BLASTX nr result

ID: Catharanthus22_contig00046074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00046074
         (284 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS69206.1| hypothetical protein M569_05560, partial [Genlise...    61   1e-07
gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]        57   2e-06
ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein A...    57   3e-06
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304...    56   4e-06
ref|XP_004301837.1| PREDICTED: putative ribonuclease H protein A...    55   1e-05

>gb|EPS69206.1| hypothetical protein M569_05560, partial [Genlisea aurea]
          Length = 474

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/88 (35%), Positives = 46/88 (52%)
 Frame = +2

Query: 2   VWQDN*LPQSYMFKPLPSNQYLADNLRVADLVSWALCRWNIQVLKCFFCSSDIQIIHGIP 181
           VW+D  +P ++ FKP         N+RV +L+      WN+  L+  F SSD+  I  IP
Sbjct: 50  VWKDPWIPDTFAFKPSSPAPLGMANMRVKELIISNQAEWNLSRLRQTFSSSDVHCILAIP 109

Query: 182 LCQVSVSNIRCWHFTDSGEFTVAFAYRL 265
           L +    +   WHFT  GE++V   Y+L
Sbjct: 110 LAKNPYPDRLIWHFTRQGEYSVKTGYQL 137


>gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]
          Length = 1469

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/86 (34%), Positives = 44/86 (51%)
 Frame = +2

Query: 2    VWQDN*LPQSYMFKPLPSNQYLADNLRVADLVSWALCRWNIQVLKCFFCSSDIQIIHGIP 181
            VW    LP++  FKP+  N  L+ +LRV+DL+S   C WN   ++  F  +D   I  IP
Sbjct: 1309 VWNSPWLPRAGSFKPMFRNPALSPHLRVSDLISPDTCDWNRSYIQQVFLPADAATILSIP 1368

Query: 182  LCQVSVSNIRCWHFTDSGEFTVAFAY 259
            L      +   WH++  G +TV   Y
Sbjct: 1369 LGSSGHHDRMIWHYSREGTYTVKSGY 1394


>ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 735

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/86 (31%), Positives = 43/86 (50%)
 Frame = +2

Query: 2   VWQDN*LPQSYMFKPLPSNQYLADNLRVADLVSWALCRWNIQVLKCFFCSSDIQIIHGIP 181
           +W D  +P  Y FKP       ++++RV DL+   +  WN++V++  F   +I +I  IP
Sbjct: 155 IWNDPWVPLPYSFKPFSDPMQGSEDMRVCDLIDGDIGEWNVEVIEDLFNPMEIDLILKIP 214

Query: 182 LCQVSVSNIRCWHFTDSGEFTVAFAY 259
           L      +   WHF   G +TV   Y
Sbjct: 215 LSLYGGEDRLVWHFDKKGCYTVKSGY 240


>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
            subsp. vesca]
          Length = 1687

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/91 (30%), Positives = 53/91 (58%)
 Frame = +2

Query: 2    VWQDN*LPQSYMFKPLPSNQYLADNLRVADLVSWALCRWNIQVLKCFFCSSDIQIIHGIP 181
            +W+D  LP  + F+ + + +++  N RV+ L++ +   W++  ++  F   D   I  IP
Sbjct: 938  IWEDKWLPSPWSFRVV-TPRFMDSNTRVSTLMT-SPSMWDVIFIQTHFLPVDADKILSIP 995

Query: 182  LCQVSVSNIRCWHFTDSGEFTVAFAYRLAMK 274
            +C+ S S++  WH+T+ G +TV   Y LAM+
Sbjct: 996  VCERSGSDVAIWHYTNDGYYTVKSGYWLAME 1026


>ref|XP_004301837.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 420

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/89 (32%), Positives = 44/89 (49%)
 Frame = +2

Query: 2   VWQDN*LPQSYMFKPLPSNQYLADNLRVADLVSWALCRWNIQVLKCFFCSSDIQIIHGIP 181
           VW D  LP+ Y FKP        ++L V DL+      W + +L+  F + ++++I  IP
Sbjct: 40  VWNDPWLPRPYTFKPYSGVMEGLEDLMVGDLIDPDTSTWMVDLLEELFYADEVEMIRKIP 99

Query: 182 LCQVSVSNIRCWHFTDSGEFTVAFAYRLA 268
           L   S  +   WHF   G ++V   Y LA
Sbjct: 100 LSIRSPDDRLIWHFDKHGLYSVRSGYHLA 128


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