BLASTX nr result

ID: Catharanthus22_contig00047018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00047018
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ26295.1| hypothetical protein PRUPE_ppa016436mg [Prunus pe...    59   7e-07
gb|EMJ06298.1| hypothetical protein PRUPE_ppa014622mg [Prunus pe...    58   1e-06
gb|EXB29325.1| Putative mediator of RNA polymerase II transcript...    57   2e-06
ref|XP_006481684.1| PREDICTED: mediator of RNA polymerase II tra...    57   2e-06
ref|XP_006429955.1| hypothetical protein CICLE_v10012936mg [Citr...    57   2e-06
ref|XP_004238356.1| PREDICTED: mediator of RNA polymerase II tra...    57   2e-06
ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II tra...    57   2e-06
ref|XP_004303373.1| PREDICTED: mediator of RNA polymerase II tra...    57   3e-06

>gb|EMJ26295.1| hypothetical protein PRUPE_ppa016436mg [Prunus persica]
          Length = 166

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -2

Query: 312 GEN*TTDDVLPSLEEQGVRQLYPKGPNVGMVIAVLLL 202
           G N TTDD+LPSLE+QGVRQLYPKGPN+ M  +VL+L
Sbjct: 21  GGNYTTDDILPSLEDQGVRQLYPKGPNIAMPPSVLVL 57


>gb|EMJ06298.1| hypothetical protein PRUPE_ppa014622mg [Prunus persica]
          Length = 184

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/42 (66%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
 Frame = -2

Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNVGM--VIAVLLLKF 196
           +G N TTDD+LPSLE+QGVRQLYPKGPN+ M   I VL++ F
Sbjct: 38  YGGNYTTDDILPSLEDQGVRQLYPKGPNIAMPPSIPVLIIYF 79


>gb|EXB29325.1| Putative mediator of RNA polymerase II transcription subunit 7
           [Morus notabilis]
          Length = 181

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -2

Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229
           FG N TTDDVLPS+EEQGVRQLYPKGPNV
Sbjct: 40  FGANYTTDDVLPSMEEQGVRQLYPKGPNV 68


>ref|XP_006481684.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7a-like [Citrus sinensis]
          Length = 168

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -2

Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229
           FG N TTDDVLPSLEEQGVRQLYPKGPN+
Sbjct: 40  FGGNYTTDDVLPSLEEQGVRQLYPKGPNI 68


>ref|XP_006429955.1| hypothetical protein CICLE_v10012936mg [Citrus clementina]
           gi|557532012|gb|ESR43195.1| hypothetical protein
           CICLE_v10012936mg [Citrus clementina]
          Length = 168

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -2

Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229
           FG N TTDDVLPSLEEQGVRQLYPKGPN+
Sbjct: 40  FGGNYTTDDVLPSLEEQGVRQLYPKGPNI 68


>ref|XP_004238356.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like [Solanum lycopersicum]
           gi|565350175|ref|XP_006342049.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 7a-like [Solanum
           tuberosum]
          Length = 168

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -2

Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229
           FG N TTDDVLP+LEEQGVRQLYPKGPNV
Sbjct: 40  FGSNYTTDDVLPNLEEQGVRQLYPKGPNV 68


>ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like [Cucumis sativus]
          Length = 168

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -2

Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229
           FG N TTDDVLPSLEEQGVRQLYP+GPNV
Sbjct: 40  FGSNYTTDDVLPSLEEQGVRQLYPRGPNV 68


>ref|XP_004303373.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like [Fragaria vesca subsp. vesca]
          Length = 175

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -2

Query: 315 FGEN*TTDDVLPSLEEQGVRQLYPKGPNV 229
           +G N TTDDVLPSLEEQGVRQLYPKGPN+
Sbjct: 40  YGANYTTDDVLPSLEEQGVRQLYPKGPNI 68


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