BLASTX nr result

ID: Catharanthus22_contig00047493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00047493
         (427 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006375647.1| hypothetical protein POPTR_0014s18610g, part...    68   2e-15
ref|XP_002331338.1| predicted protein [Populus trichocarpa]            47   4e-09
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659...    63   5e-08
ref|XP_006582542.1| PREDICTED: uncharacterized protein LOC102668...    60   3e-07
ref|XP_004240779.1| PREDICTED: uncharacterized protein LOC101256...    42   3e-07
ref|XP_006584391.1| PREDICTED: uncharacterized protein LOC102663...    56   4e-06
ref|XP_004239563.1| PREDICTED: uncharacterized protein LOC101259...    39   5e-06

>ref|XP_006375647.1| hypothetical protein POPTR_0014s18610g, partial [Populus
           trichocarpa] gi|550324501|gb|ERP53444.1| hypothetical
           protein POPTR_0014s18610g, partial [Populus trichocarpa]
          Length = 303

 Score = 67.8 bits (164), Expect(2) = 2e-15
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 19/107 (17%)
 Frame = +2

Query: 113 LCWKLKTLKGPLKELNKKDYSHI*SRTSKERTQTTVGTTP-------------------R 235
           LC +LK LKGPLKELN+  ++HI  R S+  +Q                          +
Sbjct: 189 LCRRLKLLKGPLKELNRLHFNHISERVSRLESQLEQLQNAFQQDRDNQFLFAQDRFLRSK 248

Query: 236 LPYLSKAKRKFCAQKIKCDFL*NGDKGTRLFHSLIKRNAKKNFIASL 376
           L  L  A+++F +QKIKC+FL + D G++ FH+L+ +N ++NFI ++
Sbjct: 249 LSSLKFAEKQFFSQKIKCNFLKHSDNGSKFFHALLGQNHQRNFILAI 295



 Score = 40.0 bits (92), Expect(2) = 2e-15
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 10  RPSFMFFNMWVDHDSFMNLVQQRWNTQFMGTKQFTL 117
           R +F FFNMW  HD F+ +V   W++   GT  + L
Sbjct: 154 RQNFNFFNMWATHDQFLQVVSSCWSSPVYGTPMYIL 189


>ref|XP_002331338.1| predicted protein [Populus trichocarpa]
          Length = 819

 Score = 47.0 bits (110), Expect(2) = 4e-09
 Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
 Frame = +2

Query: 113  LCWKLKTLKGPLKELNKKDYSHI*SRT-----SKERTQTTVGTTPRLPYLS--------- 250
            LC KL+ LK  LK  N   +S+I  R        ++ Q  + T    P L          
Sbjct: 654  LCCKLRKLKQELKLFNMAHFSNISDRVRDAKNKMDKAQQALHTAHENPILCMRERDVVHK 713

Query: 251  -----KAKRKFCAQKIKCDFL*NGDKGTRLFHSLIKRNAKKNFIASLTKRDGFFTTSKEE 415
                 +A+  F  QK +  +L  GD+ T  FH  +     +N + SLT+ DG     +E 
Sbjct: 714  YASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRQNRNKLLSLTREDGEVVERQEA 773

Query: 416  IQEE 427
            ++ E
Sbjct: 774  VKSE 777



 Score = 39.3 bits (90), Expect(2) = 4e-09
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +1

Query: 4   KPRPSFMFFNMWVDHDSFMNLVQQRWNTQFMGTKQFTL 117
           K +P F FF+MW+DHD FM LV++ W+    G   + L
Sbjct: 618 KKKP-FRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQL 654


>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
          Length = 964

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
 Frame = +2

Query: 113  LCWKLKTLKGPLKELNKKDYSHI*SRTSKERTQ-----TTVGTTPRLP------------ 241
            +C KLK LK PLK L K+++S+I +R      +      ++   P+ P            
Sbjct: 645  VCKKLKALKAPLKNLFKQEFSNISNRVELAEAEYNSVLNSIKQNPQDPSLLALANRTRGQ 704

Query: 242  --YLSKAKRKFCAQKIKCDFL*NGDKGTRLFHSLIKRNAKKNFIASLTKRDGFFTTSKEE 415
               L KA+    AQ IK  +L   DK ++ FH+LIKRN    FIA++   DG  T+S++E
Sbjct: 705  TIMLRKAESMKFAQLIKNKYLLQADKCSKFFHALIKRNKHSRFIAAIRLEDGHNTSSQDE 764

Query: 416  I 418
            I
Sbjct: 765  I 765


>ref|XP_006582542.1| PREDICTED: uncharacterized protein LOC102668030 [Glycine max]
          Length = 411

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
 Frame = +2

Query: 113 LCWKLKTLKGPLKELNKKDYSHI*SRTSKERTQ-----TTVGTTPRLP------------ 241
           +C KLK LK PLK L K+++ +I +R      +      ++   P+ P            
Sbjct: 273 VCKKLKALKAPLKNLFKQEFRNISNRVELAEAEYNSVLNSLKQNPQDPSLLALANRTRGQ 332

Query: 242 --YLSKAKRKFCAQKIKCDFL*NGDKGTRLFHSLIKRNAKKNFIASLTKRDGFFTTSKEE 415
              L KA+    AQ IK  +L   DK ++ FH+LIKRN    FIA++   DG  T+S++E
Sbjct: 333 TIMLRKAESMKFAQLIKNKYLLQADKCSKFFHALIKRNRHSRFIAAIRLEDGHNTSSQDE 392

Query: 416 I 418
           I
Sbjct: 393 I 393


>ref|XP_004240779.1| PREDICTED: uncharacterized protein LOC101256493 [Solanum
           lycopersicum]
          Length = 441

 Score = 42.0 bits (97), Expect(2) = 3e-07
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 19/122 (15%)
 Frame = +2

Query: 119 WKLKTLKGPLKELNKKDYSHI*SRTSKERTQ------------------TTVGTTPRLPY 244
           +KLK L+  LK+LN+K++ +I ++  + R +                         +L  
Sbjct: 184 YKLKALQPVLKQLNRKEFKYISNQIEEARNELIDIQNQLCHQAKDELVTKEKELLTKLEK 243

Query: 245 LSKAKRKFCAQKIKCDFL*NGDKGTRLFHSLIK-RNAKKNFIASLTKRDGFFTTSKEEIQ 421
           LS  K     QK++  ++  GD   +   S+IK RN KKN I  L   DG   +  +EIQ
Sbjct: 244 LSLIKESALRQKVRAKWIKLGDANNKYLSSVIKERNHKKN-IRILMSLDGRKLSEPQEIQ 302

Query: 422 EE 427
           +E
Sbjct: 303 DE 304



 Score = 37.7 bits (86), Expect(2) = 3e-07
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 10  RPSFMFFNMWVDHDSFMNLVQQRWNTQ 90
           R SF FFN+W +HD F++LV++ W  +
Sbjct: 147 RASFKFFNIWTEHDLFLDLVEKVWKQE 173


>ref|XP_006584391.1| PREDICTED: uncharacterized protein LOC102663359 [Glycine max]
          Length = 272

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 19/121 (15%)
 Frame = +2

Query: 113 LCWKLKTLKGPLKELNKKDYSHI*SRTSKERTQ-----TTVGTTPRLP------------ 241
           +C KLK LK PL  L K+++++I +R      +      ++   P+ P            
Sbjct: 4   VCKKLKALKAPLMNLFKQEFNNISNRVELAEAEYNSVLNSLKKNPQDPSFLALANRTRGQ 63

Query: 242 --YLSKAKRKFCAQKIKCDFL*NGDKGTRLFHSLIKRNAKKNFIASLTKRDGFFTTSKEE 415
              L KA+    AQ IK  +L   DK +R FH+LIKRN    FIA++   D   T+S++E
Sbjct: 64  TIMLRKAESMKFAQLIKNRYLLQADKCSRFFHALIKRNRHSRFIAAIKLEDRHNTSSQDE 123

Query: 416 I 418
           I
Sbjct: 124 I 124


>ref|XP_004239563.1| PREDICTED: uncharacterized protein LOC101259634 [Solanum
           lycopersicum]
          Length = 425

 Score = 38.9 bits (89), Expect(2) = 5e-06
 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 18/121 (14%)
 Frame = +2

Query: 119 WKLKTLKGPLKELNKKDYSHI*SRTSKERTQTT------------------VGTTPRLPY 244
           +KLK L+  LK+LN++++ +I  +  + R                           +L  
Sbjct: 251 YKLKALQPVLKQLNRREFKYIGKQIEEARNDLADIQNQLCNQANDDLVTKEKDLLTKLEK 310

Query: 245 LSKAKRKFCAQKIKCDFL*NGDKGTRLFHSLIKRNAKKNFIASLTKRDGFFTTSKEEIQE 424
            S  +     QK +  ++  GD   + F S+IK    K  I SL   DG      +EIQ+
Sbjct: 311 WSLIEESSLRQKARAKWIKLGDANNKYFSSVIKERNYKKHIRSLMSIDGKMLYDPQEIQD 370

Query: 425 E 427
           E
Sbjct: 371 E 371



 Score = 37.0 bits (84), Expect(2) = 5e-06
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +1

Query: 10  RPSFMFFNMWVDHDSFMNLVQQRW 81
           R SF FFN+W +H+SF+ LV+  W
Sbjct: 214 RASFKFFNVWTEHESFLELVETVW 237


Top