BLASTX nr result
ID: Catharanthus22_contig00046618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00046618
(307 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ00096.1| hypothetical protein PRUPE_ppa015748mg, partial [... 70 3e-10
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 69 5e-10
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 69 8e-10
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 66 4e-09
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe... 66 5e-09
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe... 66 5e-09
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe... 65 7e-09
gb|EMJ12193.1| hypothetical protein PRUPE_ppa021032mg [Prunus pe... 64 3e-08
gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon... 62 3e-08
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 63 4e-08
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 63 4e-08
gb|EMJ03130.1| hypothetical protein PRUPE_ppa017480mg [Prunus pe... 63 5e-08
gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [... 62 6e-08
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 62 6e-08
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 62 8e-08
ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein A... 62 1e-07
ref|XP_004295858.1| PREDICTED: uncharacterized protein LOC101314... 62 1e-07
gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [... 62 1e-07
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 61 1e-07
gb|EMJ13814.1| hypothetical protein PRUPE_ppa017091mg, partial [... 59 2e-07
>gb|EMJ00096.1| hypothetical protein PRUPE_ppa015748mg, partial [Prunus persica]
Length = 949
Score = 70.1 bits (170), Expect = 3e-10
Identities = 29/68 (42%), Positives = 43/68 (63%)
Frame = -1
Query: 295 RFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRFSSTC 116
+ +++ P+ F+ P RG+ Q D LSPY F+IC EG +I+H R L G++ SS+
Sbjct: 419 KLGIMVNGTPTGFIQPQRGLRQGDPLSPYLFLICTEGMTALIQHFAGRELLHGIKVSSSS 478
Query: 115 PPISHLFF 92
PP+SHL F
Sbjct: 479 PPLSHLLF 486
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V S+R+ VLI P + P+RG+ Q D LSPY F+IC E M++ A+++N GL+
Sbjct: 610 VKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKV 669
Query: 127 SSTCPPISHLFF 92
+ PPISHL F
Sbjct: 670 ARGAPPISHLLF 681
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 68.6 bits (166), Expect = 8e-10
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V S RFSVL+ PS P+RG+ Q D LSP+ F++C EG ++R A+ + + G++
Sbjct: 619 VTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVIHGVKI 678
Query: 127 SSTCPPISHLFF 92
PISHLFF
Sbjct: 679 GHRVSPISHLFF 690
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
+ ++++ VLI P + P RG+ Q D LSPY FI+C E IR A+R+NL G++
Sbjct: 394 ITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKV 453
Query: 127 SSTCPPISHLFF 92
++ P +SHL F
Sbjct: 454 ATPSPAVSHLLF 465
>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
Length = 1275
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V ++ +S L+ P+ L PTRG+ Q D LSPY F++C EGF ++ A+R+ G+
Sbjct: 574 VTTVSYSFLVNGEPTRILYPTRGLRQGDPLSPYLFLLCAEGFTTLLSKAERQGQLQGIVI 633
Query: 127 SSTCPPISHLFF 92
P +SHLFF
Sbjct: 634 CRGAPTVSHLFF 645
>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V ++ +S L+ P+ L PTRG+ Q D LSPY F++C EGF ++ A+R+ G+
Sbjct: 1028 VTTVSYSFLVNGEPTRILYPTRGLRQGDPLSPYLFLLCAEGFTTLLSKAERQGQLQGIVI 1087
Query: 127 SSTCPPISHLFF 92
P +SHLFF
Sbjct: 1088 CRGAPTVSHLFF 1099
>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
Length = 1011
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
+ ++ +S +I P FL P+RG+HQ D LSPY F++C EG +I +R G+
Sbjct: 513 ISTVSYSFVINGTPHGFLHPSRGLHQGDPLSPYLFLLCAEGLTELIAQKEREGFLKGVSI 572
Query: 127 SSTCPPISHLFF 92
P ISHLFF
Sbjct: 573 CRGAPAISHLFF 584
>gb|EMJ12193.1| hypothetical protein PRUPE_ppa021032mg [Prunus persica]
Length = 781
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/72 (44%), Positives = 43/72 (59%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
VH++ FS+++ V TPTRGI Q D LSPY F+I E +MI+ A N GL+F
Sbjct: 382 VHTVPFSLVLNGVQGNTFTPTRGIRQGDPLSPYLFLIVSEVLSLMIKKACEANHLQGLKF 441
Query: 127 SSTCPPISHLFF 92
+ P +SHL F
Sbjct: 442 GRSGPTLSHLLF 453
>gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon Ta11-1 [Arabidopsis
thaliana]
Length = 220
Score = 62.4 bits (150), Expect(2) = 3e-08
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V ++ ++VL+ P + P RG+ Q D LSP+ F++C EG ++ A+++ L +G+RF
Sbjct: 110 VTTVSYTVLVNGHPHGLVVPQRGLRQGDPLSPFLFVLCTEGLSHLLNRAEQQGLISGMRF 169
Query: 127 SSTCPPISHLFF 92
S P I HL F
Sbjct: 170 SPEGPSIHHLLF 181
Score = 20.8 bits (42), Expect(2) = 3e-08
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 87 DNSVLLYKADIQKCRS 40
D+S+ + KAD +CRS
Sbjct: 183 DDSLFVCKADDDQCRS 198
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
+ ++ +S +I P FL P+RG+ Q D LSPY F++C EG +I +R G+
Sbjct: 255 ISTVSYSFVINGTPHGFLHPSRGLRQGDPLSPYLFLLCAEGLTALIAQKEREGFLKGVSI 314
Query: 127 SSTCPPISHLFF 92
P ISHLFF
Sbjct: 315 CRGAPAISHLFF 326
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
Arabidopsis thaliana retrotransposon Ta11-1
gi|976278|gb|AAA75254.1| reverse transcriptase
[Arabidopsis thaliana]
Length = 1333
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
+ S+ +SVLI + P+RG+ Q D LSP+ F++C EG ++ A+R+ L +G+RF
Sbjct: 612 ISSVSYSVLINDKAFGNIVPSRGLRQGDPLSPFLFVLCSEGLTHLMNRAERQGLLSGIRF 671
Query: 127 SSTCPPISHLFF 92
S P I HL F
Sbjct: 672 SENGPAIHHLLF 683
>gb|EMJ03130.1| hypothetical protein PRUPE_ppa017480mg [Prunus persica]
Length = 268
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
+ ++ +SV + V S + P+RG+ Q D LSPY F+ICVEG ++ +A R +G+
Sbjct: 178 ISTVTYSVQVRGVASGMIVPSRGLRQGDPLSPYLFLICVEGLSALLSNALRIKRISGIFV 237
Query: 127 SSTCPPISHLFF 92
+ P ISHLFF
Sbjct: 238 AHGAPTISHLFF 249
>gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
Length = 916
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V ++ +S ++ P ++ P RG+ Q D LSPY F++C E +I A+RRNL G+
Sbjct: 493 VTTVSYSFMLNGNPVGYVIPQRGLRQGDPLSPYLFLLCAEALSSLILQAERRNLLHGVNL 552
Query: 127 SSTCPPISHLFF 92
P +SHLFF
Sbjct: 553 CRGAPSVSHLFF 564
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V ++ +S ++ P ++ P RG+ Q D LSPY F++C E +I A+RRNL G+
Sbjct: 973 VTTVSYSFMLNGNPVGYVIPQRGLRQGDPLSPYLFLLCAEALSSLILQAERRNLLHGVNL 1032
Query: 127 SSTCPPISHLFF 92
P +SHLFF
Sbjct: 1033 CRGAPSVSHLFF 1044
>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1094
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V S+ +SVLI P +TP RG+ Q D LSP+ F++C E ++ A++ +G++F
Sbjct: 339 VSSVSYSVLINGQPFGHITPHRGLRQGDPLSPFLFVLCTEALIHILNQAEKIGKISGIQF 398
Query: 127 SSTCPPISHLFF 92
+ T P ++HL F
Sbjct: 399 NGTGPSVNHLLF 410
>ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 888
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V S+++S+L+ P+ ++P+RGI Q D LSPY FI+C EG +I GL+
Sbjct: 178 VTSVQYSILLNGKPTEVISPSRGIRQGDPLSPYLFILCAEGLSSLISKVVADYTIKGLKL 237
Query: 127 SSTCPPISHLFF 92
S P + HLFF
Sbjct: 238 SPQAPILHHLFF 249
>ref|XP_004295858.1| PREDICTED: uncharacterized protein LOC101314838 [Fragaria vesca
subsp. vesca]
Length = 1524
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V ++ +S L+ PS + PTRG+ Q D++SPY F++C E +I A+ R+ G+R
Sbjct: 1100 VRTVSYSFLVNGEPSREVIPTRGLRQGDAISPYLFLVCAEVLSRIINEAEARDQIHGIRV 1159
Query: 127 SSTCPPISHLFF 92
+ P ++HLFF
Sbjct: 1160 CTGAPVVNHLFF 1171
>gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
Length = 1367
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/72 (38%), Positives = 41/72 (56%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V + +S ++ P ++ P RG+ Q D LSPY F++C E +I A+RRNL G+
Sbjct: 859 VTRVSYSFMLNGNPVGYVIPQRGLRQGDPLSPYLFLLCAEALSSLILQAERRNLLHGVNL 918
Query: 127 SSTCPPISHLFF 92
P +SHLFF
Sbjct: 919 CRGAPSVSHLFF 930
>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
Length = 1023
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/72 (36%), Positives = 42/72 (58%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
+ ++++ VL+ P + P RG+ Q D LSPY FI+C E IR A++ L G++
Sbjct: 460 ITTVQYRVLLNGQPRGLIVPKRGLRQGDPLSPYLFILCTEVLIANIRKAEQEKLITGIKV 519
Query: 127 SSTCPPISHLFF 92
++ P +SHL F
Sbjct: 520 ATASPSVSHLLF 531
>gb|EMJ13814.1| hypothetical protein PRUPE_ppa017091mg, partial [Prunus persica]
Length = 921
Score = 58.5 bits (140), Expect(2) = 2e-07
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = -1
Query: 307 VHSIRFSVLITRVPSLFLTPTRGIHQRDSLSPYFFIICVEGFFVMIRHAKRRNLFAGLRF 128
V +++FS+++ V TPTRGI Q D LSPY F+I E +MI+ A N L+F
Sbjct: 484 VRTVQFSLVLNGVQGNTFTPTRGIQQVDPLSPYLFLIVSEVLSLMIKKACEANYMQCLKF 543
Query: 127 SSTCPPISHLFF 92
+ P +SHL F
Sbjct: 544 GRSGPTLSHLLF 555
Score = 21.9 bits (45), Expect(2) = 2e-07
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 87 DNSVLLYKADIQKCRSN*NCPAGL 16
D+++ +A+ Q CR+ N PA +
Sbjct: 557 DDALFFIRANTQNCRNIPNTPASI 580