BLASTX nr result
ID: Catharanthus22_contig00047502
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00047502
(249 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004248468.1| PREDICTED: pentatricopeptide repeat-containi... 128 7e-28
ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containi... 125 4e-27
gb|EOX99344.1| Pentatricopeptide repeat (PPR-like) superfamily p... 121 8e-26
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera] 120 2e-25
ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containi... 115 6e-24
gb|ACN85287.1| EMB2261 putative [Oryza australiensis] 113 3e-23
ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi... 112 4e-23
ref|XP_003560587.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-23
gb|ACN85255.1| EMB2261 putative [Oryza officinalis] 111 1e-22
gb|AFW69092.1| hypothetical protein ZEAMMB73_188982 [Zea mays] 110 1e-22
ref|XP_002438867.1| hypothetical protein SORBIDRAFT_10g027503 [S... 110 1e-22
gb|EMJ17335.1| hypothetical protein PRUPE_ppa019108mg, partial [... 110 2e-22
gb|ACN85235.1| EMB2261 putative [Oryza minuta] 110 2e-22
ref|XP_004967189.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-22
gb|EXB62282.1| hypothetical protein L484_022170 [Morus notabilis] 108 7e-22
ref|XP_006491628.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_006447316.1| hypothetical protein CICLE_v10014508mg [Citr... 107 2e-21
gb|ACN85298.1| EMB2261 putative [Oryza coarctata] 107 2e-21
ref|XP_006657127.1| PREDICTED: pentatricopeptide repeat-containi... 106 4e-21
>ref|XP_004248468.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Solanum lycopersicum]
Length = 597
Score = 128 bits (322), Expect = 7e-28
Identities = 60/82 (73%), Positives = 71/82 (86%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
G++D+GRKY+ M +YGIKA IEHYSCMVDLLGRAGE+EEAESLI SEF ND+SLWA
Sbjct: 469 GMVDEGRKYYLSMINEYGIKAHIEHYSCMVDLLGRAGEVEEAESLILGSEFRNDASLWAT 528
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
+LG+CT+ TNP VAERIAKKM+
Sbjct: 529 LLGACTSNTNPTVAERIAKKMM 550
>ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Solanum tuberosum]
Length = 597
Score = 125 bits (315), Expect = 4e-27
Identities = 58/82 (70%), Positives = 70/82 (85%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
G++D+GRKY+ M +YGIKA IEHYSCMVDLLGR GE+EEAESLI +EF ND+SLWA
Sbjct: 469 GMVDEGRKYYLSMINEYGIKAHIEHYSCMVDLLGRVGEVEEAESLILGAEFRNDASLWAT 528
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
+LG+CT+ TNP VAERIAKKM+
Sbjct: 529 LLGACTSSTNPTVAERIAKKMM 550
>gb|EOX99344.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 638
Score = 121 bits (304), Expect = 8e-26
Identities = 58/82 (70%), Positives = 69/82 (84%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
GL+DQGRKYF LMT +YGIK IEHY+CMVDLLGRAG +EEAE+LI S++ +DSSLWA
Sbjct: 480 GLVDQGRKYFALMTREYGIKPGIEHYNCMVDLLGRAGLLEEAENLIESADLRDDSSLWAV 539
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
+LG+CTT T+ AERIAKKMI
Sbjct: 540 LLGACTTCTSSSTAERIAKKMI 561
>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 120 bits (301), Expect = 2e-25
Identities = 57/82 (69%), Positives = 71/82 (86%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
GL+D+GR+YF MT+DYGIK IEHYSCMVDLLGRAG +EEAE LI +S+F +DSSLWAA
Sbjct: 475 GLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAA 534
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
+LG+CTT TN +AERIAK+++
Sbjct: 535 LLGACTTCTNYEIAERIAKRVM 556
>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 120 bits (301), Expect = 2e-25
Identities = 57/82 (69%), Positives = 71/82 (86%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
GL+D+GR+YF MT+DYGIK IEHYSCMVDLLGRAG +EEAE LI +S+F +DSSLWAA
Sbjct: 534 GLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAA 593
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
+LG+CTT TN +AERIAK+++
Sbjct: 594 LLGACTTCTNYEIAERIAKRVM 615
>ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Fragaria vesca subsp. vesca]
Length = 658
Score = 115 bits (288), Expect = 6e-24
Identities = 58/82 (70%), Positives = 66/82 (80%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
GL+DQGRK F LMT+ YGIK IEHY CMVDLLGRAG +EEAE+LI S+E NDSSLWA
Sbjct: 476 GLVDQGRKNFILMTKKYGIKPGIEHYCCMVDLLGRAGLLEEAENLIESAECRNDSSLWAV 535
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
+LG+ T+ TN AERIAKKMI
Sbjct: 536 LLGASTSCTNSATAERIAKKMI 557
>gb|ACN85287.1| EMB2261 putative [Oryza australiensis]
Length = 626
Score = 113 bits (282), Expect = 3e-23
Identities = 54/82 (65%), Positives = 64/82 (78%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
G+++QGR YFD M +DYGI IEHY+CMVDLL R +EEAE LIN S F NDSSLWAA
Sbjct: 459 GMVEQGRNYFDSMCKDYGIAPGIEHYNCMVDLLSRVELLEEAEDLINESPFRNDSSLWAA 518
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
ILG+ T +NP VAER+AKKM+
Sbjct: 519 ILGASATHSNPDVAERVAKKMM 540
>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 112 bits (281), Expect = 4e-23
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
GL+DQ R YFDLMT YGIK +EHY+CMVDLLGRAG +EEAE+LI ++E NDSSLW
Sbjct: 476 GLVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLV 535
Query: 67 ILGSCTTG-TNPIVAERIAKKMI 2
+LG+CTT TN AERIAKK++
Sbjct: 536 LLGACTTTCTNSATAERIAKKLM 558
>ref|XP_003560587.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Brachypodium distachyon]
Length = 602
Score = 112 bits (280), Expect = 5e-23
Identities = 53/82 (64%), Positives = 66/82 (80%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
G+++QGR YF+ M++DYGI IEHY+C+VDLL R +EEAE LIN S FSNDSSLWAA
Sbjct: 455 GMVEQGRNYFNSMSKDYGIAPGIEHYNCIVDLLSRVELLEEAEDLINKSPFSNDSSLWAA 514
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
ILG+ T +NP VAER+AKKM+
Sbjct: 515 ILGASATQSNPDVAERVAKKMM 536
>gb|ACN85255.1| EMB2261 putative [Oryza officinalis]
Length = 622
Score = 111 bits (277), Expect = 1e-22
Identities = 53/82 (64%), Positives = 64/82 (78%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
G+++QGR YF+ M +DYGI IEHY+CMVDLL R +EEAE LIN S F NDSSLWAA
Sbjct: 455 GMVEQGRNYFNSMCKDYGIAPGIEHYNCMVDLLSRVELLEEAEDLINKSPFRNDSSLWAA 514
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
ILG+ T +NP VAER+AKKM+
Sbjct: 515 ILGASATHSNPDVAERVAKKMM 536
>gb|AFW69092.1| hypothetical protein ZEAMMB73_188982 [Zea mays]
Length = 630
Score = 110 bits (276), Expect = 1e-22
Identities = 50/82 (60%), Positives = 66/82 (80%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
G++++GR YF+ M++DYGI IEHY+C+VDLL R +EEAE L+N S+F +DSSLWAA
Sbjct: 462 GMVEEGRNYFNSMSKDYGIPPGIEHYNCIVDLLSRVELLEEAEDLVNKSQFRDDSSLWAA 521
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
ILG+C T TNP VA R+AKKM+
Sbjct: 522 ILGACATHTNPDVAVRVAKKMM 543
>ref|XP_002438867.1| hypothetical protein SORBIDRAFT_10g027503 [Sorghum bicolor]
gi|241917090|gb|EER90234.1| hypothetical protein
SORBIDRAFT_10g027503 [Sorghum bicolor]
Length = 610
Score = 110 bits (276), Expect = 1e-22
Identities = 50/82 (60%), Positives = 66/82 (80%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
G++++GR YF+ M++DYGI IEHY+C+VDLL R +EEAE L+N S+F +DSSLWAA
Sbjct: 460 GMVEEGRNYFNSMSKDYGIPPGIEHYNCIVDLLSRVELLEEAEDLVNKSQFRDDSSLWAA 519
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
ILG+C T TNP VA R+AKKM+
Sbjct: 520 ILGACATHTNPDVAVRVAKKMM 541
>gb|EMJ17335.1| hypothetical protein PRUPE_ppa019108mg, partial [Prunus persica]
Length = 608
Score = 110 bits (275), Expect = 2e-22
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
GL+DQGR YF LMT++YGIK IEHY C VDLLGRAG +EEAE+LI +++ NDSSLW
Sbjct: 474 GLVDQGRNYFILMTKEYGIKPGIEHYCCTVDLLGRAGLLEEAENLIENADCRNDSSLWGV 533
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
+LG+ T+ +N AERIAKKMI
Sbjct: 534 LLGASTSCSNSTTAERIAKKMI 555
>gb|ACN85235.1| EMB2261 putative [Oryza minuta]
Length = 612
Score = 110 bits (275), Expect = 2e-22
Identities = 53/82 (64%), Positives = 63/82 (76%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
G+++QGR YF+ M EDY I IEHY+CMVDLL R +EEAE LIN S F NDSSLWAA
Sbjct: 456 GMVEQGRNYFNSMCEDYSIAPGIEHYNCMVDLLSRVELLEEAEDLINKSPFRNDSSLWAA 515
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
ILG+ T +NP VAER+AKKM+
Sbjct: 516 ILGASATHSNPDVAERVAKKMM 537
>ref|XP_004967189.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Setaria italica]
Length = 624
Score = 110 bits (274), Expect = 3e-22
Identities = 51/82 (62%), Positives = 64/82 (78%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
G++++GR YF+ MT+DYGI IEHY+CMVDLL R +EEAE L+N S F +DSSLWAA
Sbjct: 462 GMVEEGRNYFNSMTKDYGIAPGIEHYNCMVDLLSRVELLEEAEDLVNKSPFRDDSSLWAA 521
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
ILG+C T TNP VA R+AK M+
Sbjct: 522 ILGACATHTNPDVAVRVAKLMM 543
>gb|EXB62282.1| hypothetical protein L484_022170 [Morus notabilis]
Length = 633
Score = 108 bits (270), Expect = 7e-22
Identities = 50/82 (60%), Positives = 66/82 (80%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
GL+++GR +F MT +YGIKA EHY+CMVDLLGR+G +EEAE+LI ++ N+SSLWA
Sbjct: 475 GLVERGRNFFKSMTAEYGIKAGHEHYNCMVDLLGRSGLLEEAENLIEKADCGNNSSLWAV 534
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
+LG+CTT TN AERIA+KM+
Sbjct: 535 LLGACTTCTNSTTAERIAQKMM 556
>ref|XP_006491628.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Citrus sinensis]
Length = 612
Score = 107 bits (267), Expect = 2e-21
Identities = 50/82 (60%), Positives = 67/82 (81%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
GL+D+GRK+F MT++Y IK IEHY+CMVDLLGRAG +EEAE+LI +++ +DSSLW
Sbjct: 473 GLIDRGRKHFASMTKEYRIKPKIEHYNCMVDLLGRAGLLEEAETLIENADCRHDSSLWEV 532
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
+LG+CTT N VAER+AKK++
Sbjct: 533 LLGACTTFRNAHVAERVAKKIM 554
>ref|XP_006447316.1| hypothetical protein CICLE_v10014508mg [Citrus clementina]
gi|557549927|gb|ESR60556.1| hypothetical protein
CICLE_v10014508mg [Citrus clementina]
Length = 668
Score = 107 bits (267), Expect = 2e-21
Identities = 50/82 (60%), Positives = 67/82 (81%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
GL+D+GRK+F MT++Y IK IEHY+CMVDLLGRAG +EEAE+LI +++ +DSSLW
Sbjct: 473 GLIDRGRKHFASMTKEYRIKPKIEHYNCMVDLLGRAGLLEEAETLIENADCRHDSSLWEV 532
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
+LG+CTT N VAER+AKK++
Sbjct: 533 LLGACTTFRNAHVAERVAKKIM 554
>gb|ACN85298.1| EMB2261 putative [Oryza coarctata]
Length = 621
Score = 107 bits (267), Expect = 2e-21
Identities = 51/80 (63%), Positives = 63/80 (78%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
G+++QGRKYF+ M++DY I IEHY+CMVDLL R +EEAE LIN S F +DSSLWAA
Sbjct: 452 GMVEQGRKYFNSMSKDYSITPGIEHYNCMVDLLSRVELLEEAEDLINKSPFRDDSSLWAA 511
Query: 67 ILGSCTTGTNPIVAERIAKK 8
ILG+ T +NP VAER+AKK
Sbjct: 512 ILGASATHSNPDVAERVAKK 531
>ref|XP_006657127.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like, partial [Oryza brachyantha]
Length = 582
Score = 106 bits (264), Expect = 4e-21
Identities = 51/82 (62%), Positives = 63/82 (76%)
Frame = -3
Query: 247 GLLDQGRKYFDLMTEDYGIKASIEHYSCMVDLLGRAGEIEEAESLINSSEFSNDSSLWAA 68
G+++QGRKYF+ M+ +Y I IEHY+CMVDLL R +EEAE LIN S F DSSLWAA
Sbjct: 413 GMVEQGRKYFNSMSNNYTIAPGIEHYNCMVDLLSRVELLEEAEDLINKSPFRGDSSLWAA 472
Query: 67 ILGSCTTGTNPIVAERIAKKMI 2
ILG+ T +NP VAER+AKKM+
Sbjct: 473 ILGASATHSNPDVAERVAKKMM 494