BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00046215
         (237 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352475.1| PREDICTED: pentatricopeptide repeat-containi...    97   3e-18
ref|XP_004250548.1| PREDICTED: pentatricopeptide repeat-containi...    96   6e-18
ref|XP_006372504.1| hypothetical protein POPTR_0017s02260g [Popu...    80   2e-13
ref|XP_002301657.1| predicted protein [Populus trichocarpa]            80   2e-13
emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]    80   4e-13
gb|EMJ16073.1| hypothetical protein PRUPE_ppa024881mg [Prunus pe...    79   5e-13
ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_004288384.1| PREDICTED: pentatricopeptide repeat-containi...    79   6e-13
ref|XP_003530188.2| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]         67   2e-09
ref|NP_188050.1| pentatricopeptide repeat-containing protein [Ar...    67   2e-09
ref|XP_006407092.1| hypothetical protein EUTSA_v10020249mg [Eutr...    67   3e-09
ref|XP_002885037.1| pentatricopeptide repeat-containing protein ...    65   9e-09
gb|ESW24932.1| hypothetical protein PHAVU_004G172900g [Phaseolus...    63   4e-08
ref|XP_001785140.1| predicted protein [Physcomitrella patens] gi...    62   6e-08
gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sati...    62   1e-07
ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group] g...    62   1e-07
gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japo...    62   1e-07
gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indi...    62   1e-07
gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat doma...    62   1e-07

>ref|XP_006352475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Solanum tuberosum]
          Length = 646

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 45/77 (58%), Positives = 55/77 (71%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+ VHAQIIK + E  QVVY+AL+ +YTECGCF D LKVFEE+PERN V WN        
Sbjct: 191 GRGVHAQIIKADKEADQVVYNALLGMYTECGCFRDVLKVFEEMPERNVVSWNSLIAGFVK 250

Query: 55  XXXLFEAFESFQRMQRD 5
              +FEAFE+F+RMQ +
Sbjct: 251 KRQVFEAFETFRRMQNE 267


>ref|XP_004250548.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Solanum lycopersicum]
          Length = 646

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 45/77 (58%), Positives = 55/77 (71%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+ VHAQIIK + E  QVVY+AL+ +YTECGCF D LKVFEE+PERN V WN        
Sbjct: 191 GRGVHAQIIKADKEADQVVYNALLGMYTECGCFWDVLKVFEEMPERNVVSWNSLIAGFVK 250

Query: 55  XXXLFEAFESFQRMQRD 5
              +FEAFE+F+RMQ +
Sbjct: 251 KRQVFEAFETFRRMQNE 267


>ref|XP_006372504.1| hypothetical protein POPTR_0017s02260g [Populus trichocarpa]
           gi|550319130|gb|ERP50301.1| hypothetical protein
           POPTR_0017s02260g [Populus trichocarpa]
          Length = 648

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 37/78 (47%), Positives = 50/78 (64%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+ VHAQ++K    P QVV + L+RLYT+C CF + LKVF+++PERN   WN        
Sbjct: 193 GRGVHAQVVKSSEGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVK 252

Query: 55  XXXLFEAFESFQRMQRDG 2
              L EA + F+RMQR+G
Sbjct: 253 EDKLGEALDVFRRMQREG 270


>ref|XP_002301657.1| predicted protein [Populus trichocarpa]
          Length = 504

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 37/78 (47%), Positives = 50/78 (64%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+ VHAQ++K    P QVV + L+RLYT+C CF + LKVF+++PERN   WN        
Sbjct: 49  GRGVHAQVVKSSEGPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVK 108

Query: 55  XXXLFEAFESFQRMQRDG 2
              L EA + F+RMQR+G
Sbjct: 109 EDKLGEALDVFRRMQREG 126


>emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
          Length = 773

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 37/78 (47%), Positives = 52/78 (66%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+AVHAQ++K   +P QVV +AL+RLY+E GCFE+ L++F+ +P RN V WN        
Sbjct: 196 GRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVK 255

Query: 55  XXXLFEAFESFQRMQRDG 2
              +FEA E+F+ MQ  G
Sbjct: 256 KEGVFEAIEAFRIMQGKG 273


>gb|EMJ16073.1| hypothetical protein PRUPE_ppa024881mg [Prunus persica]
          Length = 621

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/78 (48%), Positives = 51/78 (65%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+AVHAQI+K   EP QVV +AL+RLY E GC  +  +VF+ +PERN V WN        
Sbjct: 176 GRAVHAQIVKSIEEPDQVVNNALLRLYAENGCSIEVFRVFDTMPERNVVSWNSLIASFAR 235

Query: 55  XXXLFEAFESFQRMQRDG 2
              +FE+ +SF+RMQ +G
Sbjct: 236 RDQVFESLDSFRRMQEEG 253


>ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera] gi|296088358|emb|CBI36803.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/78 (47%), Positives = 52/78 (66%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+AVHAQ++K   +P QVV +AL+RLY+E GCF++ L+VF+ +P RN V WN        
Sbjct: 197 GRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVK 256

Query: 55  XXXLFEAFESFQRMQRDG 2
              +FEA E+F+ MQ  G
Sbjct: 257 KDGVFEAIEAFRIMQGKG 274


>ref|XP_004288384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Fragaria vesca subsp. vesca]
          Length = 642

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/78 (47%), Positives = 51/78 (65%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+AVHAQI+K   +P QVV +AL+RLY++ GCF D L VF+ +P+RN V WN        
Sbjct: 187 GRAVHAQIVKSNEKPDQVVSNALLRLYSDQGCFADALMVFDTMPQRNVVSWNSLIASFVR 246

Query: 55  XXXLFEAFESFQRMQRDG 2
              + E+ E F+RMQ +G
Sbjct: 247 RDRVVESLECFRRMQGEG 264


>ref|XP_003530188.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Glycine max]
          Length = 706

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = -3

Query: 235 GKAVHAQIIKPE-SEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXX 59
           G+A+HAQI+K +  E  QVV +AL+ LY E GCF++ LKVFEE+P+RN V WN       
Sbjct: 250 GRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFA 309

Query: 58  XXXXLFEAFESFQRMQRDG 2
               +FE   +F+ MQR+G
Sbjct: 310 GQGRVFETLSAFRVMQREG 328


>dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
          Length = 717

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+ +HAQI+K + +  QVVY+ L++LY E G F+D  KVF+ + ERN V WN        
Sbjct: 262 GRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSK 321

Query: 55  XXXLFEAFESFQRMQRD 5
              + E F  F++MQ +
Sbjct: 322 KVRVHEMFNLFRKMQEE 338


>ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g14330 gi|332641981|gb|AEE75502.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+ +HAQI+K + +  QVVY+ L++LY E G F+D  KVF+ + ERN V WN        
Sbjct: 255 GRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSK 314

Query: 55  XXXLFEAFESFQRMQRD 5
              + E F  F++MQ +
Sbjct: 315 KVRVHEMFNLFRKMQEE 331


>ref|XP_006407092.1| hypothetical protein EUTSA_v10020249mg [Eutrema salsugineum]
           gi|557108238|gb|ESQ48545.1| hypothetical protein
           EUTSA_v10020249mg [Eutrema salsugineum]
          Length = 654

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+ +HAQI+K   +  QVV +AL++LY E G FED  K+F+ +P+RN V WN        
Sbjct: 199 GRGIHAQIVKRREKVDQVVNNALLKLYMERGSFEDARKLFDGMPQRNIVTWNSLISVLSK 258

Query: 55  XXXLFEAFESFQRMQRD 5
              + E F  F++MQ++
Sbjct: 259 KVRVHEMFNLFRKMQQE 275


>ref|XP_002885037.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330877|gb|EFH61296.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 690

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 30/77 (38%), Positives = 45/77 (58%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           G+ +H QI+K + +  QVVY+ L++LY E G F+D  KVF+ + ERN V WN        
Sbjct: 248 GRGIHGQIVKRKEKVDQVVYNVLLKLYMERGSFDDARKVFDGMSERNIVTWNSLISILSK 307

Query: 55  XXXLFEAFESFQRMQRD 5
              + E F  F++MQ +
Sbjct: 308 KVRVHEMFNLFRKMQEE 324


>gb|ESW24932.1| hypothetical protein PHAVU_004G172900g [Phaseolus vulgaris]
          Length = 648

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -3

Query: 235 GKAVHAQIIKPE-SEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXX 59
           G+A+HAQI+K +  E  QVV +AL+  Y E GCF++ LK+FE +P+RN V WN       
Sbjct: 193 GRAIHAQIVKHDVGEADQVVNNALLGFYVEIGCFDEVLKMFEVMPQRNVVSWNSLIAGLA 252

Query: 58  XXXXLFEAFESFQRMQ 11
               + E   +F+ MQ
Sbjct: 253 AQDRVSETLGAFRVMQ 268


>ref|XP_001785140.1| predicted protein [Physcomitrella patens]
           gi|162663262|gb|EDQ50036.1| predicted protein
           [Physcomitrella patens]
          Length = 922

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/77 (37%), Positives = 45/77 (58%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           GK +H+QI++   E    V +AL+ +Y +CG  E+  KVF ++PE+N V WN        
Sbjct: 372 GKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCR 431

Query: 55  XXXLFEAFESFQRMQRD 5
                EAF+ F++M+RD
Sbjct: 432 HGSEKEAFQVFKQMRRD 448


>gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
           gi|31433484|gb|AAP54989.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 905

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/77 (37%), Positives = 42/77 (54%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           GK +H QIIK E    + + S L+ +Y +CG   D L VFE++ +R+FV WN        
Sbjct: 614 GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 673

Query: 55  XXXLFEAFESFQRMQRD 5
                EA   F+RMQ++
Sbjct: 674 HGLGVEALRMFERMQKE 690


>ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
           gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa
           Japonica Group]
          Length = 863

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/77 (37%), Positives = 42/77 (54%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           GK +H QIIK E    + + S L+ +Y +CG   D L VFE++ +R+FV WN        
Sbjct: 572 GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 631

Query: 55  XXXLFEAFESFQRMQRD 5
                EA   F+RMQ++
Sbjct: 632 HGLGVEALRMFERMQKE 648


>gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/77 (37%), Positives = 42/77 (54%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           GK +H QIIK E    + + S L+ +Y +CG   D L VFE++ +R+FV WN        
Sbjct: 572 GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 631

Query: 55  XXXLFEAFESFQRMQRD 5
                EA   F+RMQ++
Sbjct: 632 HGLGVEALRMFERMQKE 648


>gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
          Length = 799

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/77 (37%), Positives = 42/77 (54%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           GK +H QIIK E    + + S L+ +Y +CG   D L VFE++ +R+FV WN        
Sbjct: 508 GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 567

Query: 55  XXXLFEAFESFQRMQRD 5
                EA   F+RMQ++
Sbjct: 568 HGLGVEALRMFERMQKE 584


>gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat domain containing protein [Oryza
           sativa Japonica Group]
          Length = 391

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/77 (37%), Positives = 42/77 (54%)
 Frame = -3

Query: 235 GKAVHAQIIKPESEPGQVVYSALMRLYTECGCFEDELKVFEEIPERNFVPWNXXXXXXXX 56
           GK +H QIIK E    + + S L+ +Y +CG   D L VFE++ +R+FV WN        
Sbjct: 100 GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 159

Query: 55  XXXLFEAFESFQRMQRD 5
                EA   F+RMQ++
Sbjct: 160 HGLGVEALRMFERMQKE 176