BLASTX nr result
ID: Catharanthus22_contig00046018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00046018
(275 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi... 71 2e-10
ref|XP_006493413.1| PREDICTED: F-box protein At5g49610-like isof... 69 6e-10
ref|XP_006441410.1| hypothetical protein CICLE_v10020526mg [Citr... 69 8e-10
gb|EXB26154.1| F-box protein [Morus notabilis] 65 9e-09
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm... 64 2e-08
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc... 62 6e-08
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc... 62 8e-08
ref|XP_004235486.1| PREDICTED: F-box protein At5g49610-like [Sol... 60 2e-07
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|5... 59 5e-07
ref|XP_006374273.1| hypothetical protein POPTR_0015s05590g [Popu... 59 5e-07
>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
gi|296088512|emb|CBI37503.3| unnamed protein product
[Vitis vinifera]
Length = 378
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/72 (45%), Positives = 53/72 (73%)
Frame = +1
Query: 4 KLARRSTIDMVPQCIDLLAFKDGVLLTRVCSDVYSFNFESRKMKKICKLVDLGRNSFYAP 183
++A+R +ID +P +D LAFKDG+LL RV + + + +RKM+++C L LGRNS + P
Sbjct: 305 RVAQRISIDSIPW-MDPLAFKDGLLLMRVSTKIILYCIGTRKMEELCNLSKLGRNSIFGP 363
Query: 184 IVLPYAMSLVPL 219
+V+PY+++L PL
Sbjct: 364 LVIPYSLNLAPL 375
>ref|XP_006493413.1| PREDICTED: F-box protein At5g49610-like isoform X1 [Citrus
sinensis] gi|568881067|ref|XP_006493414.1| PREDICTED:
F-box protein At5g49610-like isoform X2 [Citrus
sinensis]
Length = 390
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/72 (47%), Positives = 50/72 (69%)
Frame = +1
Query: 4 KLARRSTIDMVPQCIDLLAFKDGVLLTRVCSDVYSFNFESRKMKKICKLVDLGRNSFYAP 183
++ RR TID P +D LAF+DG+LL RVC+ ++ ++ E+ KM ++C + LG S Y P
Sbjct: 319 RVRRRPTIDSNPW-MDPLAFRDGILLIRVCAKIFLYHVETNKMNEVCYVSGLGTYSSYLP 377
Query: 184 IVLPYAMSLVPL 219
VLPY++SLV L
Sbjct: 378 TVLPYSLSLVRL 389
>ref|XP_006441410.1| hypothetical protein CICLE_v10020526mg [Citrus clementina]
gi|557543672|gb|ESR54650.1| hypothetical protein
CICLE_v10020526mg [Citrus clementina]
Length = 390
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/72 (47%), Positives = 50/72 (69%)
Frame = +1
Query: 4 KLARRSTIDMVPQCIDLLAFKDGVLLTRVCSDVYSFNFESRKMKKICKLVDLGRNSFYAP 183
++ RR TID P +D LAF+DG+LL RVC+ ++ ++ E+ KM ++C + LG S Y P
Sbjct: 319 RVRRRPTIDSNPW-MDPLAFRDGILLIRVCAKIFLYHVETSKMNEVCYVSGLGTYSSYLP 377
Query: 184 IVLPYAMSLVPL 219
VLPY++SLV L
Sbjct: 378 TVLPYSLSLVRL 389
>gb|EXB26154.1| F-box protein [Morus notabilis]
Length = 396
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +1
Query: 19 STIDMVPQCIDLLAFKDGVLLTRVCSDVYSFNFESRKMKKICKLVDLGRNSFYAPIVLPY 198
S D ++ LAFKDG+LL V + +Y ++FE+ KM+ +C+ LG +S + P VLPY
Sbjct: 315 SVYDTETPWVNPLAFKDGLLLMIVSAKIYLYHFETSKMQVVCEAFKLGSSSIFFPTVLPY 374
Query: 199 AMSLVPLV 222
+MSLVPL+
Sbjct: 375 SMSLVPLL 382
>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
gi|223535221|gb|EEF36899.1| conserved hypothetical
protein [Ricinus communis]
Length = 375
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +1
Query: 4 KLARRSTIDMVPQCIDLLAFKDGVLLTRVCSDVYSFNFESRKMKKICKLVDLGRNSFYAP 183
+L + D V +D LAFKDG+L+ RV + VY ++ KM+++C G +S Y P
Sbjct: 300 ELVKLQMTDDVSPWVDSLAFKDGILVLRVSTIVYLYDIIRSKMQEVCDNSKFGTSSMYCP 359
Query: 184 IVLPYAMSLVPLV 222
VLPY+M+LVPL+
Sbjct: 360 TVLPYSMTLVPLL 372
>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
Length = 398
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/72 (41%), Positives = 47/72 (65%)
Frame = +1
Query: 4 KLARRSTIDMVPQCIDLLAFKDGVLLTRVCSDVYSFNFESRKMKKICKLVDLGRNSFYAP 183
K+ +R + + +D AFKD VLL RV S VY ++ E+ K+ ++C + LG N F +P
Sbjct: 310 KIMQRRRLPGMEPYMDPWAFKDEVLLMRVFSTVYFYHIETGKVVEVCNVASLGPNPFVSP 369
Query: 184 IVLPYAMSLVPL 219
V+PY++SL+PL
Sbjct: 370 PVIPYSLSLIPL 381
>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
Length = 399
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/72 (41%), Positives = 47/72 (65%)
Frame = +1
Query: 4 KLARRSTIDMVPQCIDLLAFKDGVLLTRVCSDVYSFNFESRKMKKICKLVDLGRNSFYAP 183
K+ +R + + +D AFKD VLL RV S VY ++ E+ K+ ++C + LG N F +P
Sbjct: 310 KIMQRKRLPGMEPYMDPWAFKDEVLLMRVFSTVYFYHTETGKVVEVCNVASLGPNPFVSP 369
Query: 184 IVLPYAMSLVPL 219
V+PY++SL+PL
Sbjct: 370 PVIPYSLSLIPL 381
>ref|XP_004235486.1| PREDICTED: F-box protein At5g49610-like [Solanum lycopersicum]
Length = 379
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +1
Query: 46 IDLLAFKDGVLLTRVCSDVYSFNFESRKMKKICKLVDLGRNSFYAPIVLPYAMSLVPL 219
I LAFK+ +LL RV +D+Y + F++ KM+ +C L L F++ V+PY MSLVPL
Sbjct: 321 IGTLAFKNNILLMRVAADIYLYQFDTMKMRHLCSLSALAPKPFFSATVVPYTMSLVPL 378
>ref|XP_002329727.1| predicted protein [Populus trichocarpa]
gi|566206021|ref|XP_006374274.1| hypothetical protein
POPTR_0015s05590g [Populus trichocarpa]
gi|550322031|gb|ERP52071.1| hypothetical protein
POPTR_0015s05590g [Populus trichocarpa]
Length = 424
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = +1
Query: 46 IDLLAFKDGVLLTRVCSDVYSFNFESRKMKKICKLVDLGRNSFYAPIVLPYAMSLVPL 219
+D LAFKDGVL+ R+ + +Y ++ ++ KM+++ + G S+ +PIVLPY MSLVPL
Sbjct: 320 MDPLAFKDGVLVVRISNTIYLYHVDTSKMEEVGETSKFGAMSWVSPIVLPYTMSLVPL 377
>ref|XP_006374273.1| hypothetical protein POPTR_0015s05590g [Populus trichocarpa]
gi|118481653|gb|ABK92768.1| unknown [Populus
trichocarpa] gi|550322030|gb|ERP52070.1| hypothetical
protein POPTR_0015s05590g [Populus trichocarpa]
Length = 384
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = +1
Query: 46 IDLLAFKDGVLLTRVCSDVYSFNFESRKMKKICKLVDLGRNSFYAPIVLPYAMSLVPL 219
+D LAFKDGVL+ R+ + +Y ++ ++ KM+++ + G S+ +PIVLPY MSLVPL
Sbjct: 320 MDPLAFKDGVLVVRISNTIYLYHVDTSKMEEVGETSKFGAMSWVSPIVLPYTMSLVPL 377