BLASTX nr result
ID: Catharanthus22_contig00046151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00046151
(357 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [... 129 4e-28
gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii] 124 1e-26
gb|ADD30887.1| putative RF2 protein [Nerium oleander] gi|3408071... 124 1e-26
gb|ABQ14908.1| Ycf2 [Pterostemon rotundifolius] 124 1e-26
gb|AGW05017.1| hypothetical chloroplast protein [Vincetoxicum ro... 123 2e-26
gb|AGW04786.1| hypothetical chloroplast protein [Orthosia scoparia] 123 2e-26
gb|AGW04483.1| hypothetical chloroplast protein [Astephanus trif... 123 2e-26
gb|AGW04406.1| hypothetical chloroplast protein [Araujia sericif... 123 2e-26
gb|AGJ51293.1| Ycf2 (chloroplast) [Solanum carolinense] 123 2e-26
ref|YP_398908.1| Ycf2 [Nicotiana tomentosiformis] gi|81301647|re... 123 2e-26
ref|NP_783294.1| Ycf2 [Atropa belladonna] gi|47117596|sp|Q8S8U1.... 123 2e-26
ref|NP_783274.1| Ycf2 [Atropa belladonna] gi|47117597|sp|Q8S8V2.... 123 2e-26
ref|YP_004891651.1| ycf2 gene product (chloroplast) [Nicotiana u... 123 2e-26
gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum] 123 2e-26
gb|ADZ36363.1| hypothetical protein RF2 [Symplocos paniculata] 123 2e-26
gb|ADD30891.1| putative RF2 protein [Cornus florida] gi|34080708... 123 2e-26
gb|ADD30890.1| putative RF2 protein [Berberidopsis corallina] gi... 123 2e-26
gb|ADD30884.1| putative RF2 protein [Lonicera japonica] gi|34080... 123 2e-26
gb|ADD30883.1| putative RF2 protein [Ilex cornuta] gi|340806994|... 123 2e-26
gb|ADD30882.1| putative RF2 protein [Ehretia acuminata] gi|34080... 123 2e-26
>ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|511348399|ref|YP_008081328.1| hypothetical
chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|474452120|gb|AGI51188.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
gi|474452139|gb|AGI51207.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
Length = 2273
Score = 129 bits (324), Expect = 4e-28
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = -1
Query: 243 SSNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCD 64
SSNPTERSTRDPKL +KE+DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCD
Sbjct: 502 SSNPTERSTRDPKLLKKEQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCD 561
Query: 63 MVPKD 49
MVPKD
Sbjct: 562 MVPKD 566
>gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii]
Length = 2279
Score = 124 bits (312), Expect = 1e-26
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRDPKL +KE+DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSD GCDM
Sbjct: 504 SNPTERSTRDPKLLKKEQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDSGCDM 563
Query: 60 VPKD 49
VPKD
Sbjct: 564 VPKD 567
>gb|ADD30887.1| putative RF2 protein [Nerium oleander] gi|340807172|gb|AEK71765.1|
hypothetical chloroplast RF2 [Nerium oleander]
Length = 2278
Score = 124 bits (312), Expect = 1e-26
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRDPKL +KE+DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSD GCDM
Sbjct: 506 SNPTERSTRDPKLLKKEQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDSGCDM 565
Query: 60 VPKD 49
VPKD
Sbjct: 566 VPKD 569
>gb|ABQ14908.1| Ycf2 [Pterostemon rotundifolius]
Length = 2305
Score = 124 bits (312), Expect = 1e-26
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +KE+DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 506 SNPTERSTRDQKLLKKEQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 565
Query: 60 VPKD 49
VPKD
Sbjct: 566 VPKD 569
>gb|AGW05017.1| hypothetical chloroplast protein [Vincetoxicum rossicum]
Length = 2067
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRDPKL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSD GCDM
Sbjct: 319 SNPTERSTRDPKLLKKDQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDSGCDM 378
Query: 60 VPKD 49
VPKD
Sbjct: 379 VPKD 382
>gb|AGW04786.1| hypothetical chloroplast protein [Orthosia scoparia]
Length = 2059
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRDPKL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSD GCDM
Sbjct: 319 SNPTERSTRDPKLLKKDQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDSGCDM 378
Query: 60 VPKD 49
VPKD
Sbjct: 379 VPKD 382
>gb|AGW04483.1| hypothetical chloroplast protein [Astephanus triflorus]
Length = 2130
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRDPKL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSD GCDM
Sbjct: 319 SNPTERSTRDPKLLKKDQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDSGCDM 378
Query: 60 VPKD 49
VPKD
Sbjct: 379 VPKD 382
>gb|AGW04406.1| hypothetical chloroplast protein [Araujia sericifera]
Length = 722
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRDPKL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSD GCDM
Sbjct: 321 SNPTERSTRDPKLLKKDQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDSGCDM 380
Query: 60 VPKD 49
VPKD
Sbjct: 381 VPKD 384
>gb|AGJ51293.1| Ycf2 (chloroplast) [Solanum carolinense]
Length = 2076
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 506 SNPTERSTRDQKLLKKQQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 565
Query: 60 VPKD 49
VPKD
Sbjct: 566 VPKD 569
>ref|YP_398908.1| Ycf2 [Nicotiana tomentosiformis] gi|81301647|ref|YP_398942.1| Ycf2
[Nicotiana tomentosiformis]
gi|109896303|sp|Q33BV3.1|YCF2_NICTO RecName:
Full=Protein Ycf2 gi|80750971|dbj|BAE48047.1| Ycf2
protein [Nicotiana tomentosiformis]
gi|80751006|dbj|BAE48082.1| Ycf2 protein [Nicotiana
tomentosiformis]
Length = 2280
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 506 SNPTERSTRDQKLLKKQQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 565
Query: 60 VPKD 49
VPKD
Sbjct: 566 VPKD 569
>ref|NP_783294.1| Ycf2 [Atropa belladonna] gi|47117596|sp|Q8S8U1.1|YCF2B_ATRBE
RecName: Full=Protein Ycf2 B gi|20068395|emb|CAC88108.1|
ycf2 protein [Atropa belladonna]
Length = 2291
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 506 SNPTERSTRDQKLLKKQQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 565
Query: 60 VPKD 49
VPKD
Sbjct: 566 VPKD 569
>ref|NP_783274.1| Ycf2 [Atropa belladonna] gi|47117597|sp|Q8S8V2.1|YCF2A_ATRBE
RecName: Full=Protein Ycf2 A gi|20068374|emb|CAC88087.1|
ycf2 protein [Atropa belladonna]
Length = 2291
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 506 SNPTERSTRDQKLLKKQQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 565
Query: 60 VPKD 49
VPKD
Sbjct: 566 VPKD 569
>ref|YP_004891651.1| ycf2 gene product (chloroplast) [Nicotiana undulata]
gi|351653958|ref|YP_004891685.1| ycf2 gene product
(chloroplast) [Nicotiana undulata]
gi|347453954|gb|AEO95612.1| hypothetical chloroplast
RF21 (chloroplast) [Nicotiana undulata]
gi|347453984|gb|AEO95642.1| hypothetical chloroplast
RF21 (chloroplast) [Nicotiana undulata]
gi|347454065|gb|AEO95722.1| hypothetical chloroplast
RF21 [synthetic construct] gi|347454093|gb|AEO95750.1|
hypothetical chloroplast RF21 [synthetic construct]
Length = 2280
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 506 SNPTERSTRDQKLLKKQQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 565
Query: 60 VPKD 49
VPKD
Sbjct: 566 VPKD 569
>gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum]
Length = 2316
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +KE+D+SFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 508 SNPTERSTRDQKLLKKEQDVSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 567
Query: 60 VPKD 49
VPKD
Sbjct: 568 VPKD 571
>gb|ADZ36363.1| hypothetical protein RF2 [Symplocos paniculata]
Length = 2295
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 506 SNPTERSTRDQKLLKKQQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 565
Query: 60 VPKD 49
VPKD
Sbjct: 566 VPKD 569
>gb|ADD30891.1| putative RF2 protein [Cornus florida] gi|340807086|gb|AEK71690.1|
hypothetical chloroplast RF2 [Cornus florida]
Length = 2295
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 506 SNPTERSTRDQKLLKKQQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 565
Query: 60 VPKD 49
VPKD
Sbjct: 566 VPKD 569
>gb|ADD30890.1| putative RF2 protein [Berberidopsis corallina]
gi|340807100|gb|AEK71702.1| hypothetical chloroplast RF2
[Berberidopsis corallina]
Length = 2298
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +KE+D+SFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 506 SNPTERSTRDQKLLKKEQDVSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 565
Query: 60 VPKD 49
VPKD
Sbjct: 566 VPKD 569
>gb|ADD30884.1| putative RF2 protein [Lonicera japonica]
gi|340807015|gb|AEK71633.1| hypothetical chloroplast RF2
[Lonicera japonica]
Length = 2283
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 307 SNPTERSTRDQKLLKKQEDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 366
Query: 60 VPKD 49
VPKD
Sbjct: 367 VPKD 370
>gb|ADD30883.1| putative RF2 protein [Ilex cornuta] gi|340806994|gb|AEK71615.1|
hypothetical chloroplast RF2 [Ilex cornuta]
Length = 2297
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 508 SNPTERSTRDQKLLKKQQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 567
Query: 60 VPKD 49
VPKD
Sbjct: 568 VPKD 571
>gb|ADD30882.1| putative RF2 protein [Ehretia acuminata]
gi|340806978|gb|AEK71601.1| hypothetical chloroplast RF2
[Ehretia acuminata]
Length = 2284
Score = 123 bits (309), Expect = 2e-26
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -1
Query: 240 SNPTERSTRDPKLFEKEKDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 61
SNPTERSTRD KL +K++DLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM
Sbjct: 506 SNPTERSTRDQKLLKKQQDLSFVPSRRSENKEMVNIFKIITYLQNTVSIHPISSDPGCDM 565
Query: 60 VPKD 49
VPKD
Sbjct: 566 VPKD 569