BLASTX nr result

ID: Catharanthus22_contig00046346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00046346
         (375 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238882.1| PREDICTED: zinc finger CCCH domain-containin...    72   1e-10
ref|XP_006344185.1| PREDICTED: zinc finger CCCH domain-containin...    68   1e-09
ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containin...    64   2e-08
emb|CBI26957.3| unnamed protein product [Vitis vinifera]               64   2e-08
gb|EPS61813.1| hypothetical protein M569_12980 [Genlisea aurea]        57   2e-06

>ref|XP_004238882.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Solanum lycopersicum]
          Length = 338

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 49/125 (39%), Positives = 65/125 (52%), Gaps = 15/125 (12%)
 Frame = +2

Query: 44  MEKEISTTGHGDTSGAADDM------------NYRSFFGSSLSPFLNYLNDGQDITTYQP 187
           M++EIST G G T    + +            +  S + S L P    L D    +T   
Sbjct: 1   MQREISTAGRGGTFSYDNGLPSPSVLSQPTAFDLTSLYSSMLFPPAGLLLDDSQPSTETT 60

Query: 188 LELKRSMMAPRLPP---SELLMDLHHHQDLIDRHNAVLGHLKETAKQAQALRQENINLKM 358
           +     ++ PR      S+LL+D H+ QDL+DRHN VL  L ET K+  ALRQENINLKM
Sbjct: 61  VT---PVLTPRFRQNHSSQLLIDQHYQQDLMDRHNRVLSQLLETEKKTLALRQENINLKM 117

Query: 359 VNADL 373
           VN +L
Sbjct: 118 VNFNL 122


>ref|XP_006344185.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Solanum tuberosum]
          Length = 338

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 47/125 (37%), Positives = 63/125 (50%), Gaps = 15/125 (12%)
 Frame = +2

Query: 44  MEKEISTTGHGDTSGAADDM------------NYRSFFGSSLSPFLNYLNDGQDITTYQP 187
           M++EIST G G      + +            +  S + S   P    L D    +T   
Sbjct: 1   MQREISTAGRGGAFSYDNGLPSPSVLSQPTAFDLTSLYSSMFFPPTGLLLDDSQPSTETT 60

Query: 188 LELKRSMMAPRLPP---SELLMDLHHHQDLIDRHNAVLGHLKETAKQAQALRQENINLKM 358
           +     ++ PR      S+LL+D H+ QDL+DRHN VL  L ET K+  ALRQENINLKM
Sbjct: 61  VT---PVLTPRFRQNHSSQLLIDQHYQQDLMDRHNRVLSQLLETEKKTLALRQENINLKM 117

Query: 359 VNADL 373
           VN +L
Sbjct: 118 VNFNL 122


>ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containing protein 15 [Vitis
           vinifera]
          Length = 396

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/73 (42%), Positives = 48/73 (65%)
 Frame = +2

Query: 155 NDGQDITTYQPLELKRSMMAPRLPPSELLMDLHHHQDLIDRHNAVLGHLKETAKQAQALR 334
           N+  + +T   ++  +++  P  PPS L+   + HQDLI+RHN  L HL+ETA++A+ LR
Sbjct: 106 NNSNNNSTPTSIDNVQALEVPYSPPSRLI---YEHQDLINRHNLCLNHLRETAQEAEVLR 162

Query: 335 QENINLKMVNADL 373
            EN NL++ N DL
Sbjct: 163 HENSNLRIANRDL 175


>emb|CBI26957.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/73 (42%), Positives = 48/73 (65%)
 Frame = +2

Query: 155 NDGQDITTYQPLELKRSMMAPRLPPSELLMDLHHHQDLIDRHNAVLGHLKETAKQAQALR 334
           N+  + +T   ++  +++  P  PPS L+   + HQDLI+RHN  L HL+ETA++A+ LR
Sbjct: 108 NNSNNNSTPTSIDNVQALEVPYSPPSRLI---YEHQDLINRHNLCLNHLRETAQEAEVLR 164

Query: 335 QENINLKMVNADL 373
            EN NL++ N DL
Sbjct: 165 HENSNLRIANRDL 177


>gb|EPS61813.1| hypothetical protein M569_12980 [Genlisea aurea]
          Length = 346

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
 Frame = +2

Query: 89  AADDMNYRSFFGSS--LSPFLNYLNDGQDIT-----TYQPLELKRSMMAPRLPPSELLMD 247
           A DD  Y S F  S  LS   N LNDG  ++     T   LE   S +  +L        
Sbjct: 26  AGDDCVYPSAFYPSMFLSMRSNLLNDGSPLSSSLAETDDELESLYSQIQQKL-------- 77

Query: 248 LHHHQDLIDRHNAVLGHLKETAKQAQALRQENINLKMVNADL 373
              HQDL+ R+ +VL  L+  AKQA  L QEN+NLKMVN DL
Sbjct: 78  ---HQDLMGRYQSVLSELRIVAKQAHDLHQENVNLKMVNLDL 116


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