BLASTX nr result
ID: Catharanthus22_contig00046657
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00046657
(543 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi... 72 7e-11
emb|CBI30973.3| unnamed protein product [Vitis vinifera] 69 6e-10
ref|XP_002307219.2| hypothetical protein POPTR_0005s10540g [Popu... 67 4e-09
ref|XP_006350309.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
ref|XP_004247300.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
ref|XP_002521729.1| pentatricopeptide repeat-containing protein,... 63 5e-08
ref|XP_004308566.1| PREDICTED: pentatricopeptide repeat-containi... 62 7e-08
gb|EXC65018.1| hypothetical protein L484_000081 [Morus notabilis] 60 3e-07
gb|EXC26653.1| hypothetical protein L484_000875 [Morus notabilis] 60 3e-07
gb|EOX90638.1| Pentatricopeptide repeat-containing protein, puta... 59 6e-07
ref|XP_006467094.1| PREDICTED: pentatricopeptide repeat-containi... 59 1e-06
ref|XP_006425269.1| hypothetical protein CICLE_v10026953mg [Citr... 58 1e-06
gb|EMJ20684.1| hypothetical protein PRUPE_ppa022097mg, partial [... 57 3e-06
>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 72.4 bits (176), Expect = 7e-11
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = -1
Query: 540 SYSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWTESKNMIQKK 361
SYSPM+ C+KGDFQ A LFLQMVE I+PD +WN+++ CL +E +W E N+ +
Sbjct: 616 SYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLFHLQ 675
Query: 360 LQ 355
LQ
Sbjct: 676 LQ 677
>emb|CBI30973.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 69.3 bits (168), Expect = 6e-10
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = -1
Query: 540 SYSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWTESKNM 373
SYSPM+ C+KGDFQ A LFLQMVE I+PD +WN+++ CL +E +W E N+
Sbjct: 464 SYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNL 519
>ref|XP_002307219.2| hypothetical protein POPTR_0005s10540g [Populus trichocarpa]
gi|550338572|gb|EEE94215.2| hypothetical protein
POPTR_0005s10540g [Populus trichocarpa]
Length = 532
Score = 66.6 bits (161), Expect = 4e-09
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = -1
Query: 540 SYSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWTESKNMIQ 367
SYSP+I C K FQ A L LQMVE+GI PD WN+L CL ++ IW ES NM +
Sbjct: 464 SYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLFHCLSQQTIWLESNNMFR 521
>ref|XP_006350309.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Solanum tuberosum]
Length = 622
Score = 66.2 bits (160), Expect = 5e-09
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = -1
Query: 540 SYSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWTESKN 376
SY P I +CS+GDF A+ FLQMVE GIVPD WN L+ CL ++ W E N
Sbjct: 553 SYGPFIDVFCSRGDFHKAYMFFLQMVEKGIVPDYHLWNTLLVCLCQQTSWIEGNN 607
>ref|XP_004247300.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Solanum lycopersicum]
Length = 628
Score = 66.2 bits (160), Expect = 5e-09
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = -1
Query: 540 SYSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWTESKN 376
SY P I +CS+GDF A+ FLQMVE IVPD SWN L+ CL ++ W E N
Sbjct: 559 SYGPFIDVFCSRGDFHKAYMFFLQMVEKSIVPDCHSWNMLLVCLCQQTTWIEGNN 613
>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 629
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = -1
Query: 540 SYSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWTESKNM--IQ 367
+YSP+I C KG+FQ A +F QM+E GI PD +WN+L+ L +E IW E+KN+ +
Sbjct: 561 TYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKEIIWLENKNVFHVN 620
Query: 366 KKLQ 355
K+L+
Sbjct: 621 KQLE 624
>ref|XP_004308566.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 612
Score = 62.4 bits (150), Expect = 7e-08
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = -1
Query: 543 ESYSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWTESKNMI 370
+SYS ++ C KGDFQ A L QMVE GI PD +WN+L+ C E +W SK+M+
Sbjct: 543 DSYSHLVGVLCQKGDFQKALTLLFQMVEKGITPDHFTWNSLLVCTSLETVWLNSKSML 600
>gb|EXC65018.1| hypothetical protein L484_000081 [Morus notabilis]
Length = 363
Score = 60.5 bits (145), Expect = 3e-07
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = -1
Query: 540 SYSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWTESKNMIQK 364
SYSP++ C +GDFQ A + QMVE GI+PD C+W++L+ CL + E+ +M ++
Sbjct: 295 SYSPLVHALCREGDFQKASMMVSQMVEKGIIPDYCAWSSLILCLCKGKECLENNHMFRR 353
>gb|EXC26653.1| hypothetical protein L484_000875 [Morus notabilis]
Length = 626
Score = 60.5 bits (145), Expect = 3e-07
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = -1
Query: 540 SYSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWTESKNMIQK 364
SYSP++ C +GDFQ A + QMVE GI+PD C+W++L+ CL + E+ +M ++
Sbjct: 558 SYSPLVHALCREGDFQKASMMVSQMVEKGIIPDYCAWSSLILCLCKGKECLENNHMFRR 616
>gb|EOX90638.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 639
Score = 59.3 bits (142), Expect = 6e-07
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = -1
Query: 540 SYSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWTESKNMI 370
SYSP+I C KGD Q A L LQM++ I+PD +WN+++ CL +E W +SK +
Sbjct: 571 SYSPLINALCMKGDIQKAVMLLLQMLQKSIIPDDLTWNSVLVCLSQEREWLKSKKAL 627
>ref|XP_006467094.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Citrus sinensis]
Length = 618
Score = 58.5 bits (140), Expect = 1e-06
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = -1
Query: 537 YSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWTESKNMIQK 364
YSP+I C KG FQ+A L +QMV GI+PD +WN+L+ CL ++ W+ + + K
Sbjct: 561 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWSVNMSHFPK 618
>ref|XP_006425269.1| hypothetical protein CICLE_v10026953mg [Citrus clementina]
gi|557527259|gb|ESR38509.1| hypothetical protein
CICLE_v10026953mg [Citrus clementina]
Length = 621
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = -1
Query: 537 YSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFREAIWT 388
YSP+I C KG FQ+A L +QMV GI+PD +WN+L+ CL ++ W+
Sbjct: 561 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWS 610
>gb|EMJ20684.1| hypothetical protein PRUPE_ppa022097mg, partial [Prunus persica]
Length = 511
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = -1
Query: 540 SYSPMIMEYCSKGDFQTAHFLFLQMVEDGIVPDLCSWNALVECLFRE 400
SYSP++ C GDFQ A L LQMVE G++PD +WN+L+ CL +E
Sbjct: 464 SYSPLVAALCHMGDFQKALRLVLQMVEKGVIPDYFTWNSLLICLSQE 510