BLASTX nr result
ID: Catharanthus22_contig00047293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00047293
(338 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 57 2e-08
gb|AAM22834.1|AF427791_26 Sukkula-1b polyprotein [Hordeum vulgar... 58 3e-08
gb|AAM22833.1|AF427791_25 Sukkula-1a polyprotein [Hordeum vulgar... 58 3e-08
gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare] 57 5e-08
ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266... 54 2e-07
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] 61 2e-07
ref|XP_004974780.1| PREDICTED: uncharacterized protein LOC101776... 53 2e-07
ref|XP_004958871.1| PREDICTED: uncharacterized protein LOC101785... 52 3e-07
gb|AAL70114.1|AC099733_5 Putative polyprotein [Oryza sativa] gi|... 54 3e-07
ref|XP_004980645.1| PREDICTED: proline-, glutamic acid- and leuc... 52 3e-07
gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo] 60 4e-07
gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo] 60 4e-07
gb|ADN33714.1| ty3-gypsy retrotransposon protein [Cucumis melo s... 59 7e-07
gb|ABF95988.1| retrotransposon protein, putative, unclassified [... 52 8e-07
ref|XP_002316679.1| predicted protein [Populus trichocarpa] 59 9e-07
ref|XP_004958870.1| PREDICTED: uncharacterized protein LOC101785... 51 1e-06
ref|XP_004229040.1| PREDICTED: uncharacterized protein LOC101252... 58 1e-06
ref|XP_002338324.1| predicted protein [Populus trichocarpa] 58 1e-06
gb|AAT38742.2| 'chromo' domain containing protein [Solanum demis... 58 1e-06
ref|XP_004242076.1| PREDICTED: uncharacterized protein LOC101251... 56 2e-06
>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
Length = 1771
Score = 57.0 bits (136), Expect(2) = 2e-08
Identities = 25/73 (34%), Positives = 46/73 (63%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
+W +F E F ++ +R+R D+F +L+Q M V++Y +F+ L+++ ++ TEE +
Sbjct: 370 SWSEFSEAFLARFMPRSVRDRLRDQFSRLEQGPMTVSEYETRFHELSRHATMILPTEEER 429
Query: 278 TR*FVKGLRVDLQ 316
R FV+GLR L+
Sbjct: 430 VRCFVRGLRYRLR 442
Score = 26.9 bits (58), Expect(2) = 2e-08
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 1 ARRVTFTAFRLRGAAKDWWLRISEAQ 78
+R FTA + RG A+ WW E++
Sbjct: 337 SRGADFTAHQFRGPARQWWRSYRESR 362
>gb|AAM22834.1|AF427791_26 Sukkula-1b polyprotein [Hordeum vulgare subsp. vulgare]
Length = 685
Score = 57.8 bits (138), Expect(2) = 3e-08
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = +2
Query: 89 QLWTWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTE 268
++ +WE+F +F+ YI E ++F++LKQ G V +Y V+F+ LA+Y L+ I +
Sbjct: 145 RVMSWEEFCRDFRSHYIPSSFVEEMREKFRRLKQGGNSVYKYNVEFHELARYALQDIPDQ 204
Query: 269 EHKTR*FVKGLRVDLQGALAL 331
+ K F GL+ +LQ ALAL
Sbjct: 205 KSKIYQFRGGLKENLQLALAL 225
Score = 25.8 bits (55), Expect(2) = 3e-08
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +1
Query: 10 VTFTAFRLRGAAKDWWLRISEAQ 78
V F F+L+G A WW ++ +++
Sbjct: 120 VKFATFQLKGQASIWWQQLKDSR 142
>gb|AAM22833.1|AF427791_25 Sukkula-1a polyprotein [Hordeum vulgare subsp. vulgare]
Length = 685
Score = 57.8 bits (138), Expect(2) = 3e-08
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = +2
Query: 89 QLWTWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTE 268
++ +WE+F +F+ YI E ++F++LKQ G V +Y V+F+ LA+Y L+ I +
Sbjct: 145 RVMSWEEFCRDFRSHYIPSSFVEEMREKFRRLKQGGNSVYKYNVEFHELARYALQDIPDQ 204
Query: 269 EHKTR*FVKGLRVDLQGALAL 331
+ K F GL+ +LQ ALAL
Sbjct: 205 KSKIYQFRGGLKENLQLALAL 225
Score = 25.8 bits (55), Expect(2) = 3e-08
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +1
Query: 10 VTFTAFRLRGAAKDWWLRISEAQ 78
V F F+L+G A WW ++ +++
Sbjct: 120 VKFATFQLKGQASIWWQQLKDSR 142
>gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare]
Length = 1486
Score = 57.0 bits (136), Expect(2) = 5e-08
Identities = 31/90 (34%), Positives = 53/90 (58%)
Frame = +2
Query: 62 EFLKLNLRNQLWTWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAK 241
+ LK + ++ +W++F +F+ YI E ++F++LKQ V +Y V+F+ LA+
Sbjct: 135 QHLKDSRGGRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGNNSVYKYNVEFHELAR 194
Query: 242 YCLRLIDTEEHKTR*FVKGLRVDLQGALAL 331
Y L+ + ++ K F GL+ DLQ ALAL
Sbjct: 195 YALQDVPDQKSKIYQFRGGLKEDLQLALAL 224
Score = 25.4 bits (54), Expect(2) = 5e-08
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 10 VTFTAFRLRGAAKDWWLRISEAQ 78
V F F+L+G A WW + +++
Sbjct: 119 VKFATFQLKGQASIWWQHLKDSR 141
>ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266468 [Solanum
lycopersicum]
Length = 927
Score = 53.9 bits (128), Expect(2) = 2e-07
Identities = 24/73 (32%), Positives = 44/73 (60%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
+W +F E F ++ +R+R D+F +L+Q M V++Y F+ L+++ ++ TE +
Sbjct: 250 SWSEFSEAFLARFMQRSVRDRLRDQFSRLEQGSMTVSEYEAMFHELSRHATMILPTEGER 309
Query: 278 TR*FVKGLRVDLQ 316
R FV+GLR L+
Sbjct: 310 IRCFVRGLRYRLR 322
Score = 26.9 bits (58), Expect(2) = 2e-07
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 1 ARRVTFTAFRLRGAAKDWWLRISEAQ 78
+R FTA + RG A+ WW E++
Sbjct: 217 SRGADFTAHQFRGQARQWWRTYRESR 242
>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
Length = 1475
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/73 (36%), Positives = 49/73 (67%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
+W++F E F ++I +R+R D+F +L+Q M VA+Y +F+ L+++ ++ TEE +
Sbjct: 211 SWDEFSEAFLAKFIPRSVRDRLRDQFCRLEQGSMSVAEYETRFHELSRHAEMILPTEEER 270
Query: 278 TR*FVKGLRVDLQ 316
R FV+GLR+ L+
Sbjct: 271 VRCFVRGLRLQLR 283
>ref|XP_004974780.1| PREDICTED: uncharacterized protein LOC101776409 [Setaria italica]
Length = 586
Score = 53.1 bits (126), Expect(2) = 2e-07
Identities = 24/68 (35%), Positives = 41/68 (60%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
TWE+F+ F+ +I + + + EF LKQ M V++Y KF +L++Y +DT+E +
Sbjct: 68 TWEEFRNSFRTHHIPAGVMKLKQKEFLALKQGNMTVSEYRDKFTQLSRYAPNEVDTDEKR 127
Query: 278 TR*FVKGL 301
+ F+ GL
Sbjct: 128 QKRFLDGL 135
Score = 27.3 bits (59), Expect(2) = 2e-07
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 7 RVTFTAFRLRGAAKDWW 57
+V + A RL GAA DWW
Sbjct: 38 KVLYAAGRLEGAAADWW 54
>ref|XP_004958871.1| PREDICTED: uncharacterized protein LOC101785860 [Setaria italica]
Length = 890
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
TWE+F+ F+ +I + + + EF LKQ M V++Y KF +L++Y +DT+E +
Sbjct: 68 TWEEFRNSFRTHHIPAGVMKLKQKEFLALKQGNMTVSEYRDKFTQLSRYAPNEVDTDEKR 127
Query: 278 TR*FVKGL 301
F+ GL
Sbjct: 128 QERFLDGL 135
Score = 27.3 bits (59), Expect(2) = 3e-07
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 7 RVTFTAFRLRGAAKDWW 57
+V + A RL GAA DWW
Sbjct: 38 KVLYAAGRLEGAAADWW 54
>gb|AAL70114.1|AC099733_5 Putative polyprotein [Oryza sativa]
gi|18642695|gb|AAL76187.1|AC074283_17 Putative
polyprotein [Oryza sativa] gi|31430086|gb|AAP52050.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 382
Score = 53.5 bits (127), Expect(2) = 3e-07
Identities = 27/77 (35%), Positives = 47/77 (61%)
Frame = +2
Query: 83 RNQLWTWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLID 262
+ Q TWE+F E F++ +I + + EF+ LKQ+ V +Y +FNRLA+Y L +
Sbjct: 122 KGQPITWEEFIEGFRKTHIPAGVVTLKKREFRTLKQKDHTVTEYLHEFNRLARYALEDVR 181
Query: 263 TEEHKTR*FVKGLRVDL 313
T++ + F++GL+ +L
Sbjct: 182 TDKERQEKFLEGLKDEL 198
Score = 26.2 bits (56), Expect(2) = 3e-07
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 7 RVTFTAFRLRGAAKDWW 57
+V FT+ +L+G A +WW
Sbjct: 97 KVVFTSHQLQGPASEWW 113
>ref|XP_004980645.1| PREDICTED: proline-, glutamic acid- and leucine-rich protein 1-like
[Setaria italica]
Length = 297
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
TWE+F+ F+ +I + + + EF LKQ M+V +Y KF +L++Y +DT+E +
Sbjct: 222 TWEEFRNSFRTHHIPAGVMKLKQKEFLALKQGNMIVREYRDKFTQLSRYAPNEVDTDEKR 281
Query: 278 TR*FVKGL 301
F+ GL
Sbjct: 282 QECFLDGL 289
Score = 27.3 bits (59), Expect(2) = 3e-07
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 7 RVTFTAFRLRGAAKDWW 57
+V + A RL GAA DWW
Sbjct: 192 KVLYAAGRLEGAAADWW 208
>gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]
Length = 871
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
TW+ F+E F ++ LR+ EF L+Q M V QY +F+ L+++ +I TE +
Sbjct: 405 TWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAAR 464
Query: 278 TR*FVKGLRVDLQG 319
FV+GLR+D+QG
Sbjct: 465 ADKFVRGLRLDIQG 478
>gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo]
Length = 429
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
TW+ F+E F ++ LR+ EF L+Q M V QY +F+ L+++ +I TE +
Sbjct: 133 TWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAAR 192
Query: 278 TR*FVKGLRVDLQG 319
FV+GLR+D+QG
Sbjct: 193 ADKFVRGLRLDIQG 206
>gb|ADN33714.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
Length = 285
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +2
Query: 86 NQLWTWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDT 265
NQ+ TW+ F+E F +++ LR+ EF LKQ M V +Y +F+ L+ + L++T
Sbjct: 154 NQI-TWDQFKESFYAKFLPSSLRDAKRQEFINLKQGQMTVEEYDYEFDMLSLFAPELVET 212
Query: 266 EEHKTR*FVKGLRVDLQG 319
E + + FV GLR DLQG
Sbjct: 213 EAARAKMFVWGLRKDLQG 230
>gb|ABF95988.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 365
Score = 52.4 bits (124), Expect(2) = 8e-07
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
TW +F E FK+ +I + + EF+ LKQ+ V +Y +FNRLA+Y + T+E +
Sbjct: 127 TWAEFTEAFKKTHIPAGVVALKKREFRALKQKDRTVTEYLHEFNRLARYAPEDVRTDEER 186
Query: 278 TR*FVKGLRVDL 313
F++GL+ +L
Sbjct: 187 QEKFLEGLKDEL 198
Score = 26.2 bits (56), Expect(2) = 8e-07
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 7 RVTFTAFRLRGAAKDWW 57
+V FT+ +L+G A +WW
Sbjct: 97 KVVFTSHQLQGPASEWW 113
>ref|XP_002316679.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +2
Query: 95 WTWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEH 274
WTW++F F ++ +R+ EF++L Q M V +Y +KFN+L++Y L+ TEE
Sbjct: 68 WTWKEFSSMFLDMFLPQSIRDARLYEFERLSQGSMTVDEYDLKFNQLSRYAEHLLPTEEW 127
Query: 275 KTR*FVKGLR 304
+ + F++GL+
Sbjct: 128 RVKRFIRGLK 137
>ref|XP_004958870.1| PREDICTED: uncharacterized protein LOC101785453 [Setaria italica]
Length = 205
Score = 50.8 bits (120), Expect(2) = 1e-06
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
TWE+F+ F+ +I + + + EF LKQ M V++Y KF +L++Y +DT+E +
Sbjct: 68 TWEEFRNSFRTHHIPAGVMKLKQKEFLALKQGNMTVSEYRDKFTQLSRYAPNEVDTDEKR 127
Query: 278 TR*FVKG 298
F+ G
Sbjct: 128 QERFLDG 134
Score = 27.3 bits (59), Expect(2) = 1e-06
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 7 RVTFTAFRLRGAAKDWW 57
+V + A RL GAA DWW
Sbjct: 38 KVLYAAGRLEGAAADWW 54
>ref|XP_004229040.1| PREDICTED: uncharacterized protein LOC101252810 [Solanum
lycopersicum]
Length = 223
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
TW F F ++YI LR+R DEF L+Q M V Y KF L++Y +L + + +
Sbjct: 147 TWTSFSSFFMEKYIPRTLRDRKRDEFLSLEQGRMSVNAYEAKFRALSRYATQLCFSPQER 206
Query: 278 TR*FVKGLRVDL 313
R FVKGLR +L
Sbjct: 207 IRRFVKGLRSEL 218
>ref|XP_002338324.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/70 (34%), Positives = 44/70 (62%)
Frame = +2
Query: 95 WTWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEH 274
WTW++F F ++ +R+ EF++L Q M V +Y +KF +L++Y + L+ TEE
Sbjct: 188 WTWKEFSTMFLDRFLPQSVRDAQFYEFERLSQGNMTVDEYDLKFTQLSRYAVHLLPTEEW 247
Query: 275 KTR*FVKGLR 304
+ + F++GL+
Sbjct: 248 RVKRFIRGLK 257
>gb|AAT38742.2| 'chromo' domain containing protein [Solanum demissum]
Length = 815
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/68 (42%), Positives = 43/68 (63%)
Frame = +2
Query: 110 FQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHKTR*F 289
F F ++Y+ LR+R +D+F L+Q GM VA Y KF+ L++Y +L+ TEE + F
Sbjct: 121 FHALFLEKYVPWTLRDRKKDKFMALEQGGMFVAAYQAKFHPLSRYATQLVITEEERICLF 180
Query: 290 VKGLRVDL 313
VKGL +L
Sbjct: 181 VKGLNSEL 188
>ref|XP_004242076.1| PREDICTED: uncharacterized protein LOC101251787 [Solanum
lycopersicum]
Length = 945
Score = 55.8 bits (133), Expect(2) = 2e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +2
Query: 98 TWEDFQEEFKQEYILCWLRERHEDEFQQLKQEGMMVAQYTVKFNRLAKYCLRLIDTEEHK 277
+W +F E F +++ +R+R D+F +L+Q M V++Y +F+ L+++ ++ TE +
Sbjct: 257 SWSEFSEAFLAQFMPQSVRDRLRDQFSRLEQVSMTVSEYEARFHELSRHATMILPTEGER 316
Query: 278 TR*FVKGLRVDLQ 316
R FV+GLR L+
Sbjct: 317 VRCFVRGLRYRLR 329
Score = 21.6 bits (44), Expect(2) = 2e-06
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 1 ARRVTFTAFRLRGAAKDWW 57
+R FTA + R + WW
Sbjct: 224 SRGADFTAHQFRRPGRQWW 242