BLASTX nr result
ID: Catharanthus22_contig00046333
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00046333
(327 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 117 2e-24
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 117 2e-24
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 116 3e-24
ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855... 115 8e-24
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 115 8e-24
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 115 8e-24
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 114 1e-23
ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula] ... 114 1e-23
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 113 3e-23
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 113 3e-23
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 113 3e-23
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 111 9e-23
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 111 1e-22
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 110 2e-22
ref|XP_004300707.1| PREDICTED: uncharacterized mitochondrial pro... 109 3e-22
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 108 6e-22
emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera] 108 7e-22
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 108 7e-22
emb|CAN69815.1| hypothetical protein VITISV_010421 [Vitis vinifera] 108 1e-21
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 108 1e-21
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 117 bits (292), Expect = 2e-24
Identities = 58/108 (53%), Positives = 78/108 (72%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYL +TR ELSYS++ L QFM Q+HW+ RVVR+ KS+P QGI LS +S L
Sbjct: 890 LVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTL 949
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+CD+++A+C +++ LT YF+ L ++PISWKTK+Q VSRS E
Sbjct: 950 QINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAE 997
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 117 bits (292), Expect = 2e-24
Identities = 58/108 (53%), Positives = 78/108 (72%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYL +TR ELSYS++ L QFM Q+HW+ RVVR+ KS+P QGI LS +S L
Sbjct: 1249 LVGRLIYLVVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTL 1308
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+CD+++A+C +++ LT YF+ L ++PISWKTK+Q VSRS E
Sbjct: 1309 QINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAE 1356
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 116 bits (291), Expect = 3e-24
Identities = 57/108 (52%), Positives = 78/108 (72%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYL +TR ELSYS++ L QFM Q+HW+ RVVR+ KS+P QGI LS +S L
Sbjct: 890 LVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTL 949
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+CD+++A+C +++ LT YF+ L ++PISWKTK+Q +SRS E
Sbjct: 950 QINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTISRSSAE 997
>ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855226 [Vitis vinifera]
Length = 1011
Score = 115 bits (287), Expect = 8e-24
Identities = 59/108 (54%), Positives = 73/108 (67%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYLTITR +L Y+++IL QFM Q H D +V+R+ K +P QGIFL + L
Sbjct: 786 LVGRLIYLTITRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQL 845
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
TAYCDA+WA C ++ T Y IF N+PISWKTK+Q VSRS E
Sbjct: 846 ELTAYCDADWARCKDTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAE 893
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 115 bits (287), Expect = 8e-24
Identities = 55/108 (50%), Positives = 75/108 (69%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYL +TR +L+YS++IL QFM + EHW+ RVVR+ K +P QGI L S L
Sbjct: 959 LVGRLIYLAVTRPDLAYSVHILSQFMXEPRIEHWEAALRVVRYLKGTPGQGILLRADSDL 1018
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+CD++WA+C +++ L+ + +FL SPISWKTK+Q VSRS E
Sbjct: 1019 SLQGWCDSDWAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAE 1066
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 115 bits (287), Expect = 8e-24
Identities = 59/108 (54%), Positives = 73/108 (67%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYLTITR +L Y+++IL QFM Q H D +V+R+ K +P QGIFL + L
Sbjct: 1259 LVGRLIYLTITRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQL 1318
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
TAYCDA+WA C ++ T Y IF N+PISWKTK+Q VSRS E
Sbjct: 1319 ELTAYCDADWARCKDTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAE 1366
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 114 bits (286), Expect = 1e-23
Identities = 55/108 (50%), Positives = 75/108 (69%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYL +TR +L+YS++IL QFM + EHW+ RVVR+ K +P QGI L S L
Sbjct: 880 LVGRLIYLAVTRPDLAYSVHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGILLRADSDL 939
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+CD++WA+C +++ L+ + +FL SPISWKTK+Q VSRS E
Sbjct: 940 SLQGWCDSDWAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAE 987
>ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula]
gi|355491466|gb|AES72669.1| Stomatin-like protein
[Medicago truncatula]
Length = 605
Score = 114 bits (285), Expect = 1e-23
Identities = 59/108 (54%), Positives = 76/108 (70%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYL TR ELSYS++IL QFM + ++HW RVVR+ K +P QGIFL +S +
Sbjct: 387 LVGRLIYLCFTRPELSYSVHILSQFMQQPREDHWTAALRVVRYLKGNPGQGIFLDSTSDM 446
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+CDA+WA+C I++ LT + + L NSPISWKTK+Q VSRS E
Sbjct: 447 KLHGWCDADWAACPITRRSLTGW-VILGNSPISWKTKKQQVVSRSSAE 493
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 113 bits (282), Expect = 3e-23
Identities = 54/108 (50%), Positives = 74/108 (68%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYL +TR +L+YS++IL QFM + EHW+ RVV + K +P QGI L S L
Sbjct: 1242 LVGRLIYLAVTRPDLAYSVHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLRADSDL 1301
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+CD++WA+C +++ L+ + +FL SPISWKTK+Q VSRS E
Sbjct: 1302 SLQGWCDSDWAACPVTKRSLSGWLVFLGQSPISWKTKKQHTVSRSSAE 1349
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 113 bits (282), Expect = 3e-23
Identities = 55/108 (50%), Positives = 75/108 (69%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGR IYLTITR +LSY+++IL QFM HW+ R+VR+ K SP QGIFL S L
Sbjct: 1277 LVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSL 1336
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+ AYCD+++ +C +++ L+ Y ++L +SPISWKTK+Q VS S E
Sbjct: 1337 IINAYCDSDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAE 1384
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 113 bits (282), Expect = 3e-23
Identities = 55/108 (50%), Positives = 75/108 (69%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGR IYLTITR +LSY+++IL QFM HW+ R+VR+ K SP QGIFL S L
Sbjct: 557 LVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSL 616
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+ AYCD+++ +C +++ L+ Y ++L +SPISWKTK+Q VS S E
Sbjct: 617 IINAYCDSDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAE 664
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 111 bits (278), Expect = 9e-23
Identities = 52/108 (48%), Positives = 74/108 (68%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYLT+TR ++ YS+ L QFM + HW+ RV+R+ K SP QG+FL + L
Sbjct: 1510 LVGRLIYLTVTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNL 1569
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+A+CD++W C +S+ ++ Y +FL +S ISWK+K+Q NVSRS E
Sbjct: 1570 TLSAFCDSDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAE 1617
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 111 bits (277), Expect = 1e-22
Identities = 60/108 (55%), Positives = 75/108 (69%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYL TR ELSY+I++L QFM+ +H + RVVR+ KSSP QGI L ++PL
Sbjct: 1229 LVGRLIYLGTTRPELSYAIHMLSQFMSDPKADHMEAALRVVRYLKSSPGQGILLRSNTPL 1288
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
V T +CD+ + SC I+Q LT +FI L SPISWKTK+ VSRS E
Sbjct: 1289 VLTGWCDSGFDSCPITQRSLTGWFIQLGGSPISWKTKKHDVVSRSSAE 1336
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 110 bits (276), Expect = 2e-22
Identities = 58/108 (53%), Positives = 74/108 (68%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGR+IYL TR ELSY I+IL QFM HW+ RVVR+ KSSP QGI L ++PL
Sbjct: 1267 LVGRIIYLATTRPELSYVIHILSQFMHNPKPAHWEAALRVVRYLKSSPGQGILLRANTPL 1326
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
V +A+CD+++ +C S LT +FI L SP+SWKT++Q VSRS E
Sbjct: 1327 VLSAWCDSDFGACPHSDRSLTGWFIQLGGSPLSWKTQKQNVVSRSSAE 1374
>ref|XP_004300707.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Fragaria vesca subsp. vesca]
Length = 316
Score = 109 bits (273), Expect = 3e-22
Identities = 52/108 (48%), Positives = 74/108 (68%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYLTITR +L Y+++IL QFM K Q H +V+R+ K +P QG+ LS + PL
Sbjct: 69 LVGRLIYLTITRPDLVYAVHILSQFMDKPRQPHLKAAHKVLRYIKQTPGQGVLLSSTGPL 128
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
A+CDA+WA C ++ F++ Y + + N+ +SWKTK+Q V+RS E
Sbjct: 129 ELRAFCDADWARCRDTRRFVSGYCVLIGNAHVSWKTKKQTTVARSSAE 176
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 108 bits (271), Expect = 6e-22
Identities = 53/108 (49%), Positives = 72/108 (66%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYL +TR L+YS++IL QFM + EHW+ RVV + K +P QGI L S L
Sbjct: 910 LVGRLIYLAVTRPNLAYSVHILSQFMQEPRIEHWEVALRVVHYLKGTPGQGILLRADSDL 969
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+CD++WA+C +++ L+ + +FL S ISWKTK+Q VSRS E
Sbjct: 970 SLQGWCDSDWAACPVTRRSLSGWLVFLGQSHISWKTKKQHTVSRSSAE 1017
>emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera]
Length = 514
Score = 108 bits (270), Expect = 7e-22
Identities = 56/108 (51%), Positives = 70/108 (64%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVG LIYLTITR +LSY +++L QFM + EHW+ RVVR+ K +P Q I L L
Sbjct: 313 LVGXLIYLTITRPKLSYCVHMLAQFMQQPKDEHWEATLRVVRYLKGNPGQSILLRSDCDL 372
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
AYCD++WASC +++ LT YFI L N ISWKTK+Q S S E
Sbjct: 373 KLYAYCDSDWASCPLTRRSLTGYFILLGNXSISWKTKKQHXTSXSSXE 420
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 108 bits (270), Expect = 7e-22
Identities = 52/108 (48%), Positives = 75/108 (69%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRLIYL +TRL+L++S++IL +FM + ++HW RVVR+ K+ P QG+FL S
Sbjct: 1114 LVGRLIYLAVTRLDLAFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSGDF 1173
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
T +CD++WA +S+ +T YF+ +SPISWKTK+Q VS+S E
Sbjct: 1174 QITGWCDSDWAGDPMSRRSVTGYFVQFGDSPISWKTKKQDTVSKSSAE 1221
>emb|CAN69815.1| hypothetical protein VITISV_010421 [Vitis vinifera]
Length = 584
Score = 108 bits (269), Expect = 1e-21
Identities = 52/108 (48%), Positives = 74/108 (68%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVG+LIYLTITRLE+SYS++IL QFM + + H D ++++ K +P QG++ S L
Sbjct: 365 LVGQLIYLTITRLEISYSVHILSQFMQEPRKPHLDVVHHLLQYLKGAPGQGLYFSTKGNL 424
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
+ +CDA+WA C I++ +T Y IFL + ISWKTK+Q +SRS E
Sbjct: 425 LLRGFCDADWARCSITRRSVTGYCIFLGEALISWKTKKQTTLSRSSAE 472
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 108 bits (269), Expect = 1e-21
Identities = 53/108 (49%), Positives = 70/108 (64%)
Frame = +3
Query: 3 LVGRLIYLTITRLELSYSINILDQFMTKSWQEHWDTPPRVVRHFKSSPKQGIFLSVSSPL 182
LVGRL+YL TR ELSYS+++L QFM + H+D RVVR+ K SP QGI L+ L
Sbjct: 1282 LVGRLLYLLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDL 1341
Query: 183 VKTAYCDANWASCHISQCFLTRYFIFLENSPISWKTKEQANVSRSLVE 326
YCD++W SC +++ ++ Y + L SPISWKTK+Q VS S E
Sbjct: 1342 TLEVYCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAE 1389