BLASTX nr result

ID: Catharanthus22_contig00046308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00046308
         (398 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313...    69   1e-11
gb|EMJ07680.1| hypothetical protein PRUPE_ppa018770mg [Prunus pe...    60   1e-08
ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A...    64   2e-08
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   4e-08
gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [...    57   7e-08
ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296...    58   3e-07
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A...    55   4e-07

>ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313223 [Fragaria vesca
           subsp. vesca]
          Length = 543

 Score = 68.9 bits (167), Expect(3) = 1e-11
 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = +1

Query: 70  TPPLPHNLAAKLSHKFDIPIQSDLEAYLGMPILHGRLSRHFYEFFISKVKKHLSGLKQNT 249
           +P     +A+ +S     P+ SDL  YLGMP++H R+++H Y+    KV+  LS  K   
Sbjct: 299 SPNTTKTMASSISATCGSPLTSDLGKYLGMPLIHSRVNKHTYDAIFYKVQSRLSSWKSKV 358

Query: 250 LS*AARM-IIQSSTSTIPYYAMQTS 321
           L+ A R+ +IQS TS IP YAMQT+
Sbjct: 359 LNMAGRLTLIQSVTSAIPNYAMQTT 383



 Score = 25.0 bits (53), Expect(3) = 1e-11
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 3   DNFCLVSG*RVNAHEPKLFTSKNT 74
           DNFC +SG  ++  +  +F S NT
Sbjct: 279 DNFCAISGQIISYEKSLIFCSPNT 302



 Score = 20.4 bits (41), Expect(3) = 1e-11
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 350 EKLNWKFFWGEHESER 397
           +KLN  F WG+ + ++
Sbjct: 394 DKLNRNFLWGDVDDKK 409


>gb|EMJ07680.1| hypothetical protein PRUPE_ppa018770mg [Prunus persica]
          Length = 790

 Score = 60.5 bits (145), Expect(2) = 1e-08
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = +1

Query: 124 PIQSDLEAYLGMPILHGRLSRHFYEFFISKVKKHLSGLKQNTLS*AAR-MIIQSSTSTIP 300
           P+ +DL  YLGMP+LH  + +H Y   + KV   L+  K   LS A R  +IQ+ T++IP
Sbjct: 614 PLTNDLGNYLGMPLLHSTIGKHTYSSLVDKVHNRLASWKSKLLSLAGRATLIQAVTASIP 673

Query: 301 YYAMQTSHM 327
            YAMQT+ +
Sbjct: 674 IYAMQTTKL 682



 Score = 24.3 bits (51), Expect(2) = 1e-08
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 344 DFEKLNWKFFWGEHESE 394
           D ++LN  FFWG  E +
Sbjct: 689 DLDRLNRNFFWGSSEKK 705


>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 407

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
 Frame = +1

Query: 124 PIQSDLEAYLGMPILHGRLSRHFYEFFISKVKKHLSGLKQNTLS*AARM-IIQSSTSTIP 300
           P+ +DL  YLGMP++H R+++H Y+    +V+  LS  K   LS A R+ +IQS +S IP
Sbjct: 5   PLTNDLGKYLGMPLIHSRVNKHTYDGIFDQVQSRLSSWKSKVLSMAGRLTLIQSVSSAIP 64

Query: 301 YYAMQTSHM-LAFDS*L*EAQLEILLGRTRIRK 396
            YAMQT+   ++    L +     L G T I+K
Sbjct: 65  NYAMQTAKFPVSLCENLDKLNRNFLWGDTEIKK 97


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 56.6 bits (135), Expect(2) = 4e-08
 Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
 Frame = +1

Query: 133 SDLEAYLGMPILHGRLSRHFYEFFISKVKKHLSGLKQNTLS*AAR-MIIQSSTSTIPYYA 309
           +D   YLG+P ++GR S+  Y++ + ++   L+G K  TLS A R  +IQS+ S+IPYY 
Sbjct: 751 ADFGKYLGVPTINGRSSKREYQYLVDRINGKLAGWKTKTLSIAGRATLIQSAFSSIPYYT 810

Query: 310 MQTSHM 327
           MQ++ +
Sbjct: 811 MQSTKL 816



 Score = 26.2 bits (56), Expect(2) = 4e-08
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 3   DNFCLVSG*RVNAHEPKLFTSKNT 74
           D FC  SG +VN  + K++ S NT
Sbjct: 710 DRFCEASGSKVNEDKSKIYFSANT 733


>gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [Prunus persica]
          Length = 387

 Score = 56.6 bits (135), Expect(3) = 7e-08
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +1

Query: 70  TPPLPHNLAAKLSHKFDIPIQSDLEAYLGMPILHGRLSRHFYEFFISKVKKHLSGLKQNT 249
           +P   + LA  LS     P+ ++L  YLGMPILH ++ +  Y   ++KV+  L+  K   
Sbjct: 99  SPNTGNVLAQDLSRICGSPLTANLGNYLGMPILHNKVCKDTYGGLVNKVQNCLTLWKSKH 158

Query: 250 LS*AAR-MIIQSSTSTIPYYAMQTSHM 327
           LS A R  +IQS TS+IP Y MQT+ +
Sbjct: 159 LSLAGRATLIQSVTSSIPVYTMQTAKL 185



 Score = 24.3 bits (51), Expect(3) = 7e-08
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 3   DNFCLVSG*RVNAHEPKLFTSKNT 74
           + FC VSG  VN  +  +F S NT
Sbjct: 79  EKFCSVSGQAVNFDKSAIFCSPNT 102



 Score = 20.4 bits (41), Expect(3) = 7e-08
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 350 EKLNWKFFWGEHES 391
           +++N  FFWG  E+
Sbjct: 194 DRINCNFFWGGTEN 207


>ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296313 [Fragaria vesca
           subsp. vesca]
          Length = 449

 Score = 57.8 bits (138), Expect(2) = 3e-07
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +1

Query: 70  TPPLPHNLAAKLSHKFDIPIQSDLEAYLGMPILHGRLSRHFYEFFISKVKKHLSGLKQNT 249
           +P    + A+ +S+    P+  DL  YLGMP+++ R+++  Y     KV+K L   K   
Sbjct: 293 SPNTSKSTASLISNVCGSPLTCDLGKYLGMPLIYDRVNKCTYAGLFDKVQKRLFSWKSKV 352

Query: 250 LS*AARM-IIQSSTSTIPYYAMQTS 321
           LS   R+ ++QS TS IP YAMQT+
Sbjct: 353 LSFVGRLTLVQSVTSAIPMYAMQTA 377



 Score = 22.3 bits (46), Expect(2) = 3e-07
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 3   DNFCLVSG*RVNAHEPKLFTSKNTA 77
           DNFC +S   V+  +  +F S NT+
Sbjct: 273 DNFCALSRQTVSFEKSLVFCSPNTS 297


>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 768

 Score = 55.5 bits (132), Expect(2) = 4e-07
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +1

Query: 79  LPHNLAAKLSHKFDIPIQSDLEAYLGMPILHGRLSRHFYEFFISKVKKHLSGLKQNTLS* 258
           +P  +A ++       +  DL  YLGMP+LH R+S+  Y+  + K  + L G   + LS 
Sbjct: 157 VPDAVATRIWRDLGYTVTKDLGKYLGMPLLHSRVSQQTYQGILDKTDQKLLGWAASQLSL 216

Query: 259 AARM-IIQSSTSTIPYYAMQTSHM 327
           A R+ + QS    +P YAMQT+++
Sbjct: 217 AGRITLTQSVLQAVPIYAMQTTNL 240



 Score = 23.9 bits (50), Expect(2) = 4e-07
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 6   NFCLVSG*RVNAHEPKLFTSKN 71
           +FCL SG +VN  +  ++ SKN
Sbjct: 135 DFCLSSGTKVNQSKTHVYFSKN 156


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