRM 238
>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 970
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/85 (36%), Positives = 53/85 (62%)
Frame = +2
Query: 17 VMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLIQ 196
++RR+L +FC+ SGQ V+L KS++ S N S ++ LI GI +LG YLG+P++Q
Sbjct: 393 IIRRVLEQFCEASGQNVSLEKSKIVFSNNVSRDMERLISGESGIGCTRELGKYLGMPILQ 452
Query: 197 TRIKGQIYSYIVEWMRRKLCGWRAK 271
R+ + ++E + L GW+++
Sbjct: 453 KRMNKETSGEVLEHVSSSLAGWKSR 477
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = +2
Query: 29 ILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLIQTRIK 208
+L +C SGQ +N+ KS +F SPNT EI L+ S IP + D GTYLG+P R K
Sbjct: 1311 LLHTYCIASGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPVVSDPGTYLGLPTFWHRSK 1370
Query: 209 GQIYSYIVEWMRRKLCGWR 265
+ +I + + RK+ GW+
Sbjct: 1371 KKALGFIKDSILRKVKGWK 1389
>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 768
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/86 (37%), Positives = 50/86 (58%)
Frame = +2
Query: 11 ANVMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPL 190
A + +L +FC +SG KVN +K+ V+ S N + I+ + G +DLG YLG+PL
Sbjct: 126 AQCINSVLGDFCLSSGTKVNQSKTHVYFSKNVPDAVATRIWRDLGYTVTKDLGKYLGMPL 185
Query: 191 IQTRIKGQIYSYIVEWMRRKLCGWRA 268
+ +R+ Q Y I++ +KL GW A
Sbjct: 186 LHSRVSQQTYQGILDKTDQKLLGWAA 211
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = +2
Query: 11 ANVMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPL 190
A +M L F D SG KVN +KS +F S N ++ + I S +P E LGTYLG+P+
Sbjct: 1232 AQIMFDCLDSFSDASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPM 1291
Query: 191 IQTRIKGQIYSYIVEWMRRKLCGWRA 268
++ R+ ++ +++ MR KL W+A
Sbjct: 1292 LKERVSRNTFNAVIDKMRTKLSSWKA 1317
>ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313223 [Fragaria vesca
subsp. vesca]
Length = 543
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +2
Query: 20 MRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLIQT 199
++ L FC SGQ ++ KS +F SPNT+ + I + G P DLG YLG+PLI +
Sbjct: 274 LKTCLDNFCAISGQIISYEKSLIFCSPNTTKTMASSISATCGSPLTSDLGKYLGMPLIHS 333
Query: 200 RIKGQIYSYIVEWMRRKLCGWRAKV 274
R+ Y I ++ +L W++KV
Sbjct: 334 RVNKHTYDAIFYKVQSRLSSWKSKV 358
>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
Length = 1635
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/86 (40%), Positives = 52/86 (60%)
Frame = +2
Query: 11 ANVMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPL 190
A ++ +I+ EF +SG KVN +K+ V+ S N S+ I S+ G ++LG YLGVPL
Sbjct: 1192 AIIINKIIDEFSASSGAKVNKSKTLVYFSANISAMEASRIGSDLGYSVTDNLGKYLGVPL 1251
Query: 191 IQTRIKGQIYSYIVEWMRRKLCGWRA 268
+RI Q Y IV+ + ++L GW A
Sbjct: 1252 CHSRISKQTYQSIVDKIDQRLSGWNA 1277
>ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296313 [Fragaria vesca
subsp. vesca]
Length = 449
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = +2
Query: 14 NVMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLI 193
++++ L FC S Q V+ KS VF SPNTS LI + G P DLG YLG+PLI
Sbjct: 266 SLLKTCLDNFCALSRQTVSFEKSLVFCSPNTSKSTASLISNVCGSPLTCDLGKYLGMPLI 325
Query: 194 QTRIKGQIYSYIVEWMRRKLCGWRAKV 274
R+ Y+ + + ++++L W++KV
Sbjct: 326 YDRVNKCTYAGLFDKVQKRLFSWKSKV 352
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/86 (37%), Positives = 51/86 (59%)
Frame = +2
Query: 11 ANVMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPL 190
A +M L F + SG KVN +KS +F S N ++ + I S +P E LGTYLG+P+
Sbjct: 700 AQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPM 759
Query: 191 IQTRIKGQIYSYIVEWMRRKLCGWRA 268
++ R+ ++ +++ MR KL W+A
Sbjct: 760 LKERVSRNTFNAVIDKMRTKLSSWKA 785
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/86 (37%), Positives = 51/86 (59%)
Frame = +2
Query: 11 ANVMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPL 190
A +M L F + SG KVN +KS +F S N ++ + I S +P E LGTYLG+P+
Sbjct: 700 AQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPM 759
Query: 191 IQTRIKGQIYSYIVEWMRRKLCGWRA 268
++ R+ ++ +++ MR KL W+A
Sbjct: 760 LKERVSRNTFNAVIDKMRTKLSSWKA 785
>gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [Prunus persica]
Length = 387
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/89 (35%), Positives = 50/89 (56%)
Frame = +2
Query: 5 K*ANVMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGV 184
K A +MR L +FC SGQ VN +KS +F SPNT + + + G P +LG YLG+
Sbjct: 69 KQAQIMRDCLEKFCSVSGQAVNFDKSAIFCSPNTGNVLAQDLSRICGSPLTANLGNYLGM 128
Query: 185 PLIQTRIKGQIYSYIVEWMRRKLCGWRAK 271
P++ ++ Y +V ++ L W++K
Sbjct: 129 PILHNKVCKDTYGGLVNKVQNCLTLWKSK 157
>gb|EMJ21003.1| hypothetical protein PRUPE_ppa026469mg, partial [Prunus persica]
Length = 212
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/88 (35%), Positives = 51/88 (57%)
Frame = +2
Query: 11 ANVMRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPL 190
A +M+ L FC SGQ V+ +KS VF SPNT + I +G P ++LG YLG+ +
Sbjct: 35 ARMMKGCLDLFCQASGQTVSFDKSTVFCSPNTIRALAQEISFIYGSPLTDNLGKYLGMHI 94
Query: 191 IQTRIKGQIYSYIVEWMRRKLCGWRAKV 274
+ +R+ YS ++ + +L W++K+
Sbjct: 95 LHSRVTRSTYSSLLSKIHCRLANWKSKL 122
>gb|EMJ12193.1| hypothetical protein PRUPE_ppa021032mg [Prunus persica]
Length = 781
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +2
Query: 20 MRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLIQT 199
MR +L +C SGQ++N KS +F SPNT + I + + G+ ++D G YLG+P +
Sbjct: 471 MRLLLDGYCRASGQQINFGKSSLFFSPNTPASIRTQLGAILGMTMVDDPGKYLGLPTMWG 530
Query: 200 RIKGQIYSYIVEWMRRKLCGWR 265
R K + ++ E + RKL W+
Sbjct: 531 RSKKEALQFVKEKLLRKLSRWK 552
>gb|EMJ01337.1| hypothetical protein PRUPE_ppa017266mg, partial [Prunus persica]
Length = 525
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/85 (36%), Positives = 49/85 (57%)
Frame = +2
Query: 20 MRRILREFCDNSGQKVNLNKSQVFNSPNTSSEICDLIYSNFGIPHIEDLGTYLGVPLIQT 199
M ++L +C SGQ+++L KS +F SPNT S + I +P ++D G YLG+P I
Sbjct: 227 MVQLLNAYCRASGQQISLAKSTIFFSPNTPSNLGQQICHILRMPRVDDPGKYLGLPTIWG 286
Query: 200 RIKGQIYSYIVEWMRRKLCGWRAKV 274
K + YI E + K+ GW+ ++
Sbjct: 287 HSKHEALLYIKENIMSKIQGWKQQL 311