BLASTX nr result

ID: Catharanthus22_contig00046058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00046058
         (287 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]               59   7e-07
ref|XP_002437407.1| hypothetical protein SORBIDRAFT_10g026363 [S...    55   7e-06

>gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
          Length = 2749

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
 Frame = -3

Query: 225  KIQAITNWPIPQFARGLQGFLSLVGYYIKLIKDYG---TSFPRVS*RKILFNGLQSKPCF 55
            K++A+++WP P  ARGL+GFL L GYY K I+D+G       R+  R        ++  F
Sbjct: 1150 KVEAVSSWPAPHSARGLRGFLGLAGYYRKFIRDFGVIAAPLTRLLRRDAFTWDDDTQAAF 1209

Query: 54   L*IKAPLSTALIQQLPNF 1
              +K  L+T  + Q+PNF
Sbjct: 1210 QQLKTALTTGPVLQMPNF 1227


>ref|XP_002437407.1| hypothetical protein SORBIDRAFT_10g026363 [Sorghum bicolor]
            gi|241915630|gb|EER88774.1| hypothetical protein
            SORBIDRAFT_10g026363 [Sorghum bicolor]
          Length = 1609

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
 Frame = -3

Query: 225  KIQAITNWPIPQFARGLQGFLSLVGYYIKLIKDYG------TSFPRVS*RKILFNGLQSK 64
            K+ A+ +WP P+ ARGL+GFL L GYY + IKDYG      TS  R   +       +++
Sbjct: 909  KVAAVQSWPQPRSARGLRGFLGLAGYYRRFIKDYGAIAAPLTSLLR---KNAFLWTAEAE 965

Query: 63   PCFL*IKAPLSTALIQQLPNF 1
              F  +K  LS A +  LP+F
Sbjct: 966  DAFSALKQALSAAPVLHLPDF 986


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