BLASTX nr result
ID: Catharanthus22_contig00047018
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00047018 (316 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EMJ26295.1| hypothetical protein PRUPE_ppa016436mg [Prunus pe... 59 7e-07 gb|EMJ06298.1| hypothetical protein PRUPE_ppa014622mg [Prunus pe... 58 1e-06 gb|EXB29325.1| Putative mediator of RNA polymerase II transcript... 57 2e-06 ref|XP_006481684.1| PREDICTED: mediator of RNA polymerase II tra... 57 2e-06 ref|XP_006429955.1| hypothetical protein CICLE_v10012936mg [Citr... 57 2e-06 ref|XP_004238356.1| PREDICTED: mediator of RNA polymerase II tra... 57 2e-06 ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II tra... 57 2e-06 ref|XP_004303373.1| PREDICTED: mediator of RNA polymerase II tra... 57 3e-06 >gb|EMJ26295.1| hypothetical protein PRUPE_ppa016436mg [Prunus persica] Length = 166 Score = 58.9 bits (141), Expect = 7e-07 Identities = 27/37 (72%), Positives = 32/37 (86%) Frame = -2 Query: 312 GEN*TTDDVLPSLEEQGVRQLYPKGPNVGMVIAVLLL 202 G N TTDD+LPSLE+QGVRQLYPKGPN+ M +VL+L Sbjct: 21 GGNYTTDDILPSLEDQGVRQLYPKGPNIAMPPSVLVL 57 >gb|EMJ06298.1| hypothetical protein PRUPE_ppa014622mg [Prunus persica] Length = 184 Score = 58.2 bits (139), Expect = 1e-06 Identities = 28/42 (66%), Positives = 34/42 (80%), Gaps = 2/42 (4%) Frame = -2 Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNVGM--VIAVLLLKF 196 +G N TTDD+LPSLE+QGVRQLYPKGPN+ M I VL++ F Sbjct: 38 YGGNYTTDDILPSLEDQGVRQLYPKGPNIAMPPSIPVLIIYF 79 >gb|EXB29325.1| Putative mediator of RNA polymerase II transcription subunit 7 [Morus notabilis] Length = 181 Score = 57.4 bits (137), Expect = 2e-06 Identities = 26/29 (89%), Positives = 27/29 (93%) Frame = -2 Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229 FG N TTDDVLPS+EEQGVRQLYPKGPNV Sbjct: 40 FGANYTTDDVLPSMEEQGVRQLYPKGPNV 68 >ref|XP_006481684.1| PREDICTED: mediator of RNA polymerase II transcription subunit 7a-like [Citrus sinensis] Length = 168 Score = 57.4 bits (137), Expect = 2e-06 Identities = 26/29 (89%), Positives = 27/29 (93%) Frame = -2 Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229 FG N TTDDVLPSLEEQGVRQLYPKGPN+ Sbjct: 40 FGGNYTTDDVLPSLEEQGVRQLYPKGPNI 68 >ref|XP_006429955.1| hypothetical protein CICLE_v10012936mg [Citrus clementina] gi|557532012|gb|ESR43195.1| hypothetical protein CICLE_v10012936mg [Citrus clementina] Length = 168 Score = 57.4 bits (137), Expect = 2e-06 Identities = 26/29 (89%), Positives = 27/29 (93%) Frame = -2 Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229 FG N TTDDVLPSLEEQGVRQLYPKGPN+ Sbjct: 40 FGGNYTTDDVLPSLEEQGVRQLYPKGPNI 68 >ref|XP_004238356.1| PREDICTED: mediator of RNA polymerase II transcription subunit 7b-like [Solanum lycopersicum] gi|565350175|ref|XP_006342049.1| PREDICTED: mediator of RNA polymerase II transcription subunit 7a-like [Solanum tuberosum] Length = 168 Score = 57.4 bits (137), Expect = 2e-06 Identities = 26/29 (89%), Positives = 27/29 (93%) Frame = -2 Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229 FG N TTDDVLP+LEEQGVRQLYPKGPNV Sbjct: 40 FGSNYTTDDVLPNLEEQGVRQLYPKGPNV 68 >ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II transcription subunit 7b-like [Cucumis sativus] Length = 168 Score = 57.4 bits (137), Expect = 2e-06 Identities = 26/29 (89%), Positives = 27/29 (93%) Frame = -2 Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229 FG N TTDDVLPSLEEQGVRQLYP+GPNV Sbjct: 40 FGSNYTTDDVLPSLEEQGVRQLYPRGPNV 68 >ref|XP_004303373.1| PREDICTED: mediator of RNA polymerase II transcription subunit 7b-like [Fragaria vesca subsp. vesca] Length = 175 Score = 56.6 bits (135), Expect = 3e-06 Identities = 25/29 (86%), Positives = 27/29 (93%) Frame = -2 Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229 +G N TTDDVLPSLEEQGVRQLYPKGPN+ Sbjct: 40 YGANYTTDDVLPSLEEQGVRQLYPKGPNI 68