BLASTX nr result
ID: Catharanthus22_contig00047006
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00047006
(232 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251... 114 2e-23
ref|XP_006470277.1| PREDICTED: pentatricopeptide repeat-containi... 111 1e-22
gb|EMJ16196.1| hypothetical protein PRUPE_ppa002316mg [Prunus pe... 110 1e-22
gb|EOY02469.1| Pentatricopeptide repeat superfamily protein [The... 108 1e-21
ref|XP_006446557.1| hypothetical protein CICLE_v10017927mg, part... 107 2e-21
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,... 106 4e-21
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245... 103 2e-20
emb|CBI34885.3| unnamed protein product [Vitis vinifera] 103 2e-20
emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera] 103 2e-20
gb|EPS64538.1| hypothetical protein M569_10241, partial [Genlise... 101 1e-19
ref|XP_006338794.1| PREDICTED: uncharacterized protein LOC102581... 82 6e-14
ref|XP_002306741.1| pentatricopeptide repeat-containing family p... 66 4e-09
ref|XP_006849644.1| hypothetical protein AMTR_s00024p00225420 [A... 65 7e-09
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis... 64 3e-08
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
gb|EMJ17743.1| hypothetical protein PRUPE_ppb007734mg [Prunus pe... 61 1e-07
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,... 59 5e-07
gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis] 59 9e-07
ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [S... 57 2e-06
>ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251951 [Solanum
lycopersicum]
Length = 1933
Score = 114 bits (284), Expect = 2e-23
Identities = 54/77 (70%), Positives = 63/77 (81%)
Frame = +1
Query: 1 QGAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANV 180
+GA HG LIK G+SS++ IA KLL MYL RK EIN MLKEF GF+LV+HNCLI AN+
Sbjct: 38 EGAMFHGHLIKKGVSSQKNIAAKLLIMYLKSRKPNEINQMLKEFEGFNLVIHNCLITANI 97
Query: 181 EWGELDEARRLFDEMPE 231
EWG+LDEARRLF+EMPE
Sbjct: 98 EWGKLDEARRLFEEMPE 114
>ref|XP_006470277.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Citrus sinensis]
Length = 734
Score = 111 bits (277), Expect = 1e-22
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +1
Query: 1 QGAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANV 180
QG ALHG LIK G+ ERY+ +LL MYL RKS E N ++K+ NGFDLVVHNC+INANV
Sbjct: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANV 98
Query: 181 EWGELDEARRLFDEMPE 231
+WG L+EA+RLFD MPE
Sbjct: 99 QWGNLEEAQRLFDGMPE 115
>gb|EMJ16196.1| hypothetical protein PRUPE_ppa002316mg [Prunus persica]
Length = 688
Score = 110 bits (276), Expect = 1e-22
Identities = 50/73 (68%), Positives = 63/73 (86%)
Frame = +1
Query: 13 LHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANVEWGE 192
LH LIKMG+SSERYIA++LL MYL+ RKS +++ ++K F+GFD VHNCLINAN++WG
Sbjct: 3 LHNHLIKMGLSSERYIAIRLLIMYLDSRKSAQVSEIVKGFDGFDPTVHNCLINANIQWGN 62
Query: 193 LDEARRLFDEMPE 231
LD+ARRLFDEMPE
Sbjct: 63 LDQARRLFDEMPE 75
>gb|EOY02469.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 728
Score = 108 bits (269), Expect = 1e-21
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = +1
Query: 4 GAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANVE 183
G LHG L K G+ SER+IA+KLL MYLN RK E N ++KE +GFDLVV NCLINANV+
Sbjct: 40 GTLLHGLLFKKGVFSERFIAIKLLIMYLNFRKLPEANQIVKELDGFDLVVRNCLINANVQ 99
Query: 184 WGELDEARRLFDEMPE 231
WG L EAR+LFDEMPE
Sbjct: 100 WGNLGEARKLFDEMPE 115
>ref|XP_006446557.1| hypothetical protein CICLE_v10017927mg, partial [Citrus clementina]
gi|557549168|gb|ESR59797.1| hypothetical protein
CICLE_v10017927mg, partial [Citrus clementina]
Length = 735
Score = 107 bits (266), Expect = 2e-21
Identities = 48/74 (64%), Positives = 59/74 (79%)
Frame = +1
Query: 10 ALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANVEWG 189
ALHG LIK G+ ERY+ +LL MYL RKS E N ++K+ NGFDLVVHNC+INAN++WG
Sbjct: 2 ALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWG 61
Query: 190 ELDEARRLFDEMPE 231
L+EA+RLFD MPE
Sbjct: 62 NLEEAQRLFDGMPE 75
>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 2000
Score = 106 bits (264), Expect = 4e-21
Identities = 50/76 (65%), Positives = 64/76 (84%)
Frame = +1
Query: 4 GAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANVE 183
G+ALH L K G+SSE+YI++KLL MYLN RKS E + + K+F+GFDLVVHNC+I+ANV+
Sbjct: 40 GSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISANVQ 99
Query: 184 WGELDEARRLFDEMPE 231
G LDEAR+LFDEMP+
Sbjct: 100 RGNLDEARKLFDEMPQ 115
>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 103 bits (258), Expect = 2e-20
Identities = 50/77 (64%), Positives = 61/77 (79%)
Frame = +1
Query: 1 QGAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANV 180
QG LH LIK G SS+RYIA+KLL +YLNCRK EI+ ++KEF+G DLVV NC+I+A V
Sbjct: 39 QGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYV 98
Query: 181 EWGELDEARRLFDEMPE 231
+WG L +AR LFDEMPE
Sbjct: 99 QWGNLVQARLLFDEMPE 115
>emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 103 bits (258), Expect = 2e-20
Identities = 50/77 (64%), Positives = 61/77 (79%)
Frame = +1
Query: 1 QGAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANV 180
QG LH LIK G SS+RYIA+KLL +YLNCRK EI+ ++KEF+G DLVV NC+I+A V
Sbjct: 39 QGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYV 98
Query: 181 EWGELDEARRLFDEMPE 231
+WG L +AR LFDEMPE
Sbjct: 99 QWGNLVQARLLFDEMPE 115
>emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 103 bits (258), Expect = 2e-20
Identities = 50/77 (64%), Positives = 61/77 (79%)
Frame = +1
Query: 1 QGAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANV 180
QG LH LIK G SS+RYIA+KLL +YLNCRK EI+ ++KEF+G DLVV NC+I+A V
Sbjct: 39 QGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYV 98
Query: 181 EWGELDEARRLFDEMPE 231
+WG L +AR LFDEMPE
Sbjct: 99 QWGNLVQARLLFDEMPE 115
>gb|EPS64538.1| hypothetical protein M569_10241, partial [Genlisea aurea]
Length = 683
Score = 101 bits (251), Expect = 1e-19
Identities = 46/76 (60%), Positives = 61/76 (80%)
Frame = +1
Query: 4 GAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANVE 183
G A H LIK G+SSE Y+AVKLL MY++CR+ E+ MLKEF+GF+LVVHNCLI+A+++
Sbjct: 38 GKAFHCHLIKSGLSSENYLAVKLLIMYIDCRRFNEVGQMLKEFDGFNLVVHNCLISAHLQ 97
Query: 184 WGELDEARRLFDEMPE 231
WG +A ++FDEMPE
Sbjct: 98 WGSATDACKVFDEMPE 113
>ref|XP_006338794.1| PREDICTED: uncharacterized protein LOC102581133 [Solanum tuberosum]
Length = 1891
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/54 (70%), Positives = 46/54 (85%)
Frame = +1
Query: 70 LLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANVEWGELDEARRLFDEMPE 231
+L MYL K EI+ MLKEF+GF+LVVHNCLI AN+EWG+L+EARRLF+EMPE
Sbjct: 1 MLIMYLKSGKPNEIDQMLKEFDGFNLVVHNCLITANLEWGKLEEARRLFEEMPE 54
>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856190|gb|EEE93737.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 509
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/75 (41%), Positives = 49/75 (65%)
Frame = +1
Query: 1 QGAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANV 180
+GA LHG +IK+G+ ++++I +LNMY+NC E + GFD+V N +I
Sbjct: 115 EGAQLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLA 174
Query: 181 EWGELDEARRLFDEM 225
+ GE+D++RRLFD+M
Sbjct: 175 KCGEIDKSRRLFDKM 189
>ref|XP_006849644.1| hypothetical protein AMTR_s00024p00225420 [Amborella trichopoda]
gi|548853219|gb|ERN11225.1| hypothetical protein
AMTR_s00024p00225420 [Amborella trichopoda]
Length = 784
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 4 GAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFN--GFDLVVHNCLINAN 177
G +H L K+G S R++++KLL MY+ C + N + E DL+ NC+I+A
Sbjct: 55 GKVIHAHLTKLGFLSHRFLSLKLLIMYVRCNSFHDANSLFNEMGDRSSDLIASNCMISAY 114
Query: 178 VEWGELDEARRLFDEMPE 231
+ G D+A+RLFD+MPE
Sbjct: 115 SQMGLSDQAKRLFDKMPE 132
>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
gi|587904202|gb|EXB92403.1| hypothetical protein
L484_021387 [Morus notabilis]
Length = 530
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +1
Query: 4 GAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANVE 183
GA LHG +IK+G+ +R++ +++MY+NC E + E + DLV N +I +
Sbjct: 145 GAQLHGRVIKLGLDCDRFVRNTIIHMYINCGFLSEARQLFDESSELDLVAWNSMIMGLSK 204
Query: 184 WGELDEARRLFDEMP 228
GE+ E+RRLFD MP
Sbjct: 205 CGEVGESRRLFDRMP 219
>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 550
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = +1
Query: 4 GAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANVE 183
GA LHG ++K+G+ S++++ +++MY NC E + E FD+V N +I +
Sbjct: 140 GAQLHGRVVKLGLESDQFVRNTIIHMYSNCGLLSEARRVFDEDLEFDIVAWNSMIMGLSK 199
Query: 184 WGELDEARRLFDEMPE 231
GE+ E+RRLFD+MP+
Sbjct: 200 CGEVGESRRLFDKMPQ 215
>gb|EMJ17743.1| hypothetical protein PRUPE_ppb007734mg [Prunus persica]
Length = 297
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = +1
Query: 4 GAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANVE 183
GA LHG ++K+G+ S+++I +++MY NC E M E D V N +I +
Sbjct: 140 GAQLHGRILKLGLESDQFIRNTIIHMYANCGFLIEARRMFDEDLECDTVAWNSMIMGLSK 199
Query: 184 WGELDEARRLFDE 222
WGE+ EA+RLFD+
Sbjct: 200 WGEVSEAKRLFDK 212
>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product
[Vitis vinifera]
Length = 533
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +1
Query: 4 GAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANVE 183
GA LHG +IK+G+ + +I ++ MY NC E+ E FD+V N +I +
Sbjct: 144 GAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAK 203
Query: 184 WGELDEARRLFDEMP 228
GE+DE+R+LFDEMP
Sbjct: 204 CGEVDESRKLFDEMP 218
>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +1
Query: 1 QGAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANV 180
+GA LHG +IK+G+ ++ +I +L MY+NC + E + FD+V N +I
Sbjct: 140 EGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVA 199
Query: 181 EWGELDEARRLFDEM 225
+ G +DE+RRLFD+M
Sbjct: 200 KCGLVDESRRLFDKM 214
>gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis]
Length = 686
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +1
Query: 1 QGAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANV 180
+G +HG ++K+G ++++ L++MY C + + + DLV+ NCLI+
Sbjct: 137 EGKQIHGLVVKIGFGLDKFVQSSLVSMYSRCGEMGYARKVFDQMGEKDLVLWNCLIDGYA 196
Query: 181 EWGELDEARRLFDEMPE 231
GE++ A +LFDEMPE
Sbjct: 197 RCGEVEIALQLFDEMPE 213
>ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein
SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +1
Query: 4 GAALHGCLIKMGMSSERYIAVKLLNMYLNCRKSFEINHMLKEFNGFDLVVHNCLINANVE 183
GAALHG +K+G++ + Y+ + MY +C ++ E + + FD V N I A
Sbjct: 151 GAALHGMALKLGLAGDAYVRNATIAMYASCARADEALALFGQCPEFDAVACNSAIVALAR 210
Query: 184 WGELDEARRLFDEMPE 231
G +DEAR +FD MPE
Sbjct: 211 AGRVDEARAVFDGMPE 226