BLASTX nr result

ID: Catharanthus22_contig00047453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00047453
         (314 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, part...    44   2e-06

>ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, partial [Capsella rubella]
           gi|482564485|gb|EOA28675.1| hypothetical protein
           CARUB_v10024899mg, partial [Capsella rubella]
          Length = 451

 Score = 43.5 bits (101), Expect(2) = 2e-06
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = +1

Query: 145 RLCLMNLLKDFFSIKFHLIENYNKALHEGPWFIGQHFIAIRPWEPQF 285
           R+ +M+L + FF ++F L E Y  AL  GPW +  +++ ++ W P F
Sbjct: 108 RMYVMDLPRHFFMVRFELEEEYLNALTGGPWRVFGNYLMVQQWSPNF 154



 Score = 33.9 bits (76), Expect(2) = 2e-06
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 41  IYDLW*TSLLVKVYGRTTDFKFLQSKLVELWKPT 142
           ++ LW   ++VKV GR      L  KL ELWKP+
Sbjct: 73  MHGLWKNCMIVKVLGRQIPVAVLNRKLKELWKPS 106


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