BLASTX nr result
ID: Catharanthus22_contig00047465
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00047465
(316 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624... 61 9e-14
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 56 7e-13
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 51 7e-13
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 51 2e-12
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 50 2e-12
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe... 52 2e-12
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript... 50 2e-12
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 49 3e-12
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 49 3e-12
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 53 3e-12
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta... 49 3e-12
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 49 3e-12
gb|EOY02808.1| Uncharacterized protein TCM_017202 [Theobroma cacao] 58 5e-12
gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [... 50 1e-11
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 50 1e-11
gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus pe... 51 2e-11
ref|XP_002468277.1| hypothetical protein SORBIDRAFT_01g042855 [S... 61 2e-11
gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus pe... 48 3e-11
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 49 4e-11
ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein A... 48 4e-11
>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
Length = 1635
Score = 60.8 bits (146), Expect(2) = 9e-14
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINLPS 144
R +T N+I+AQE+IHS + K K +M IK+DL KA+D L W+FI+ L +NLP+
Sbjct: 1041 RHITENIIVAQEIIHSMRRKKGRKG-FMAIKVDLGKAYDRLSWTFIQETLQELNLPT 1096
Score = 41.2 bits (95), Expect(2) = 9e-14
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -2
Query: 66 FLPSRGIRQGDPISPHLFILCM 1
F P RG+RQGDP+SP++F+LC+
Sbjct: 1123 FCPGRGVRQGDPLSPYIFVLCI 1144
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 55.8 bits (133), Expect(2) = 7e-13
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINLP 147
R++T NVII QE+ HS K K +M +K+D EKA+D L W+FIR L + +P
Sbjct: 551 RQITDNVIIVQEMFHSMRN-KQGKKGFMAVKIDFEKAYDRLRWTFIRESLMELRIP 605
Score = 43.1 bits (100), Expect(2) = 7e-13
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILCM 1
G P + P+RG+RQGDP+SP+L+++CM
Sbjct: 627 GEPMEKICPTRGLRQGDPLSPYLYVICM 654
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 51.2 bits (121), Expect(2) = 7e-13
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINLPSQ 141
R ++ N I+A E+IH + + K +M +K+D+ KA+D +EWSF+ ++ + Q
Sbjct: 189 RLISDNTILAAEIIHYLRRRRRGKKGFMALKMDMSKAYDRIEWSFLEAIMRKLGFAEQ 246
Score = 47.8 bits (112), Expect(2) = 7e-13
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = -2
Query: 96 FTHYGTPTDFFLPSRGIRQGDPISPHLFILC 4
F GTP F PSRG+RQGDP+SP+LF+LC
Sbjct: 262 FVINGTPHGFLHPSRGLRQGDPLSPYLFLLC 292
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 51.2 bits (121), Expect(2) = 2e-12
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINLP 147
R + N+IIA+E+ F K N K M +K+DL KA+D LEW FIR L N P
Sbjct: 549 RNIQENIIIAKEMAFLFKK-SNPKRNIMALKIDLSKAYDSLEWGFIRETLQGFNFP 603
Score = 46.6 bits (109), Expect(2) = 2e-12
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILCM 1
G T F PSRGIRQGDP+SP++F+LCM
Sbjct: 625 GEVTQSFSPSRGIRQGDPLSPYIFVLCM 652
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 50.1 bits (118), Expect(2) = 2e-12
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMML 165
R +T N++IAQE H+ K YM IK D+ KA+D +EWSF+R ++
Sbjct: 491 RLITDNILIAQENFHALRTNPACKKKYMAIKTDMSKAYDRVEWSFLRALM 540
Score = 47.8 bits (112), Expect(2) = 2e-12
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILC 4
G+P F PSRGIRQGDPISP LFILC
Sbjct: 568 GSPKGFIKPSRGIRQGDPISPFLFILC 594
>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
Length = 1011
Score = 52.0 bits (123), Expect(2) = 2e-12
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINLPSQ 141
R ++ N I+A E+IH + + K +M++K+D+ KA+D +EWSF+ ++ + Q
Sbjct: 447 RLISDNTILAAEIIHYLRRRRRGKKGFMVLKMDMSKAYDRIEWSFLEAIMRKLGFAEQ 504
Score = 45.8 bits (107), Expect(2) = 2e-12
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -2
Query: 96 FTHYGTPTDFFLPSRGIRQGDPISPHLFILC 4
F GTP F PSRG+ QGDP+SP+LF+LC
Sbjct: 520 FVINGTPHGFLHPSRGLHQGDPLSPYLFLLC 550
>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 400
Score = 50.1 bits (118), Expect(2) = 2e-12
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMML 165
R +T N++IAQE H+ K YM IK D+ KA+D +EWSF+R ++
Sbjct: 125 RLITDNILIAQENFHALRTNPACKKKYMAIKTDMSKAYDRVEWSFLRALM 174
Score = 47.8 bits (112), Expect(2) = 2e-12
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILC 4
G+P F PSRGIRQGDPISP LFILC
Sbjct: 202 GSPKGFIKPSRGIRQGDPISPFLFILC 228
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 49.3 bits (116), Expect(2) = 3e-12
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = -3
Query: 299 NVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINL 150
N+++ QE +HS + K K +ML+KLDLEKA+D + W F++ L + L
Sbjct: 413 NIVLVQEAVHSMRRKKGRKG-WMLLKLDLEKAYDRVRWDFLQETLEAAGL 461
Score = 47.8 bits (112), Expect(2) = 3e-12
Identities = 18/28 (64%), Positives = 25/28 (89%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILCM 1
G TD F+P+RG+RQGDP+SP+LF+LC+
Sbjct: 484 GERTDSFVPARGLRQGDPLSPYLFVLCL 511
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 48.9 bits (115), Expect(2) = 3e-12
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFI 177
R + N++IA EV HSF K K + ++ IKLD+EKA+D LEW +I
Sbjct: 560 RLIQDNILIAHEVFHSF-KNKTGRGGWIAIKLDMEKAYDRLEWKYI 604
Score = 47.8 bits (112), Expect(2) = 3e-12
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILC 4
G P + F PSRGIRQGDP+SP+LFILC
Sbjct: 636 GIPGERFFPSRGIRQGDPLSPYLFILC 662
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 52.8 bits (125), Expect(2) = 3e-12
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINLPSQ 141
R +T NV++A E H K K K Y+ +KLD+ KA+D +EW F+ M+ + P++
Sbjct: 553 RLITDNVLVAYECFHFLRKKKTGKKGYLGLKLDMSKAYDRVEWCFLENMMLKLGFPTR 610
Score = 43.9 bits (102), Expect(2) = 3e-12
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILC 4
G P+ F PSRG+RQGDP+SP LF++C
Sbjct: 630 GQPSRNFFPSRGLRQGDPLSPFLFVVC 656
>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 970
Score = 48.9 bits (115), Expect(2) = 3e-12
Identities = 21/50 (42%), Positives = 34/50 (68%)
Frame = -3
Query: 299 NVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINL 150
N+++ QE +HS + K K +ML+KLDLEKA+D + W+F++ L + L
Sbjct: 263 NIVLVQEAVHSMRRKKGRKG-WMLLKLDLEKAYDRIRWNFLQETLVATGL 311
Score = 47.8 bits (112), Expect(2) = 3e-12
Identities = 18/28 (64%), Positives = 25/28 (89%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILCM 1
G TD F+P+RG+RQGDP+SP+LF+LC+
Sbjct: 334 GGKTDSFVPARGLRQGDPLSPYLFVLCL 361
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 49.3 bits (116), Expect(2) = 3e-12
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -3
Query: 299 NVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINL 150
N+++ QE +HS + K K +ML+KLDLEKA+D + W F+ L + L
Sbjct: 365 NIVVVQEAVHSMRRKKGRKG-WMLLKLDLEKAYDRIRWDFLAETLEAAGL 413
Score = 47.4 bits (111), Expect(2) = 3e-12
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILCM 1
G TD F P RG+RQGDPISP+LF+LC+
Sbjct: 436 GEKTDSFTPERGLRQGDPISPYLFVLCI 463
>gb|EOY02808.1| Uncharacterized protein TCM_017202 [Theobroma cacao]
Length = 546
Score = 58.2 bits (139), Expect(2) = 5e-12
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINLP 147
R + N+++AQ+V+HSFHK + K +M++K+DLEKA+D L W FI L +P
Sbjct: 33 RHIVDNIVVAQKVVHSFHKKQGQKG-WMMVKIDLEKAYDRLRWEFIYDSLVEAQIP 87
Score = 38.1 bits (87), Expect(2) = 5e-12
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = -2
Query: 81 TPTDFFLPSRGIRQGDPISPHLFILCM 1
T +D F PSRG+RQG P++P+LF+LC+
Sbjct: 110 TCSDKFFPSRGVRQG-PLAPYLFVLCI 135
>gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
Length = 916
Score = 50.1 bits (118), Expect(2) = 1e-11
Identities = 18/50 (36%), Positives = 34/50 (68%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMML 165
R ++ N I+A E++H HK + + Y+ +K+D+ KA+D +EWSF+ ++
Sbjct: 427 RAISDNSIVAFELLHMMHKKNHGRQGYLALKIDMSKAYDRVEWSFLEALM 476
Score = 45.1 bits (105), Expect(2) = 1e-11
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILC 4
G P + +P RG+RQGDP+SP+LF+LC
Sbjct: 504 GNPVGYVIPQRGLRQGDPLSPYLFLLC 530
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 49.7 bits (117), Expect(2) = 1e-11
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMML 165
R ++ N I+A E++H HK + Y+ +K+D+ KA+D +EWSF+ ++
Sbjct: 907 RAISDNSIVAFELLHMMHKKNQGRQGYLALKIDMSKAYDRVEWSFLEALM 956
Score = 45.1 bits (105), Expect(2) = 1e-11
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILC 4
G P + +P RG+RQGDP+SP+LF+LC
Sbjct: 984 GNPVGYVIPQRGLRQGDPLSPYLFLLC 1010
>gb|EMJ14411.1| hypothetical protein PRUPE_ppb013620mg [Prunus persica]
Length = 993
Score = 50.8 bits (120), Expect(2) = 2e-11
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINLPS 144
R +T N++IAQE++H F K K + K+DL KA+D L W FI +L + LP+
Sbjct: 759 RHITDNIMIAQELMHKFKLAKGKKRMFAW-KIDLSKAYDRLNWGFIESVLLEVGLPN 814
Score = 43.5 bits (101), Expect(2) = 2e-11
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILCM 1
G TD F P GIRQGDP+SP+LF+LC+
Sbjct: 835 GELTDPFSPGNGIRQGDPLSPYLFVLCI 862
>ref|XP_002468277.1| hypothetical protein SORBIDRAFT_01g042855 [Sorghum bicolor]
gi|241922131|gb|EER95275.1| hypothetical protein
SORBIDRAFT_01g042855 [Sorghum bicolor]
Length = 575
Score = 61.2 bits (147), Expect(2) = 2e-11
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSINLP 147
R ++ N+II QE+IHSFH +K+ K+ L+KLDL KAFD LEW FI L + +P
Sbjct: 126 RHISANIIITQEIIHSFH-LKSWKDQAFLLKLDLAKAFDRLEWDFIMQALRRLGMP 180
Score = 32.7 bits (73), Expect(2) = 2e-11
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILCM 1
G T F RGIRQG P+SP+LFI+ +
Sbjct: 202 GEATAGFQSHRGIRQGCPLSPYLFIIAI 229
>gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus persica]
Length = 1171
Score = 48.1 bits (113), Expect(2) = 3e-11
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLH 162
R + N++I E+ H F K KN M IK+DLEKA+D L+W +IR L+
Sbjct: 566 RSIFDNILITHELFHDF-KHKNGSRGAMAIKIDLEKAYDLLDWKYIRGCLN 615
Score = 45.4 bits (106), Expect(2) = 3e-11
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILCM 1
G+P F SRGIRQGDP+SP++FILCM
Sbjct: 632 GSPYGHFKASRGIRQGDPLSPYIFILCM 659
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 48.9 bits (115), Expect(2) = 4e-11
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = -3
Query: 314 RRLTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMMLHSI 156
R ++ N++IAQE+ H + K+ +M IK D+ KA+D +EW+FI +L +
Sbjct: 328 RLISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKM 380
Score = 44.3 bits (103), Expect(2) = 4e-11
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILC 4
G P +P RG+RQGDP+SP+LFILC
Sbjct: 405 GQPKGLIIPERGLRQGDPLSPYLFILC 431
>ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 888
Score = 48.1 bits (113), Expect(2) = 4e-11
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -2
Query: 84 GTPTDFFLPSRGIRQGDPISPHLFILC 4
G PT+ PSRGIRQGDP+SP+LFILC
Sbjct: 189 GKPTEVISPSRGIRQGDPLSPYLFILC 215
Score = 45.1 bits (105), Expect(2) = 4e-11
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3
Query: 308 LTGNVIIAQEVIHSFHKMKNNKNPYMLIKLDLEKAFDCLEWSFIRMML 165
++ N +IA EV H H ++ + + +KLD+ KA+D LEW F+ L
Sbjct: 114 ISDNTLIATEVAHFMHALRKQQEGFFSLKLDISKAYDRLEWHFLEAKL 161